mRNA_P-littoralis_Contig127.73.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig127.73.1
Unique NamemRNA_P-littoralis_Contig127.73.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig127.73.1 vs. uniprot
Match: D7FMQ7_ECTSI (CDP-diacylglycerol--inositol 3-phosphatidyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMQ7_ECTSI)

HSP 1 Score: 345 bits (886), Expect = 1.230e-110
Identity = 174/195 (89.23%), Postives = 179/195 (91.79%), Query Frame = 3
Query:  624 GYARVALVLTSYYLAETNWKASSCLYLVAFAGDAVDGHVARKFNQASRFGAVLDMVTDRCSTAGLLLVLSRLYDRRHAFAFLVLMFIDLFSHWMHTHSVVDEHHKSTVTLKRRNILIRTYYDRLPFFAFCCIGTELFYVLLYLLRFVSPGSRAFAPLRKICFWGCLPACVLKQLINVAQIGSAARTLALEELDQK 1208
            GYARVALVL SYYLAETNWKASSC YLVAFAGDAVDGHVARKF QASRFGAVLDMVTDRCSTAGLLLVLSRLYDRRHAFAFLVLMFIDLFSHWMHTHSVV++HHKST TLKRRN+LIRTYYD LPFFAFCCIG ELFYVLLYLL FVS  SRAFAPLR  CFW CLPACVLKQ +N+AQI SAA  LALEELDQK
Sbjct:    9 GYARVALVLASYYLAETNWKASSCFYLVAFAGDAVDGHVARKFKQASRFGAVLDMVTDRCSTAGLLLVLSRLYDRRHAFAFLVLMFIDLFSHWMHTHSVVEKHHKSTATLKRRNMLIRTYYDNLPFFAFCCIGAELFYVLLYLLHFVSEESRAFAPLRTSCFWLCLPACVLKQFVNIAQIFSAASCLALEELDQK 203          
BLAST of mRNA_P-littoralis_Contig127.73.1 vs. uniprot
Match: A0A6H5JEV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEV5_9PHAE)

HSP 1 Score: 332 bits (852), Expect = 6.900e-104
Identity = 174/215 (80.93%), Postives = 182/215 (84.65%), Query Frame = 3
Query:  564 RESEEQQPVRNVLLFYPNLIGYARVALVLTSYYLAETNWKASSCLYLVAFAGDAVDGHVARKFNQASRFGAVLDMVTDRCSTAGLLLVLSRLYDRRHAFAFLVLMFIDLFSHWMHTHSVVDEHHKSTVTLKRRNILIRTYYDRLPFFAFCCIGTELFYVLLYLLRFVSPGSRAFAPLRKICFWGCLPACVLKQLINVAQIGSAARTLALEELDQK 1208
            RE EEQ+ VR+VLL+YPNLIGYARVALVL SYYLAETNWKASSC YLVAFAGD VDGHVARKF QASRFGAVLDMVTDRCSTAGLLLVLSRLYDRRHAFAFLVL+             VV++HHKST TLKRRNILIRTYYD LPFFAFCCIG ELFYVLLYLL FVS  SRAF PLR  CFW CLPACVLKQ +N+AQI SAA  LALEELDQK
Sbjct:  116 REREEQKRVRSVLLYYPNLIGYARVALVLASYYLAETNWKASSCFYLVAFAGDVVDGHVARKFKQASRFGAVLDMVTDRCSTAGLLLVLSRLYDRRHAFAFLVLI-------------VVEKHHKSTATLKRRNILIRTYYDNLPFFAFCCIGAELFYVLLYLLHFVSEESRAFTPLRTSCFWLCLPACVLKQFVNIAQIFSAASCLALEELDQK 317          
BLAST of mRNA_P-littoralis_Contig127.73.1 vs. uniprot
Match: D8LI10_ECTSI (CDP-diacylglycerol--inositol 3-phosphatidyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI10_ECTSI)

HSP 1 Score: 243 bits (620), Expect = 2.670e-71
Identity = 128/209 (61.24%), Postives = 153/209 (73.21%), Query Frame = 3
Query:  597 VLLFYPNLIGYARVALVLTSYYLAETNWKASSCLYLVAFAGDAVDGHVARKFNQASRFGAVLDMVTDRCSTAGLLLVLSRLYDR-RHAFAFLVLMFIDLFSHWMHTHSVVDEHHKSTVTLKRRNILIRTYYDRLPFFAFCCIGTELFYVLLYLLRFVSPGSRAFA------PLRKICFWGCLPACVLKQLINVAQIGSAARTLALEELD 1202
            VL ++PNLIGYAR+  VL SYYLA+TNWKAS   Y++AF GDAVDG VAR FNQ+S+FGAVLDMVTDRCSTAGLL+VLSRLY+    AF FL+LMFIDLFSHWMH  S    HHK+  TL  RN++ R +Y   PFFAFCC+GTELFYV LYLL FV   S A         L  +C++  LPACV KQ +NVAQ+ +A+ +LA  E +
Sbjct:    9 VLFYFPNLIGYARIIAVLASYYLADTNWKASFVCYVLAFVGDAVDGAVARYFNQSSKFGAVLDMVTDRCSTAGLLMVLSRLYEGGTPAFLFLLLMFIDLFSHWMHVQSTAGRHHKAADTLADRNVITRLFYGCYPFFAFCCVGTELFYVALYLLVFVPEASLALGGGGAAVSLHAVCYYVFLPACVCKQAVNVAQLCAASLSLASAESE 217          
BLAST of mRNA_P-littoralis_Contig127.73.1 vs. uniprot
Match: A0A835ZHK8_9STRA (CDP-diacylglycerol--inositol 3-phosphatidyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHK8_9STRA)

