mRNA_P-littoralis_Contig13.153.3 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig13.153.3 vs. uniprot
Match: D7G160_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G160_ECTSI) HSP 1 Score: 686 bits (1771), Expect = 1.150e-222 Identity = 433/885 (48.93%), Postives = 533/885 (60.23%), Query Frame = 3
Query: 579 QLLELAKESMERHGQHADRRGADHLALVPEALECLKTILPLMNDKDIHNKEMLLSVFQLCEETVLAASDDCSEDDASSSRTLRMAKATVEAMLSHPRLDEVRTANCKERLDRYISEIDHLLQVLTK----SRRPANSGSGSDRNDEGDARNDEDEKPA-LRPSGWSEDIRAAAVKFCEELYMSLQPQTSDFERVDAVRKYAEKALRERFSEGRVSVFGSSAMQLSVPDSDIDLTIHLPSRAKLVQELKDNVESARNAVTAAEEDFPVAVKLLHQRVSMDAELQRLEGRVRGKKVDLEDMTRSKSRIAKRLKGLGAFQAERRRKDGAPAEATRAADIPNGGTASMSPPTPAEHQPPATRGAPLDGGSATMSGKAEGGGIESVPGGRTGSVPAPDVKTNSTADGDAGMAAPAPEGQFSGSSGDAGGSDSQEGGKLQTGYEPNGEKQKREDGQAKREDKDRAEAAILNGRLRHSEERIQETTKSIAQMQGALEKKRKAFAEWKAENFGSPPEEQKKAVDAVHKSRLSLEKSEQRLKATSKIVFEMKRVLERKGFTDVMAVHRSRVPVVKTCAPVFFWGRTGRPCLVDISVNNLVAVHNTRLVKAYTDLDPRCRRLLYLVKTWSKARGVNDSSKGTLSSYAHCVTVLHYLTRVGVIPSLLKEHPSLSKGGDGHESSPAVPDAAGNDILIEGIDVSFSQPTDPGLPQPHPLPPITPGVATPAADPTSTQSVPEEGKKEEQEXXXXXXXXXXXXXNTSSNVGEDTLAARDAEVCDLLLGYFRYCAEEFCHSK------QVMSLRPKSILNKADVWSRPKMWRTSVEDPFLTFDSTNPHDLGWVLTRPGQKLLREEWKRGHTLMQRG---AVGELLAPSDMV--RNPKNVPG 3185
++LE A+E M RH Q + RGA+H ALVPE LECL+ LPL+NDK +H+K LLSVFQLCEE VLAASDDCS+D+ RTL +AKA V ML+H RL EVRT+ C+ERLDRY+ EID LL+ L + S A SG G PA L + WSE+ R + CE+ +++L P TS +E V+ VR+ E ALR+RFS+ RV VFGSSAM LS P+SDIDLT++LPSR +L+QELK VES AV AEE AV+LL QR SM+ +L +L G RGK DL +T S+ + A++L + A R+ + E P E Q A GSAT + VP +P P T D D +DS++G Q EP E++DR E +L RL SE I+ + ++ + + A E+K+K +W ENF + +QKK V A+ K R SL K++Q LKATSKIVFEMKRV+ERKGFTDVMAVHRSRVPVVKTC P WG GRP DISVNNLVAVHNTRLVKAYTDLDPRC RLLYLVK W+KARGV DSSKGTLSSY HC+TVLHYLTRVGV+PSLLKEH S SK H + PA D + ++EGIDVSFS T+PG P PLP P T+ +++ + + S G + LA RDA +CDLLLGYFR+ AE+FCH+K QVM+LRPK+ILNKADVW+RPK+WRTSVEDPF TFDSTNPHDLG VL+R GQ LL +EWKRG+ +M++G A+ EL S PKNV G
Sbjct: 76 EVLERARELMARHKQDREHRGAEHFALVPEVLECLQIALPLINDKTLHDKAKLLSVFQLCEEAVLAASDDCSDDNDVCKRTLGLAKAVVVDMLAHKRLGEVRTSTCRERLDRYVQEIDDLLRRLDEQLIHSTDYARSGGGGASGG----------GPAPLLANTWSEEERTVMNQLCEQRFLALLPHTSYYETVEGVRQGVEWALRQRFSQARVLVFGSSAMSLSTPESDIDLTLYLPSRVELIQELKGVVESKTRAVLMAEEGQAHAVQLLKQRASMEDKLSKLNGTKRGKLNDLSALTLSRDKTAQKLHAMKAAHTARKTRK---LETXXXXXXXXXXXXXXXTPRSKEEQRHA--------GSATAA---------RVP------IPEPVACTAEDKDKDR--------------------NDSRDG---QRAAEP--------------EEEDR-EGVLLESRLAASERGIKTSRRAATEAEAAFEEKKKELGDWTKENFDNASPDQKKVVQAIIKCRASLAKAQQNLKATSKIVFEMKRVMERKGFTDVMAVHRSRVPVVKTCVPRRLWGPAGRPIECDISVNNLVAVHNTRLVKAYTDLDPRCHRLLYLVKAWAKARGVGDSSKGTLSSYGHCLTVLHYLTRVGVVPSLLKEHKSFSKEAGAHPTPPAF-DHGDSAFIVEGIDVSFSN-TNPGTLPPCPLP--VENHCPPLPRDTADRAIHGNASEADSNQGVADSYDTANDTTNGSRSGSEGLAVRDATICDLLLGYFRHLAEDFCHAKEQQRQQQVMTLRPKTILNKADVWARPKLWRTSVEDPFETFDSTNPHDLGTVLSRTGQTLLHQEWKRGYAVMKKGGSKAIPELFETSGRAAKNGPKNVAG 882
