mRNA_P-littoralis_Contig124.69.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig124.69.2 vs. uniprot
Match: D7FWC6_ECTSI (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWC6_ECTSI) HSP 1 Score: 1303 bits (3372), Expect = 0.000e+0 Identity = 931/1972 (47.21%), Postives = 1100/1972 (55.78%), Query Frame = 3
Query: 369 MCENGAIMARAYVAEQCPRDVARKQSTMCDASLGNEHDAGVGVGGSGNSELGELTRNPSVEESAENAARELEGTHKKILAESMIVFHDKRSSSRHLATRTMVRIFGRLAVVQGLDDIQAVVEKLHVPHSSRNGVAAIITDLDPKVPKLMEFLRLRSLRPGLGKLPIVAVIVVIDPDEPRQVVPDVLTSATESGVDAVMRRPLDSSILTSCVGEVLRRHASVEFVYKDVVGEVETFNYPRFLLEGFHFLGVAENSV--GGIGDADGGFNEVVGEAVRTYTLQAS-GTGDGSVSTIGSGGLGQEGALPCNRGSTAGYVSR--------RQGASLSATSPSSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGGSVESLATKMMGKARVVSILQGGHVKISSPSLRPRLYLYPGDKGYIGGGSTTSXXXXXXXXXXXXXXXXXXXINSKGIGRKTSRGVDDGKEA---------------------VDRLKESERQARQ---------VSHELAPFVKRRAPTLGTRSTSSGLHKASLATTMRLVENTFSFTKGQDAATASAWKSKGRTVAPPVRGSPAAAAXXXXXXXXXXXXXTXXXXXXXXXXXXXXXXXXXGRVHFKHQNGSSSPPGAKGGSWKSAPVRIARPESGNPVSQKNVFGASGTQGRRAATSSGIFGEVCRSQQTNTNPTAIASTANLRSALGVGVTGEAAAKVVISRMIRNRKARMLKNNQVALASRGSEKIRMEAATGSSCRRG---RRAHRKGXXXXXN--------SRRGDAGK-KRAP----QTAEGHGRSGTSLGEGIFKTVLSSMAKKRLRTGLQEIKTNPTDVLRCGLVEVEPARYGSTALGCHLIKGWAEQKGGNKRRALGHYRRAVASEPDNVEALFCKAVVSAQLMELFDALKDFSAAISFKLNEVRTN--QQLGLDKIRASGNALSGXXXXXXXXXXXXXXTSRGAVTSGTVGAEGAFGESNVRLSHLYSNRALVYVCLGDDASALDDLDRAVAKDTRNIAYRSXXXXXXXXXXXXXXXXXXXXRIGALQT-QFTVLHRSTSLLLMFR--NHRYQNGPIEITTLYATLLWNRAFRADCLERIASFTLLQTLERAAADRNAASTPKTPSSAQMSAKKSQRLARQTSPNHHHESSPKLGTFPADNGKSDILFPIADRTNRHLPGAGATMTSGGGASILGGHGSVVKVGGVIAASAATAGGSVEVDKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSGINGTSDSSSGNPSSAKDQKIDVKSSEEWSDQFRDRRLMEDTFRRKALLRQLLLSPEDADGDEGIEYPEDETGRNWSGKRSGGGGGFGRECGKGASLGEFKASVGLSAKGELFDDLFCRPSCVDEALTTEPGRRTPEQVIHVVKALSICPAFDGLSKETLTEIGNVVEYRVLEKMAPAFLQGEEMDAMVVVLSGRVAVKLRRADLSVVTADELGPGDTFGEAYMVDEHRTSALRRQNSVYEEGSXXXXXXXXXXXXXXGKEHRPPLDCSSASPRGAASPAPGQGEEDQPQRLEAIDEGRRSVPAAPGQLGPGPGSGRGGSGGAVEGAASPGTGKSMETYQTLEPTRLLLVLKDDFYRIRGLLKHCIHAFKRRQEAIKLCGLFGGWDHEDLMRLTRMSRVHRHTSKSILLMQRKEPSHLHIVLSGTCTVTKYPDRLAAVQRKVNEIGAALYRIKSKYAYHRDVRAQVARGANNKARGGASPPVPKNNKLFNGNGNGVGRDDDRTATGGTAGGKQMRLPRTLIAECSAPLPHVTSTEVRQAELEREIRRWKRTLALIRRKDGDVVDTSQTQNVGTLQFPHFFGEVCLLVPDGGEALGTVSTDTMVETVSISKFVLQTFHVTDTFLQGVRQKSSIYPEDINLAKEIEADRWWKVRRRELVLEALIGPAA-GCGGGGWKHKNQWLIRERPKR---PATA 6086
MCEN I C ++ R +S++CDA L NE VG L + E+S+EN A HK++LAES+IVFHDKRSSSR LAT+ MVR+ GRLAVVQG DDI AVVEKLHVPH+SR+GV AIITDLDPK+PKLME LRLRSLRPGLGKLPIV+VIVV+DPD+ R P++L SA ESGVDAV+RRPL+ S TSCVGEVLR+HASVEFVYKDVVGEVETFNYPRFLLEGFHFLGV E GG+G+ D FNE+ G+AVRTYT +AS G+G+GSV+T+G+GG Q+G + N G AG AS +AT + S ++ +MMGK +V++ ++GGHVKI+SPSLRPRLYLY GDKGY+GGG +T +S+ G+++S G +G VDR ESERQA Q S L P V PT G+ +TS+G H + A S + Q A G + PP R P R G++ P A+G SW++A VR RP+ GNPVSQK +F A+GTQGRRAAT +G+F EV R QTN NPT +AST NLRSALGV VTGEAAA++VI RMI+NRKARM K A+++ G + R A C G +RA R G + R G AG KR P T+ G G SG LGEGIFKTVLSSMAKKRLR GLQEIK+NP D+LR G VEVEP ++GSTALGCHLIKGW EQ GNK RALGH+RRAVASEP+NVEALFCKAV+SAQLMELFDALKDFSAAISFKL+E QQ G + N ++ XXXXXXXXX + SNV L+HLY NRALV+VCLGDD SALDDLDRAVA+DTRNI YRS RI ALQ + T RS + + R ++GP ++ N + T AA A P+ A R + H + G +G + + R LP AGA T+ +VV GV TAG V + GT+ ++A D T A + G P+ GR+ GASL EFKAS+GLSAKGELFDDLFCRPS +DEALTTEPGRRTPEQV+HVV+AL+ CPAFDGL KE + EIGN VEYRVL+KM+ AFLQGEE+DAMVV+LSGRVAVKLRRAD SVVTADELGPGDTFGEA M+DEHR +A RR+NS E + G P S SPR G E QP+ E + EG PG+ G G G R GSG +SPGTG+SMETYQTLEPTRL+L+LK DFYR+ GLLKHC HAFKRR +AIKLCGLFGGW+HEDLMRLTRMSR+HRH SKS+LLMQRKEPSHLHIVLSG CTVTKYPDRL+AVQRK+NEIGAALYRIKSKY+YHRDVR +V + P+ R A+ S + +E + +E+ T++VG LQ+P FFGEVCLLVPDGGEALGTVS DT+VETVS+SKFVLQTFHVTDTFLQGVRQK+SIYPEDINLAK IE D+WW+VRRRELVLE LIGPAA GGGGWKHKNQ L+R+RPKR P+TA
