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|
Homology
BLAST of mRNA_P-littoralis_Contig127.77.5 vs. uniprot
Match: D7FMQ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMQ5_ECTSI) HSP 1 Score: 402 bits (1034), Expect = 1.260e-126 Identity = 274/545 (50.28%), Postives = 317/545 (58.17%), Query Frame = 2
Query: 203 LALLEGTLLTNGDLKGSWRFKREDVVQNDFCMVLMGKGIYDGGFNIQVPKANTLTPAVLEIHDKWHSFEWVETTKPSCNVWGQGCNNQFGGFYTIGVHDPRQRRIVIYKVCEEEMRRAREFARAGMQM--QTPPLTAPPPVMAGXXXXXXXXXXXXXXXXXXXXXXXXXXAAFATSTARGRGQKRPRAH-ARSGEIATAAAML-DRNTSTAGGSCSSNSGSIGG---GKCPHADARSGDXXXXXXXXGRSDPMREAGSEGGSAGRSGVHEMDCPGANMDEDMDPGTIYKNMDEELHGVGSPRVRMNKRVXXXXXXXXXXXXXMDEDMGEDMDEEHLDVDGLGTNTIHK-GTRKPVPVPIRIPADMLQVSSLPGFSGRFDDGS-LTFADASVDELADLSILGARLQREKLKIQEDAKAQRQPFEKQKEEYQSKLIKARGNETMMLRAVQELREQMVDDERSLESATQRVMSYEAEEQHALLLWNEKWETQVAPFIAQCEQGVRKKAEELEKKALQAXXXXXXLKRELERLDSVKQIGDVFPPNLSI 1810
+ALLEGTLLTNGD+KGSWR +RED V DF MVLM KG+YDGGFN+Q+P P+V E+HDKWHSFEWVETTK SCNVWG+G NNQFG FYTIGVHDPRQRRIVIYKVCE EMRRA+ FA+ + + P P +A AA +TA GR QKRPRA+ A E+A AA +L +N + G+C G P DA CP + D L G G P +HK +P PVPI PA+ V +LPGFSGRF+D S + FA+AS+DELADLSILGARLQREK+KIQEDA+AQRQPFE+QK+EYQSK+ K R +E MMLRAVQELR+QM++DER LESATQ V SYEAEEQHAL+LWNEKWETQVAPFIAQCEQGV+KKAEELE + XXXXXX ERL SVKQIGDVFP N S+
Sbjct: 1 MALLEGTLLTNGDIKGSWRARREDEVSQDFLMVLMDKGVYDGGFNLQLPNTRPSAPSVQEVHDKWHSFEWVETTKSSCNVWGRGLNNQFGEFYTIGVHDPRQRRIVIYKVCEAEMRRAQAFAQMTITSAGRLPAAAPSDPGLAAPKRTRSATAK----------------AAAVAATAGGR-QKRPRAYDASPREMAAAATLLYQQNLTVETGACXXXXXXXXXXXXGCYPRVDAF------------------------------------CPSYDGDAGGXXXXXXXXXXPALGG-GRPLA-------------------------------------FPAPQVHKENPARPTPVPI--PAE---VRALPGFSGRFEDASTVDFANASMDELADLSILGARLQREKVKIQEDARAQRQPFEEQKKEYQSKVQKGRADEAMMLRAVQELRKQMLEDERKLESATQCVKSYEAEEQHALMLWNEKWETQVAPFIAQCEQGVKKKAEELEIRTXXXXXXXXXXXXXXERLHSVKQIGDVFPANQSM 449
BLAST of mRNA_P-littoralis_Contig127.77.5 vs. uniprot
Match: A0A6H5JEN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEN2_9PHAE) HSP 1 Score: 367 bits (943), Expect = 5.860e-113 Identity = 262/516 (50.78%), Postives = 303/516 (58.72%), Query Frame = 2
Query: 143 KLATKPPKENSLDSFIPTSYLALLEGTLLTNGDLK-GSWRFKREDVVQNDFCMVLMGKGIYDGGFNIQVPKANTLTPAVLEIHDKWHSFEWVETTKPSCNVWGQGCNNQFGGFYTIGVHDPRQRRIVIYKVCEEEMRRAREFARAGMQMQTPP--LTAPPPVMAGXXXXXXXXXXXXXXXXXXXXXXXXXXAAFATSTARGRGQKRPRAH-ARSGEIATAAAMLDRNTSTAGGSCSSNSGSIGGGKCPHADARSGDXXXXXXXXGRSDPMREAGSEGGSAGRSGVHEMDCPGANMDEDMDPGTIYKNMDEELHGVGSPRVRMNKRVXXXXXXXXXXXXXMDEDMGEDMDEEHLDVDGLGTNTIHK-GTRKPVPVPIRIPADMLQVSSLPGFSGRFDDGS-LTFADASVDELADLSILGARLQREKLKIQEDAKAQRQPFEKQKEEYQSKLIKARGNETMMLRAVQELREQMVDDERSLESATQRVMSYEAEEQHALLLWNEKWETQVAPFIAQCEQ 1672