BLAST of mRNA_P-littoralis_Contig13.153.3 vs. uniprot
Match: A0A6H5K7K2_9PHAE (NTP_transf_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7K2_9PHAE) HSP 1 Score: 682 bits (1760), Expect = 2.640e-218 Identity = 444/937 (47.39%), Postives = 545/937 (58.16%), Query Frame = 3
Query: 579 QLLELAKESMERHGQHADRRGADHLALVPEALECLKTILPLMNDKDIHNKEMLLSVFQLCEETVLAASDDCSEDDASSSRTLRMAKATVEAMLSHPRLDEVRTANCKERLDRYISEIDHLL----QVLTKSRRPANSGSGSDRNDEGDARNDEDEKPALRPSGWSEDIRAAAVKFCEELYMSLQPQTSDFERVDAVRKYAEKALRERFSEGRVSVFGSSAMQLSVPDSDIDLTIHLPSRAKLVQELKDNVESARNAVTAAEEDFPVAVKLLHQRVSMDAELQRLEGRVRGKKVDLEDMTRSKSRIAKRLKGLGAFQAERRRKDGAPAEATRAADIPNGGTASMSPPTPAEHQPPATRGAPLDGGSATMSGKAEGGGIESVPGGRTGSVPAPDVKTNSTADGDAGMAAPAPEGQFSGSSGDAGGSDSQEGGKLQTGYEPNGEKQKREDGQAKREDKDRAEAAILNGRLRHSEERIQETTKSIAQMQGALEKKRKAFAEWKAENFGSPPEEQKKAVDAVHKSRLSLEKSEQRLKATSKIVFEMKRVLERKGFTDVMAVHRSRVPVVKTCAPVFFWGRTGRPCLVDISVNNLVAVHNTRLVKAYTDLDPRCRRLLYLVKTWSKARGVNDSSKGTLSSYAHCVTVLHYLTRVGVIPSLLKEHPSLSKGGDGHESSPAVPDAAGNDILIEGIDVSFSQPTDPGLPQPHPLPPITPGVATPAADPTSTQSVPEEGKKEEQEXXXXXXXXXXXXXNTSSN---VGEDTLAARDAEVCDLLLGYFRYCAEEFCHSKQVMSLRPKSILNKADVWSRPKMWRTSVEDPFLTFDSTNPHDLGWVLTRPGQKLLREEWKRGHTLMQRG---AVGELLAPSDMV--RNPKNVPG-----------NRRAGRGXXXXXXXXXXXXNNAPNKSGQGRGGKLWTSADGTGRGH 3320
+LLE A+E M RH Q + RGA+H+ALVPE LECL+ LPL+N+K +H+K LLSVFQLCEE VLAASDDCS+D+ +RTL +AKA V ML+H RL EVRT+ C+ERLDRY+ EID LL ++LT S A SG G L + WSE+ R + CE +++L P TS +E V+ VR+ E ALR+RFS+ RV VFGSSAM LS P+SDIDLT+HLPSR +L+QELK VES AV AEE AV+LL QR SM+ +L +L G RGK DL +T S+ + A++L A +A P + Q P R G+AT + VP P+ + D D +DS++G Q EP E++DR E +L +L E I+ + ++ + + A E+K+K +W ENF + EQKK V A+ K R SL K++Q LKATSKIVFEMKRV+ERKGFTDVMAVHRSRVPVVKTC P WG GRP DISVNNLVAVHNTRLVKAYTDLDPRC RLLYLVK W+KARGV DSSKGTLSSY HC+TVLHYLTRVGV+PSLLKEH S SK G + +P D ++EGIDVSFS+ LP P PLP G P T G E + N ++N G + LA RDA +CDLLLGYFRY AE+FCH+K+VM+LRPK+ILNKADVW+RPK+WRTSVEDPF TFDS NPHDLG VL+R GQ LL ++WKRG+ +M++G A+ EL D PKNVPG R AG G +A K G GR LW+ AD G H