HSP 1 Score: 223 bits (568), Expect = 5.910e-64
Identity = 116/210 (55.24%), Postives = 153/210 (72.86%), Query Frame = 3
Query:  597 VLLFYPNLIGYARVALVLTSYYLAETNWKASSCLYLVAFAGDAVDGHVARKFNQASRFGAVLDMVTDRCSTAGLLLVLSRLYDRRHAFAFLVLMFIDLFSHWMHTHSVVDE-HHKSTVTLKRRNILIRTYYDRLPFFAFCCIGTELFYVLLYLLRF-----VSPGSRAFAPLRKICFWGCLPACVLKQLINVAQIGSAARTLALEELDQK 1208
            V L+YPNLIGY+R+A VL SYY+A TNWK S C Y++AFAGD VDG VAR+FNQ+S FGA LDMVTDRCSTAG+L VL+ LY   +AF F+ LMF+D+FSHW+H  SV  + HHK+  TL+ RN LIR +Y   PFF +CC+ TE FY+ LY+L F     ++ G      L ++ F+GCLPACV KQ +N+AQ+ +AA ++A  ++ +K
Sbjct:    9 VFLYYPNLIGYSRIAAVLASYYVAGTNWKLSVCFYVLAFAGDVVDGAVARRFNQSSSFGATLDMVTDRCSTAGMLFVLAGLYPA-YAFHFMCLMFLDIFSHWIHVASVATKGHHKAAGTLQGRNWLIRLFYSCYPFFGYCCVFTEFFYICLYMLAFNKDAFITVGGVE-VHLWQLTFYGCLPACVCKQAVNIAQLCAAAYSMAEVDVARK 216          
BLAST of mRNA_P-littoralis_Contig127.73.1 vs. uniprot
Match: A0A067BHE0_SAPPC (CDP-diacylglycerol--inositol 3-phosphatidyltransferase n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BHE0_SAPPC)

HSP 1 Score: 197 bits (502), Expect = 9.830e-55
Identity = 106/204 (51.96%), Postives = 137/204 (67.16%), Query Frame = 3
Query:  597 VLLFYPNLIGYARVALVLTSYYLAETNWKASSCLYLVAFAGDAVDGHVARKFNQASRFGAVLDMVTDRCSTAGLLLVLSRLYDRRHAFAFLVLMFIDLFSHWMHTHSVVDEHHKSTVTLKRRNILIRTYYDRLPFFAFCCIGTELFYVLLYLLRFVSPGSRAFAPLRKICFWGCLPACVLKQLINVAQIGSAARTLALEELDQK 1208
            V L+ PNLIGY RVAL   S+Y+AET+WK S   Y  +F  D  DG  AR FNQ S FGAVLDMVTDRCSTAGLL++LS LY   +  AFL L+ +D  SHW H ++    HHKS  +  ++N+L+R YY   P F +CC+G E FY+LLY+L F    + A  PL  I ++GC PACV+K +INVAQ+ SAA ++A  + +QK
Sbjct:    7 VYLYIPNLIGYVRVALTAYSFYVAETDWKTSIICYAFSFICDYFDGFFARWFNQCSTFGAVLDMVTDRCSTAGLLVILSHLYPA-YKLAFLFLLVLDFSSHWYHMYASRG-HHKSIES--KKNVLLRVYYGCYPLFGYCCVGAEFFYILLYVLSFEPTLAVAGLPLASIAWYGCFPACVMKNIINVAQLASAAASVAEFDYEQK 206          
BLAST of mRNA_P-littoralis_Contig127.73.1 vs. uniprot
Match: A0A8K1FF61_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FF61_PYTOL)

HSP 1 Score: 194 bits (493), Expect = 1.980e-53
Identity = 109/209 (52.15%), Postives = 141/209 (67.46%), Query Frame = 3
Query:  597 VLLFYPNLIGYARVALVLTSYYLAETNWKASSCLYLVAFAGDAVDGHVARKFNQASRFGAVLDMVTDRCSTAGLLLVLSRLYDRRHAFAFLVLMFIDLFSHWMHTHSVVDEHHKSTVTLKRRNILIRTYYDRLPFFAFCCIGTELFYVLLYLLRF----VSPGSRAFAPLRKICFWGCLPACVLKQLINVAQIGSAARTLALEELDQKR 1211
            V  + PNLIGY RV L L S Y+A  ++K S   Y ++F  D  DG  AR FNQ S FGAVLDMVTDRCSTAGLL++LS LY + +   FL L+ +D  SHW   +S    HHK   T+  RN+L+R YY+  PFF +CC+GTE FY+LLY+L F    V PG+ AF PL K+ F+ CLPACVLK +INVAQ+ SAA  +A ++++ K+
Sbjct:   10 VFFYVPNLIGYVRVVLSLYSLYVALDDYKTSVLCYALSFVCDYFDGFFARWFNQCSNFGAVLDMVTDRCSTAGLLVILSHLYPK-YMIVFLYLLILDFSSHWYQMYSAKG-HHK---TVADRNLLLRLYYNVYPFFGYCCVGTEFFYILLYVLHFDPAYVIPGT-AF-PLEKLAFYVCLPACVLKNIINVAQLASAAHAVAQDDINNKK 211          
BLAST of mRNA_P-littoralis_Contig127.73.1 vs. uniprot
Match: A0A5D6XI13_9STRA (CDP-diacylglycerol--inositol 3-phosphatidyltransferase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XI13_9STRA)

HSP 1 Score: 192 bits (488), Expect = 1.120e-52
Identity = 106/205 (51.71%), Postives = 139/205 (67.80%), Query Frame = 3
Query:  597 VLLFYPNLIGYARVALVLTSYYLAETNWKASSCLYLVAFAGDAVDGHVARKFNQASRFGAVLDMVTDRCSTAGLLLVLSRLYDRRHAFAFLVLMFIDLFSHWMHTHSVVDEHHKSTVTLKRRNILIRTYYDRLPFFAFCCIGTELFYVLLYLLRF----VSPGSRAFAPLRKICFWGCLPACVLKQLINVAQIGSAARTLALEEL 1199