Sbjct: 1 MCENDTITEGR--RGTCLTELTRHKSSVCDAGLDNE----VGAAAVAPDPQRGLAAKCAREDSSENTA-----AHKRLLAESLIVFHDKRSSSRQLATQIMVRLVGRLAVVQGADDIIAVVEKLHVPHASRSGVNAIITDLDPKIPKLMESLRLRSLRPGLGKLPIVSVIVVVDPDDLR---PELLASAIESGVDAVIRRPLERSSFTSCVGEVLRKHASVEFVYKDVVGEVETFNYPRFLLEGFHFLGVGETGSVGGGVGEGDSTFNEIAGDAVRTYTKEASTGSGNGSVTTVGTGGWAQDGIVSPN-GGNAGQSEAPLPTPXXXXXXASTTATDATGFGSAARK-------------------------------SSRQAATARMMGKTKVLTTMRGGHVKITSPSLRPRLYLYTGDKGYVGGGGSTMNANT----------------DSRDGGKRSSAGCSNGGVGGSXXXXXXXGDRDRQNQGGTEVDRRVESERQAWQSKGRTAAAGTSSSLRPSV----PTPGSFTTSAG-HAPTAAG-----HGAGSGLRAQRNARIGPGFPPGVGIIPPGRALP------------------------------------QNRTRPPKTTGTAVGPAAEG-SWRAATVRAPRPDEGNPVSQKKIFNATGTQGRRAATRAGMFDEVLRRDQTNANPTEMASTGNLRSALGVVVTGEAAARLVIGRMIQNRKARMAKT---AMSNGGEDGSRGAGA----CAYGPISKRAPRGGLTGGRSMAAGRDRGGRGGSAGALKRKPVKGVSTSAG-GVSGGLLGEGIFKTVLSSMAKKRLREGLQEIKSNPLDLLRRGFVEVEPTKHGSTALGCHLIKGWEEQTNGNKSRALGHFRRAVASEPENVEALFCKAVLSAQLMELFDALKDFSAAISFKLDETHRAALQQRGASNTKRPSNGVTASGSAGXXXXXXXXXXXXXXXXXXXXXXK-----SNVSLAHLYGNRALVHVCLGDDDSALDDLDRAVARDTRNITYRSNRALILRRVGDFRGAQQDYSRIRALQILEQTAADRSATQETISRPATPAVKDGPHT-----GSIALNGS---------------PTTAGAAGAAEATGAPEEKGGA----------TRPWAVKSHGKGISSGGGGLVPDGSAAV-----HARARSLPSAGARTTT-----------AVVAEPGVGTVEKPTAGHREHVQRCASSPLLERTSHGNVGVGAVIPTPGKSLLLEENKTPASPGHGGRSIEEHKGTAQDGGSAAAAA------------------DGPATSSTRTGTATMTT------------GYSLPK------------------GRQ---GASLVEFKASMGLSAKGELFDDLFCRPSFLDEALTTEPGRRTPEQVVHVVEALAACPAFDGLEKEVMIEIGNAVEYRVLDKMSAAFLQGEEIDAMVVILSGRVAVKLRRADFSVVTADELGPGDTFGEACMLDEHRITAQRRRNSNCNENACEGAQGSGGADKPPGSPTSPREVNDSESPRVVVPKDKGTPEY-QPE--EPLTEGA----GLPGRGGTG-GRARVGSGS----GSSPGTGRSMETYQTLEPTRLVLILKRDFYRMPGLLKHCAHAFKRRLDAIKLCGLFGGWEHEDLMRLTRMSRIHRHPSKSVLLMQRKEPSHLHIVLSGACTVTKYPDRLSAVQRKINEIGAALYRIKSKYSYHRDVRTKVV----------LADPI-----------------------------------RARYAKRSLSERYAVGSEPWLSFVEKT-----------------------TRSVGNLQYPQFFGEVCLLVPDGGEALGTVSADTLVETVSMSKFVLQTFHVTDTFLQGVRQKASIYPEDINLAKAIEVDKWWEVRRRELVLETLIGPAATASGGGGWKHKNQALVRKRPKRSKRPSTA 1673
BLAST of mRNA_P-littoralis_Contig124.69.2 vs. uniprot
