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Homology
BLAST of mRNA_P-littoralis_Contig1281.16.5 vs. uniprot
Match: D8LHS0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHS0_ECTSI) HSP 1 Score: 314 bits (805), Expect = 1.030e-86 Identity = 240/663 (36.20%), Postives = 340/663 (51.28%), Query Frame = 3
Query: 267 ISPTNFAWHVNNATMNGPLAVGDSHQPEGLNNGGKNTNIMSESTLQRVAEGFREHGVRQKKATAMVATPADKQHATPREWLEGYRVAL-ELLPRPNPQPDYGDQ-----------------------------DFPDHLAFHSARPALITPQGQNRACMAIIALGPGLKLPLDRAGEFGSSKLFDDDGDGTKLDTLRKALQHPQAVLSMTVYDHLTFMDAADKGSSLHHAEEMSRKPKHYALIVRMGRLVRQVFVNGNGGREVGFAEEVLGKGWRAVLHKQRG-HATTNDTKNA-VALQKKLASYVAQEMERG---LKAVKGRSWETLVYSHALEISVHIVTTIMTRFYQEDDPEAFELANLGAGSKPLPECLVQLFGLLEATQQTDFISKAVAASGLVNKTKTKALTEANTDILRMISLTLALGQCSGKAICSKEDVPLPAEGIVGLLPTFVTPAQIVQFSNDNGKLQDVLISILGESWNTFKKKAKVCDKRGSQSTVYAAINKQGLAVAFGNKNKSNVSPGLGRMPILSTCCLRLAFDHKVMGQFLLHSA----DKEEVKDARYLAVEFSMLCVDHVAPGPISSFERLWEELDPNGFLKKNIMAQPTILDMK-GKPFFDKERAAIIAA--------AGNGASPGTEGS-KQEDHLDKNDAD 2108
ISP HV+N++MNGP GDS N GKN+NIM+E TLQ VA+ F G + +ATAMVA P+ + A PR W Y A+ E L P Q + +Q D F SA P+LITPQGQNRA MA+IAL L PL RAGEFG S LF +D L+ L K L A + VY+ L + AA+KG++LH E SRKP H+A+I +GRLVR + N +A+EV+G GWR LH T N + A VA K+ ++ +++ G L+ +KG SWE+LVY L+ I+ IM RF++ED+ + A SKPLP+CL FGLL TQ + ++ + G+VN K AL E + D++RM++L++A G +A+ + + + EG LLPTFV+P + F D+GK + L+ +L W K + +++ AINK+ L+ G NK+ +PG G+ +S R+ FD V+ FLL DK K AR LAVEF+MLCV+ V + F+ + LD N ++K + P + G+ FFD+ R + +A+ G S G GS ++E+ +D D D
Sbjct: 14 ISPKTLVRHVDNSSMNGP-ETGDS------TNLGKNSNIMTEKTLQHVAQQFT--GGFKFEATAMVACPSRRTWAHPRAWCTVYNEAVREHLSGPE-QAEVKEQLETAIGEALAEGTDLSWETALAATTWPNDDVLPSKEFVSAAPSLITPQGQNRAAMAVIALAGDLGCPLSRAGEFGQSNLFPEDSAAKTLE-LAKVLTGEHAKFQVNVYNFLDYAAAAEKGTNLHKGESQSRKPGHFAVISGLGRLVRALN-NPELRLCEEYAKEVMGDGWRRNLHPMGSVDGTRNKAEQATVAAAWKVLNFHVKKILEGEGALRKMKGNSWESLVYGKGLDEDSPIIKAIMARFWKEDELNGLD----SAASKPLPQCLTACFGLLRTTQASPKLAAVILEHGIVNSVKDFALDEGHLDVVRMLALSIAGGAL--RAVDGENRMVV--EGAAALLPTFVSPEEQALFEADDGKRKKQLLDVLETYW-----KPVIYALGSNKNKFVTAINKKALSGRIGQSNKTVTTPGPGKPLHISIDASRVEFDQAVVTTFLLFEGTQEKDKVNSKLARQLAVEFAMLCVERVLDDR-TKFDAFFGALDKNSWVKNVLQTNPASWQSRQGEKFFDEARLSAMASKKPESGKGGGGTTSTGHGGSAEREESVDSGDGD 650
BLAST of mRNA_P-littoralis_Contig1281.16.5 vs. uniprot
Match: D7FRB5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRB5_ECTSI) HSP 1 Score: 280 bits (716), Expect = 1.880e-75 Identity = 237/719 (32.96%), Postives = 325/719 (45.20%), Query Frame = 3
Query: 360 NGGKNTNIMSESTLQRVAEGFREHGVRQKKATAMVATPADKQHATPREWLEGYRVALELLPRPNPQ---------------------PDYGDQ--------------DFPDHLAFHSARPALITPQGQNRACMAIIALGPGLKLPLDRAGEFGSSKLFDDDGDGTKLDTLRKALQHPQAVLSMTVYDHLTFMDAADKGSSLHHAEEMSRKPKHYALIVRMGRLVRQVFVNGNGGREVGFAEEVLGKGWRAVLHKQRGH----ATTNDTKNAVALQKKLASYVAQEMERG----LKAVKGRSWETLVYSHALEISVHIVTTIMTRFYQED------------DPEAFELANLGAGSKPLPECLVQLFGLLEATQQTDFISKAVAASGLVNKTKTKALTEANTDILRMISLTLALGQC-----SGKAICSKEDVPLPAEGIVGLLPTFVTPAQIVQFSNDNGKLQDVLISILGESWNTFKKKAKVCDKRGSQSTVYAAINKQGLAVAFGNKNKSNVSPGLG-RMPI-LSTCCLRLAFDHKVMGQFLLHSADKEE-------------------------------VKDARYLAVEFSMLCVDHVAPGPISSFERLWEELDPNGFLKKNIMAQPTILDMKG----KPFFDKERAAIIAAAGNGASP--GTEGSKQEDHLDKNDA---------DKRTSRIQINLADGETFLTDLPMDMVSAL 2192
