mRNA_P-littoralis_Contig126.71.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_P-littoralis_Contig126.71.1
Unique Name	mRNA_P-littoralis_Contig126.71.1
Type	mRNA
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))

Homology

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BLAST of mRNA_P-littoralis_Contig126.71.1 vs. uniprot
Match: A0A6H5KTG1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTG1_9PHAE)

HSP 1 Score: 338 bits (866), Expect = 1.000e-98
Identity = 241/528 (45.64%), Postives = 303/528 (57.39%), Query Frame = 1

Query:  394 DMTVVEGYVFEHALLWKSKSNSVGGYLNLDGGNQQQEVPAAQHPQLQQQQKPGPPRVSVTLSEYLSAGSPNPDPSCDFGWFTPTASVSSLLSAGDVATTSYMLEDQEPVYRAP-SPAHHPTNFLFARNTSSASAAKTVTLSPES-VLGCGGXXXXXXXKSN----RRVSYTTTASEGECCNGSIPTQESASLSQKQ-----RSLQLVLSADASNGNSRGNGSYRRGS--TGCGGAGVRGSAVDDGVPDGRSNTTMGVRLLPVACSRSTTTHLNSWHTLYSEASESGNLSSH---GKATLHLKRAGYLISTRHFPEKSPMPLAPRSTGEAAGISASGGGGGV---GGPVGRRRSATPFSCSSAVQHAQEMHRARLRXXXXXXXXXXXXKPKSYSWSITEIRV-----RQGQPFQPPFAQYLVVVCVGREKLVAGWRRTSEFEKLAQVARAVKMSKACLAWDALEKARRMHGGGPCSIPFVVRTRRLDAAYLQNKARFLEEFLKQYLFEANNKEALLSFVDTRKPATMEL 1905
            D T VEGYV EHAL WKS  NSV GYLN  GG        A   QLQ+      P+VSVTLSEYLSA SP+ DPSCD+GW+TPTAS SSL +A + A        QE  Y AP SP+ +P++  +  N +   +  TV+LSPES VLG GG        ++    + +   T+    +  +  I   +  S S ++         L L   +SN +  G   + RG   +G   +G R    +       S  ++GVRLLPV  +RSTTTHLNSWH LY   S SG LS+    GK T+H++R  + ISTRHFPEK P P   +   +    S S  G G    G P+ + R                       XXXXXX      +P SYSW++TEIRV     R      PP+AQYLVVVC+GREKLVAGWRR S+FEKLA  A    M K+C+AW+ALE+ARR  GGGPC++P V+R RRLD+ YLQNKARFLEEFLKQY FEA +K+ALLSF+D +KPAT E+
Sbjct:   21 DTTFVEGYVVEHALRWKS--NSVAGYLNAGGGIDVGAGAPADVAQLQRA-----PKVSVTLSEYLSAASPHADPSCDYGWYTPTASASSLPAAENSA--------QEGCYPAPPSPSAYPSSLPWRCNRADVESTVTVSLSPESIVLGGGGDSSTKVHGADSGEGKNLPRDTSPDGFKEHSSIINNGDGGSFSMRKPXXXXXXXXLALVPRSSNVSFGGGIGWGRGGDRSGACASGQRLIEANAAAAAESSAGSIGVRLLPVTKARSTTTHLNSWHPLYPTVSSSGRLSAESCSGKCTMHIRRTSFPISTRHFPEKPPTPPNKKRRSDRTARSGSSWGSGRPLNGSPLLQGR---XXXXXXXXXXXXXXXXXXXXXXXXXXESPKAGRPTSYSWAVTEIRVIRPDLRFPLGLAPPYAQYLVVVCMGREKLVAGWRRASDFEKLAATASKAWMPKSCVAWEALERARRGDGGGPCNMPVVLRPRRLDSVYLQNKARFLEEFLKQYFFEAGSKDALLSFLDLKKPATAEV 530

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BLAST of mRNA_P-littoralis_Contig126.71.1 vs. uniprot
Match: D8LDV4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDV4_ECTSI)

HSP 1 Score: 170 bits (430), Expect = 1.790e-43
Identity = 79/111 (71.17%), Postives = 97/111 (87.39%), Query Frame = 1

Query: 1573 QYLVVVCVGREKLVAGWRRTSEFEKLAQVARAVKMSKACLAWDALEKARRMHGGGPCSIPFVVRTRRLDAAYLQNKARFLEEFLKQYLFEANNKEALLSFVDTRKPATMEL 1905
            +YLVVVC+GREKLVAGWRR S+FEKLA +AR   M K+C+AW+ALE+ARR+ GGGPC++P V+R RRLD+ YLQNKARFLEEFLKQY FEA +K+ALLSF+D +KPAT E+
Sbjct:  161 KYLVVVCMGREKLVAGWRRASDFEKLAAIARKAWMPKSCVAWEALERARRVDGGGPCNMPVVLRPRRLDSVYLQNKARFLEEFLKQYFFEAGSKDALLSFLDLKKPATAEV 271

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig126.71.1 vs. uniprot

BLAST of mRNA_P-littoralis_Contig126.71.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5KTG1_9PHAE	1.000e-98	45.64	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LDV4_ECTSI	1.790e-43	71.17	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig126	contig	P-littoralis_Contig126:295073..309481 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	1
Start	1
Seed ortholog	2880.D7FHG1
PFAMs	zf-RING_2
Model size	4624
Max annot lvl	2759\|Eukaryota
Hectar predicted targeting category	other localisation
Exons	3
Evalue	5.5e-08
EggNOG OGs	2C38U@1\|root,2RHZN@2759\|Eukaryota
Ec32 ortholog description	hypothetical protein
Ec32 ortholog	Ec-08_003500.1
Cds size	1593