            V  + PNLIGYARVAL   S  +A+T+ +AS   Y ++F  D  DG  AR F+Q S FGAVLDMVTDRCSTAGLL++LS LY + +  AFL L+ +D  SHW H ++    HHK+      RN+L+R YY   PFF FCC+GTELFY+LLY+L F    + PG     PL ++C++ C PACVLK LIN+AQ+ SAA  +A+E++
Sbjct:   12 VFFYVPNLIGYARVALTAYSLAVAQTSPRASVTCYALSFVCDYFDGFFARWFDQCSNFGAVLDMVTDRCSTAGLLVILSHLYPQ-YMLAFLFLLILDFSSHWYHMYASKG-HHKTVAA--ERNLLLRVYYGNYPFFGFCCVGTELFYILLYVLHFFPTALIPGVDV--PLAQLCYYVCGPACVLKNLINIAQLTSAAHAVAVEDV 210          
BLAST of mRNA_P-littoralis_Contig127.73.1 vs. uniprot
Match: A0A1V9ZVH1_9STRA (CDP-diacylglycerol--inositol 3-phosphatidyltransferase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZVH1_9STRA)

HSP 1 Score: 188 bits (477), Expect = 3.400e-51
Identity = 103/205 (50.24%), Postives = 135/205 (65.85%), Query Frame = 3
Query:  597 VLLFYPNLIGYARVALVLTSYYLAETNWKASSCLYLVAFAGDAVDGHVARKFNQASRFGAVLDMVTDRCSTAGLLLVLSRLYDRRHAFAFLVLMFIDLFSHWMHTHSVVDEHHKSTVTLKRRNILIRTYYDRLPFFAFCCIGTELFYVLLYLLRFVSPGSRAFA-PLRKICFWGCLPACVLKQLINVAQIGSAARTLALEELDQK 1208
            V ++ PNLIGY RVAL + S+Y+AET+WK S   Y  +F  D  DG  AR FNQ S +GAVLDMVTDRCSTAGLL++LS LY   +  AFL L+ +D  SHW H ++    HHK+  +  ++N L+R YY   P F +CC+G E FY+ LY+L F  P    F  PL  I  +GC PACV+K +INVAQ+ SAA ++A  + D+K
Sbjct:    6 VYVYIPNLIGYLRVALTIYSFYVAETDWKTSIVCYAFSFICDYFDGFFARMFNQCSTYGAVLDMVTDRCSTAGLLVILSHLYPT-YKLAFLGLLVLDFSSHWYHMYAARG-HHKNIDS--KKNFLLRVYYSFYPLFGYCCVGAEFFYITLYVLSF-EPNLTIFTIPLAAIAKYGCFPACVMKNIINVAQLCSAAASVAEFDYDEK 205          
BLAST of mRNA_P-littoralis_Contig127.73.1 vs. uniprot
Match: A0A2D4CBV6_PYTIN (CDP-diacylglycerol--inositol 3-phosphatidyltransferase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CBV6_PYTIN)

HSP 1 Score: 187 bits (475), Expect = 7.320e-51
Identity = 106/209 (50.72%), Postives = 137/209 (65.55%), Query Frame = 3
Query:  597 VLLFYPNLIGYARVALVLTSYYLAETNWKASSCLYLVAFAGDAVDGHVARKFNQASRFGAVLDMVTDRCSTAGLLLVLSRLYDR-RHAFAFLVLMFIDLFSHWMHTHSVVDEHHKSTVTLKRRNILIRTYYDRLPFFAFCCIGTELFYVLLYLLRF----VSPGSRAFAPLRKICFWGCLPACVLKQLINVAQIGSAARTLALEELDQK 1208
            V  + PN+IGY RV L   S  +A  ++K S   Y ++F  D  DG  AR FNQ S +GAVLDMVTDRCSTAGLL++LS LY +  H F FL+++  D  SHW H +S   + H  TV+  R N L+R YY   PFF +CC+GTELFY+LLY+L F    V P      PL  +CF+ CLPACVLK LIN+AQ+ SAA T+A ++++QK
Sbjct:   14 VFFYVPNIIGYVRVVLSAYSLLIAMDDYKTSIICYALSFVCDYFDGFFARWFNQCSNYGAVLDMVTDRCSTAGLLVILSHLYPKFMHVFLFLLIL--DFSSHWYHMYS--SKGHHKTVSADR-NFLLRLYYGVYPFFGYCCVGTELFYILLYVLHFNASYVIPVIEL--PLHHLCFYVCLPACVLKNLINIAQLSSAAYTVAQDDVNQK 215          
BLAST of mRNA_P-littoralis_Contig127.73.1 vs. uniprot
Match: K3WA89_GLOUD (CDP-diacylglycerol--inositol 3-phosphatidyltransferase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WA89_GLOUD)

HSP 1 Score: 184 bits (468), Expect = 7.560e-50
Identity = 104/215 (48.37%), Postives = 143/215 (66.51%), Query Frame = 3
Query:  573 EEQQPVRNVLLFYPNLIGYARVALVLTSYYLA--ETNWKASSCLYLVAFAGDAVDGHVARKFNQASRFGAVLDMVTDRCSTAGLLLVLSRLYDRRHAFAFLVLMFIDLFSHWMHTHSVVDEHHKSTVTLKRRNILIRTYYDRLPFFAFCCIGTELFYVLLYLLRFVSPGSR---AFAPLRKICFWGCLPACVLKQLINVAQIGSAARTLALEELD 1202
            ++Q+   +V  + PNLIGY RV L   S  +A  E ++K S   YL++F  D  DG  AR F+Q S FGAVLDMVTDRCSTAGLL++LS LY   +  AF+ L+ +D  SHW H ++    HHK+      RN L+R YY   PFF +CC+GTE+FY+LLY+L F +P +    A  PL  +C++ CLPACVLK LINVAQ+ SAA ++A+++++