Match: A0A6H5K1M1_9PHAE (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1M1_9PHAE) HSP 1 Score: 796 bits (2055), Expect = 1.330e-254 Identity = 648/1459 (44.41%), Postives = 768/1459 (52.64%), Query Frame = 3
Query: 1503 KARVVSILQGGHVKISSPSLRPRLYLYPGDKGYIGGGSTTSXXXXXXXXXXXXXXXXXXXINSKGIG-------------RKTSRGVDDGKEAVDRLKESERQA-----RQVSHELAPFVKRRAPTLGTRSTSSGLHKASLATTMRLVENTFSFTKGQDAATASAWKSKGRTVAPPVRGSPAAAAXXXXXXXXXXXXXTXXXXXXXXXXXXXXXXXXXGRVHFKHQNGSSSPPGAKGGSWKSAPVRIARPESGNPVSQKNVFGASGTQGRRAATSSGIFGEVCRSQQTNTNPTAIASTANLRSALGVGVTGEAAAKVVISRMIRNRKARMLKNNQVALASRGSEKIRMEAATGSSC---------RRGRRAHRKGXXXXXNSRRGDAGKKRAPQTAEG-----HGRSGTSLGEGIFKTVLSSMAKKRLRTGLQEIKTNPTDVLRCGLVEVEPARYGSTALGCHLIKGWAEQKGGNKRRALGHYRRAVASEPDNVEALFCKAVVSAQLMELFDALKDFSAAISFKLNEVR---------TNQQLGLDKIRASGNALSGXXXXXXXXXXXXXXTSRGAVTSGTVGAE-------GAFGESNVRLSHLYSNRALVYVCLGDDASALDDLDRAVAKDTRNIAYRSXXXXXXXXXXXXXXXXXXXXRIGALQTQFTVLHRSTSLLLMFRNHRYQNGPIEITTLYATLLWN-----------------------------RAFRADCLERIASFTLLQTLERAAADRNAASTPKTP--SSAQMSAKKSQRLARQTSPNHHHE-----SSPKLG-TFPADNGKSDIL------FPIADRTNRHLPGAGATMTSGGGASILGGHGSVVKVGGVIAASA--------------ATAGGSVEVDKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSGINGTSDSSSGNPSSAKDQKIDVK----SSEEWSDQFRDRRLMEDTFRRKALLRQLLLSPEDADGDEGIEYP-EDETGRNWSGKRSGGG-GGFGRECGKGASLGEFKASVGLSAKGELFDDLFCRPSCVDEALTTEPGRRTPEQVIHVVKALSICPAFDGLSKETLTEIGNVVEYRVLEKMAPAFLQGEEMDAMVVVLSGRVAVKLRRADLSVVTADELGPGDTFGEAYMVDEHRTSALRRQNSVYEEGSXXXXXXXXXXXXXXGKEHRPPLDCSSASPRGAASPAPGQGEE---DQPQRLEAIDEGRRSVPAAPGQLGPGPGSGRGGSGGAVEGAASPGTGKSMETYQTLEPTRLLLVLKDDFYRIRGLLKHCIHAFKRRQEAIKLCGLFGGWDHEDLMRLTRMSRVHRHTSKSILLMQRK------------------------------------------EPSHLHIVLSGTCTVTKYPDRLAAVQRKVNEIGAALYRIKSKYAYHRDVRAQV 5411
+ +V++ ++GGHVKI+SPSLRPRLYLYPGDKGY+GGG + ++ G+G R+ G + +DR ESERQA R+V+ + + + PT G+ +T +G H S T AP AA XXXXXXXX R G+++ P A+G SWK+A VR RP+ GNP+ QK +F A+GTQGRRAAT +G+F EV RS QTN NPT A+T NLRSALGV VTGEAAA+ VI RMIRNRKA+M K S+G E G+ R G+ R RG + + A+G G SG LGEGIFKTVLSSMAKKRLR GL EIK+NP D+LR G EVEPA++GSTALGCHLIKGW EQK GNK