+ +P KE SL SFIPTSY+ALLEGTLLTNGD+K GSWR +RED V DF MVLM KG+YDGGFN+QVP P+V E+HDKWHSFEWVETT +CNVWG+G NNQFG FYTIGVHDPRQRRIVIYKVCE EMRRA+ FA+ + TP L A P G XXXXXXXXXXXX QK+PR + A E+A AA ++ + T E G+ C Y +D XXXXXXX +E L +HK +P PVPI PA+ V +LPGFSGRF+D S + FA+AS+DELADLSILGARLQREK+KIQEDA+AQRQPFE+QK+EYQSK+ K R +E MMLRAVQELR+QM++DER LESATQ V SYEAEEQHAL+LWNEKWETQVAPFIAQCEQ
Sbjct: 9 RATAEPRKEKSLHSFIPTSYMALLEGTLLTNGDIKDGSWRPRREDDVSQDFLMVLMDKGVYDGGFNLQVPNTRPSAPSVQEVHDKWHSFEWVETTTSTCNVWGRGRNNQFGEFYTIGVHDPRQRRIVIYKVCEAEMRRAQAFAQITI---TPAGCLPAAAPSNPGLAAPKRTRLATAKAXXXXXXXXXXXXXX----------QKQPRTYDASPREMAAAATLMYQQNLTV----------------------------------------ETGAXXXXXXXXXXXXXGC--------------YPRVDAFCPSNDGDAXXXXXXXXXXXXXXVRSGLMNEEGSXXXXXXXXXRPLALPAPQVHKENPARPTPVPI--PAE---VRALPGFSGRFEDASTMDFANASMDELADLSILGARLQREKVKIQEDARAQRQPFEEQKKEYQSKVQKGRADEAMMLRAVQELRKQMLEDERKLESATQCVKSYEAEEQHALMLWNEKWETQVAPFIAQCEQ 452
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 3189 |
| Hectar predicted targeting category | other localisation |
| Exons | 9 |
| Ec32 ortholog description | expressed unknown protein |
| Ec32 ortholog | Ec-23_001210.1 |
| Cds size | 1689 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789563.5789936-UTR-P-littoralis_Contig127:338821..338935 | 1680789563.5789936-UTR-P-littoralis_Contig127:338821..338935 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig127 338822..338935 + |
| 1680789563.6003194-UTR-P-littoralis_Contig127:342472..342482 | 1680789563.6003194-UTR-P-littoralis_Contig127:342472..342482 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig127 342473..342482 + |
| 1680789563.6982713-UTR-P-littoralis_Contig127:349285..350661 | 1680789563.6982713-UTR-P-littoralis_Contig127:349285..350661 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig127 349286..350661 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789563.611005-CDS-P-littoralis_Contig127:342482..342605 | 1680789563.611005-CDS-P-littoralis_Contig127:342482..342605 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig127 342483..342605 + |
| 1680789563.6191802-CDS-P-littoralis_Contig127:343056..343190 | 1680789563.6191802-CDS-P-littoralis_Contig127:343056..343190 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig127 343057..343190 + |
| 1680789563.6303086-CDS-P-littoralis_Contig127:344363..344511 | 1680789563.6303086-CDS-P-littoralis_Contig127:344363..344511 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig127 344364..344511 + |
| 1680789563.639845-CDS-P-littoralis_Contig127:344906..345602 | 1680789563.639845-CDS-P-littoralis_Contig127:344906..345602 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig127 344907..345602 + |
| 1680789563.6523833-CDS-P-littoralis_Contig127:346958..347180 | 1680789563.6523833-CDS-P-littoralis_Contig127:346958..347180 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig127 346959..347180 + |