Relationships

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680789556.2780085-UTR-P-littoralis_Contig126:295072..295387	1680789556.2780085-UTR-P-littoralis_Contig126:295072..295387	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig126 295073..295387 +
1680789556.318425-UTR-P-littoralis_Contig126:306765..309481	1680789556.318425-UTR-P-littoralis_Contig126:306765..309481	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig126 306766..309481 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680789556.2896655-CDS-P-littoralis_Contig126:295387..296755	1680789556.2896655-CDS-P-littoralis_Contig126:295387..296755	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig126 295388..296755 +
1680789556.2999833-CDS-P-littoralis_Contig126:306057..306174	1680789556.2999833-CDS-P-littoralis_Contig126:306057..306174	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig126 306058..306174 +
1680789556.3087397-CDS-P-littoralis_Contig126:306657..306765	1680789556.3087397-CDS-P-littoralis_Contig126:306657..306765	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig126 306658..306765 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig126.71.1	prot_P-littoralis_Contig126.71.1	Pylaiella littoralis U1_48	polypeptide	P-littoralis_Contig126 295388..306765 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at P-littoralis_Contig126:295073..309481+
coding sequence from alignment at P-littoralis_Contig126:295073..309481+

protein sequence of mRNA_P-littoralis_Contig126.71.1

>prot_P-littoralis_Contig126.71.1 ID=prot_P-littoralis_Contig126.71.1|Name=mRNA_P-littoralis_Contig126.71.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=531bp
MVLSQEDFPPTLDRKEWEGDVDSREEDMTVVEGYVFEHALLWKSKSNSVG
GYLNLDGGNQQQEVPAAQHPQLQQQQKPGPPRVSVTLSEYLSAGSPNPDP
SCDFGWFTPTASVSSLLSAGDVATTSYMLEDQEPVYRAPSPAHHPTNFLF
ARNTSSASAAKTVTLSPESVLGCGGGDGGGGNKSNRRVSYTTTASEGECC
NGSIPTQESASLSQKQRSLQLVLSADASNGNSRGNGSYRRGSTGCGGAGV
RGSAVDDGVPDGRSNTTMGVRLLPVACSRSTTTHLNSWHTLYSEASESGN
LSSHGKATLHLKRAGYLISTRHFPEKSPMPLAPRSTGEAAGISASGGGGG
VGGPVGRRRSATPFSCSSAVQHAQEMHRARLRRQEQQQQQQPRIKPKSYS
WSITEIRVRQGQPFQPPFAQYLVVVCVGREKLVAGWRRTSEFEKLAQVAR
AVKMSKACLAWDALEKARRMHGGGPCSIPFVVRTRRLDAAYLQNKARFLE
EFLKQYLFEANNKEALLSFVDTRKPATMEL*

