mRNA_P-littoralis_Contig127.67.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig127.67.2 vs. uniprot
Match: D7FMQ8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMQ8_ECTSI) HSP 1 Score: 496 bits (1276), Expect = 6.330e-170 Identity = 262/337 (77.74%), Postives = 272/337 (80.71%), Query Frame = 3
Query: 75 MVQTLG-SLAGARDPHQXXXXXSVRFSRGRALKLAFSWG----------------------------RSIEGMQKSAKKPWGKFLDAGTGTHSLKWINTLDTEGFTAVTADPQFADTTRKEIGFNVKAPDEIVVGNWRDEQFLEGRVFDTVLADYLVGAIDGFAPYYQDQVFERLKRHVAPGGSIYLVGMQPLPDHPGGAAELVCEAARLRDSCILLAGHRPYREYPLDWITRQMRKSGMVVTSAKKMPVLYAPHTVKRQLDVASRKLPIIAVTDPKLAAALEKHISALDGRVRKELAGAGGRVEVGFDYVVAAELAPEP----EERCAVSAEEKGG 986
MVQ S+AG R P Q GRA KLAF W RSIEGMQK+A KPWGKFLDAGTGTHSLKWINTL+TEGFTAVTADPQFA+ TRKEIGF VK PDEIVVGNWRDE+FLEGRVFDTVLADYLVGAIDGFAPYYQDQVFERLKRHVAPGG IYLVGMQPLPDHPGGAAELVCEAARLRDSCILLAGHRPYREYPLDWITRQM+KSGMVVTSAKKMPVLYAPHTVKRQLDVASRKLPIIA TDPKLAAALE+HIS LDGRVRKELAGAGGRVEVGFDYVVAAELA EP E + AV+ E +GG
Sbjct: 1 MVQAFELSVAGCRVPQQQQQQQHFTSRFGRAAKLAFFWSFGFGGFPQQKIRAAFPRLGMAATEDALFRSIEGMQKAANKPWGKFLDAGTGTHSLKWINTLNTEGFTAVTADPQFAENTRKEIGFKVKTPDEIVVGNWRDEKFLEGRVFDTVLADYLVGAIDGFAPYYQDQVFERLKRHVAPGGRIYLVGMQPLPDHPGGAAELVCEAARLRDSCILLAGHRPYREYPLDWITRQMKKSGMVVTSAKKMPVLYAPHTVKRQLDVASRKLPIIAATDPKLAAALERHISDLDGRVRKELAGAGGRVEVGFDYVVAAELAREPAAGAERKEAVTPEGEGG 337
BLAST of mRNA_P-littoralis_Contig127.67.2 vs. uniprot
Match: A0A835Z2H5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2H5_9STRA) HSP 1 Score: 307 bits (786), Expect = 4.190e-97 Identity = 145/269 (53.90%), Postives = 203/269 (75.46%), Query Frame = 3
Query: 189 RSIEGMQKSAKKPWGKFLDAGTGTHSLKWINTLDTEGFTAVTADPQFADTTRKEIGFNVKAPDE------IVVGNWRDEQFLEGRVFDTVLADYLVGAIDGFAPYYQDQVFERLKRHVAPGGSIYLVGMQPLPDHPGGAAELVCEAARLRDSCILLAGHRPYREYPLDWITRQMRKSGMVVTSAKKMPVLYAPHTVKRQLDVASRKLPIIAVTDPKLAAALEKHISALDGRVRKELAGA-GGRVEVGFDYVVAAELAPEPEERCAVSAE 974
+++ G+Q ++ KPWG+FLD+GTGTHSL+W++TL T G+TAVTAD QFA + E+ + I+VGNW+DE F EG ++DT+LADYL+GAIDGF+PYYQD++F+RLKRH+APGG+++++GMQP+PD A +V E ARLRD+CILLAGHRPYRE+PLDW+ R ++K+G VT +++MP+L++ +++RQLDVASRKLP D LAAA+E+HI+A+ R+ + GGR+++GFDYVVAAE P P A S+E
Sbjct: 8 KAVTGLQTASGKPWGRFLDSGTGTHSLRWVHTLPTAGWTAVTADAQFAANMQAELQLTDAERAQASTAACIIVGNWQDESFQEGEIYDTILADYLIGAIDGFSPYYQDEIFDRLKRHLAPGGTLFIIGMQPVPDSAPHPANIVTEVARLRDACILLAGHRPYREFPLDWVERHLKKAGFAVTLSRRMPILHSEGSIRRQLDVASRKLPYFE--DRDLAAAMERHIAAVGARIVSTCSCVRGGRIQLGFDYVVAAEPLPRPPGAAAASSE 274