| 1680789563.6639242-CDS-P-littoralis_Contig127:348147..348282 | 1680789563.6639242-CDS-P-littoralis_Contig127:348147..348282 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig127 348148..348282 + |
| 1680789563.6744127-CDS-P-littoralis_Contig127:348539..348629 | 1680789563.6744127-CDS-P-littoralis_Contig127:348539..348629 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig127 348540..348629 + |
| 1680789563.6856048-CDS-P-littoralis_Contig127:349144..349285 | 1680789563.6856048-CDS-P-littoralis_Contig127:349144..349285 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig127 349145..349285 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig127.77.5 >prot_P-littoralis_Contig127.77.5 ID=prot_P-littoralis_Contig127.77.5|Name=mRNA_P-littoralis_Contig127.77.5|organism=Pylaiella littoralis U1_48|type=polypeptide|length=563bp
MAASEGKLATKPPKENSLDSFIPTSYLALLEGTLLTNGDLKGSWRFKRED
VVQNDFCMVLMGKGIYDGGFNIQVPKANTLTPAVLEIHDKWHSFEWVETT
KPSCNVWGQGCNNQFGGFYTIGVHDPRQRRIVIYKVCEEEMRRAREFARA
GMQMQTPPLTAPPPVMAGAVVAAAAAAAKAAAAKAAAAQAKAAQAAFATS
TARGRGQKRPRAHARSGEIATAAAMLDRNTSTAGGSCSSNSGSIGGGKCP
HADARSGDGGGGGGGSGRSDPMREAGSEGGSAGRSGVHEMDCPGANMDED
MDPGTIYKNMDEELHGVGSPRVRMNKRVHAMDCPGANMDEDMDEDMGEDM
DEEHLDVDGLGTNTIHKGTRKPVPVPIRIPADMLQVSSLPGFSGRFDDGS
LTFADASVDELADLSILGARLQREKLKIQEDAKAQRQPFEKQKEEYQSKL
IKARGNETMMLRAVQELREQMVDDERSLESATQRVMSYEAEEQHALLLWN
EKWETQVAPFIAQCEQGVRKKAEELEKKALQAEKEKMELKRELERLDSVK
QIGDVFPPNLSI* back to topmRNA from alignment at P-littoralis_Contig127:338822..350661+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig127.77.5 ID=mRNA_P-littoralis_Contig127.77.5|Name=mRNA_P-littoralis_Contig127.77.5|organism=Pylaiella littoralis U1_48|type=mRNA|length=11840bp|location=Sequence derived from alignment at P-littoralis_Contig127:338822..350661+ (Pylaiella littoralis U1_48)
ACCGGACCAACAAACTACAAAGCAAGGCAAACAGGCCAGACACGTGACCC
ACACTCGCGATAGGCACGCGCGCTGAGCATCTAGGGAGGAACTGGACGAC
AGAAGATATAATAGGTGCGCCACCTATCTAATCTCTAGATACAAGCTTGA
TCCTAGCGCTGGGTGTGTTCGTCTGGCAGCCACCGAGAGCTGTTTTTCTC
CCTCTTCCCAACTTTACGTGAGAGCAATGCGGTTTCACGTAGCGTGATGC
TTGAGCGTCCGCGCAAGCGTGGTGGGTTGATGATACCTTGCATCTTGTAG
CGGTACGAAGGTCGATGGATCGTTGTAAAGGAATCTTGAAGCTCTACGTT
GTCTTCGTCTCTTTTCTGTCCCTGCCCTCCTCCTGCGAGGACTCGGGCAT
TGAGCAGTATTTTGAAACTTGAAAAACTCCTTTCTTGTTCCAAGTTTTGT
CAGGCATGTCGCCGTTCTACGTTCAATTAATGTCTATGGGTCCTCTTTCA
TTTTTTGTTTGACCCGCCGATTGGCAGCAGTAATTATAAAGCTCGCACAG
CAGTAGGACGACGACTACCTCACCCCATCAGCCCAGTGTAACAGGAGTAC
GGCTATATCTCCGTGCGGGTTACCTACTTGTATGTGGCTACAGCGTATGT
TTCTTTGTCCTGCTACGGTATACGAACTTTGCATCAATGACATTTTTTTT
TTGGTATTCTGGAAAGAAACAGCAGTAAAGGTGTTTCTAGCTTAGCATTC
AGGTGGTCGTGACGCCCATCACAATGCAGGTTCTTGAGATTCTCTCTCAA