N GKNTN+MSE TLQ V GF G + ++TAMVA PA + H TPR W R A+ L + Q P + DF D++ P LITPQGQNRA M I+ LGP L L RAGEFG S LF+ D + +K + L+ AL P+A+ + VY+HL + D KG +LH E SRKP HYAL R+G +V+QV +N + FA EV+G GWR L+ G +T +T+ + ++L+SYV + + K KG+ WETLVY+ AL + IV I+ R YQED D + + S P PE + LF LL TQ + + +A GLVN TKT A+ E+ TDILR ++A G G CS PA + LLP+FV + F+ +NG L L + L WN FK K INK+ + NK+ PG G + + +ST + + FD + G FL + + +E K AR LA+EFSML V V ++ F LW LD G LK + P+ LD FF ++R II A G P G E + +D + + D + I+L +G TF + M+ V++L
Sbjct: 11 NRGKNTNVMSERTLQTVCSGF--IGGVKMESTAMVACPALEIHRTPRLWCIAARKAIGHLSKTCAQEAAEAKRMLSAIKAAEESVEGPSWSTALDGTTWRGEGCPSGDFTDNM------PKLITPQGQNRAAMCIMVLGPELGLSSARAGEFGESALFESDSE-SKTEQLKTALSCPKALFCVNVYNHLGYSDCMAKGDNLHTGETESRKPAHYALFRRLGYVVQQV-MNPSTTVYDAFAIEVMGPGWRDKLYPGGGDTPSPSTQEETRGVNKMFQRLSSYVNRTLVDAPALRCKTNKGKQWETLVYAIALHPNRPIVKAIVERLYQEDQSYDEDQSVSNEDGDKKKARRFTRSSDPKPEAIQALFSLLPRTQGLPRVLETIAEKGLVNATKTLAVEESTTDILRAFCQSVARGSFIIPSGQGTVGCST-----PARSVEDLLPSFVDEGHVDMFAANNGSLSSKLQNTLETCWNAFKPHVK-------SPEGLLGINKKPVLGFLSASNKTVTVPGKGDKCEVHISTSSVPIEFDSALTGHFLSYEEEVQEGVRGKKDAPEGTPGTKKSPEELEKARERCLLKKKARRLAIEFSMLIVQQVLEVDVAKFSLLWGALDGKGILKTTLQNTPSALDTGNGGQISSFFYQDRLDIIHGATAGKVPMAGAEEEQLDDGAEMQEEMGEGLGTGNDTSVDNVLIDLGNGVTFTGRVSMNDVTSL 707
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Stop | 1 |
| Start | 1 |
| Model size | 3828 |
| Hectar predicted targeting category | other localisation |
| Exons | 9 |
| Cds size | 2766 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680789572.140591-UTR-P-littoralis_Contig1281:18191..18379 | 1680789572.140591-UTR-P-littoralis_Contig1281:18191..18379 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig1281 18192..18379 + |
| 1680789572.2392182-UTR-P-littoralis_Contig1281:30191..31065 | 1680789572.2392182-UTR-P-littoralis_Contig1281:30191..31065 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig1281 30192..31065 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680789572.1493707-CDS-P-littoralis_Contig1281:18379..18748 | 1680789572.1493707-CDS-P-littoralis_Contig1281:18379..18748 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1281 18380..18748 + |
| 1680789572.1578293-CDS-P-littoralis_Contig1281:22683..22867 | 1680789572.1578293-CDS-P-littoralis_Contig1281:22683..22867 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1281 22684..22867 + |
| 1680789572.168395-CDS-P-littoralis_Contig1281:23590..23730 | 1680789572.168395-CDS-P-littoralis_Contig1281:23590..23730 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1281 23591..23730 + |
| 1680789572.1787653-CDS-P-littoralis_Contig1281:25542..25896 | 1680789572.1787653-CDS-P-littoralis_Contig1281:25542..25896 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1281 25543..25896 + |
| 1680789572.1887033-CDS-P-littoralis_Contig1281:26563..27428 | 1680789572.1887033-CDS-P-littoralis_Contig1281:26563..27428 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1281 26564..27428 + |
| 1680789572.19884-CDS-P-littoralis_Contig1281:27912..28105 | 1680789572.19884-CDS-P-littoralis_Contig1281:27912..28105 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1281 27913..28105 + |