BLAST of mRNA_P-littoralis_Contig127.67.2 vs. uniprot
Match: A0A7R9U2U4_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U2U4_9STRA) HSP 1 Score: 253 bits (645), Expect = 3.250e-75 Identity = 126/254 (49.61%), Postives = 171/254 (67.32%), Query Frame = 3
Query: 192 SIEGMQKSAKKPWGKFLDAGTGTHSLKWINTLDTEGFTAVTADPQFADTTRKEIGFNVKAPDEIVVGNWRDEQFLEGRVFDTVLADYLVGAIDGFAPYYQDQVFERLKRHVAPGGSIYLVGMQPLPDHPGGAAELVCEAARLRDSCILLAGHRPYREYPLDWITRQMRKSGMVVTSAKKMPVLYAPHTVKRQLDVASRKLPII-----AVTDPKLAAALEKHISALD-----GRVRKELAGAGGRVEVGFDYVV 923
SIE MQ +PWG+FLDAGTG HSL WI+T++TE +TAVTA + A +R + ++ D +VVGNW D+ FLEG FD +LADYL+GA+DGF+PY QD +FERL+RH+A G +Y+VG++P+PD GAA+++CE R+RD+ ILLAGHR YREYP++WI RQ R+SG V + K P+LY+ ++ RQLDV RKLP+I A T L+ A + +D +V A R+ GFDYV+
Sbjct: 73 SIERMQARIGRPWGRFLDAGTGRHSLHWISTIETEAWTAVTAAQEMAVQSRDSVRGAMREQDRVVVGNWDDDTFLEGETFDVILADYLIGAMDGFSPYKQDLIFERLQRHLAEDGILYIVGLEPIPDSGAGAADVICEVRRMRDAMILLAGHRCYREYPIEWIYRQCRRSGFEVMESLKFPILYSRASITRQLDVGRRKLPLIRSRHGAATALALSQACDALQHRIDDATNFSKVSPSGVTADTRIRFGFDYVM 326
BLAST of mRNA_P-littoralis_Contig127.67.2 vs. uniprot
Match: A0A7S1UJN4_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UJN4_9STRA) HSP 1 Score: 252 bits (643), Expect = 7.910e-75 Identity = 127/255 (49.80%), Postives = 170/255 (66.67%), Query Frame = 3
Query: 195 IEGMQKSAKKPWGKFLDAGTGTHSLKWI-NTLDTEGFTAVTADPQFADTTRKEIGFNVKAPDEIVVGNWRDEQFLEGRVFDTVLADYLVGAIDGFAPYYQDQVFERLKRHVAPGGSIYLVGMQPLPDHPGGAAELVCEAARLRDSCILLAGHRPYREYPLDWITRQMRKSGMVVTSAKKMPVLYAPHTVKRQLDVASRKLPII-AVTDPKLAAALEKHISALDGRV---------RKELAGAGGRVEVGFDYVVA 926
IE MQ ++PWG+FLDAGTG+HSL+WI DT+ +TAVTA + A +R + +++ D++V+GNW DE FLEG V+D +LADYL+GA+DGF+PY QD +FERLKRH+AP G IY+VG++P+PD GAA+++CE RLRD+ ILLAGHR YREYPL WI RQ R++G V + P+LY+ ++ RQLDV RKLP I A A A+ + L R+ + R+ GFDYVVA
Sbjct: 79 IERMQMQQQRPWGRFLDAGTGSHSLQWIARNFDTDSWTAVTAAEEMAKQSRDSVKGHMREQDKVVIGNWDDETFLEGEVYDVILADYLIGAMDGFSPYTQDLIFERLKRHLAPDGVIYIVGLEPIPDTAEGAADVICEVRRLRDAMILLAGHRCYREYPLTWIYRQCRRAGFEVLESTTFPILYSRASITRQLDVGRRKLPYIRAKHGSSTAIAMGQACEMLQRRIDDATNHNTSKTSAVKTDTRIRFGFDYVVA 333
BLAST of mRNA_P-littoralis_Contig127.67.2 vs. uniprot
Match: A0A7S1Y0Y4_9STRA (Hypothetical protein n=6 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1Y0Y4_9STRA) HSP 1 Score: 252 bits (643), Expect = 1.700e-74 Identity = 127/255 (49.80%), Postives = 170/255 (66.67%), Query Frame = 3