CAGCAGTCTTCGATGAAAACTTAAGCCGGGACAGGATCAGTCAGAATTTT
CACAGCAGTACGCAGTACGCATACGTGAGTGCTTGCCGCGACCATGTGGT
GGTGCATTGAATTGGCCCATTGTACGTATTGCCTATTCACGACCTTCTCC
CCCTCGGCTTCAACAAATTAATAAAGTACGAACGAAGTTTGTATGGTGAT
TCAAAGAGCGTAGAACTAAGATGAGCAAACGGGCTTACTCAGAGTAGCAG
CAATGAGGGCATGAAATGCTGTTTTCCGTTGGATCGTTGTGATATTTTAA
GGAACATGCATCATGCAAGGTAGCATATGTATGATACCCGGGTAATACGT
GTAAGTATGACCGGCATTGGGGGGCTTGTTAGATATGAAGCAATCTCTGC
TTGTCGTATACCCAGGTTCATATTAGGCATCAGAACAATCTTACTCGTTG
ATCATTTTTAGCAGGTCAATAAACGTGATGAATTATAGGTAGTAGCATTG
CACGTCCGCATGTTTCTCTCTTCTTTGAGATCGACTACTCTGTTCCCCCC
CCCTATATTTACGGTTTACCTCCCACCCACCCCCTTTTCAGCCGAAAAGC
GTGAAACCGGCGATTTGCCCCCCGTGGGAAACTTTATTAAAAAAAAAGTC
CCCACTCCCAAGACACGATTTCCCCCCGGCGTAATTTTTTTCCGATGCGT
TTCCCTCAAGGATTATTATTCGATAATTCACGATTTTTGCGTTACTACGA
ACGAAAAGCGCCGACTCTTGAGGCCAACAAGCCGTTTTCATTCAGCACTC
GTACGAGTTTTGGAGGTTGCATGCATTTATTTACCGTATTGTGTTTCTTA
CACATGCAGCGTGCAGTTGCTTTTGGGCTCTTTGACCCCATAGGAAATGT
CTCCCCGGGGTAATATAAACAAGAAATTGGGTTCCCCCGGGGAAAATATT
TTCCCCCGGGGTCGCAAAAAAAATATAATCCCCCCCCAAAAGGACCACAC
CCTGGACAATAGACAACGTCCAATTGCTACTGCTATATTTTCCACTACAA
TGGACGCCATTATTGTCCTCGGGAATAACTATTGATTGATAGGTTTCTAC
ATCCATTGTCTTCGGACATGTCTATCGATAAAACCCTTTTCCATGCTATT
CTCCGCGACCTAATACAATACGAAGTATGATGATACCTGGAGTACCTTAC
CTATTGTTTGCGGCAATTGATATTGATGGAAAGTTTGGATGATCAATTAT
GACGGCAATGGCCATCGATAGAAGTCTTGTCAAATGTATTGTGAATGACA
ATGTCCGTCGAAACACGCATCCCGAATCGCATTGCAAAACATCACGTCTA
TCGATACATGTATTCAGGGTAGTTTGTATGGAGAGTATAGTGTGTGTGGA
TACGATGTGCCTTATACCCTGGACAATAGACGGTGTAATGGAACACTGCC
GCCGCAATGGCCCCGAGATTTGAACGTCGATGGCCATTTGTCGGCTTCGA
GGCATCGGCATCTCTGTATATCGATATAAATTGGAGGTAACTATGGATTT
GGGAACAATGAGTACAATATGTCTTTGCCGTCACAATGGAGTGGGCAAGT
TCTCGATCAATTTACTCTTGCACACATCAATGGGACTTCATTCGCGTCTA
TCAATAGCCATTGTCGTGCCCAATGTGTTTTGACGCGTGTCTATCAATAG
ACATTGTCGGCCACATTACTGTGTGTCGGTGTGCCACGGGGGTTCGCGAT
CCCTGGCCGCGCAGAGAAGCAGTGCGGATAGATGAGTGTAAATTTTGAGT
GGATGGTGGGCGGCAGCAGCAGCACCCACGTGGATGATTTTTGAACCAAA
TACGCATGTTCATATTTTTCGAGTATATGATCCATACATGTTAACAATAA
TTCTGCTTGCTGTGTAGATGGATAAAGGAGGTGTTCTTTAAATCTATCGT
CTGAGGTTGTGGCTATTGATAGATCCCCCATAACATATTGTTCGTGGCAA
TGGCCACCAATAGAATCACCCCGTTATCCATTGTAGACGGCAATGGCTAT
CGATAGATAGAACCCCCAGTCTTCTACGGTCTACAAGGCATATCGATGGC
CACTTATCTCGATATTTTGCTACTGCAGTAGATTACCGATGAAAGTTTTT
CCAAATCTATTGTTTCAGGCAACATATATCGAGAGATCCGTTCCACCATC
GATTGTATTATACAATGGGCATCGATAGATTTTCCCCCACGTCTATTGTC
GAAGCAAAAAAGGACTACTGTCGTGTACATTGTCCACGATATGCAAAAGA
CACGATATACCCCCGATGGTGTGTATTCAGGAAGAAAAAAGAGAAAAAGA
TCTCCTCGCCGGGGGGAAAACAGAGGGGTTTACGGATACTGTACGAGTAC
TGCTGCACTGCTGTTGCGTTGATCGTTCTGCATGTTTCATGTGTCGTGTA
TCGTGTATCGTGTATCGCCAAATCGAACGAGTAAGAGAAGAAGGCTGGCA
TTGTGAGCTGGTTGGCGTCAATCCAGCGATGGTCTGATTTTCCTGTTCAG
CGGATTGCGACAAATCACCTCACGACGAACATCCTCAATGGGGGAACACA