| 1680789572.2094026-CDS-P-littoralis_Contig1281:28334..28436 | 1680789572.2094026-CDS-P-littoralis_Contig1281:28334..28436 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1281 28335..28436 + |
| 1680789572.2199013-CDS-P-littoralis_Contig1281:29426..29582 | 1680789572.2199013-CDS-P-littoralis_Contig1281:29426..29582 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1281 29427..29582 + |
| 1680789572.2289035-CDS-P-littoralis_Contig1281:29788..30191 | 1680789572.2289035-CDS-P-littoralis_Contig1281:29788..30191 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1281 29789..30191 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1281.16.5 >prot_P-littoralis_Contig1281.16.5 ID=prot_P-littoralis_Contig1281.16.5|Name=mRNA_P-littoralis_Contig1281.16.5|organism=Pylaiella littoralis U1_48|type=polypeptide|length=922bp
MSVDVLARKAATARAAREKGLLNDTHISPTNFAWHVNNATMNGPLAVGDS HQPEGLNNGGKNTNIMSESTLQRVAEGFREHGVRQKKATAMVATPADKQH ATPREWLEGYRVALELLPRPNPQPDYGDQDFPDHLAFHSARPALITPQGQ NRACMAIIALGPGLKLPLDRAGEFGSSKLFDDDGDGTKLDTLRKALQHPQ AVLSMTVYDHLTFMDAADKGSSLHHAEEMSRKPKHYALIVRMGRLVRQVF VNGNGGREVGFAEEVLGKGWRAVLHKQRGHATTNDTKNAVALQKKLASYV AQEMERGLKAVKGRSWETLVYSHALEISVHIVTTIMTRFYQEDDPEAFEL ANLGAGSKPLPECLVQLFGLLEATQQTDFISKAVAASGLVNKTKTKALTE ANTDILRMISLTLALGQCSGKAICSKEDVPLPAEGIVGLLPTFVTPAQIV QFSNDNGKLQDVLISILGESWNTFKKKAKVCDKRGSQSTVYAAINKQGLA VAFGNKNKSNVSPGLGRMPILSTCCLRLAFDHKVMGQFLLHSADKEEVKD ARYLAVEFSMLCVDHVAPGPISSFERLWEELDPNGFLKKNIMAQPTILDM KGKPFFDKERAAIIAAAGNGASPGTEGSKQEDHLDKNDADKRTSRIQINL ADGETFLTDLPMDMVSALLSNRGRTFLSDNGGISVIDPGDSRQDPKKRKA TIASNDSDKHGPVTTSPTGTSLAKRRKVSGTELGERPPGGDHRKNYVKST TTNFSEASDDDEEGEDLNSFLKSPAPANIDETLLGTKISCVLKAIESCKT HFAGATPKEAEIKTYLKKSMGRDNFRHVNLAATAQLELNQTSAYVFTPDV VRNTTTPTLDDLRLSNKGRYIFTTGCGFGSLFDLVAQQFGTTFPIKACET SRVWRRTGADLGRTRNNRLQR* back to topmRNA from alignment at P-littoralis_Contig1281:18192..31065+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig1281.16.5 ID=mRNA_P-littoralis_Contig1281.16.5|Name=mRNA_P-littoralis_Contig1281.16.5|organism=Pylaiella littoralis U1_48|type=mRNA|length=12874bp|location=Sequence derived from alignment at P-littoralis_Contig1281:18192..31065+ (Pylaiella littoralis U1_48) GGGGGTTCCGTTTCGTCCAGAAAAAAATAAAAGCTGTATCTTCATTTCTT
GAAACATACTGGTACAAAATACCTTTGAAAAAAATAAATAATGATAAACC
TGCCATGAGAGGGGCCACCTACACATCATAAACAAAACGCGCTCAGAACT
CAAAAGCAACGCGTGCAATATCGGCTTCTATCGTAATCATGTCAGTCGAC
GTCCTAGCTCGCAAGGCCGCCACGGCCCGCGCTGCTCGAGAGAAAGGATT
GCTGAATGACACGCACATTTCGCCAACGAACTTCGCTTGGCACGTGAACA
ACGCCACGATGAATGGACCTCTAGCAGTAGGCGACTCCCACCAACCCGAG
GGACTCAACAACGGGGGCAAGAATACCAACATCATGTCGGAGAGCACCCT
GCAGCGGGTGGCTGAGGGCTTTCGCGAACACGGCGTACGACAAAAAAAAG
CGACAGCCATGGTCGCGACTCCGGCGGACAAGCAGCATGCCACACCACGA
GAATGGCTGGAGGGCTACCGAGTCGCTCTCGAACTACTTCCGAGGCCGAA
CCCGCAGGTGAGAGGCAAAAACATTATGTCAAATCACACAGCAATCAATC
GTGTGGTGGGTGTTATCGTCCGGACAAAACTACACACCGAAGGAAGGTCA
CACACGAGTTTTTTTGTAGATTTCTTTTTTGGTTGTATTGACCATAAGCC
TAACCCCACGTGCAATACTACAGAAGACACATACGTACCACATGAAATAT
TCCCTGCAGCAGTCAGGATCAGTACTACAAGGGAGATCAGTACTACAAGG
GAGAGACACTATGCCGTAGTCTACGCATGCCTCATACACCCCATGAAATA
CTAGAAATTCTGTTGATGAAGCGATCCGAAGGGACACACATCATATTTAC