Query: 195 IEGMQKSAKKPWGKFLDAGTGTHSLKWI-NTLDTEGFTAVTADPQFADTTRKEIGFNVKAPDEIVVGNWRDEQFLEGRVFDTVLADYLVGAIDGFAPYYQDQVFERLKRHVAPGGSIYLVGMQPLPDHPGGAAELVCEAARLRDSCILLAGHRPYREYPLDWITRQMRKSGMVVTSAKKMPVLYAPHTVKRQLDVASRKLPII-AVTDPKLAAALEKHISALDGRV---------RKELAGAGGRVEVGFDYVVA 926
IE MQ ++PWG+FLDAGTG+HSL+WI DT+ +TAVTA + A +R + +++ D++V+GNW DE FLEG V+D +LADYL+GA+DGF+PY QD +FERLKRH+AP G IY+VG++P+PD GAA+++CE RLRD+ ILLAGHR YREYPL WI RQ R++G V + P+LY+ ++ RQLDV RKLP I A A A+ + L R+ + R+ GFDYVVA
Sbjct: 105 IERMQMQQQRPWGRFLDAGTGSHSLQWIARNFDTDSWTAVTAAEEMAKQSRDSVKGHMREQDKVVIGNWDDETFLEGEVYDVILADYLIGAMDGFSPYTQDLIFERLKRHLAPDGVIYIVGLEPIPDTAEGAADVICEVRRLRDAMILLAGHRCYREYPLTWIYRQCRRAGFEVLESTTFPILYSRASITRQLDVGRRKLPYIRAKHGSSTAIAMGQACEMLQRRIDDATNHNTSKTSAVKTDTRIRFGFDYVVA 359
BLAST of mRNA_P-littoralis_Contig127.67.2 vs. uniprot
Match: A0A7S1UJN8_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UJN8_9STRA) HSP 1 Score: 247 bits (631), Expect = 1.950e-73 Identity = 124/248 (50.00%), Postives = 166/248 (66.94%), Query Frame = 3
Query: 216 AKKPWGKFLDAGTGTHSLKWI-NTLDTEGFTAVTADPQFADTTRKEIGFNVKAPDEIVVGNWRDEQFLEGRVFDTVLADYLVGAIDGFAPYYQDQVFERLKRHVAPGGSIYLVGMQPLPDHPGGAAELVCEAARLRDSCILLAGHRPYREYPLDWITRQMRKSGMVVTSAKKMPVLYAPHTVKRQLDVASRKLPII-AVTDPKLAAALEKHISALDGRV---------RKELAGAGGRVEVGFDYVVA 926
A +PWG+FLDAGTG+HSL+WI DT+ +TAVTA + A +R + +++ D++V+GNW DE FLEG V+D +LADYL+GA+DGF+PY QD +FERLKRH+AP G IY+VG++P+PD GAA+++CE RLRD+ ILLAGHR YREYPL WI RQ R++G V + P+LY+ ++ RQLDV RKLP I A A A+ + L R+ + R+ GFDYVVA
Sbjct: 57 AARPWGRFLDAGTGSHSLQWIARNFDTDSWTAVTAAEEMAKQSRDSVKGHMREQDKVVIGNWDDETFLEGEVYDVILADYLIGAMDGFSPYTQDLIFERLKRHLAPDGVIYIVGLEPIPDTAEGAADVICEVRRLRDAMILLAGHRCYREYPLTWIYRQCRRAGFEVLESTTFPILYSRASITRQLDVGRRKLPYIRAKHGSSTAIAMGQACEMLQRRIDDATNHNTSKTSAVKTDTRIRFGFDYVVA 304
BLAST of mRNA_P-littoralis_Contig127.67.2 vs. uniprot
Match: A0A7S2XXT9_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXT9_9STRA) HSP 1 Score: 241 bits (615), Expect = 1.950e-71 Identity = 128/281 (45.55%), Postives = 181/281 (64.41%), Query Frame = 3
Query: 147 FSRGRALKLAFSWGRSIEGMQKSAKKPWGKFLDAGTGTHSLKWINT------LDT--------EGFTAVTADPQFADTTRKE--IGFNVKAPDEIVVGNWRDEQFLEGRVFDTVLADYLVGAIDGFAPYYQDQVFERLKRHVAPGGSIYLVGMQPLPDHPGGAAE-LVCEAARLRDSCILLAGHRPYREYPLDWITRQMRKSGMVVTSAKKMPVLYAPHTVKRQLDVASRKLPIIAVTDPKLAAALEKHISALDGRVRKELAGA-GGRVEVGFDYVVAAEL 935