TGCTTTCGTTCATTCAAGATCTCAGGCCGCTCCATCGCCCGACCCGAAAC
ACCACACTTGGCTGTTTTCGTGGTACTTCAAGGGGCAGGGGATTCAAAAT
GCCGAACGACAGCGAAGAGAGACAAACACGCTCTTCCTGCGACGATAGAC
AGGGCCACGTATGCTTCGACGTGCTGGCAATAATTACGCCCGAGTGTACA
ACGTAATGCCCCACGCTGTTTTTGTGAAAACTGCGATTTACCCACCTACA
GTCGAGGATTGATGGCGGCGTCGGAGGGGAAGCTCGCGACCAAGCCCCCG
AAGGAAAATTCTTTGGACAGCTTCATCCCGACATCCTACCTAGCTCTGCT
GGAAGGGACCCTGCTGACCAATGGCGACCTCAAAGTGCGGGCAGACAAAC
TTGATGGACGATTTGTTTTTTATAACAAATGTTACAAAATAAAAATAGTA
GACGGCAGAATTGGATTGGTCACAGCTTCCCACATGGTTTTGCCTGCTGT
TACACGGCAGGATAGGCTTGGGTGTCGGCTGTTTCTGATCGTCAAAATTA
ATTTCAACGTCGACCGCTCCCCTCCCACATCCATCAGAACATGGCTCTAC
AGCTCACCAAACCACGCACGCCCCTGCCTGAGTGTTTCGTCGATGGCCGG
ATATGTGTCATACCGTGGGGGAGTGATGCATGGTTACCTTACCACTATTG
CTCGACCTGTTTGTCTTCAGTTCGACCCGTATGGATATCGCAAAGCAAGC
GTTGACGTTTACGTGTAACGAGAGTGTGATGGCGTCGTGCTCCCCCCGCT
CGCCTCCCTCGCACTCCTCACCCTTCACTATTTAGGGGTCATGGCGGTTC
AAGCGGGAAGATGTTGTGCAGAACGACTTCTGCATGGTGCTCATGGGCAA
AGGGATTTACGATGGAGGCTTCAACATCCAAGTGCCCAAGGCGAACACCT
TAACCCCCGCCGTCCTAGAGTGAGACAAACTTAATTGACTAGACTTTTTT
TTTCCTACACCATGTCATTTTGTTTTTTAATAAGCCTGTGACCGCATATG
GAGTCCCCCTTCCCAGTTTTCTTAGCAGTGCCGACATTAGAAGTTGTTGC
TGTGCTGATATCGGAACGGAGTTCAATGAGAAGGCAACACACACACTTTT
TACAAGTGCCTACCATTGGCAAGATGGAATCCCATGATTGCCCGCGATAA
GCTAACTGGTATCGTGTGGTACATACAAACGGGATGGCATGCCATAAAAA
AAAATATAGCCTGGGACATGAAAGGAGGCGTGTTTGGACGTACGTATCAT
AAGCGTGTGACGTCGAAGCACACCAAAGACCGGCTGTCTCCTCAGCAACC
TCTTTATAAGACCTTCTTCAGCGTTTTGGTGTTCGATGAAATAACCCCAA
AGATTGCTTAGCCCCACGGGATGGCCTGGTAATATTTCGTCATCGGGGCA
TACCCATATGAGACCTGGTTCACGGACAAATTACTTGATCCACGAATGGA
ATGGACACTACTCCATTGAAGGTCTGCTTTCCTACATACGTACTCGGTTC
ATACATTGTAGAATGGACTGGGCACAAGAGGCACTACTTCGTATTGTACT
TCGAAGGAGTAATTTCTCCAATCAAAATGTATCAAAGCAGGCTCGCGTGC
GTGTTGTGTTGGTTGAGAGTTGCTCGGCCTCTCTTTTTCGATATCGTGCA
CCCCGTGCAGTAGCTCGCTTTGCGTGTCGCTTTCTCTCGCTCAGCCTTTG
GTTTCTGATTGGGCAGCTCTGTGTACAGTATCATAGCCGTTATTTGTCGC
CGGTTGAACGCTTTGAGCCGCATCTGTGCCCTCGATGCTGCAGACGCACG
CTCTCATATGTGTACCGTTTTTCCCCCAACTGAGGAGCTTCCAGCTCCCC
TCCATTCATCACAAAGCTGCACTGTGTATCCCTTGGGCTTCTCAATGTCT
TGTGGATGTGGTCTCCTCCACTTTTCCATCCATCCTCTAAGCCGCATCAT
CGGTGCCCTCGAAATCCTGTGTTGTTTTACTCTGACTCATCGTGATGCTG
CACCACGTGTCCCTCAAGCTGTGCGTGACCGCCCTTCGACGTGTCTTGCG
TTGCCTGTTTGTCCTCCAACGGGTGTGTTTCTGGCCAATCAGAATCCATG
ACAAGTGGCACTCGTTCGAGTGGGTTGAGACGACAAAGCCGTCTTGCAAC
GTGTGGGGCCAAGGGTGCAACAACCAGTTCGGGGGGTTCTACACGATCGG
CGTGCACGACCCCCGACAGAGAAGGATAGTGATATACAAGGTGTGTGCCG
AAAATTAAAAGAGGCGTGTGTGTATGCGTGTGCATGTATTGTTCACTATA
AATTTGCTGATTTATGATACTAGCCTTTATTGAACAAATGTTGGTTTTGC
AACCCGAGGTTCGAGAAGAGGAGGATGGTGTCCGGCGAGGTAGACAGACC
TAACACTACGCCTTGCATTGCTCATTTCACGCTGTTTTTCACCGGCGGGG
TCCCCGTCTGGGAGGCAAAAGAGACGCGCAAGCGCCAAAAAGACCTTGAG
CGCAGATGTGTCGGGCGCGTCTGCTGCCGCCGCCGCCTCGAAGAAAAAAA
ATCTCGTAGGCTGTCCCAATCTCATCATTTTTTTCATGTATCAAATGTCG