GAAGTAGTATTGCGCATGTTTTTTCGAACAAGAAAGTGGATTGATACGCA
TCTTCCTGAATTTGGTCACTCACTGCAGCGCGGACCACGGAAGGAAGGCG
TCCGTTGTCGCATGTATAGTCCGAGTCAAAAGGATGAAGTTGTTGAGGCT
ATCAAACGCAGAGTATATTATACTCCGGAGTGTGTTGGACTCCTCGACAT
AATTATAGCACCTGTGATTATAGTACTTTTCGTTGGAGAGTAAGTAAGGT
AGGTGCACACATGCATGCATGTACTTCGTAACCGGGCCACAGAGGATAAA
GGAAGAACGAAAGTTGTTGCTGTCGTTGATTCTCACATAAGCTCACTACC
GCCGCAGTCTAGCCAGTGGTCAAAAACCAGGCACACATCGTGCTAGGAGG
AAAAAAATAAAAAACAAAATATGTGGACCATGATCACCCGCAGTCAGATC
AGACGTGGTACCGTTGGGGTACCATCTGTGGTGGCCAGAATACCAAACAA
GTACAGAACGATAATAACAAAttTTTATGTTGTTGTTGTTGTTGTTGTTG
TTGTTGTTTTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTT
GTTGTTGTTGGTAGGTAGTCTACTTGGGGACGGATGCAAAATCTACAGAT
GATCCTGTAGCCAGCAACATAAAAACACCACTTCAAGGATGAGGGAAACA
GCCCAAATATATATAGATTTCAAAAAGAGTGCAATACAACGTGATGAAAC
GTGTTTCACACAAGACGACCACCAAATTGTTTTGTTGACCTGGATACCCT
CAACGGTACATTATTATCTGATGAGTATAGAAACACTGGTAGGCGTATTT
TTTAACTTGTGTTGGTTGCAATACTTGCTCCAAATCCTTGCCCGGAGAGA
GGCGAACACATTATTCATTCATGATTTTGTAAGTTTCAAAACGAAGGATG
GACAGCGCTTCGTAATCTTATATCGACCATAATGGAACATAATATTATAT
ATATGTACATCTGTGCACAGAGTAGACAAGATGTGAATCCGTAGGAGATG
TATGTGTGTTCGATACTTCTGTATCGAATGTACTCGGAGTACAAGGTAGT
GACCACACGTGTACCTGTTTGTTGTCATCTTATCTGTCGTGGAAGGTATT
TTTTCGCTATGATGAGGAGGGTGCATCAGCCGGGGTCACACTTTTTGGTT
TGTTTTCCTACTGTCCAAACCTTCCCCATGCGGTACATGCCCTGTGGTTT
TAAGTGAGAATCGGGTACAGAAACCCTTCCCTTTCCTTGTTTGTGAGTAA
TTCGTTTTCCACATCTCTAACTGTAAAGTCGCAAGAAACGTTTTCAATGT
TTATTTGTGTTGGTTGAAATATCTGCTCCAGATCCTTGTGAACACATTAT
TAATGTTTTTGTGAGTTTCAAAAGAAAGAAATACATGTTGTATTTACATA
ACCTTACATTCAGCAGATCAACGAGGACCCCTGTGTTGGCGGGCCGTCGG
TTTTTGAATGTTTTATATTCGTATCATATGATATTATCATGATCTACGAT
TGATTGATATGTCTGTACGTGTAGCTGTTCAAGGAGAAAAGTAGCATTTA
TGAAAGACTGTCTATGGGTAGAGAATATCTCCCCAGGTCCCCAGGTACGC
TTCATAGGAGATGCGTTCAGACCCTTCCCCTGCTCACGATGTTCGTCCTA
ATTTCGTCTGCCGGCGACCATTCTCCTTGCACGTCATTTATCGCCAGCTA
GGTGTCATCTCTCGGCAACGAATCCCCGGTTCTAAACCTATATCGACGTG
GGTCTGGGTTTTCGTGAGTAACAACAAAGAACTACACCGTACGCCACATT
ATTACACGCCTGCTCAGGTATCGGTGTTGGGACACAAACACAGCAGCATA
TTCAATAGATTTGGCAGTATTTTATCTTATTTGATCATGTCGGATACCAC
AACACGCCAGCACCAAGCAGAACTCGACCCCCATGAACACCAATCAAGAT
TAGAACAAACTACTAATGTTGAAGGGTACTGCATATTACAGTGTATTTTA
TTTTTTGGGGGGGGAGCGGTCTCTGGTGCTGTCTGCTCCTGTTGTGCCAA
AACCTTCGTCTCATTATTCAGCAGTCTCGGCACCATGACCTGTTCGATTA
GAACAGAGGTATTCTCAAGGTTTGTGTTCACTAGAGAAAACAAAGATTTC
TGTGAAAGCAGGGGTCCTGATTAAAGTGCGCCTTGTGGATTACTCACTGA
TGTCCTCACGCTCTCCCTGCTCTCGTTTAAGATTATTAGCGGCAATGGGT
GTGATAAAAGCCAGGAGCCGGAATCGACCGAGTTTTGAAAACCTGGCATC
GACACCAAAACATGGTGGTTGATATCGCTATCAATATCATATCGGTGTAG
TACCGTATCAATATCGGCTACTTTCTCGAATATTGCCAAAATACTAGATA
TCACCTTTTTCCGTTCGTGTGATAATCAAATATCGCATAAGGTCGTCATT
GAATTTATATCCCATCACCGGTGGATGACATTATGTACGGGGCGTGGGTG
GTAGTTTGTGTATTCACGTGTCAAGCGCCGGCTAACCCAGGTGGTTTTAT
GTTCATGTGCCGGGACAGGCCGTTTTTTTTGCACGTGCCGGGATGATCGG
TAGTGCCTTTTTTTTTCGAAATTGCCCGGAACGTAACGGTTGTTTAACTT
TTTTTTCCCGGGACGGGCAAGATTCATCACCCCCCGGGAATCCCGGGATT
AACTATCCCGGCACCAGTCCATGTCTGACCATAGCGTTTCTAGCAGGAAG
ACCAAGTTTTATTGGTGCCAAAAATACTTTTTCCCTTCCTTCAATTTACA
CACAGCAGTGCGTTCAGTATCTGACGGCTGCATCTGTCCCTCGCTTTTTT
CACGATCCGATGATATCTGCAGGCTGACGCCATTGACAAATGCATCGTGG
AAGTCCTGGCCAAGAACACTTCTGTAGACGAGACGATTTCGTGGCAAGCT