mRNA from alignment at P-littoralis_Contig126:295073..309481+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_P-littoralis_Contig126.71.1 ID=mRNA_P-littoralis_Contig126.71.1|Name=mRNA_P-littoralis_Contig126.71.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=14409bp|location=Sequence derived from alignment at P-littoralis_Contig126:295073..309481+ (Pylaiella littoralis U1_48)
CGAATAATCTGTGTCGCGGCGAAACCGACGAGCAGAGCTCTCAACAGCCT
GCAGGGTCGGGCCCTCTTAACAGTAGTTCAACTTCCGCATGCCATCCGCT
CTAATAAAAAAACTATGATGTTTTTCTCTGCGTTTTTCTTTTTCTTGGCA
CTCTATTTTTTTATATGATGCCGTACGTATTTGGATTCAGAGCGAACAGC
AAACCACGGGACACATCGATATTCACAAATCATCAAATCAACGTCAAAGG
CCATCAGATCGCAACAGATTTGCTTCCGTTTCATTTGTTGATGAACCCGA
CGCCCCTCCGTAATCATGGTACTCTCCCAGGAGGATTTCCCCCCGACGCT
CGACAGGAAGGAGTGGGAAGGAGATGTCGATTCCCGCGAGGAGGATATGA
CTGTGGTCGAGGGCTACGTGTTCGAGCACGCCTTGCTTTGGAAAAGTAAG
TCGAACTCGGTTGGAGGTTATCTCAATTTGGACGGCGGAAATCAACAGCA
GGAAGTTCCCGCTGCGCAGCATCCGCAGCTGCAGCAGCAGCAGAAGCCAG
GGCCGCCGAGGGTGAGCGTTACCCTTTCCGAGTACCTCTCAGCCGGCTCG
CCCAATCCGGATCCCTCGTGCGACTTCGGCTGGTTCACCCCCACGGCCTC
CGTGAGCTCGCTCTTGTCAGCGGGAGACGTCGCTACAACTTCGTATATGC
TAGAAGATCAGGAGCCCGTTTACCGTGCCCCCAGCCCTGCCCATCATCCT
ACAAACTTCCTTTTCGCGCGCAACACCAGCTCAGCGTCTGCCGCGAAGAC
GGTTACCCTCTCGCCTGAGTCCGTGCTTGGTTGCGGCGGGGGTGATGGAG
GGGGGGGCAACAAAAGCAACCGGCGAGTTTCGTACACAACAACAGCTTCA
GAGGGAGAATGCTGTAACGGCAGCATCCCCACCCAGGAATCTGCCTCTTT
GTCCCAGAAACAGCGGTCACTGCAGCTTGTTCTATCAGCAGACGCGAGCA
ACGGCAATTCCAGAGGCAACGGCAGTTACAGGAGAGGAAGCACTGGTTGT
GGCGGGGCAGGGGTGAGAGGTAGCGCGGTGGATGATGGCGTGCCCGATGG
TCGCAGCAACACCACCATGGGCGTACGCTTACTTCCAGTCGCGTGCAGCA
GGAGCACGACGACGCACCTGAATTCCTGGCACACGCTGTACTCAGAGGCG
TCGGAATCGGGAAACCTCTCGTCTCATGGAAAAGCGACTTTGCATCTCAA
GAGGGCAGGCTACCTCATCTCTACCAGGCATTTCCCGGAGAAGTCACCCA
TGCCTCTTGCGCCGCGATCAACGGGAGAGGCTGCTGGCATTAGCGCCAGC
GGCGGCGGGGGCGGGGTTGGGGGCCCGGTAGGCCGGCGTCGAAGCGCAAC
ACCATTCAGCTGTTCTTCTGCGGTTCAACACGCGCAAGAGATGCACAGAG
CTCGTCTGCGGCGGCAGGAACAGCAGCAGCAGCAGCAGCCCAGAATCAAA
CCGAAGAGTTACAGCTGGTCCATCACGGAGATTCGGGTGAGACAGGGGCA
GCCCTTCCAGCCCCCGTTCGCTCAGTACCTCGTAGTGGTTTGCGTGGGGC
GAGAGAAGCTGGTGGCCGGGTGGAGGCGGACCTCGGAGTTCGAGAAGCTT
GCTCAGGTCGCCCGCGCGGTGAAGATGTCAAAGGTACAGAGAGAGTACTT
CTGTATGATGTTATGTGCGAAATAGGATGCGTGTTCATCCTTTGCGCACA
GCAGTGGGTATGTCAATAGTTTGGTTGCTCCCGCTGTTGTCGTCTCTGCC
GTGTTTTCCGCTCCTTCTGTACTTCTTTATACCAAGTATTCCCGCAGGCT
TGAAATAAGTTCTTTGAAGCAATGAACGCGCATTTTGGAAGCACACAGCA
ACAGAGTTCAAAGGTCAAATGGTGATATCATACACATGCATCTGCCTCGA
AGTTTGTACAGCAGTGTCCATCATACTGCTGCACTGCCGCACGTACGTGA
CACTCATTTTGATTCACGGCTGCAGCAGCTACCAGTCAGCCCGCTGGACA
CACTCCTCCTCGATTCAGGTGGTGTGGTATCTCACGTCACACGGACTGCG
TGCATCACCTACTTCCACTTTTTAGGCCCTGTGTAAACGAAAGTGGAAAA
ATCATTATTGGAAAATATCACTGTCATGAAGGTCTCTGATTGGCCAAGCT
TTTATCACCTTCCGACGACGCCAATGATTTTCCGAAAAACCCTTCGAGAC
CGAAGAAGTCCAAAAAGACTTAATTTGAAGAAAATCAGTAATCATTATTG
TAGTTCTTCACCCGATCGAAGGCTTTTTCTTAACGATGTGCCTCGCGCAC
GAGGCCGGCCAGACCAAATACTACCGAGGCAACCAACAGCATTGCCACAG
AACATGACATGGAGGTTTGCCGCTGCACCAGGCAAGCCAACGTTATTACC
ACACATGACAGCGCAACAAACAAATACACCAGTTTGCATGATTGATGACG
ACGACCCACATTTCATTTTGCACAACACACCATCATCTCACATCCCATGG
CAGACAGACACATGATACAGCAGCAGTCTTGAGTGCATGAGCCAACACAC