FS R L F+ I MQ+ KPWGKFLDAGTG HS+KW+++ LD+ E + VTA + A R++ + ++ D +V+GNW D L+G FDTVLADYL+GA+DGF+PY QD + RLK+H+APG +Y++G++PLPD AE +VCE R+RD+CILLAGHR YRE+PL+W R + SG V +KK+P++Y+ ++KRQ+DVASRKLP D L + + +HI L RVR+ ++ RV +GFDY+++AE+
Sbjct: 11 FSARRTLPTPFA---EITRMQQECGKPWGKFLDAGTGLHSMKWVSSRGRSGGLDSNEDPVGGLESWCGVTASWEDAQKIRQDPQVSGVMQDSDSVVLGNWDDPDLLKGMTFDTVLADYLIGAMDGFSPYKQDLMLPRLKQHMAPGARLYIIGLEPLPDKSQNPAEDIVCEVRRVRDACILLAGHRCYREFPLEWTERHLTGSGFRVVESKKLPIMYSFQSIKRQIDVASRKLPFFK--DKALVSVMRQHIDQLTERVREAVSSTPNSRVRLGFDYIISAEV 286
BLAST of mRNA_P-littoralis_Contig127.67.2 vs. uniprot
Match: A0A7S3GT58_9STRA (Hypothetical protein (Fragment) n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GT58_9STRA) HSP 1 Score: 236 bits (603), Expect = 6.170e-70 Identity = 116/260 (44.62%), Postives = 162/260 (62.31%), Query Frame = 3
Query: 222 KPWGKFLDAGTGTHSLKWINTLDTEGFTAVTADPQFADTTRKEIGF--NVKAPDEIVVGNWRDEQFLEGR-VFDTVLADYLVGAIDGFAPYYQDQVFERLKRHVAPGGSIYLVGMQPLPDHPGGAAELVCEAARLRDSCILLAGHRPYREYPLDWITRQMRKSGMVVTSAKKMPVLYAPHTVKRQLDVASRKLPIIAVTDPKLAAALEKHISALDGRVRKELAGAGGRVEVGFDYVVAAELAPEPEERCAVSAEEKGGKE 992
K WGK LDAGTG HS+KWI L G+TA+TAD + KE G ++ D ++VGNW DE F EG FDT+LADYL+GA+DGF+PY QD++ +LKRH+ P G +Y++GM P+PD P ++ E R RD+CILL GHRPYRE+PLDW+ R + + VT +K +L++ + RQ+ V KL ++ D L + +EK++ L+ R R+ + AGGR+ + FDYV++AE A A GG E
Sbjct: 21 KAWGKILDAGTGVHSIKWIQGLTNSGWTAITADTGMRNQMMKESGVAAQMRPQDSVIVGNWMDEAFCEGLGTFDTILADYLIGAVDGFSPYQQDEILVKLKRHLTPEGRLYIIGMNPIPDEPAPPGNIISEIRRARDACILLGGHRPYREFPLDWMRRHLTSAQFSVTGSKNFTILHSEDSAVRQIRVGQSKLSLMDNAD--LRSGMEKYMVDLEARTRQAVRAAGGRIPLSFDYVISAEHTEHFNAHAAEDATTAGGAE 278
BLAST of mRNA_P-littoralis_Contig127.67.2 vs. uniprot
Match: A0A2E7UX52_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2E7UX52_9DELT) HSP 1 Score: 224 bits (572), Expect = 1.040e-65 Identity = 122/242 (50.41%), Postives = 160/242 (66.12%), Query Frame = 3
Query: 219 KKPWGKFLDAGTGTHSLKWINTLDTEGFTAVTADPQFADTTRKEIGFN-VKAPDEIVVGNWRDEQFLEGRVFDTVLADYLVGAIDGFAPYYQDQVFERLKRHVA-PGGSIYLVGMQPLPDH---PGGAAELVCEAARLRDSCILLAGHRPYREYPLDWITRQMRKSGMVVTSAKKMPVLYAPHTVKRQLDVASRKLPIIAVTDPKLAAALEKHISALDGRVRKELAGAGGRVEVGFDYVVAA 929