Sbjct:    5 KKQRTPTDVFFYVPNLIGYLRVGLTAFSLAIALQEKHYKTSIVCYLLSFVCDYFDGFFARWFDQCSNFGAVLDMVTDRCSTAGLLVILSHLYPD-YLLAFVFLLILDFSSHWYHMYASKG-HHKTVAA--ERNWLLRVYYGNYPFFGYCCVGTEVFYILLYVLHF-NPAALIPLADVPLAHLCYYVCLPACVLKNLINVAQLSSAAHSVAVDDVN 214          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig127.73.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMQ7_ECTSI1.230e-11089.23CDP-diacylglycerol--inositol 3-phosphatidyltransfe... [more]
A0A6H5JEV5_9PHAE6.900e-10480.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LI10_ECTSI2.670e-7161.24CDP-diacylglycerol--inositol 3-phosphatidyltransfe... [more]
A0A835ZHK8_9STRA5.910e-6455.24CDP-diacylglycerol--inositol 3-phosphatidyltransfe... [more]
A0A067BHE0_SAPPC9.830e-5551.96CDP-diacylglycerol--inositol 3-phosphatidyltransfe... [more]
A0A8K1FF61_PYTOL1.980e-5352.15Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5D6XI13_9STRA1.120e-5251.71CDP-diacylglycerol--inositol 3-phosphatidyltransfe... [more]
A0A1V9ZVH1_9STRA3.400e-5150.24CDP-diacylglycerol--inositol 3-phosphatidyltransfe... [more]
A0A2D4CBV6_PYTIN7.320e-5150.72CDP-diacylglycerol--inositol 3-phosphatidyltransfe... [more]
K3WA89_GLOUD7.560e-5048.37CDP-diacylglycerol--inositol 3-phosphatidyltransfe... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig127contigP-littoralis_Contig127:319384..328432 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FMQ7
Preferred namePIS1
PFAMsCDP-OH_P_transf
Model size2500
Max annot lvl2759|Eukaryota
KEGG rclassRC00002,RC00031,RC00078,RC02795
KEGG koko:K00999,ko:K15893
KEGG ReactionR01388,R01802
KEGG Pathwayko00260,ko00562,ko00564,ko00630,ko01100,ko01110,ko01130,ko01200,ko04070,map00260,map00562,map00564,map00630,map01100,map01110,map01130,map01200,map04070
KEGG ModuleM00532
Hectar predicted targeting categorysignal peptide
GOsGO:0003674,GO:0003824,GO:0003881,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005794,GO:0006629,GO:0006644,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0012505,GO:0016020,GO:0016740,GO:0016772,GO:0016780,GO:0017169,GO:0019637,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0090407,GO:1901576
Exons6
Evalue1.75e-117
EggNOG OGsCOG0558@1|root,KOG3240@2759|Eukaryota
Ec32 ortholog descriptionCDP-diacylglycerol-inositol 3-phosphatidyltransferase
Ec32 orthologEc-23_001230.1
EC2.7.8.11
DescriptionCDP-diacylglycerol-inositol 3-phosphatidyltransferase activity
Cds size1056
COG categoryI
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig127.73.1prot_P-littoralis_Contig127.73.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig127 319542..327146 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789563.3609464-UTR-P-littoralis_Contig127:319383..3195411680789563.3609464-UTR-P-littoralis_Contig127:319383..319541Pylaiella littoralis U1_48UTRP-littoralis_Contig127 319384..319541 +
1680789563.4340897-UTR-P-littoralis_Contig127:327146..3284321680789563.4340897-UTR-P-littoralis_Contig127:327146..328432Pylaiella littoralis U1_48UTRP-littoralis_Contig127 327147..328432 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789563.3753166-CDS-P-littoralis_Contig127:319541..3200071680789563.3753166-CDS-P-littoralis_Contig127:319541..320007Pylaiella littoralis U1_48CDSP-littoralis_Contig127 319542..320007 +