GCACTTGACTCCACATCATGGTTGAGAAATAAAAACTAAGTTTCGCACGG
ATCATGCTGTGGTGATTTTCGGTCATTCCTGAAACCCTTACCGTACCCCA
AAAAATGTGGTTGATTAGAGATGCATTGGAAGGATGCTGTTGTTCTTTGC
GCTCTTGCACTAGTCTGAGTGCAGCCGGGATGTTGGTGAACGCCGAACGT
AGGGGGGTTCGGGAATGTGTGTCCACGTCCTGAAGGGGCTTATGGCATAA
AAAAACTTAAAACAAACCCTCGTAACATGTAGCAGATCGATAAATCGGGT
AGAACGTTCAGGAGGGTGAAGGGTCTCAATCCAAGCGGTTGTGAATACGT
GCTCGGGATTATTATCGAAAGGTGTCCAATTTTGTTTTGTCACAATTTTC
ACTTATATCCGAGGCCCTCGTCTAGATTGAAGACCCTGCATTATCCAACC
GTGAGCCTAGCTGTCGATGGAGTGTACCCTCTTCGAACTACGCACATCGC
GCTCAATATACAGCTCGCCTGGTACACGGTATATTCGCCTACCTAACCCT
AACCCCTATCACATCCGCGTCCCCACTCATGTGCTTTCACAGCCCGACTA
CGGCGATCAGGATTTCCCAGACCATCTCGCTTTTCATTCGGCTCGTCCGG
CCCTGATTACCCCCCAAGGCCAAAACCGTGCCTGCATGGCTATTATAGCG
CTCGGACCCGGCCTTAAACTGCCGCTGGACCGAGCTGGGGAATTTGGCTC
ATCGAAGCTCTTCGACGACGACGGTGGTAAGGATTTACCAATCACCCTGC
AGTACGATTGACAGCCCTCACCCCCAACTCAAAATAATTGTAGCCTTACT
TTACATCAGTAGCAGTAGGCATGAGTGTGACTGAGGAGAGAGCAAGCGTC
AACAGGCAGACCTCGTGGCAAGACATGTTTCGACTTACTGCATTCCTTTT
ATTTAATTTTAATGTAATGATCCCCCCCTTCCCCGCCTTCCAGTCTTTTT
GCTCTTTCCTCTCCACTCGATATATGTAATTTGTTCCTGCTTGTCACTTT
TTGTTTTCCCTTTTTGTTCCCTGTTTCCTCTTTATTTGGCGGCCTCTTTT
GCGTGCAGTCTTCGTGCCCTCCTTGTATCTTTTTATTTTTTTATTTTGTC
TTTCGTCAATTGATGAAGAAGGTACTGGACCATATGCGCACTGATTTGCT
TTGCCTTGGTTTGTCATGGCCCTATGCTCTGGTTCGGTACACGTTTTCAT
TTGGCCATCATAGATGGTACTCCGATGGTAACCTATTTATTGTGACTGTG
GTTGATCATCGTCCATTTATTTTCTTATACTTTTCCTCCTAGCACGATTT
GTGCTTGGTTTGTGACCACGGGCTAGACTGCGGCGGTAGTGGCCTAATGT
GAGAATCAACAACAAGAACTCTCACCCTATTACCAACCATTCGCGCTGCT
TTACTGATGGTGCACCGTTTTCAAATCACTTGTACACTCTTCATCACAGA
TGGCACCAAGCTCGACACCCTGAGGAAAGCTTTACAACACCCCCAAGCCG
TGTTGAGCATGACCGTCTACGACCACCTGACGTTTATGGACGCGGCAGAT
AAGGGCAGCAGCTTACACCATGCAGAGGAGATGTCTCGGGTAAGAATCGT
CTTTTGTTTGGATCACGTCCTCCAGGTTTCGTTAGGTCTTATCATGACAA
CGGTCGGAGATTGTAATACGGGTGTGAATGACACGAACCATGCGTAAAAT
CATCCCCGTCCTCATGGCTGGTGTGTTGGGTATCTACGGTCTCGTCGTTA
GAGTCATCCTTTCTGGTCCAGTGAGTGCACAAAAAACAAGGGAGTTTTTT
CGAGCGTCTGTTGTGGTCGCGTCACTGTGAGTCGTGGTTCCTTACCTTCG
GAGCTCAAATAACCGAACTACACCTTATTCAAAGCTTTTCATACACATGG
CATTTGTCTCGCGGTTACAGGATCTCTTTTAAATACTTTGTTGACCCTAC
CTAGTTTCGCCTCCGTGTTTCACATAGTCTACGCGACGCAACAAGAGGCC
GAAATCACGGCGAATGTCATTGATTGCTTCTTGTTCGATACAGAATAATT
TGGGTTAGGTATTACTCATGACGGGCTGGTTCCCAAGGGATTTATTTTGG
AGTTGTTTGTGGGCGTTGTCGTTTCTTCAATATCCACATAAGAACTTTCT
AACAAAGGTTGACTACATACAGCAGTAGTTCTGGTTCCTCACATGAGGAG
CTATTTGATCGTCGTTATAGTCATCCTTTCGGGTCCAGTGAGTGCACAAA
AAACAAGGGAGATTTTTTCGAGGGTCCGTTGTGGTCGCGTCCCTGTAGAG
TTGTGGTTCCTTACCTTCGGAGCTCAAATAATCGAACTACACCTTATTCA
AAGCTTTTCATACACATGGCATTTGTCTCGCGGTTACAGGATCTCTGTTA
ACTACTATGTTGACCCTACCTGGTTTCGCCTCCGTGCTTCACATGTAGTC
TACGCGACGCAACAAGAGGCCGAAATCACGGCGAATGTCATTGATTGCTT
CTTGTTCGATACATATCAATTTGGAAATATTACTCATGACGGGCTGGTTC
CCCAGGGATTTATTTTGGAGTTGTTTGCGGGCGTTGTCGTTTCTTCAATA
TCTACATCAGAACTCTCTAACAAAGGTTGACCACATACAGCAGTAGTTCA
CTGGTTCCTCACATGAGGAGCTATTTGATCGTCGAAGCTATTTGATCGTC
GTTAGAGTCATCCTTTCTGGTCCAGTGAGTGCACAAAAAACAAGGGAGTT
TTTTCGAGGGTCCGTGGCGGTCGCGTCCCTGCAGAGTTGTGGTTCCTTAC
ATTACTCATGACGGGGTGGTTCCCCAGGGATTTTTTTTGGAGTTGTTTGT
GGGCGTTGTCGTTTCTTCAATAACTACATAAGAACTTTTAAACAAAGGTT
CCTCACATTAGGAGCTATTTGATGTGAGCCGCTTTGAGGGCGTCGTTGAC
CACATTCTGGCATGTCATTGATTGCTTCTTGTTCGATACTTGTTCCTCAA