++ WG+ LDAGTG HSL+WI +L+T G+TAVT + +G + ++A D IV GNW DE L G VFD VLADYL+GAIDGFAPY+Q ++FERL+ HV G +Y+VG++P PD PGG +LV E ARLRD+CILLAGHR YREYP +W+ R + ++G V S++ +P++Y V QLDV RKLP I TD L A+L+ HI +L R L G + G DYV+AA
Sbjct: 20 ERSWGRVLDAGTGMHSLQWIRSLETAGWTAVTGAVSRQQDLERRLGADGMRATDRIVTGNWTDEALLRGEVFDVVLADYLLGAIDGFAPYFQTRLFERLRSHVRRESGRLYVVGLEPYPDRAADPGG--QLVLEIARLRDACILLAGHRCYREYPREWVHRTLAQAGFEVDSSEAIPIVYRRRFVDGQLDVCVRKLPFI--TDLGLRASLKAHIESLRTRAHAHLLRVG-TIPFGADYVIAA 256
BLAST of mRNA_P-littoralis_Contig127.67.2 vs. uniprot
Match: A0A835ZLB4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLB4_9STRA) HSP 1 Score: 224 bits (571), Expect = 1.170e-65 Identity = 98/189 (51.85%), Postives = 151/189 (79.89%), Query Frame = 3
Query: 378 EIVVGNWRDEQFLEGRVFDTVLADYLVGAIDGFAPYYQDQVFERLKRHVAPGGSIYLVGMQPLPDHPGGAAELVCEAARLRDSCILLAGHRPYREYPLDWITRQMRKSGMVVTSAKKMPVLYAPHTVKRQLDVASRKLPIIAVTDPKLAAALEKHISALDGRVRKELAGA-GGRVEVGFDYVVAAELAP 941
++VVG+W+D+ L+G FD+V+ADYL+GA++ +PY+QDQ+F+RL+RH+APGG +Y+VGMQPLPD GAA++V E RLRD+C++LAGHRPYREYP+DW+ R +R +G+ VT+A+++P+LY+ +++RQLD+A+R+L I+ D +A+ALE+HI + R++ A GG +++GFDY++ AE AP
Sbjct: 4 QVVVGSWQDKSLLQGEQFDSVIADYLIGALNIHSPYFQDQIFQRLRRHIAPGGRLYVVGMQPLPDTAPGAADIVIEVGRLRDACLMLAGHRPYREYPMDWVERHLRAAGLAVTAARRLPILYSEGSIQRQLDMAARRLSFIS--DRDVASALERHIGDIQRRMKGICAAVRGGHIQLGFDYIIVAEAAP 190 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig127.67.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig127.67.2 >prot_P-littoralis_Contig127.67.2 ID=prot_P-littoralis_Contig127.67.2|Name=mRNA_P-littoralis_Contig127.67.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=359bp MVQTLGSLAGARDPHQHQHQHSVRFSRGRALKLAFSWGRSIEGMQKSAKKback to top mRNA from alignment at P-littoralis_Contig127:303706..313808+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig127.67.2 ID=mRNA_P-littoralis_Contig127.67.2|Name=mRNA_P-littoralis_Contig127.67.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=10103bp|location=Sequence derived from alignment at P-littoralis_Contig127:303706..313808+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig127:303706..313808+ >mRNA_P-littoralis_Contig127.67.2 ID=mRNA_P-littoralis_Contig127.67.2|Name=mRNA_P-littoralis_Contig127.67.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1077bp|location=Sequence derived from alignment at P-littoralis_Contig127:303706..313808+ (Pylaiella littoralis U1_48)back to top |