Sbjct: 80 ELLERARELMARHKQDREHRGAEHVALVPEVLECLQIALPLINEKRLHDKAKLLSVFQLCEEAVLAASDDCSDDNDVCTRTLGLAKAVVVDMLAHKRLGEVRTSTCRERLDRYVQEIDDLLWRLDEMLTHSTGNARSGGGGASGGG---------PVPLLANPWSEEERTVMNQLCEHRFLALVPHTSYYETVEGVRQGVEWALRQRFSQARVLVFGSSAMSLSTPESDIDLTLHLPSRVELMQELKGVVESKTRAVLMAEEGQAHAVQLLKQRASMEDKLSKLNGTKRGKLNDLSALTLSRDKSAQKLH---AMKAAHXXXXXXXXXXXXXXXXXXXXXXXXQTPRSKDEQQPTQR----PTGAATAA-----------------RVPNPEPVACAAEDKDKDR------------------NDSRDG---QRAAEP--------------EEEDR-EVVLLESKLAARERGIKTSRRAATEAEAAFEEKKKELEDWTKENFDNASPEQKKVVQAIIKCRASLAKAQQNLKATSKIVFEMKRVMERKGFTDVMAVHRSRVPVVKTCVPRRLWGPAGRPIECDISVNNLVAVHNTRLVKAYTDLDPRCHRLLYLVKAWAKARGVGDSSKGTLSSYGHCLTVLHYLTRVGVVPSLLKEHKSFSKEA-GAQPTPRAFDHGDGAFIVEGIDVSFSKINSEALP-PCPLP----GENHSPPLPRDTAGRAIHGNASEADSNQAVADSYPDVANDTANGSRSGSEGLAIRDATICDLLLGYFRYLAEDFCHAKEVMTLRPKTILNKADVWARPKLWRTSVEDPFETFDSINPHDLGTVLSRTGQTLLHQQWKRGYAIMKKGGSKAIQELFETCDRAAKNGPKNVPGLAKKDGGGARGGRVAGTGNGRSTAVQGREHQHA--KRGAGR---LWSPADANGSHH 936
BLAST of mRNA_P-littoralis_Contig13.153.3 vs. uniprot
Match: A0A5B8MNN5_9CHLO (Uncharacterized protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MNN5_9CHLO) HSP 1 Score: 106 bits (265), Expect = 1.790e-19 Identity = 59/138 (42.75%), Postives = 87/138 (63.04%), Query Frame = 3
Query: 2175 IVFEMKRVLERKGFTDVMAVHRSRVPVVKTCAPVFFWGRTGRPCLVDISVNNLVAVHNTRLVKAYTDLDPRCRRLLYLVKTWSKARGVNDSSKGTLSSYAHCVTVLHYLTRV--GVIPSLLKEH---PSLSKGGDGHE 2573
+V +M R+L R + V+ + ++RVP+VK P TG C DI VNNL+AV NT L++ Y+++DPR + L+ L+K WSK RGVN + KGTLSSYA+ + V+H L + ++P L +H P++ K DG E
Sbjct: 484 VVKQMARLLRRNRMSKVIPIPKARVPIVKFIEP-----ETGIEC--DICVNNLLAVENTSLLRKYSEIDPRLKELVILIKHWSKCRGVNGAFKGTLSSYAYVIMVIHLLQTIQPAILPCLQDDHQYIPTVDKEVDGWE 614
BLAST of mRNA_P-littoralis_Contig13.153.3 vs. uniprot
Match: A0A1Y2CZS9_9FUNG (Polynucleotide adenylyltransferase n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2CZS9_9FUNG) HSP 1 Score: 99.4 bits (246), Expect = 1.060e-18 Identity = 58/140 (41.43%), Postives = 87/140 (62.14%), Query Frame = 3
Query: 2130 LSLEKSEQRLKATS-KIVFEMKRVLERKGFTDVMAVHRSRVPVVKTCAPVFFWGRTGRPCLVDISVNNLVAVHNTRLVKAYTDLDPRCRRLLYLVKTWSKARGVNDSSKGTLSSYAHCVTVLHYLTRVGVIPSLLKEHPS 2546
LS+ SE LK TS ++V ++ V++ G DV + R+RVP+VK P+ TG C DI + + ++NTRL+KAY+ +DPR R L+++VK WSK R +N+ GTLSSY + ++H+L GV+P L K P+
Sbjct: 3 LSISLSENYLKLTSPQLVEKLGAVMKNAGMRDVKMLTRARVPIVKIRDPI-----TGIRC--DIGFQSSLVMYNTRLLKAYSQIDPRFRELVFIVKYWSKQRNINEPYFGTLSSYCFVLMIIHFLQVRGVLPCLQKIAPN 135
BLAST of mRNA_P-littoralis_Contig13.153.3 vs. uniprot
Match: A0A5P1FNK7_ASPOF (Uncharacterized protein n=2 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1FNK7_ASPOF) HSP 1 Score: 97.4 bits (241), Expect = 5.040e-17 Identity = 53/135 (39.26%), Postives = 85/135 (62.96%), Query Frame = 3