ATACACACCGCACACGTCTACAAACGGCGTGTCTTGTCAGCATCAAGGCT
TGGTGCCCAGAGCCTACGACCTTGCCGTGCACGCGAGAGGACGCACATGA
TGCGTCCAAGTACTGCTGTACTGCTGTATTGTGTACAGCAGTATATTTTA
TTGTTCTATTTTACCCGTCGTGTCGTCATCATCAGAGGTTTGCATTCTGC
TGGCGTTTACAGGCCTTTCAAAGAGCCTTTTCAGCTCTTTCGTTAAAATG
GCTCGAAATGTTTTTCGGAAAATCATACGGAGTACTTGGTACTATGACAA
TGATTTCAATAACGATTTTCCGACTTCCGTTAAGACAGGGCCTTACAGCG
GTACAGTACCGGCCCGCTCACAAGAAATTTGGCGTAAGAAAACGGGCTCG
GCAGCCGGCGCCTCACTAAATCCTGTACGATGGTTAAGAAATAGCCATAC
TTAATGCTGGTGACACAACAAGAAGCCGAGGCTGAGGCTGATTTCCAGTT
TCTTATAAGCGGGCCGGCACTGTATACGATGTAAATACAGCGGGATCATA
CCGGTACCGCTGTACTCTCTTGGGTCCAAAACACCACCGGGTACTTTCGT
TTATACAGGCCCAGAATTTGATGGGATAACAACGCAACACACATACAGAG
TACCCACGACACACAGATTGGTGCTGTGCATCTGTATCGTACGTATGATT
TTGCAGAGAGTGCGGGAGGGAGAGGAAAGATTTAGAAGTCATCTCGTATA
TGGGATGTGACGAGTATTTCAAAACTCGCAGGCACTTGAAAGCAGAAGGG
CGCGCGAATATTTTTATGCATGTTCGGGGAGGCGTACACCAACGACTTGT
ATATGCCCGCCGTCGGTGTAGTGTACGTTTCGTGCACGATTCACTCTTTT
AGAGAACTCAACATAGCGGTATTCCACGGAGTCCTGCCTCAGGTGGTTGT
TCTTTCTTGGATGTTCCTCCGGTTGCTCTTAGAACTGAGGGTGGCTCTTG
TCAAAGCGTTTTGGGCCCATTCAAAAATCAAAAATCAAAAAATCAAACTC
AAAATACATCACTGATAGATCAATAATTCATCCGCCCGCACCACGTTTTG
GATTTCAGTTTTATTCTTTCGAAACGGGAAGGAAAGTAATAAACACTTTC
CTTCCCGCCATCAGATCACAAACGCGGCTCAAAAACGACCAGACCTAGAA
TATGAGACAGGGAGGTGTTTGCTGTGCATTCCGGGAGCACATGGTGCACA
CTACATATGCTTGCTTAGCTGACCACAGCACAACGTGCAGACCCCGGTTG
TACACATGTGCTAGCTCCGGAGAAAGCTGGTATTACGCAGAATACATGTC
ACTTTGTTTGAGCGAATTCCGACCAGAATCTGGAGAGCAGCACTCAAGTG
TGTAGAAGTGTGCAGGAATCAACTGCTGTTTGCGTAGCTGACACAGCCGC
TTACCTCCAAAAAAGGGCAGATGTGCAACACGTACTTACTCATCTCTTGC
CGAGTTTTTCGGTTATCGATCCCGAACAAAGAACTACCAACGCGCCTGAG
GCAGGGCGACGTGGGGCACCATCGTGCTCTTCGTTTGAGGCACGACAGCT
CCCGCACTTGTCTTGGAATCGAGACACGGCATGCTCATGTCACACACCAC
CTGTCTGTGACCCCTGTTTTTTTTTACTTTATCCGCTTTTGATTTTGGAC
AAACGCAAGCTGCAGCAGATCGGACCCAACACGGAATCAAAGTCAAAATC
CAATTTTGTTTTTGATTTTGAATGTGTGTGTGTTGTCATCCCTTTAATTG
GACGCCACTCTACACCTTTTGGCTAGGTAGACGCTCCAACCGGGGTCACA
CAGGGGGAAGTCAACACAGGAGTTTGTTTTTTTTGCTCCACTTCCCTCTG
CTGTGCTTGCTTTTTGGTTGAGCTTTTATCGCGAGAAAGGGGGCAGCAAT
CCCTTTCCCTCGTCGATGGTACGATCGAATTTTGTTTACTCACGAATTGA
TCGCTTTCCACTTTCACGCGCAATGTGAGAAAAAAAACCAGATCGTGTTA
CTGCACTGGGATTCGAACTCACGCGTGAATGTCAGAAGGTTGCGTGGATA
ACCAACTGAACCACCGGGGCGACCGATACGGTCAATAATTTGTCAAGAGC
CATCGTGAGGGTGGCGTTTGTCCCCGAAATAAACCCAATCGAAATCGAAA
ATCGAAATCGAAAAAACTTCTGGTTGTCCGAACTTCCCTCCGCACATGCG
GGGTATCCAGCAGGTTTTCGATTTCGCCCTTATTCTTCGGAAAGCTAAAG
GAAAGGGTAGAATCGAAAAAATCCGAGTTTAGAATCTAAAATGCGGCTCA
AAAATCGATTAGACCTAGAACACGAGCAGAGAGGTGTTTGCTGTGCTTTC
TGGAAGAACACGGGTGCACATCGATGTGTCTTTGCTTACTTGGTTACAGC
CCAACTTGTATCCCCCTGTTGTCCGTATGTGTAACCTCGGTAGAAGGCGG
GTGTCCCGTACAATACAGTTCACTTTGTCTGAGCGGATTTCGATAATAAT
CCGGAAAGCACCACAGGTGTGCAGAAGTGTGCAGACAACAGGAACTGCTG
GTATTGCTCACGACTCTCATACTAGTACATACATGGTGCTGCTGTGCATT
TCGATATCAACACCGGTATGCTTTTACTCACAACACAACTTCTTGTAGCT
GCCTGTTGTACACAAACGGTACCTCCACACGAAGATGGTAATGCCAACTG
CAAAGAAGGGAACTCTGTCTGAGGGGGTCTGCCGAGATGCTAGCGAGCTC
ATCCGAGTAGCATACCTGGTGTCGCTCTGCAGAGAATATGTACAACAACG
GCTGAATGCGTGGGCTTCGTTGACTCTCTGAAAAGGGTCAAGTAGGGGTA
TGTAGGGTATGCTGGTGAGCAACACGCAATCAAACACACATTTCTTCATA