CTGAAAGGACGGATTTGATTTGAGCAGGATGAGGAAGTTCGTTAACATTT
GATAGTCTCGAACATATTCTTGGAGGAAGTCAGCCACATGATATTCTCAC
AGTTTGGGTTCAAGAAACAGTACCTCCATTCCCACACAAGCAATAATTGT
TAGACATACATCAAACCATGAAACACGTACCGGTAGTTGAGAAATGGACG
GTATCCCGGAACTAGTAACTGATAACAGTTTGTTCAGTACCTCCATTCCC
ACACAAGCAATAATTGTTAGCATTGAAACACGTACCGGTAGTTGAGAAAG
GCCCGTGCTAACGTGTTGCTCTGGTAGGCCGCCGCATGTATATAACTTTC
GGCATACTGCTATCCCTCCATCCACTTGGGTTGCTTTGATCCTGAATGTA
GAAACCAAAGCACTACGCCCTGATAGTGAGAATGGGCCGCTTGGTAAGAC
AAGTCTTCGTCAACGGTAACGGGGGGAGGGAGGTAGGCTTCGCCGAAGAG
GTGCTTGGGAAAGGGTGGAGAGCTGTTCTGCACAAGCAGCGAGGACATGC
AACAACTAATGACACAAAGAACGCTGTCGCGTTACAGAAGAAGTTGGCCT
CTTACGTGGCCCAGGAAATGGAGAGGGGTTTAAAAGCAGTGAAGGGCAGG
TCATGGGAGACGCTTGTCTACAGCCACGCCTTGGAAATTTCCGTCCACAT
CGTGACTACGATCATGACCCGCTTCTATCAGGAGGATGACCCAGAAGCGT
TCGAGGTGAGAGGTCTACTCAAGTATTGCGCGTTGTGTTTCCGTTTCAAT
GTGATCTACAATGTGATCTTTACACCGAATCATTTCTGAATATCCAAAAT
TCAACTGAGGGAGCTTGCCCTCGGTTTGTATCACGCCAAACTTTCTGATA
CATCGAAAAGATTAATGCAGCGTAGGCAAAAGTTGAAAAAAAAATTGGTC
TTGAGAAATGCCAGGTTTCACCGGGCCTTTAACGTGCGGAACCCAAGCAC
AACAAAATCCTACAAACGAACACATTTTTGCTCATTTAGGATACATCTTT
TGAAGGAATTCTACAAACGAACACATTTTTGCTCATTTAGGATACATCTT
TTGAATGAATTCAAGATCAGCCAATACATCTACTTTGAATGAATTCATAC
TTTGAATAATTTCAAGATTAGCCAAGTTGCTGCCACGAAATTTCGATGAT
TATTTGTGTTCAATGCGCTGTCTATTGGCCTCAAACGGCGTGTTTATTTG
GCAGGTAACCTACGAGACGCGTCACTCCATTCTTCCGCTCTTCTCGTCCA
TTTCAACGACAGCAATGCACATCGATGGATATAACGCACCACCGTGTATC
ACCAAAAACGATACTTTTCCTTCCTCCTTTTGGGAACCCTCTACCGCATG
TGTCCCTCTTCTATGCCGAAAGCTTGCTAACCTAGGGGCAGGAAGCAAAC
CATTACCGGAATGCTTGGTGCAGCTGTTTGGCCTTCTCGAGGCTACGCAG
CAAACCGACTTCATCTCGAAGGCAGTCGCAGCCTCCGGCCTCGTAAATAA
GACCAAAACTAAGGCACTCACCGAGGCCAACACCGACATCCTGAGGATGA
TCTCCCTCACTTTGGCTCTAGGACAGTGCTCAGGCAAGGCCATCTGCAGC
AAGGAGGACGTACCTTTGCCCGCTGAAGGCATTGTTGGCCTCCTGCCGAC
TTTCGTGACGCCAGCTCAAATAGTCCAGTTCAGCAACGACAACGGCAAGC
TGCAGGATGTTCTCATCAGTATTTTGGGAGAGTCATGGAACACCTTCAAA
AAGAAGGCCAAGGTGTGCGACAAGAGGGGTTCGCAGTCGACTGTGTACGC
GGCAATTAATAAGCAGGGCTTGGCCGTGGCTTTCGGAAATAAGAACAAAA
GCAACGTGTCACCGGGGCTTGGCAGGATGCCCATTCTTTCGACGTGTTGT
CTACGTCTAGCCTTCGACCACAAGGTCATGGGTCAGTTCCTTCTTCACTC
TGCGGACAAAGAGGAGGTGAAAGACGCTCGGTACTTAGCTGTCGAGTTCA
GCATGCTGTGCGTGGATCACGTTGCGCCTGGTCCGATCTCCAGCTTCGAA
CGCCTCTGGGAGGAACTTGATCCCAATGGATTCCTGAAGAAGAACATCAT
GGCACAGCCTACAATTTTGGACATGAAGGGGAAACCATTCTTCGACAAAG
AACGAGCCGCTATCATCGCAGCAGCGGGTAACGGGGCTAGCCCGGGAACG
GAGGGTAGTAAGCAAGAAGACCACCTCGACAAGAATGGTGAGGAGGATGA
CGGAAGTGAGAGTCTCTGTATTGTTTTAATATGCAAAGTACACAGTGGTA
CCACAGCAGTGATGCTGGATGTTTTCCAATGATCTCAACATCCAAGATCA
AAATTCAATGAAACTTACGACCTGATGTAGAGCCGCGTCCAAAAACAAGC
TTGGACATTGAATGTATGGATCTCCTCAGGTAAATGATTGAATTTCCTGT
TGTTGTAACATATGTCAACATAACGGTATCAGCGTGAGCTCCTTACATGA
CGAACTACCTGGTATGCTTTTTCACCATATCTGTTTGTTCGTAGTGTGTG
CTGCTTGGACATTGAATGTATGGATCTCCTCAGGTAAATGATTTAATTTC
CTGTTGTTGCATCATATGTCAACATAACGGTATCAGCGTGAGCTCCTTAC
ATGACGAACTACCTGTTGACCCTATTTTATTTCGCTATGTCGCTGTTTTC
CTGCCAACACCGGCGTTGAAGACGCCGACAAGCGAACGTCTCGAATACAG
ATTAACCTGGCCGATGGCGAGACCTTCCTCACGGATCTCCCAATGGACAT
GGTATCTGCCCTACTCTCGAATCGAGGTCGGACCTTCCTGTCAGACAACG
GAGGCATATCCGTGATAGATCCAGGCGACTCTCGACAGGACCCCAAGAAG
AGAAAGGCGACGATGTGAGGAGAAGAGCGTTTTGGGCGGATTTAGTTTCA
ATTGCGATTTGAACTCTAGCCTTAAAATGCTACGTACAGCGGTCAGACTG