Query: 2169 SKIVFEMKRVLERKGFTDVMAVHRSRVPVVKTCAPVFFWGRTGRPCLVDISVNNLVAVHNTRLVKAYTDLDPRCRRLLYLVKTWSKARGVNDSSKGTLSSYAHCVTVLHYLT--RVGVIPSLLKEHPSLSKGGDG 2567
S+I+ ++ +LE +V A+ R+RVP+VK PV TG C DI +NNL+AV NT+L++ Y +D R R+L ++VK W+K+RGVN++ +GTLSSYA+ + +H+L + ++P L + + DG
Sbjct: 242 SEILLKLADILESDNLQNVQALTRARVPIVKMMDPV-----TGISC--DICINNLLAVANTKLLRDYAQIDERLRQLAFIVKHWAKSRGVNETYRGTLSSYAYVLMCIHFLQQRKPAILPCLQEMEATYLANVDG 369
BLAST of mRNA_P-littoralis_Contig13.153.3 vs. uniprot
Match: A0A0L0HES3_SPIPD (Polynucleotide adenylyltransferase n=1 Tax=Spizellomyces punctatus (strain DAOM BR117) TaxID=645134 RepID=A0A0L0HES3_SPIPD) HSP 1 Score: 97.4 bits (241), Expect = 1.640e-16 Identity = 52/118 (44.07%), Postives = 78/118 (66.10%), Query Frame = 3
Query: 2178 VFEMKRVLERKGFTDVMAVHRSRVPVVKTCAPVFFWGRTGRPCLVDISVNNLVAVHNTRLVKAYTDLDPRCRRLLYLVKTWSKARGVNDSSKG-TLSSYAHCVTVLHYLTRVGVIPSL 2528
++ + RVL R G V+ V +RVP+ K F+ ++ C DI+ N++ VHN+RL+K YT++DPR + L+ LVK W+K R VNDS+ G T+SSYA+ + +L+YL G+IPSL
Sbjct: 362 MYRLARVLRRNGMQQVVPVQGARVPICK-----FYDPKSELHC--DINFGNVLGVHNSRLLKTYTEIDPRVKPLIMLVKLWAKNRDVNDSADGATISSYAYSLMILNYLQLRGIIPSL 472
BLAST of mRNA_P-littoralis_Contig13.153.3 vs. uniprot
Match: A0A1Q3C8T4_CEPFO (PAP_assoc domain-containing protein n=1 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3C8T4_CEPFO) HSP 1 Score: 96.3 bits (238), Expect = 2.480e-16 Identity = 50/122 (40.98%), Postives = 80/122 (65.57%), Query Frame = 3
Query: 2169 SKIVFEMKRVLERKGFTDVMAVHRSRVPVVKTCAPVFFWGRTGRPCLVDISVNNLVAVHNTRLVKAYTDLDPRCRRLLYLVKTWSKARGVNDSSKGTLSSYAHCVTVLHYLT--RVGVIPSL 2528
S ++ ++ +L+ DV A+ R+RVP+VK PV TG C DI +NN++AV NT+L++ Y +D R R+L Y+VK W+K+RGVN++ +GTLSSYA+ + +++L R ++P L
Sbjct: 426 SDVLLKLADILQSDNLQDVQALARARVPIVKLMDPV-----TGISC--DICINNVLAVVNTKLLRDYAQIDERLRQLAYIVKHWAKSRGVNETYRGTLSSYAYVIMCIYFLQQRRPAILPCL 540
BLAST of mRNA_P-littoralis_Contig13.153.3 vs. uniprot
Match: A0A7J8XN17_GOSAI (Uncharacterized protein n=2 Tax=Gossypium TaxID=3633 RepID=A0A7J8XN17_GOSAI) HSP 1 Score: 95.5 bits (236), Expect = 2.640e-16 Identity = 50/122 (40.98%), Postives = 81/122 (66.39%), Query Frame = 3
Query: 2169 SKIVFEMKRVLERKGFTDVMAVHRSRVPVVKTCAPVFFWGRTGRPCLVDISVNNLVAVHNTRLVKAYTDLDPRCRRLLYLVKTWSKARGVNDSSKGTLSSYAHCVTVLHYLT--RVGVIPSL 2528
S+I+ ++ +L+ +V A+ R+RVP+VK PV TG C DI +NN++AV NT+L++ Y +D R R+L ++VK W+K+RGVN++ +GTLSSYA+ + +H+L R ++P L
Sbjct: 292 SEILLKLADILQSDNLQNVQALTRARVPIVKLMDPV-----TGISC--DICINNVLAVVNTKLLRDYAQIDARLRQLAFIVKHWAKSRGVNETYRGTLSSYAYVLMCIHFLQQRRPAILPCL 406