GTTTTTTCGGTTATCGATCTCAAACTAAGGATAACCAACGCGCCTGAGTC
AGGCCGATTAAGGACACTACCGTGCACTGCATGCATTTTACGACCGTCTA
TCCTCTGACTTGCTGGTCGTGCCTATTCCTTTTATTACTCCGGAGTACTT
GGAGTATTATTTTTGTACCTCCGCTTTTTAGATTTTAGATGAACGCAGCT
GCAGCTGCGTGGACCCAACACCATTTCTTAAATAGAAATCTAATTTCGAC
TTTAGATTTTAGATTTTAGATTTGGGCATTCCGCGGGGACAAAAGCCACC
CTGAACCCATCCGATATACGGAGTAATTTTTTTAAATTCCGGTACGTCGA
TGATGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGATT
CTCACATTAGCTCACTACCGCCTCAGTCAAGCCCGTGGTCACAAACCAGG
CACATATCGTGCTTGGAGGAAAAATAAAAAAATGAAATATATGGACCACA
TGATCACCTACAGTCAAATCAGATAGGGTACCGTTGGGGTACCATCTGTG
GTGGCCAAAGTACCAAACAAAATACAGAAAAAAAATCATGGGTTCGATAG
AAAAACAAAAATTGGAAACAGTGTGTGTTGTGTGTGTGTGTCAGTGTGTG
TTGTTGTCCCTTAAATTGGACGCCACTCTACACCTTTCGGGTAGGTGGTA
GGTGGACGCTCCAACTGGAGTCACACAGGGGGAAATCAGCACAGGAGTTT
TTATTTTTATTTTTCCAATTTCCTCTGCGGTGCTTGCCTTGTGTTTGGTT
GAGCTTTTATCGCTAGAAAGGGGACAGCGATCCCTTTCCCTCGTCGATGG
TACGATCGAATTTGTTTACTCACGAGTCAATCGCTTTCCACTTTCACGCG
CATTGTGAGAAGAAAACTCAGATCGTGTTACTGCGCTGGGATTCGAACTC
ACGCGTGAATGTCAGAAGGTTACGTGTTCACCAACTGAACCACCGGGGCG
ACCGGTTTACGTCAAACAAACAAAAACAAGACCAACCTCAACCATTACCA
TATACTTGTATGAACTATGTTTGTACGTAGACTTTAGCAACCGGCGATGA
CGACCTGCCTGCCTGCCTTGGCCTCATGATATCGCCGGCATTGGAAATGG
ACGATAATCGCCCGGTGTGTCATGCTTCCCGGGGGGCTTGCCACGGCTAC
GGCTCCCTTCAAAACTACTCCGCAAACCATGGATAGGCGGTTCTCTGTTT
CTTGAAAAAGGTGAACAGATAAAAAGTCGACTCGAACGCCGACAAGAGGA
AGCCATACGGGCGCTCCCCCAGATCGCGATGAAAACGAAGGCATGCATCG
CAAAAGGGACGTGGATAAAAGTACATCTTCCTCCTGTCTATGCGACCGCG
GCTGTAGCGCCCTCACCGCGAGTACACCGAAAGGTGGAGACTAGCGTCCA
GACTAGATGGGATTGCAACACTCGCACAGCGCGGTATCACAGCATACGTA
CCAGGTACTCCGTACGATATTGTATACTGCTGTCCTGTACTCCGCTTCGG
AGCACGTACGGGTATCATGCTGTATCATATGATACGATATTTACGTCAGA
CCGTTTCTTACGGCTCCGTTATTTGGTTCTGCGTTTTTTCTCCCGAGGTA
CCCCCCCCCCCCAATAACAGAGAGCCCAAATGGTTGAAAAAATCTACTAT
TGAGAGCACAATAGGCGACAGCACCAACCTGAACTCGACCCCTAGGACAC
AGATGCCGATTAAACCTGATGGATCGTGTTCTCAAGTAAGTTGGCCACAG
GAAGTTTGGTGGCAGTGAGTTCGGGCTGTGGCGAGATTTTGGCGGCGGTG
CGTGTTGGAGATGGAAAAACAGCCGAAACGAAACAGAGTTTTGCGAAATA
GAATATCTTATCTCACATATCCTTTCTTGGTTTCCCCGAGGTTCCCCCGA
GAGGCCCCGTGGCTGCACCGAAAAGAATATTTGATCTCAAATTCCGGAAA
TTCCCGGGAAGAATAGATATTTGAAAAGAATATTTGATCTGCCAAGCGAG
CCCGTGTCGGCACATTATGTGATTGGCCAAGTCACCCCGGCATCACCCGG
ATGGTGTGACGTGCGAGAAGATGGCGATACACCACTACGCTTCAGTCGAC
AGTACCGACCACTGCGCCGTGATTTCTAAAGGTAGTGAGCTCAAAGAGGG
TTCCGTGTAACCCTGTAGTCACTCTGCCAACATCTTTGCCGCTGGTTTAT
GTGGTGGAAGTGTGCCACCCATGCAAAACATATCGTCTGAGCAGCGACTC
TTTGAAAGTAGCAAGTGTGGCTGGTGTGCGTCCCCAGAGGCACACAGCAG
TTGAACGCGACAGACATCAGAACATCACAGCAGTCACGCTCTCGCTCTCT
ACACCACGTATCAAGGTGAAAACTTCTTGGCTGTCTCCTTTATATAGTGC
TCTCCGCCCGCAGGAGGTTGTGTTGGAGATGGGCTCTTCAATCGGTGGAG
AGACGCAGAAGCGTCGCCTGGGGTCTGGCCGGCCACGCCGGAAATGCAAG
CGACCTTTTTTTGCACATGGTAATAGACGGGCCAAAATGGAACAGCAGTT
GACACGCAGCAGTGATGCCTTCCTCCACAACACGGCCTCTCTGCCGAACT
TGCCCCATCCCTGCTGCCCATGACCCCTGACTTTGTATTTACTTCGCTTG
ACCCGGCACCCTTCACCACCACTTGAACGAAAGACTCATTGTGTTGTCTC
TACAGCAGCAGCACATCATCAGCCGTGTGTGTGTTTGTGCTTGTGTTGCT
CTGCACTCTCACAGCAAAGTGTAGACTAGGTGTTTTTGTCAGAAAGGATA
TTGTTTTTCGCAAACTCATTTTCGAATTTTCGTTACTGTAAAAAGAATTC
TCATTCACCGCGCTTTTTTTTTTTCGAGAAAGGATATTTGAGATAAGATG