ACTTTATATAAAGTGATGGGTTAAGGATTTCATTCGGCTAGGGATAGTTC
TTTTCCTCAGCGGAAGAAATGGATGGCCGGAATCCGAAGCATTCTAAATA
CCAGTTATTGATCTCATATTCTCTGCTTCCAAATGACCCTCAGCGCCTCG
AACGATAGCGACAAACATGGACCGGTGACCACGTCTCCTACGGGGACGTC
TTTGGCGAAACGGCGAAAGGTCTCAGGAACGGAACTGGGAGAAAGGTACC
TCGAATCGCTTTCCCTCTTTGTTGCGATCAACTCAAATGTTTTTTTTTTC
TGTCGTACAATTTACTTGAAGGCCAGCGACGGTGGCCTATGAGACTGGTC
CGTTCACACGGATATAATATACGTGAACAGATAGCGCTTCGACGTGCTCC
TGCGCAGTTGACAAACAGCCGAACCCTAACCTTACACGGCACGTGTTCCG
GCGCAACGATGATATCCGATCTCGGACACGCGATCCAACCTGCGGCCTTT
TTACTTTCCCGCCCTGCTCTGCAAACATGGGCTTTGAAATGTGCACGTCG
ACGTTGCCGGCTTTCATATGATTACCTTCTCAAGCTCTTCTGCGAGCAAG
GTACAACCGAAGGCAGTCGAAGAACAAGAGGGAACGGGTGACGAAGGACT
CGTCGGAGAGACATCACAGACCAACGGCACTGAAGCCTCACCAGCAGCAA
CCATCGAAACAGCTCAACCCCTGTGAGTATATTTATACATTTTATGCTGC
AAAGAGGGTGCAAAGTTCATGTCACATCATTCGACGGTTCTTTTACTTTG
TTTTTGTTCGTAAATAGTTTCAGACATTCAAGCATTGCATTAATTCGTAA
TCACTTTCAGAAATTCAAGCAATATACGCTCCTGCCAATCACTGTTCGAG
CTCCGCACGTGAGGAACTAGATGTGAAAAACTTCTGCTGTAAGGAGGCTA
CAAAGTCCATATCACATCGACGGTAACTTCGGACTTTGCATAAGTTCATG
ATAAGCTCGAGATACATTCAAGCATTGTTTCATCATGTGCGTTTCAGCGC
ATGTTTGATTTGTGCACGTAACCAACAACGAGAATAAAAATCTGAATGAA
ACAGACAAGTCTCTCACACACATGCAAGCCATCTGACCCATCACGCATAT
GTACTGCGCATTGATAATTTTGCGACGTGTTCGCCTCTTTTTGTTGCGTC
TACTAATAGTTTTTGTTTTACGTGGCGTTGGTCAGGcCCCCCGGTGGCGA
TCACAGGAAAAACTACGTCAAGTCAACTACCACCAACTTCTCCGAAGCAA
GTGATGACGACGAAGAAGGTGAAGATCTCAACAGCTTTCTTAAATCGCCT
GCGCCTGCCAACATCGACGAAACGCTGTTGGGAACGAAAATGTACGATTT
GTCCTCTATGCTGTATTTAATTTGGTCGGGTAATTTTCAGTAATTTTGAT
CGCGATGCCGAAAAGGAAGACTGTGTTTTGATTAGACGGAAAACTTCTGC
GAATACACTACACCTCATCGCCACAAAGCAAACCCGATCCTCTAACAAAT
TCCACTTTCGTGTCTTCCGATCGTGCGTCCTCCTCGACCTATCACAGATC
CTGCGTCCTGAAAGCGATCGAGAGCTGCAAGACACATTTCGCTGGCGCGA
CGCCCAAGGAGGCAGAAATCAAAACCTATCTCAAGAAAAGCATGGGACGG
GACAACTTCCGGCATGTGAACCTCGCCGCGACAGCGCAGTTAGAGCTCAA
TCAGACGTCGGCGTACGTATTCACGCCCGACGTCGTGCGCAACACAACCA
CCCCCACCTTAGACGACCTGCGACTATCGAATAAGGGAAGATATATCTTT
ACGACTGGGTGCGGGTTCGGGTCGCTGTTTGATCTGGTAGCGCAACAATT
CGGCACAACTTTCCCGATCAAAGCTTGCGAAACTTCTCGCGTGTGGAGGC
GTACAGGCGCCGATTTAGGCCGCACGCGCAATAATCGGTTGCAGAGATAA
TATTTTTACCGAGTGCTTGGAATGTCGGTGATATTTTTGTATTTGCTTAA
ATTTTCAAATGGTAGTACTGAGCAAAGACAGCAGAATAAAGGTGGCTGTG
ATGTGTTGCAAGTACGAAGTGCTTCAGAGAGAGGTGATGAAGTATTCGAG
AGAGAGGTGAACTACCATGTGCGTAAATATCGCGTACAGAGGTAGACTAC
TTGGGGGGGGTCGACGGTTGAAACATCGGTATACTTTACTTGATCGAAGG
AAGGTTGGCAAAAGTGTGCGCAGGCTCCTCATGTTAGGAACCCTCATAAA
CTCATGTTGTTTCTTGTAATTAGTTTCTTGTAATTAGGCCACCGTTCCCT
TGGAGGCCGGCGGAATGGCGCGATATGTCGTTCTTTTGTTTGTTGCCATT
CAATGGACTTTGTTGTTGATGGGCTTGATCGTGGTGAAGGTTCTTCTTTG
GGCATATGGCCTCCGGTTATGTATGCGCATGTTGTTACGTTCACTCTAGA
GCACTCAGCGGCTTCATTGTGCTCGCACGCGTAGGACGACACCTAGCGAT
GTTTAAGTAAGATGTATTGTGAGGACTTGCACTACATACATTGATGATAT
AATGGGACGTCTTTGTACACCCAGCACGAGTTCTTGGGGCCAAAAACGGG
AACACTAACTTACCCTAGTGCACTGCTTTGTCTAATCCGAGGGAATATAG
ATAGGATCATGAGGGCGAATGCTTGACTTATGCATGATGTGGGTAACCCC
CGATTATGTGCTACCCTCACCGTCTGGTGGGTGAAGAACCCTTGTCCATG
TGACAATGAATGACATGTTCACAGTTCTTTGTTGAACCTGTTAGGCTTTT