1680789563.3836749-CDS-P-littoralis_Contig127:323945..3240091680789563.3836749-CDS-P-littoralis_Contig127:323945..324009Pylaiella littoralis U1_48CDSP-littoralis_Contig127 323946..324009 +
1680789563.3969195-CDS-P-littoralis_Contig127:324304..3243751680789563.3969195-CDS-P-littoralis_Contig127:324304..324375Pylaiella littoralis U1_48CDSP-littoralis_Contig127 324305..324375 +
1680789563.4048624-CDS-P-littoralis_Contig127:325247..3254041680789563.4048624-CDS-P-littoralis_Contig127:325247..325404Pylaiella littoralis U1_48CDSP-littoralis_Contig127 325248..325404 +
1680789563.412964-CDS-P-littoralis_Contig127:325830..3260141680789563.412964-CDS-P-littoralis_Contig127:325830..326014Pylaiella littoralis U1_48CDSP-littoralis_Contig127 325831..326014 +
1680789563.4235737-CDS-P-littoralis_Contig127:327032..3271461680789563.4235737-CDS-P-littoralis_Contig127:327032..327146Pylaiella littoralis U1_48CDSP-littoralis_Contig127 327033..327146 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig127.73.1

>prot_P-littoralis_Contig127.73.1 ID=prot_P-littoralis_Contig127.73.1|Name=mRNA_P-littoralis_Contig127.73.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=352bp
MHFLSLICAYTATTAVVLAVVAAGDGDSSNRSKTFPIPTATHQAVTTAGA
AGAAARAGAAAVAAARKRETPPSTSWTERPAYIRQRQTIVAAAAAAAAAA
AKRQLDAFQLAPSSSPPWCMIRGGSRMSQKSRHAQRESEEQQPVRNVLLF
YPNLIGYARVALVLTSYYLAETNWKASSCLYLVAFAGDAVDGHVARKFNQ
ASRFGAVLDMVTDRCSTAGLLLVLSRLYDRRHAFAFLVLMFIDLFSHWMH
THSVVDEHHKSTVTLKRRNILIRTYYDRLPFFAFCCIGTELFYVLLYLLR
FVSPGSRAFAPLRKICFWGCLPACVLKQLINVAQIGSAARTLALEELDQK
R*
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mRNA from alignment at P-littoralis_Contig127:319384..328432+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig127.73.1 ID=mRNA_P-littoralis_Contig127.73.1|Name=mRNA_P-littoralis_Contig127.73.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=9049bp|location=Sequence derived from alignment at P-littoralis_Contig127:319384..328432+ (Pylaiella littoralis U1_48)
CATGGTGTGGGGAAATTGAGAAAACTGGAAAATGGGAACTGGGAAGAGCC GCTTCGATCATCTCACTTGATTGTGGACTCTAGGAGAGACCAGTTTCAAA CACACAGCTCACCGAGGCCCTTCGGGAAACCAGTCGATTACAACGCCTAC CTTATACCATGCACTTCCTGAGTTTGATCTGTGCGTACACAGCGACAACA GCAGTTGTGCTGGCTGTGGTGGCGGCCGGTGACGGTGACAGCTCGAACAG GTCGAAAACTTTCCCAATTCCTACAGCTACACATCAAGCAGTAACAACAG CAGGTGCAGCAGGAGCGGCAGCACGAGCAGGAGCAGCAGCAGTAGCAGCT GCACGCAAACGAGAGACCCCCCCCTCGACGTCCTGGACAGAACGACCAGC ATATATTCGGCAGAGACAAACGATAGTAGCAGCAGCAGCAGCAGCAGCAG CAGCAGCAGCGAAACGCCAATTGGACGCTTTTCAACTAGCACCATCATCA TCGCCACCGTGGTGTATGATTCGCGGAGGATCGCGCATGTCCCAAAAGAG CCGGCACGCACAAAGGGAGAGCGAGGAGCAGCAGCCAGTGAGAAACGTCT TGCTTTTCTACCCCAACCTCATAGGTAATGCTTTTCGCACACTCAGACAC GGCACTCAGCACTCAATCGTCTGTAAAAGCCCTCTTCTGTTTGTAAGGAT CGTACGTAAAAAATTTTAAAACGAGCCTCTTTCCAGTACAGCATGGCGTT CAAAGTGCAAGTAACATCACCGGGATACCAACTGGATCAAGACCCGATTA CAGCAGTAAATTATTAGTATTGTGTGAGCAGTTGGTTGTGTGCTGTACTG CTGTACTCCTCGCTGATTTGGGCCAGGAATCTTAGGGGTTCCCTGACAAC CGATCGTCGGGAGGCACGGATTTTGAAAAACGGTGAACGGGCCCTGACAC TCACACACTGGGTACCTCACACCAGTAGGAAGGTGTCGGGAAAGTTGAAA ACGGTTGGTTATCGCACACAGCGGCGGCGGGGGCTCCTCTTTACATGCAT ATCACATGTCTACCTCCAATCACTTGCATAAATACCGTAAACGTCGGAGT