TTCTATTTCGCAAACTCTCTAATACAAATAACGGTATTCGCTCCTGTTTT
CCCGGCCAAAAACAGGCTCGGCCAGCGTTTTTTTTTTACCGGATTTTCCT
ACCTCAACCTACTCCGCCGCCGTAACCTCGCCACAGCCAAAGCCCACACC
CACCAAATTTCCTGTGTCCAACCTGCGAACACTAGAGCGTACCATCCAAC
AGTTTTAGTCTCGATTGGTGTCCCAGGGGTCGAGTTCTGCTCGGTGCTGT
CTCCTGTTGTGCTCAAGAAGTAGATTTTTCAACCGTTTGGGCTCTCTTGT
TATTGGGGGGGGGGATACGTCAGGAGAAAAAACACAGAACCAAACAACGG
AGACGTAAGAAACGGTCTCACAAGCAGTAGGTTAATACTCCAGGAGTACG
AATATGTGTGTACATCAGTATCACCGTACTCAGAGAGGGAACTGGATATC
GTATCTGTGGAAAACCTGTACACTGCTGTAGGTACTTCCGCTGGGATGTC
ACCGTTTTTAAATCTCGTATGTACGATAGCCCGTTTCAGTGATGCACGGA
GCAACAACCTTTGTGTCTGCTCTCTGTACGAGTATTGATCCCAAATTTGA
GAGCGTGAACGAAGTGCTTGTTTTGCCTGCTACCGTGCATGGTCTGCATG
GGGCTTTTCTTTCCCCTTGCCGGCCTCAATCCGTTTCTTACGGTCCTCCG
AATTTTCGGCTTTGATTTCAGACCCCCTGCGCTAATCAAACTAGAGGACC
CCGCTACCCCCCCTTCCTCGAAACCTCCCTGTCGACCACAACAGTCAACA
GCACCAACCAGTACTCGGCTCCTGGGAGACTAATAGCAGTAAAACATGTT
GGAGCGTGCGCTCCAGTGCTCCGAGGTTGGACACAGCAATTTTGGTGGGT
GTTGGCTTTGGCTGACATTGGCGGCGGTGTGGGTTGAAGTAGGAAAATCC
GGCCAAAAAACATGCGAAGCAGGTCGAGTTCGTATGTTTTTTTGCCGGGT
TTTCCTACCTCAACCCGCACCGCAGCCAATGTCTCGCCACAGCCAACGCC
CACATACGCCAAACTTGCTGTGGCCAATCTCAAAACGCTGGAGCGCATGC
TCCAGCAGGTTTGATCGTGATTGATGTCCCAGGGGCCGATTACTGGCGGG
TGCTGTCTCCTGTTGCGCTCAGAGTAGCCTTTTCAGCCGTTTGGGCTCTC
TGAATTTCGGGGGGGGGTACCAAGCAAAAAAAAGACCCTCAAATACAGCA
TTTCCGTAAGAAACGGTTTCACTTTCTTGTTTGCGGGGGGGGAGGGGAGG
GGGGGGGGGGGGGGGCAAGGGGGTGGTTTTGTACAAGCTGAATACGACAG
CCAAAATATTTATGTTGCGCTCGCTTGGTCTGATTTTTCTCTTTTTCTCC
TGTTTTCGTCCACTTCACGGCACAATTCAACAGTTGTTGATTATCACATT
AGCTCACTACCGCCGCAGTCTAGCCCGTGGTCACAAACCAGGCACATATC
GTGCTAGGAGAAAAAAAAGAAAAAGAAAATAAATGGACTAATGTCACCCA
CAGTCAAATCAGATAGGGTATCGTCGGGGTACCATCTGTGGTGGCCAAAG
TACAAAACAAATACAGAAAAAAATACAGAAAATAACAGGTTCGAAAGAAA
AAACAGATATGGAAACAGTACAAAAAACAAGACAAACCTTAACCATATAC
TTCGAAGCACTTCGTATACCGAACCAGAGCCAGGGCCTCACAAACTAAGG
CAAAGGCAAAGCAGGGCGATGGTCCAGTAACTAGATGATCAACAGACGAA
AGACAAACAAATAAAAGAAGACACAGGGAGGGTACAAAGACTGAGGGAGT
GTACTCGTACACAAATACAAAAACAGGCCGCCAAACAAAGAGGAAGCAGG
GAAACGAAAGGGAAAATAAAGGAGACAAAGAGGAAAAATACACCGTGTGC
AGAGGAAAGACCGGAAGTCGGGGGGGGGGGGGCGGGGGTGATAAAAAATA
AAATAAAAGGCATGCAATCAGTCGCAAACATGTCTCGCTACGAGGTCTGC
CTGTTCACGCATGCTCTCCTCAGTCGCACTCATGCCTCCTGCTACTGGCA
CCACCGTACCCAGTTGTTTCTGCCCTACATCTTTGGCAGCAGCTACACCA
CCGCTCCGTGATTTCCGCCCAACAGGTTTTCCAGTCCGGCCACACCGCAG
CTTGGCTTTGGGCTGCTTCTTCTGCCGTGCAACTGTAACCCCGCTGCCCT
TGTGCCCCCCCGTACTCATCCTCTCGTGTATCCCCGCCATCCGTTCTCCC
TCTTGTGGCCAAGGCCGGCCTCTCAGCCGCGTTCCTCTCCCTTTTCCCTC
TCCGAAACTACCAAAACCAAACGCAACCAATCCAAACCTAAACCAAACCA
AACTAATCCAAACCAAACCATGCCAAACCCGACCCAACCGAATCGAACCG
AACCGAACCGAATCTCCTACTTGATTTCGTAACAGGCATGTCTCGCGTGG
GACGCCCTCGAGAAGGCGAGGCGCATGCACGGGGGTGGCCCGTGCAGCAT
CCCCTTCGTCGTGCGGACCAGGCGGCTGGATGCTGCTTACCTGCAAAACA
AGGTGCGCATCGTCGTTTCGTTCGTGTACGGCGTCGATCCTTTAGACTGT
GCTGCACCATGGCGCTTTTGTGTTGCAGTTCTACGGCAGGTGTGATACTG
CCGTACCCTCAAGTGTTCAAACAACGAAGATTATTTCCGTGCGAGAGTTT
GGTGGTGAAGCACGCACGCATGCACGTCCGATATCAAGCAAGAGCTACGC
CCAGCGATGCCGACCACCGGTATTAAAAAAAAAGACCAAATCCACCCGTG
AAATAACCCGCCCCCCTCTGCCAAAGTAGTTTGTATGGCTTGCTGTTCAT
TATACGTCGTGTATACGCCCCAAGCACGCGAATCACACGCGTTCGCCTGC