CGTTCTTTCTTCCTCCCCGACTGTTTTCTGTTAAGGTTTGCGAGGAAGAG
ATGCGCAGAGCTCGAGAATTTGCGCGAGCAGGCATGCAAATGCAAACACC
TCCGCTCACCGCTCCCCCACCGGTGATGGCTGGAGCGGTTGTGGCGGCGG
CAGCGGCAGCGGCGAAGGCGGCAGCGGCGAAGGCGGCGGCGGCGCAGGCG
AAGGCGGCGCAGGCCGCATTCGCTACTTCTACAGCGCGGGGGAGGGGACA
AAAGCGACCGCGTGCGCACGCGAGGTCGGGGGAGATTGCCACAGCCGCGG
CGATGCTGGATCGGAATACGAGCACCGCTGGGGGTAGCTGCAGCAGCAAT
AGCGGTAGCATTGGTGGCGGCAAGTGTCCGCATGCTGACGCGCGGAGTGG
CGATGGTGGTGGTGGCGGTGGGGGGAGTGGAAGGAGTGATCCAATGAGGG
AAGCGGGCAGCGAAGGCGGATCGGCAGGACGCAGTGGAGTTCATGAAATG
GATTGTCCCGGGGCTAATATGGACGAGGACATGGACCCCGGGACAATATA
CAAGAATATGGACGAGGAACTTCACGGCGTGGGTAGTCCAAGGGTTCGTA
TGAACAAGAGAGTTCACGCCATGGACTGTCCCGGGGCTAACATGGACGAG
GACATGGACGAGGACATGGGCGAGGACATGGACGAGGAACATCTCGACGT
GGATGGTCTCGGTACTAATACTATACACAAGGTTTGTGATGTTTTGTTTC
GGTTGTATATTGTTCTGGGTTACATCATCATGAGCCTCTTGCATAGCTCC
TGCCCTCGTACCCTCGGGCGTTTGCTCATTGTCGTGTGGCGGTTTATTCG
TGCAGAGCGATTTTCACTGAGTTATTCGAGGGGAAAGTGTCGGCTTGTTT
TTTTTTGTCTCCGCTTGTTTCGCGGCCCCCGTGGATGGCTCCTTTGTTGT
TCCTTCCGGTCGTGTGCTTGTTTGCCTGATGGTCTGCGTGGCTTCGGATC
GCGCTCCGAATAAATACCAGCGCTTTTGTTTGCGGGCGTGCGAGCCCTAC
GGTGGGTCGCTTGAGATACCACACGGAACCCCTAGGATTGAGTCCTTCAA
AGATCGACTTACCCCTAGAGCAAAGATGTTTGTGCCGAAAAAGATGGAAG
ATGATGACCGGCGCCGGAACCACGCCATCGCGTCGAGAGCTTTGCGTCAA
ATTGTTGGCATCCTCTTGGTTTTTTATGTTGGCACCTTCTTACATCGTTG
TGGAGTATGTAAGCACCCTATTTTGCATAGTTGTGGATTACCGGTATGTT
GGCACCCTCTGCCGTAGTTGTGGAGTACCGGTATGTTGGCACCCTCTTGA
ATAGTTGTGGATGTTATGATAGTATGTTATGATAGCACTCTTCTTTTTGC
GGGGTATGTTAGCTCTCTCTTCATCGTATAGCACTCGATATTTTATAGCA
CATGACATGATGTAATTTGACAATCGGTCCAGGGGGTGCCGTGGAATTTC
TTATTGGTCTGCGGTTAATCGGGCAAGGAGCGAGAGCTTGAGCGCTCCGT
GGCTCGACACGACCTTCGCCCTAGAGTATCCAAGCGTTGGACTCGTTCTG
TTTGTTGAAGAGCCAATGGTTTTATCATATCATACGAAGCATTTTTTTTT
TGTGGAGAAGAAGCTGATCATATGCCCAAAGGTCGCGGTTACCGCAACCC
TTGTGGCAGTTTGAACGCCATAATCACACGTACAAGCTGCATTTGAACCT
ACGCCGTCAGCCCGCAGGGTTGAGTTCAACGTCGTGCGTTGCGGTAACAA
TATCTGCTGTTTTTAACTCCTCATGATATGTTGTTGTTACGAAGTTCCCC
ACAGCAGTAGTGACGAGTGTTTTTGCAGCCCGGGAGACCAACAATCTCGG
TGCATCTCATGCGACGATACGAGTAGAAGCAACGCCATACGCAGCCTGTT
TGACAACGTGTCTTTCCCGTATTTCCGTCTCCACCCTCCCTCCCTTTCTC
TGTCTCTCTCTGTCGATCTCCCTCCCTCTCTTGCTGTTGCTTGCCTGACT
TGGACGGTTACGCCACCATGACGAAAAAAAAACGAAGGGTACGAGAAAGC
CGGTTCCTGTGCCCATCCGGATACCGGCGGATATGTTGCAGGTGAGCTCT
CTCCCTGGTTTTTCAGGACGGTTTGACGACGGTAGCTTAACCTTTGCCGA
CGCCAGCGTGGACGAGCTTGCCGATCTTTCGATCCTAGGAGCGCGTCTGC
AGAGGGAGAAGCTCAAGATACAGGAGGACGCCAAGGCCCAACGGCAGCCC
TTCGAAAAAGTGAGCCCGTTCACCTTCAGGATGATATCGACCCACGTCGT
ATTATGTGGCCGCATTCGTACGTGTGTGTGTGTTCGTTCCATTTGTTTTG
GCACCAGTTGATACACCTTGTACCAATTTACGTATGTACGACCCGTTCTT
CGGTCCCATTCCGCTTCTCGCAATCGCCAGCTTTGCGCCTTCGTCCTTCC
CTCCATCTTAAAAAGTGAAAGGTTGAAATCCAGGCACTGGGTAAAAAAAT
TACTTCGTTTTCGTATGTTTTATTTTGCCTCCGCTTCTTGCACCCGCCAG
CTTGTTTTTTTCTTCTCTATGATACGTCTGTCTTTGTTTCTTGCGCTCGC