TTTCCCCCCGGAGGGGAAATCTTTTTTTCGGCTGAAATCAAACCCCCGGG GGGAAATTGACGTACCGGGGGGGGTTGGTAGTTTTCTATTTTCCCATGCT ACCCCGGGGGGTGTCTACCCCGGCGGGGGGTTGTGCAGAATATAAATGAA ACGAAGCATTTTTCAACCGTGTTTGGCAAGGTGTGCCGGCATGCTGTGGT GATGTGTTTTGCCGTGACTCCAGGGATAACAAATGCAAGAACACAAAAAA CCAGCGCGTAGTAGGTACCCTGAACACAAAGTGGCATGCCAATCGGCCGC GGTGTAACACACATCTCGCTCGAAGCGCAGAGGTGCAAATGATTTTTCTG GACCATGTCATGCTTTTGTGCTTTGTGATGCAAAAAAACGACTCAAGCAC ACGTACGTGAAATACATCCCCCCCGGGGGGAACTCGTGAAAAAAATGTAC CCCGGGGGGAAATTGACGTACCCCGGGGGAGCTTTTTTTTTTTTGGCGAA AATGATATACCCCGGGGGTAAATCAAAGAATGCACGGTGGCAGGCTGAAA AGGTAATGGGGGGGGGGGGAACACTCTTAGGGGGGGGGTTAATTCCGACG TTTACGGTATCAAGATAAAAAATTTAACGACTCTAAAATCAAGTCAAAAG AGCTTATTTTGATAGGGATTAAACATGGGCTGTCGTCTGTGCGTACCCGA AAACAAGGATTAAATCAAGAGAAGACGTCATGTAGTAGCTACATCTGCGT CGGCGCATTCAGAGCTGCTGCTGGGGCTTAGATATCGATGGTCGCAGTAG AGAATTAAAAACTCGGCAAAATGGACAGATTCCAAAAATCATCTTCCACT GCTGTGCTATCTCCCACTGCTGTACTCGACGCCACATACCCCAACCTCCA AAACTACGGGTCAACAGCAGTAGCTCATGTCAATAGCTACCTCGGACGAA TCGCAGTTCAGAATATTTGTGCCGATGGCGGCGAGTACAGCTGCGTCAAA CGTTTAGCGTCAGTCCGGATTGCGGAGTTTTTCAGGGATCCTGCGGAGTT CTTGTGCCAATGCTGCGAACTTCGATAACTAAGCCCCAGTAGAAGATCTG AATGCGCCGACGCAGATGAAGCTACTGCATGACGTCTTCTCCTGATTTAA TCCTTGTTTTAAGGTACGCATGGACGACAGCCCATGTTTAAGCCCTATCA AAACGAGCTCTTTTGACTTGATTAAAGACTGAAAACGTTCTTTCAGATCA AAAATTTGGTTTTTCAGCAAGGAATTTTTTACCGCCCTTGTCAGGCAACC CTTAATCTTTCTACTCCAAGCTTTTCAATTCATATGCAACTTCGAACTGA AAACCAATTATTGGAGTATTTCCATGTTGAAAATGGAGACCAACAAACAA ACCTGAAAACAAACACTTTAGACGGTACATTCTCACCACATGATGTATCG TGTGTCACACAAGACGACTACCAAATTGTCTTGTTGAGCCTGAAAACCTC AAGGGAGCTGCAACGGTATGTCATCTGTTGAGTTAGAGCGGGGATTAACG GAAGGCCACAAAAAACGAAACAACGGAAACAAAAACGAAACAACTTCGTT CTTCAGGAAAATAAAATAAAAAACTCCATTTCGGTATTATCGCGTCTCTG CTGCGAGGAGCTGGAGCAGCGGAATAGAGGAGATAACGTCAAAAATGATG TTAACCCATGACGTGCGGGGCCCAATTTCAAATAACGCGGTGGAATGCAT CGTGTCAGCGTGTGGGTATCGTAGAAGGCCGTGTGCTGTCTGTTGCACTG ACTGGCGGGTATGACGGCTCGGCGCTGTCTGCTGCGCTGCTGTAGTGTGT GGATTGGGCCTCGCTTTGTTCGGGTTGGTGCCTGTTGCACCGCCGTGTAC CGCAGTCGCAGTCTGTGTGAAGGAGTTCGCTGCCTAGGAGGCTCATGGGC AAGCCTCCCAGGTTACCAAACTCCATGCATTTCGTTTTCGTTTTCGCAAA AAAAAAGGTCCGAAACACTTTATTTTTGCGAAATCGAAAACGAAGGAACG CCTCCCCGGAGGACGTTGAAACGAAATCACGCCTCTTTCGTTTTTTTTCC CGACCAATCAGAGCCCAATTTCGTTTTCGTTTTCGCTACTTCGTTTTTTT GGCCTTCCGTTAATACGGGCTCTCATAGAAACACAAGTAGATGTATTACT TGGTAAGAAAAAAAAAAAAGTACGAAGTATATTTTTGTATGATAGTAGGC AAAGGGCATATGCTACTCCACCGCAAGTAAGTACTGTAATAGTCATCGGG TGCAGGTATGATATCAAACAAGAGATGAAATAGCTGTCGAGTGTTCTGAA CAGATGTGTCCACCCTCGTGGCCCGCAAGGCGGTACTGATGTACATATCA TGCTCCCTTTAGGATCACTCTGATTACAGCAGTACTGCTGTACAGAGTAT CGGCCCGCTGACAAGAGTGGCCAACAAGGTGAGGCTGAGATTTTGAAAAA TCGAAGAAAATGGCGCGGCTCGTGGCGAGCACCTCATGAAGTTCCATGCG TAAAACATCTGTGCGAAGTAAATGGACAAGTTCGGGTCTGGCATCGCACA CAAGAAAGTCAGGCTGAGCCCGTTTTCTGGTTTCTTGTCAGCGGGCCGAT TCGCTATGTAGCTTTGGGCGAGGGCTCCACTGCCTCTTTTACTCCCCTGT GAAAAATGATGAAATATTGTTATTGAACAACAGCTCTGGAAAGCAAGAGA ACGCGTCGCCATTTACTTGCTTATAAAATGAGTTTTGAAGTTGAGCGTTT AGCGAGGTAAAAATTTAGCTATTGGGAGTCACGTGATATTCCAAGTGAAG AACATCAATGTGGCGACCCCAAATAGCGACATTTGCCCACCCAGGGGGTG ACAGGGTTTAGAGCTTTGTTTCAACGGAATTCTCACAGGACACAGAAAAG TCTTGATAGGAGTGCGAGCTCGAGCAACACAGCAGTGTCCGGGCTTGCAA TATTGCGAGGCAACCAACAACCCAATTGGCAACACGCGATTTACGTGAAA ACGATTCACCATTGGAAGATCCGACTAACTTTGTCCTTGGACGACGAACA CGAAGAGCGTCGGCGCTGCATCGAAAAGGGCGGCGTGGGAACCATTTTTA