TGTGTGCTCGGGACAATGTTGTACTGAAGTGTCGCGCTGGTGTGCTTGTT
GTTTCCTGTGTGATCGTGTCTCGCGAGTGCTTTGTTACTTGAGCGAACCC
TTTCGCACTCACCCGGTTTGTGTATGCTTGTGCAGGCGCGCTTCCTGGAA
GAGTTCCTGAAGCAGTACCTCTTCGAAGCCAACAATAAGGAGGCGTTGCT
CTCGTTCGTGGACACCAGGAAGCCCGCCACCATGGAGCTCTAGTCAGGGT
TTGGTCTTGTGGGGGGGAGGGAGAAACCCAAAAAGGTTCTGATGGAGAAT
GACGGATGAAACCGAAAAATACCTTCACGACCGACCTTCATGGCGGTGAA
TGGAATGGCTCACGGCAAAAACGAAGGTACGAGTGAAACAGGGGGAAGGG
TGGGAAACGCGAGGGGGGTTGTCTGCCCCGCCACCTCTGCGTTGCCGTTG
CCGCTGCCGCTGCTGACCTATCTCGCACTCTCGACGACACACCGAGCGAG
AAGTGGTGTCATGATCGATTTGAGGCGAGGAAGGAACGCGGGCAAGAGAG
GGCGCGTGGTCGGGCTCGGGCTGTGCGACGCGTGCGGGGTTTCGTCGTGC
CGCACTGCTTGTGCCGTGGATGTGGAATTGGAATTGGAATCGGAATTGGA
ATTGGCACGGGGGTAAAAGTGGGGGGGTGTGTTGATTCGGGCGTGGAGTG
TGTGGGCCGGAGGCGGACATGGCCCTGGGGGTTGAGGAGGAGGAAGGCAA
GGCGGGAGAGCAAAGGTAGAGGGTGAGCGGTGCTGCGACAACACCAACGT
TCCACGGCGGTGGGGTGTTTCTACGACAGCCGCAACGGTACAGAGAGAGA
GAGAGAGAGAGAGAGAGAGACAGGTGGCTTTGCGGTACCAACACTCCCTT
TTCGGGACGGCGGCAGCGCAGACAGGAAAGGACGGGTCACATGAGCGGGC
CGTTCTTTGTATTTCCTCTCCGCCGCCGCCGCCGCCGGCCCTTCCAACAG
CGAATGAGAGTGTTTGGTTACTCGGCCCTTTATTTTCGGTTTTCGTATTT
CGTTTGTGTGGGTGGCGCACCGCCCCCACAACTTGTTGATGGTGGAGAGT
ATGGGCATGGCCGAGGGGGAGAGAAAACGTCGCGACAATACCGGTTAGGA
TTCCCCTGGTGGTTTGGCTAGGCTGGATAGGGAGGAGGGCGGGAACACGG
AAGGACGGAGAGGGTGTTCCACCCCTTGGAAGGCCAACGTTGACGGGGAT
GTCACGTGTGGCGCGATTTGTGGTGCGGTAGGTGAGTGGTGTGGTGTTGG
CCTCGGGAAGAAAAGCGGCCGAGGATGGGGCCGGGGGACGAGGAGTGAGA
GAATAGAGGGGGAATGCTGTGATTCATCGTCTTCATCATCAGTGTTTTTC
CGATGGATGATCCTGGCATATCGTCTCCTTTGGTAAACTACACAGCGGCT
GACCAATCCAGTAGAAAAGTGTAAATTAGCAGTGGTGACTTGAAGACGTG
GATTTCGCTCCCGAGTGCACAGATAGAGATTCGAGGGAGCACCCAAATTG
GACATAAAAGATTTGAAGCTTTTCAGGGCGTCCCACGCCCTGCCGCGCTA
CGTACGTTGGTTTGTTTGATCTTTTTAGCGTGCGCTCACTTGCTCACCCT
TATGCTTTGTGTATGAGTTTTCGTTGTTGGTGTTGTTTCCTCTTCTCCTC
AGGGATTCGTGTCCGCTTGATCGCGTCTACGCAGTCAGTCTGCAGGGAAC
CGTTTTTTCTCTCGTCCTTTAGTGCAGTATTTCATCTCCTTTGTTCGACC
GCGAGGAGAGGAAATTCTTTGATTTTGCGTGCCTGTCTGCCTGTCTTGTC
GTGCCGGCCTCGTTTTTCTTCTTGTGTTGTTTTTTGTCGGGTGAAGTGGG
CCGCGGTGTTGGTTGTCTCTCCGCGTATCGTAACTGCTATCAGTATATAT
TGTAGAATCGAGGTTTTCGAAGGGAAAAAAAATGGGCGCGTGATGGTGGG
TGTGGTCGGTGCAAAACGAGACCGGACTGCTGTGATCGATCGTGATTTGT
TTCCGTTGTACATATAACCGGTATGTATACGAAGTACGTTGTTGGAGATA
AAGAGAATGAAGGCTGACGGTGAGACGGGCCCAGCTCTTTGGTTGCTGCG
CGCGGCGGCAGGTTTATTTTATGAGCTGGTCGTTGATGACCCTTCCTTCC
TTCCCTCCTTCCTTCCTTCCTTAGCGGCCTTGTTTGCGGGGTCATGTATA
GGACGGCGCGATAGAAAGTGTGTCATAAAAACCCGTGTGGCCTCTCTGCC
ACACGTGAAGTTGTTTCCCGCTGCTTGATTGGATGGCGAAATGCGCGGAA
AGTCTGTGTAGTACATACATACAGTAGTAGAGAGATGTTCGAAAAAAACT
CCTGGAAAATTCCAAGCGTGACCTTGTAAAGCATTTTGATTTAAAGTGGT
GAGGTGGCGAAGCGTAGCATTTAGTTATGCGGAGAGTCCTGCCTCTCGTG
TGACCGTAGGCCTGCGTGCGTGCGGTCTTGTTCTTTTTTTTGGCGGAGTT
CCCATCTTGATTACTTATTTCGTGAGTTTTCATAGTTTAGTTCCATCATA
CGATTTGGTGGTGTTAGACGTAAGTACATTTTTAGTGAAAGTCAGGGTCG
CGTGCATTGCATCACGGGAAAACGTTATTTTCTCCATTCGTTCCGAAGTA
AGTGTTGGAGAATATGATATGCAGCGGAAGCAGCAAACACCGTCTGTCTG
GAGGCACTTCGTGAGAGGCGCGGCGCGTGCATGCCACGAGCCGAGGTCTT
GCCCTCCACTTCCTTCCGTCAGCTGAGCTGGTATTTCCTGTCTTTTTGTC
GACCTTTGTTAAAATCAGCTATATACACAATCTCAGGCAGACATCATAGA
AGTATCAGTAGCGTGAGCTACGAGACACGCCCGTTGAATGTCCTTTTTTT
TGTCACGCC