CACGGCTCGTAAACAACTTGTTCAACTGCGTGCGCAGGCGTTCGTTCTCC
AAAAAAGAGCAAATCGCCGTATGTTTTCTCCACCCGCGGACTCGTATCTT
TACCCGCCCGCCGACTCGTGTCTTTCCTATTATGAGCCCCATTCAGAGGA
AGACAAATCTTCGTTTCCCGGAAAAAAAACCTTTCCCATTGGTGCACTCG
AAACTTTTGCTTCCACACGGAAGGCAGCCGCCGCGGGTATCATGTGGTTG
GGGTGCCTCCACGTTTGTATGCCGGGAGCCCTGGTGTTCCTGGTATTGCG
CTCTTCGTGAGATGTCCGACTCTGAAGTACATGGCGTCTGACCTTCATGA
ATATTTTGGAATACAGACCCTTTGCATTCCCCGGAATGTCCGTTTCGCGC
CCGCTACAACAGTACTGCTGTATCATAGACGGTGACTCGCTCGGGGAAAG
TGAAAAAATAAGTGCTGCAGCGTGTGAAACCGGCGAAAAAAATGAGTTCG
CGCGCATCATCTCCTCGACGGGAAACCTCCTCTTATCATACTGCTGTATA
CCCTCCAACTAACATACACTCGTGTGTCTATGTGTGTGTGTGTGTTTGTT
TTCGTGGACATCGCCCCCGCTGACAGCAAAAAGAAGAGTACCAGAGTAAG
CTGATAAAGGCAAGGGGGAACGAGACAATGATGCTGAGGGCGGTGCAAGA
GCTGAGGGAGCAGATGGTGGACGACGAGCGATCACTGGAATCGGCAACGC
AGCGAGTCATGGTATGATATGCGTGACATGTACACTACGTACGAATAACC
AGCCCCCCCCCCTCCATTTCATTTCACGCAGTTCTGCACGGACACCGGCA
AGCCCTTTTTTTTCGGCATTCCTTTAAATACCCCCCCCCGCCCCCTCCGT
CCTTCGCCGCCTCAAAGCAGGTACGGTTTGGTACAGAACTACGACAATCA
AAAAGTAGCATTTAAACAGAGTGTCCTCCGCTGTTGCCGCTGTTTGCAAC
ATGACGTGCACGACACAGAGCTACGAGGCGGAAGAGCAGCACGCCCTCCT
GCTGTGGAACGAGAAATGGGAAACCCAGGTCGCGCCCTTCATCGCTCAGT
GCGAGCAGGTACACACATGCCGCGCGTGGGTTACCTTTGCCGCTGTACAA
AGCACCGCCGAGATTCGAGTTTGGAAAGAAAAGTGAAGAAATTTCCTAGA
AAAATTCGGAGAAATTCTGCTGTTCTGACCTGGCAGAGTTGTGCCGCCGT
TCATTTTTTTATTTTATTCTTTTAAGTCGAAAATTGTTTGCTCTCACAGG
TACTGCTGTAAAATAGCAGAGAAATGTTGTACGTACAGCAGCGGAATAAA
AGAAACCAACAGCAGTCGAGAGGTTTGTCACGGGGAGAGGTGACAGGCTC
TTGATTGATCAAGTCCAAGTGGGTAGACGGATCGCGCTCCTGAATCGCTC
AGTGCAAGCCGACGTTCGGTCTGCACAGCAGTTGCTCTAGAAGGAACAGT
GTCGCCTATCTGCATGACATGGAACACACACGACACAAGACACTCAGGAA
AAATGTGAAACTGTTTGTATTCCGGAGTAACGCAAGCCTGTGTGATGTAA
TGTGATGGCTCGTTATTTCGTAGGGGGTACGGAAGAAAGCCGAGGAGTTG
GAGAAAAAAGCGCTCCAGGCAGAGAAGGAGAAAATGGAGTTGAAGAGGGA
GCTCGAGAGGCTGGACAGCGTCAAGCAGATCGGCGACGTTTTCCCGCCTA
ACTTGTCGATCTGAATACGAAAATACGTTTCTTGTGTGTTTCATCAGGCC
GACCAAATCTATTTGGGCTCGAAGACAGCGCTCGGCAGTTTGAGTTTAAA
TGAGGGACTGCTGCATGCCTGCGACAAGTCCGCTTGACTTTCACCTTTAC
TACCCAGTAGAGAGAGACTGTATCTCATCTCATCCGAATATGCCGTAGAA
CTGAGTTTGCTTTTATGTTAATCACACCGGCGGAGGGCTTTTGGAGTTTC
CGGTAACACGGCCGGAAGATACGGAGATACGATACGGTAGAAATATCCGG
TCGTCAGCAGCGCTAGAAGTTACCGATTGAGAAACGTCAGCGTCAGGAAA
CAAGTTTTTTTTTTTAATGTTTTCCGAGGCCCGCGTGCTTCATGTTCGTA
CGAGTACCATATCTAGTTTTTCGGGGCAAAACTACACCGGTAGGTACGCA
TAACGTAATGAGTGGAATCGTATAGCGGCTCTCAGGGTGCATAGTCACGA
GAACGACAGCCGTCACAAACTAAACATGTGTACATGGTTATAAGGAGGGG
TGGTCAAGAGAGCGCACGCACAAGCAACGCTAAGCATAACGGAGGAATTG
GCTGCCAAGAGCATACGGTAACGGGACGAGCCAACAGCGTACATGATATG
ATATGTACTAGCGCGCGGGAGTTTTGACATGAGAACTCGAGGCGTGTTCG
GGTTGTGCCCGGTAAGGCAAGGGGCAAGGGCAAAAGCATGGCTCTCCGGT
CTTCCTCTCGAGCAGGAACACGTGTGTCGACTATCCCTGTACAGGACCCA
CGTCTCGCCAGACAAACTCATTTTTGACGCATTATGGCTAGACAGGAGTT