GTTTTGATCGTTGCTTTTAATCCG back to topCoding sequence (CDS) from alignment at P-littoralis_Contig1281:18192..31065+ >mRNA_P-littoralis_Contig1281.16.5 ID=mRNA_P-littoralis_Contig1281.16.5|Name=mRNA_P-littoralis_Contig1281.16.5|organism=Pylaiella littoralis U1_48|type=CDS|length=2766bp|location=Sequence derived from alignment at P-littoralis_Contig1281:18192..31065+ (Pylaiella littoralis U1_48) ATGTCAGTCGACGTCCTAGCTCGCAAGGCCGCCACGGCCCGCGCTGCTCG AGAGAAAGGATTGCTGAATGACACGCACATTTCGCCAACGAACTTCGCTT GGCACGTGAACAACGCCACGATGAATGGACCTCTAGCAGTAGGCGACTCC CACCAACCCGAGGGACTCAACAACGGGGGCAAGAATACCAACATCATGTC GGAGAGCACCCTGCAGCGGGTGGCTGAGGGCTTTCGCGAACACGGCGTAC GACAAAAAAAAGCGACAGCCATGGTCGCGACTCCGGCGGACAAGCAGCAT GCCACACCACGAGAATGGCTGGAGGGCTACCGAGTCGCTCTCGAACTACT TCCGAGGCCGAACCCGCAGCCCGACTACGGCGATCAGGATTTCCCAGACC ATCTCGCTTTTCATTCGGCTCGTCCGGCCCTGATTACCCCCCAAGGCCAA AACCGTGCCTGCATGGCTATTATAGCGCTCGGACCCGGCCTTAAACTGCC GCTGGACCGAGCTGGGGAATTTGGCTCATCGAAGCTCTTCGACGACGACG GTGATGGCACCAAGCTCGACACCCTGAGGAAAGCTTTACAACACCCCCAA GCCGTGTTGAGCATGACCGTCTACGACCACCTGACGTTTATGGACGCGGC AGATAAGGGCAGCAGCTTACACCATGCAGAGGAGATGTCTCGGAAACCAA AGCACTACGCCCTGATAGTGAGAATGGGCCGCTTGGTAAGACAAGTCTTC GTCAACGGTAACGGGGGGAGGGAGGTAGGCTTCGCCGAAGAGGTGCTTGG GAAAGGGTGGAGAGCTGTTCTGCACAAGCAGCGAGGACATGCAACAACTA ATGACACAAAGAACGCTGTCGCGTTACAGAAGAAGTTGGCCTCTTACGTG GCCCAGGAAATGGAGAGGGGTTTAAAAGCAGTGAAGGGCAGGTCATGGGA GACGCTTGTCTACAGCCACGCCTTGGAAATTTCCGTCCACATCGTGACTA CGATCATGACCCGCTTCTATCAGGAGGATGACCCAGAAGCGTTCGAGCTT GCTAACCTAGGGGCAGGAAGCAAACCATTACCGGAATGCTTGGTGCAGCT GTTTGGCCTTCTCGAGGCTACGCAGCAAACCGACTTCATCTCGAAGGCAG TCGCAGCCTCCGGCCTCGTAAATAAGACCAAAACTAAGGCACTCACCGAG GCCAACACCGACATCCTGAGGATGATCTCCCTCACTTTGGCTCTAGGACA GTGCTCAGGCAAGGCCATCTGCAGCAAGGAGGACGTACCTTTGCCCGCTG AAGGCATTGTTGGCCTCCTGCCGACTTTCGTGACGCCAGCTCAAATAGTC CAGTTCAGCAACGACAACGGCAAGCTGCAGGATGTTCTCATCAGTATTTT GGGAGAGTCATGGAACACCTTCAAAAAGAAGGCCAAGGTGTGCGACAAGA GGGGTTCGCAGTCGACTGTGTACGCGGCAATTAATAAGCAGGGCTTGGCC GTGGCTTTCGGAAATAAGAACAAAAGCAACGTGTCACCGGGGCTTGGCAG GATGCCCATTCTTTCGACGTGTTGTCTACGTCTAGCCTTCGACCACAAGG TCATGGGTCAGTTCCTTCTTCACTCTGCGGACAAAGAGGAGGTGAAAGAC GCTCGGTACTTAGCTGTCGAGTTCAGCATGCTGTGCGTGGATCACGTTGC GCCTGGTCCGATCTCCAGCTTCGAACGCCTCTGGGAGGAACTTGATCCCA ATGGATTCCTGAAGAAGAACATCATGGCACAGCCTACAATTTTGGACATG AAGGGGAAACCATTCTTCGACAAAGAACGAGCCGCTATCATCGCAGCAGC GGGTAACGGGGCTAGCCCGGGAACGGAGGGTAGTAAGCAAGAAGACCACC TCGACAAGAATGACGCCGACAAGCGAACGTCTCGAATACAGATTAACCTG GCCGATGGCGAGACCTTCCTCACGGATCTCCCAATGGACATGGTATCTGC CCTACTCTCGAATCGAGGTCGGACCTTCCTGTCAGACAACGGAGGCATAT CCGTGATAGATCCAGGCGACTCTCGACAGGACCCCAAGAAGAGAAAGGCG ACGATCGCCTCGAACGATAGCGACAAACATGGACCGGTGACCACGTCTCC TACGGGGACGTCTTTGGCGAAACGGCGAAAGGTCTCAGGAACGGAACTGG GAGAAAGGcCCCCCGGTGGCGATCACAGGAAAAACTACGTCAAGTCAACT ACCACCAACTTCTCCGAAGCAAGTGATGACGACGAAGAAGGTGAAGATCT CAACAGCTTTCTTAAATCGCCTGCGCCTGCCAACATCGACGAAACGCTGT TGGGAACGAAAATATCCTGCGTCCTGAAAGCGATCGAGAGCTGCAAGACA CATTTCGCTGGCGCGACGCCCAAGGAGGCAGAAATCAAAACCTATCTCAA GAAAAGCATGGGACGGGACAACTTCCGGCATGTGAACCTCGCCGCGACAG CGCAGTTAGAGCTCAATCAGACGTCGGCGTACGTATTCACGCCCGACGTC GTGCGCAACACAACCACCCCCACCTTAGACGACCTGCGACTATCGAATAA GGGAAGATATATCTTTACGACTGGGTGCGGGTTCGGGTCGCTGTTTGATC TGGTAGCGCAACAATTCGGCACAACTTTCCCGATCAAAGCTTGCGAAACT TCTCGCGTGTGGAGGCGTACAGGCGCCGATTTAGGCCGCACGCGCAATAA TCGGTTGCAGAGATAA back to top
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