Coding sequence (CDS) from alignment at P-littoralis_Contig126:295073..309481+

>mRNA_P-littoralis_Contig126.71.1 ID=mRNA_P-littoralis_Contig126.71.1|Name=mRNA_P-littoralis_Contig126.71.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1593bp|location=Sequence derived from alignment at P-littoralis_Contig126:295073..309481+ (Pylaiella littoralis U1_48)
ATGGTACTCTCCCAGGAGGATTTCCCCCCGACGCTCGACAGGAAGGAGTG
GGAAGGAGATGTCGATTCCCGCGAGGAGGATATGACTGTGGTCGAGGGCT
ACGTGTTCGAGCACGCCTTGCTTTGGAAAAGTAAGTCGAACTCGGTTGGA
GGTTATCTCAATTTGGACGGCGGAAATCAACAGCAGGAAGTTCCCGCTGC
GCAGCATCCGCAGCTGCAGCAGCAGCAGAAGCCAGGGCCGCCGAGGGTGA
GCGTTACCCTTTCCGAGTACCTCTCAGCCGGCTCGCCCAATCCGGATCCC
TCGTGCGACTTCGGCTGGTTCACCCCCACGGCCTCCGTGAGCTCGCTCTT
GTCAGCGGGAGACGTCGCTACAACTTCGTATATGCTAGAAGATCAGGAGC
CCGTTTACCGTGCCCCCAGCCCTGCCCATCATCCTACAAACTTCCTTTTC
GCGCGCAACACCAGCTCAGCGTCTGCCGCGAAGACGGTTACCCTCTCGCC
TGAGTCCGTGCTTGGTTGCGGCGGGGGTGATGGAGGGGGGGGCAACAAAA
GCAACCGGCGAGTTTCGTACACAACAACAGCTTCAGAGGGAGAATGCTGT
AACGGCAGCATCCCCACCCAGGAATCTGCCTCTTTGTCCCAGAAACAGCG
GTCACTGCAGCTTGTTCTATCAGCAGACGCGAGCAACGGCAATTCCAGAG
GCAACGGCAGTTACAGGAGAGGAAGCACTGGTTGTGGCGGGGCAGGGGTG
AGAGGTAGCGCGGTGGATGATGGCGTGCCCGATGGTCGCAGCAACACCAC
CATGGGCGTACGCTTACTTCCAGTCGCGTGCAGCAGGAGCACGACGACGC
ACCTGAATTCCTGGCACACGCTGTACTCAGAGGCGTCGGAATCGGGAAAC
CTCTCGTCTCATGGAAAAGCGACTTTGCATCTCAAGAGGGCAGGCTACCT
CATCTCTACCAGGCATTTCCCGGAGAAGTCACCCATGCCTCTTGCGCCGC
GATCAACGGGAGAGGCTGCTGGCATTAGCGCCAGCGGCGGCGGGGGCGGG
GTTGGGGGCCCGGTAGGCCGGCGTCGAAGCGCAACACCATTCAGCTGTTC
TTCTGCGGTTCAACACGCGCAAGAGATGCACAGAGCTCGTCTGCGGCGGC
AGGAACAGCAGCAGCAGCAGCAGCCCAGAATCAAACCGAAGAGTTACAGC
TGGTCCATCACGGAGATTCGGGTGAGACAGGGGCAGCCCTTCCAGCCCCC
GTTCGCTCAGTACCTCGTAGTGGTTTGCGTGGGGCGAGAGAAGCTGGTGG
CCGGGTGGAGGCGGACCTCGGAGTTCGAGAAGCTTGCTCAGGTCGCCCGC
GCGGTGAAGATGTCAAAGGCATGTCTCGCGTGGGACGCCCTCGAGAAGGC
GAGGCGCATGCACGGGGGTGGCCCGTGCAGCATCCCCTTCGTCGTGCGGA
CCAGGCGGCTGGATGCTGCTTACCTGCAAAACAAGGCGCGCTTCCTGGAA
GAGTTCCTGAAGCAGTACCTCTTCGAAGCCAACAATAAGGAGGCGTTGCT
CTCGTTCGTGGACACCAGGAAGCCCGCCACCATGGAGCTCTAG