AAACGCTGAATAGCGTGTGGTTTGGGGCCCTATGCAAGACGGATGGGAAC
GCAGGCCGACAATCTCGCTCAACAACGCGGGTGCGTTTGCGATTCGGTGT
AAGATAGGTAGACGGGTTCTTCTAGCGGTTTTGCCTACTTGTTATGGGGT
AGCTTGGAGTACATTTCTAATTTGTTCGGCCTGTCTGTTGTTGTTGTTGT
TGGTGGTGGTTGTGGTGATGGTGGTGTAGCTGTTGGTGGTGGTGGTGGTG
CTGCTGCTGCTGCTGATGTCGTGTACGTGGTATTGCTTTGACCTATCAAG
TCACCTTTAATATGTTTCCCCAGGTTCGGCACGAACACAACTAAGCCAGA
AAAATAATACCTGCTCGTGCTTTGAATTGGAACAACAAGCCACCATTTTT
GTCGATCGGGAATGGCCATCTGTCTTCGTCGGAATTTTTGTATATATGGA
AGAAACACGGCGCGCTGGATGAGTTTTTTCTTCCCTTTCTTGACCACGAC
ACGAGGATGTTCCATTTCGGTTTCATTGTCTTCTCGGGAG back to topCoding sequence (CDS) from alignment at P-littoralis_Contig127:338822..350661+ >mRNA_P-littoralis_Contig127.77.5 ID=mRNA_P-littoralis_Contig127.77.5|Name=mRNA_P-littoralis_Contig127.77.5|organism=Pylaiella littoralis U1_48|type=CDS|length=1689bp|location=Sequence derived from alignment at P-littoralis_Contig127:338822..350661+ (Pylaiella littoralis U1_48)
ATGGCGGCGTCGGAGGGGAAGCTCGCGACCAAGCCCCCGAAGGAAAATTC
TTTGGACAGCTTCATCCCGACATCCTACCTAGCTCTGCTGGAAGGGACCC
TGCTGACCAATGGCGACCTCAAAGGGTCATGGCGGTTCAAGCGGGAAGAT
GTTGTGCAGAACGACTTCTGCATGGTGCTCATGGGCAAAGGGATTTACGA
TGGAGGCTTCAACATCCAAGTGCCCAAGGCGAACACCTTAACCCCCGCCG
TCCTAGAAATCCATGACAAGTGGCACTCGTTCGAGTGGGTTGAGACGACA
AAGCCGTCTTGCAACGTGTGGGGCCAAGGGTGCAACAACCAGTTCGGGGG
GTTCTACACGATCGGCGTGCACGACCCCCGACAGAGAAGGATAGTGATAT
ACAAGGTTTGCGAGGAAGAGATGCGCAGAGCTCGAGAATTTGCGCGAGCA
GGCATGCAAATGCAAACACCTCCGCTCACCGCTCCCCCACCGGTGATGGC
TGGAGCGGTTGTGGCGGCGGCAGCGGCAGCGGCGAAGGCGGCAGCGGCGA
AGGCGGCGGCGGCGCAGGCGAAGGCGGCGCAGGCCGCATTCGCTACTTCT
ACAGCGCGGGGGAGGGGACAAAAGCGACCGCGTGCGCACGCGAGGTCGGG
GGAGATTGCCACAGCCGCGGCGATGCTGGATCGGAATACGAGCACCGCTG
GGGGTAGCTGCAGCAGCAATAGCGGTAGCATTGGTGGCGGCAAGTGTCCG
CATGCTGACGCGCGGAGTGGCGATGGTGGTGGTGGCGGTGGGGGGAGTGG
AAGGAGTGATCCAATGAGGGAAGCGGGCAGCGAAGGCGGATCGGCAGGAC
GCAGTGGAGTTCATGAAATGGATTGTCCCGGGGCTAATATGGACGAGGAC
ATGGACCCCGGGACAATATACAAGAATATGGACGAGGAACTTCACGGCGT
GGGTAGTCCAAGGGTTCGTATGAACAAGAGAGTTCACGCCATGGACTGTC
CCGGGGCTAACATGGACGAGGACATGGACGAGGACATGGGCGAGGACATG
GACGAGGAACATCTCGACGTGGATGGTCTCGGTACTAATACTATACACAA
GGGTACGAGAAAGCCGGTTCCTGTGCCCATCCGGATACCGGCGGATATGT
TGCAGGTGAGCTCTCTCCCTGGTTTTTCAGGACGGTTTGACGACGGTAGC
TTAACCTTTGCCGACGCCAGCGTGGACGAGCTTGCCGATCTTTCGATCCT
AGGAGCGCGTCTGCAGAGGGAGAAGCTCAAGATACAGGAGGACGCCAAGG
CCCAACGGCAGCCCTTCGAAAAACAAAAAGAAGAGTACCAGAGTAAGCTG
ATAAAGGCAAGGGGGAACGAGACAATGATGCTGAGGGCGGTGCAAGAGCT
GAGGGAGCAGATGGTGGACGACGAGCGATCACTGGAATCGGCAACGCAGC
GAGTCATGAGCTACGAGGCGGAAGAGCAGCACGCCCTCCTGCTGTGGAAC
GAGAAATGGGAAACCCAGGTCGCGCCCTTCATCGCTCAGTGCGAGCAGGG
GGTACGGAAGAAAGCCGAGGAGTTGGAGAAAAAAGCGCTCCAGGCAGAGA
AGGAGAAAATGGAGTTGAAGAGGGAGCTCGAGAGGCTGGACAGCGTCAAG
CAGATCGGCGACGTTTTCCCGCCTAACTTGTCGATCTGA back to top
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