TCGAAGTCTGTTGGCACCCTCTTTATTATCGAGTGAAAACTACCTTTGAA CATCGGTCGAGGGATGTGTTGTCTTACAAAAGGCGGGTTTTCACCCAGCA GCACGGTATATACTACATGCACCAAATATTCCATGTCTCGGACTCACGGG CGTGTCGGCCGAGAGGTTCGCGCTGAAAAGACACGTTGTTTTCTGTACGC AGACGAGGGAGATTGGCCAAATGTGTCTTTGGCCTCCCTCTCCCCCCTCC CTCTCTAGTGGATAATGGCTACCCCCCCCCCCCCCCCCCCCCCGACACCT TAACGCCTTCAGGCTATGCACGGGTAGCGCTAGTGCTGACGAGCTACTAC CTCGCGGAGACGAATTGGAAAGCAAGGTGGGAAAGTGGGAGGGACGGGAT CGGCATAAAGAGGCAGGGTATCCCCTTCATTCCGGTCAGATTGTTACTTT CGTCGATGGGTTGAGAATACTGCGCGGGGCTCGTGCCCATGGGGAGAGTT TGTCTAGGAGCAAGTGGACCGGCGCTCCAACTTCGTTGGTTTCCAAGGCT GCAATCGTCTCGGTACTACTGTACTGTACAGTAGAAGGAAACTGTGAGTG ACTATTCCCGCCTTCCCCTCCCCCCGCTCTTGCTTCTTGCGTACTTTTTG GCATACTTTGTTTTTCGTCAGCTCGTGCTTGTACCTGGTGGCCTTCGCGG GTGATGCCGTAGACGGGCACGTGGCAAGAAAGTTCAATCAAGGTATGTTT CAGAGTTTCCGAAGGAGCCGCTCAAACCTGTTGCTGCTGCTGTCCTGTCC CGTGTTGCACGGTAAAGTGACGCAACACCCTTTTAGAGGAGGCTGTCGGT CAGTTGCCCCATGGAGAATGTAAGCCCTTCCATCGCGTGATATCTCACCG ATTTGCCGATGATTCCAGAGCAGGAGGATTGTCGGTGCCAATGAGAGGCA CCGGAACCATCTCGTCGAGAGCTTTTTAGAAAGTATATGCTTGTCGTCGT CTGGTGTTCGTATCCTCTTCTTCACGGAAGTATCTAGCTTTGAAAACCGG TCGAGGGAGTGTGGTATCTCGTGCCTAACTGCGGTCAAACCAGCTGCTGA GTGACAACGAGCTGACTCAGATAAGACGCGTCGTTGGACCCTCACCACCT ATGTTTGCACCACGGCCGGTACTTCGCGAAGCCTTTGTCGTGCCTGCGGC ACCTCTCGCGGACTAGCAGAAGTTGACATGCGAGACTACAGCTCAAGCAT GACCGGCGTGCGTGCTACTTAGACTCGGGGGTGGACGACAATTGTTCCCC CACGCGCCCCCCCGCGTGCGGCTCTAACCCCTCGAATGTGCCTAACACGT ACACTTCCCACGTACACTTCCCCCGACTTTTAGGACACCCTTTTTGGTCC ATTTCAAAAATTGTTCCTTGATATTCAGGGCATGATCGTGGTATCTTCTA TTCTAATTTCTACATGGCACGTCGATCCTGGGAAAACCGTGTCCTGAACG CGAACAGTTTCCGTCACAAGGGTGTCCTTCGAGCGAGGATAATCGTTCTG ATCGCGAACTATTACGCCCGCCCCCCTGCTCTGTTTTTTTGTCTATTGCG ACATGATGTCACAGCCTCTCGGTTCGGCGCTGTTCTGGATATGGTGACCG ACCGCTGCTCAACGGCGGGACTGCTCCTGGTGCTGTCCCGCCTGTACGAC CGCCGCCACGCCTTTGCGTTCCTCGTGCTCATGTTCATCGACCTCTTCAG CCACTGGATGCACACGCACAGGTGGACGAGACTTGAAAACCATGTTCATC GCAGTATAGTCGAGATAGTCGAGCCACCGCTGTGATAGGTGCGCACGTAG AAGCTATACTTGAATCGTACGATTCAGCCTGTCCTGCGGGCGAGGGCTGA ACGACTGCTGCCATACAGCAGTACATCACGTTTTCGGTGCAACTGCTGTG TGAGCTAATTGTTTTTAGTAAGGGGGCACGCACGCCGCGAAAGGGGGCTA CCCCTTGTTTCTTCCTGTCTTGGCGTCGACGTTGTTTTGGGTGTCTCTCG ACGGCGAACGGTTTATCGTTTATGGACCTTGCTCTCGTGCACGGAAAGGC CGACAATCAAGCGAGATTTCGCGTAACGCAATGTCATGAGATATACCAGG TAAAGCGCATCCAATCTCATCCACTGCCACCACCACCACCTTCGCAGCGT TGTCGACGAGCACCACAAGTCGACAGTCACCCTGAAGCGGAGGAACATTT TGATCCGTACGTACTACGACCGCCTCCCCTTCTTCGCCTTCTGCTGCATC GGGACCGAGCTGTTTTACGTGCTGCTGTACCTACTGCGCTTCGTATCGCC GGGGAGCCGGGCTTTCGCCCCGTTGCGCAAGGTCAGACGGAAGTGATTGT GCCACTTATGTTTGCGGTGTCGGTATGTTGCGAGATAAGAGCGTTGGAGA TGCGCGAAGTCAAACGGAAATTGTCAGTTCGATTTCGCGGTTCATTGGCT GCGAGTCGGGGGCGGGGATGGGAACAACACCATTTTCGCTTCGACTCGGT TCGCGAGGTCGGGTGGATGTGAATATTAGCGTCGCTCAGTTGCATGTGAA TAAGTGGCGTTTGTGTTCGATTGCGAGTTCATGGCGGGGGTAGCTGTGAT AGACTTTCGTTGCTTTCGCGCCGCTGTGCCAAGGTCAGGCGAACAGACAT GCCTATTCCAGCGCCGCATGCTCTCTGTCAGTCGCGAGTTAAGTCGGTAT TACGGTCCGTGTGCGAGGCCAGACAGGTTGGTGTGCTCGTCGTTTCACTT GCTTCGAGTTGTCGTTTTCTTGCGAGTTACGAGCGGAGATGAGGATACCG ATCTCGCTTTCGTCCCCCCCCGGCGCAAGGGCAATGGATGTGCTCATGTT AGTGACGTTTTTGTCGGTTGCGAATTGAGGATGGATACGTGGAGAATATG CTAACTTGCGCCCCGTTGAAATGCAAGGTCAGACGTGTGTGTTCGGTTGT GATTGAAAGGCCGAGACGATGAGCTTTTGCTTGCTTTTCACGTATCGTGC CATTCTAGGAAGATTTGCTTACACTCCAACACCTGAGGTCGATTGGGAGA GTCCTCATGAGTCCGCGTCTCCGCGACGAAAGTTCCAGTGTCGAAAACCG TCTGAGGTTCTTGTGTCGGTCATTCTTCGCCCTCTTAGAGAGGGTGCAAA