BLAST of mRNA_P-littoralis_Contig13.153.3 vs. uniprot
Match: A0A7S1A385_NOCSC (Hypothetical protein (Fragment) n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1A385_NOCSC) HSP 1 Score: 96.7 bits (239), Expect = 2.680e-16 Identity = 52/117 (44.44%), Postives = 71/117 (60.68%), Query Frame = 3
Query: 2211 GFTDVMAVHRSRVPVVKTCAPVFFWGRTGRPCLVDISVNNLVAVHNTRLVKAYTDLDPRCRRLLYLVKTWSKARGVNDSSKGTLSSYAHCVTVLHYLTRVGVIPSLLKEHPSLSKGG 2561
GF V V +RVPV+K ++ VDIS NN + +HN+RL++AY DLDPR L LVK W++ R VND+ +GTLSSY+H + V+HYL VG++P+L GG
Sbjct: 318 GFDVVELVVDARVPVLKC--------KSREGVAVDISFNNQLPLHNSRLLRAYADLDPRVADLGRLVKWWARCRRVNDAKEGTLSSYSHVLLVIHYLQHVGLVPNLQDRAVFQENGG 426
BLAST of mRNA_P-littoralis_Contig13.153.3 vs. uniprot
Match: A0A7J9JK93_9ROSI (TUTase domain-containing protein (Fragment) n=1 Tax=Gossypium armourianum TaxID=34283 RepID=A0A7J9JK93_9ROSI) HSP 1 Score: 95.5 bits (236), Expect = 2.760e-16 Identity = 50/122 (40.98%), Postives = 81/122 (66.39%), Query Frame = 3
Query: 2169 SKIVFEMKRVLERKGFTDVMAVHRSRVPVVKTCAPVFFWGRTGRPCLVDISVNNLVAVHNTRLVKAYTDLDPRCRRLLYLVKTWSKARGVNDSSKGTLSSYAHCVTVLHYLT--RVGVIPSL 2528
S+I+ ++ +L+ +V A+ R+RVP+VK PV TG C DI +NN++AV NT+L++ Y +D R R+L ++VK W+K+RGVN++ +GTLSSYA+ + +H+L R ++P L
Sbjct: 436 SEILLKLADILQSDNLQNVQALTRARVPIVKLMDPV-----TGISC--DICINNVLAVVNTKLLRDYAQIDARLRQLAFIVKHWAKSRGVNETYRGTLSSYAYVLMCIHFLQQRRPAILPCL 550 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig13.153.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig13.153.3 >prot_P-littoralis_Contig13.153.3 ID=prot_P-littoralis_Contig13.153.3|Name=mRNA_P-littoralis_Contig13.153.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1216bp MILSVILSWPAFRNRIRSCTRNEDTQKSHHIKNQRSPQLGNPAASHRAQTback to top mRNA from alignment at P-littoralis_Contig13:787890..830818+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig13.153.3 ID=mRNA_P-littoralis_Contig13.153.3|Name=mRNA_P-littoralis_Contig13.153.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=42929bp|location=Sequence derived from alignment at P-littoralis_Contig13:787890..830818+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig13:787890..830818+ >mRNA_P-littoralis_Contig13.153.3 ID=mRNA_P-littoralis_Contig13.153.3|Name=mRNA_P-littoralis_Contig13.153.3|organism=Pylaiella littoralis U1_48|type=CDS|length=3648bp|location=Sequence derived from alignment at P-littoralis_Contig13:787890..830818+ (Pylaiella littoralis U1_48)back to top |