CAAAGGGGTTGCAGCGAATCTGACCAAGCGATGTCTGCTTGAAATCGGAG GATACGGGATACCATGTCAACACAAACTAAACGTCAAGCAAAACGTGCGT CAAACGGCCTTTATTTGTATTTTTAGTCCTTGAAGTATTTTTTTTGTTGC TCATCCCCCCCTCGCCGATGAACTGAATGTCACCCCTCTCTCCCCCCAGA TCTGCTTCTGGGGGTGCCTCCCCGCGTGCGTGCTGAAGCAGCTCATCAAC GTCGCACAGATTGGCTCTGCCGCAAGGACTCTCGCCCTCGAGGAGCTAGA TCAAAAACGCTAAACAAACGGAGGATAAGCCGGGGGCGCGCTTTGCTGGT AGCCGCCGAATATGAAGAAGGGGGCACTCAGAATGGAAACGATGAACCAG CCTTCGCTATTCGGTCAACCACGCGCTTCTCTCGGGGGCAAGAGCAGTCA AGCAAAAACCGATACAAGTATTTTCACGGGAATGCTGGCGCGAGCCACTT CAACCCAAGTGCTACAAGTACGTGCATCGGACATGGACGACGCTTTTTTC CTAGACGTTCGCCAAAAATTGATCGTATCGTCCAGCGAGTGTGTCAGGGA GCTCTGCTTCATGGGTGCGTCTTGCTGCTGGCACGGAACTAATTTCGTCG ATTGCTTTTCATCATTCGATGGAAGGCGTAACTCGTACAAAAGTATGCAC CAGGTAGTGTGACTATATATGCCCGCAGTTTTCTGACTGGTCAGCATTAT GTAAGTTATATGTTTTTAAGGAACATTTTGGAGGTAGACTGGCGGCAGCA TTGCATCGAATGATACACTTGGTGTCTCTGCTGCTGTTGTTTTTGTTGTG GTGTTATCACGCGATATATTGTCAACGAAGTGTCAATACGAGACGGAGGC AGATTGGCAGGAACGTTGGCGTCGACGCCAACCTGTCGATGGGTGCGCTG TGACGCTGAATTGGTCAAAAATGTTATTTGTCAACCGGTGCCGCCAGCCA CATGTTAAGGACTGCGATTTTCGCAAAAGACAGCAGTACGGCAAGTACAA GAGAAAGGGAGAAATTGCACGCAGTTTCCTGGCTGGTCAAAACTACTGCA TGCCACATTTCCCTTTCCCTCTATCGTAGCAATAACTTTTGCCGCCATTC ACTGCCACAAGTAGGATCGTGTACACGGGGAGTTATGGCACTGCATCTGA GGAACTGTAAAGATGTATGATATTATATGAATGTTGTAAAACATGCTTGT GTTTTAAGAAAGGGGTGTTCACGAGAGGTTCGGATTTAATTCTTGCGAGG AGTAATCGAAAATGACACGTTAGTGTGGGCTCCGTGGAGTTGAAAAGTGG AGGACTGAATTAAGGACTCTATAGGGTAGGTGTGTAATGGGCGATCGATG GGGGCTTTCTTAATGGAGAACAAGTGCTCTATATCCATGCTTTTCGGGTA AGCAGCCTGTGACCGACCACGGAAATCGCCACATGATCGGAGGAGTACGG ACATTAGAAGGTACTGAGGAGAGATCCGAATGGTTTCCAGTGTGAAGACA ATAACAACAAAAACGACAACAATTTTTTTTTGGAGAGACAACAAAGCAG
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Coding sequence (CDS) from alignment at P-littoralis_Contig127:319384..328432+

>mRNA_P-littoralis_Contig127.73.1 ID=mRNA_P-littoralis_Contig127.73.1|Name=mRNA_P-littoralis_Contig127.73.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1056bp|location=Sequence derived from alignment at P-littoralis_Contig127:319384..328432+ (Pylaiella littoralis U1_48)
ATGCACTTCCTGAGTTTGATCTGTGCGTACACAGCGACAACAGCAGTTGT
GCTGGCTGTGGTGGCGGCCGGTGACGGTGACAGCTCGAACAGGTCGAAAA
CTTTCCCAATTCCTACAGCTACACATCAAGCAGTAACAACAGCAGGTGCA
GCAGGAGCGGCAGCACGAGCAGGAGCAGCAGCAGTAGCAGCTGCACGCAA
ACGAGAGACCCCCCCCTCGACGTCCTGGACAGAACGACCAGCATATATTC
GGCAGAGACAAACGATAGTAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
GCGAAACGCCAATTGGACGCTTTTCAACTAGCACCATCATCATCGCCACC
GTGGTGTATGATTCGCGGAGGATCGCGCATGTCCCAAAAGAGCCGGCACG
CACAAAGGGAGAGCGAGGAGCAGCAGCCAGTGAGAAACGTCTTGCTTTTC
TACCCCAACCTCATAGGCTATGCACGGGTAGCGCTAGTGCTGACGAGCTA
CTACCTCGCGGAGACGAATTGGAAAGCAAGCTCGTGCTTGTACCTGGTGG
CCTTCGCGGGTGATGCCGTAGACGGGCACGTGGCAAGAAAGTTCAATCAA
GCCTCTCGGTTCGGCGCTGTTCTGGATATGGTGACCGACCGCTGCTCAAC
GGCGGGACTGCTCCTGGTGCTGTCCCGCCTGTACGACCGCCGCCACGCCT
TTGCGTTCCTCGTGCTCATGTTCATCGACCTCTTCAGCCACTGGATGCAC
ACGCACAGCGTTGTCGACGAGCACCACAAGTCGACAGTCACCCTGAAGCG
GAGGAACATTTTGATCCGTACGTACTACGACCGCCTCCCCTTCTTCGCCT
TCTGCTGCATCGGGACCGAGCTGTTTTACGTGCTGCTGTACCTACTGCGC
TTCGTATCGCCGGGGAGCCGGGCTTTCGCCCCGTTGCGCAAGATCTGCTT
CTGGGGGTGCCTCCCCGCGTGCGTGCTGAAGCAGCTCATCAACGTCGCAC
AGATTGGCTCTGCCGCAAGGACTCTCGCCCTCGAGGAGCTAGATCAAAAA
CGCTAA
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