RALGH+RRAVASEP+NVEALFCKAV+SAQLMELFDALKDFSAAISFKL+E +N + + + ASGNA G T G G E G GESNV L+HLY NRALV+VCLGDD SALDDLDRAVA+DTRNI I Q T+ ST + G I + T RA ++ +S L + AA A S P T S+ + A+ +A + HH SSP L TF + G ++ + + PG G + H + GG +AA+A TAG S+ + XXXXXXXXXXXXXXXXXXXXX + T+ A D+ ID SSE WSD FRD+RLMED FRR+ALLR+L LSP D YP ED G S KR+ GG + GKGASLGEFKAS+GLSAKGELFDDLFCRPS +DEALTTEPGRRTPEQV+HVV+AL+ CPAFDGL+KE + EIGN VEYR+L+KM+ FLQGEE DAMVV+LSGR AD SVVTADELGPGD FGEA M+DEHR +A RR+NS E + G + P SS +ASP E+ Q Q E + EG PG+ G G + R SG G+SMETYQTLEPTRL+L+LK DFYRI GLLKHC HAFKRR +AIKLCGLFGGW+HEDLMRLTRMSR+HRH SKS+LLMQRK EPSHLHIVLSG CTVTKYPDRL+AVQRK+NEIGAALYRIKSKY YHRDVR +V
Sbjct: 4 QTKVLTTMRGGHVKITSPSLRPRLYLYPGDKGYVGGGGSAMNANTDSHDRGERSSTGC---SNGGVGGSXXXXXXXGDRDRRNQSGTE-----LDRRVESERQAWQSKGRRVAADTSSLFRPSIPTPGSFTTPAG-HGPS-------------------------------TTAPS-----AAGXXXXXXXXXRRNARIDLGFPPGVGVTPPGGVIRRNRTRPPKTTGTAAGPAAEG-SWKAATVRAPRPDEGNPMCQKKIFNATGTQGRRAATRAGMFDEVLRSDQTNVNPTETATTGNLRSALGVVVTGEAAARAVIGRMIRNRKAKMAKTAM----SKGGEDCSSGVTVGACAHGPISKGADRGGKTGGRSKVACGDREGRGGSAGVLKNKPAKGVSISAGGVSGGLLGEGIFKTVLSSMAKKRLREGLHEIKSNPLDLLRRGFAEVEPAKHGSTALGCHLIKGWEEQKNGNKSRALGHFRRAVASEPENVEALFCKAVLSAQLMELFDALKDFSAAISFKLDETHRAALRQSGASNTKRPSNWVTASGNAA-------------------GVYTHGRDGGEARTGQGGGTSGESNVSLAHLYGNRALVHVCLGDDDSALDDLDRAVARDTRNITGAQQDYSRIRALQMLEQTATDRNAI-----QETISRPSTPAV----KDGPHTGSIALNGSPTTAAXXXXXXXXXXXXXXXXGATGAPEEKGGARRPRAVKSHGKGISSSGGGLVSDGPAAMHARAKSLPSTGARSTTVVVAEPGVGMAEKPPAGHHEHVRRCTSSPLLEKTFLGEVGVGSVIPAPGKSLLLEENKTPASPGHGQRVME---------HEGTAQDGGSVAAAADGPATFITRTGAATRTAGYSLPKGRQGDTHTGCGNDRATDSNDIPAPPAXXXXXXXXXXXXXXXXXXXXXXTMTTRTT---------AGDKSIDAGLSSCSSEHWSDLFRDKRLMEDNFRRRALLRELHLSPTDGGEGRRNRYPDEDGRGGAESEKRNSGGCDRLRKTTGKGASLGEFKASMGLSAKGELFDDLFCRPSFLDEALTTEPGRRTPEQVVHVVEALAACPAFDGLAKEVMIEIGNAVEYRLLDKMSAVFLQGEETDAMVVILSGR-------ADFSVVTADELGPGDVFGEACMLDEHRITAQRRRNSHCHENACEGAQGSR------GADEPPGFFTSSREVNESASPRVAVPEDKGTQQHQPEEPLTEGA----GFPGREGAGCRA-RITSGSXXXXXXXXXXGRSMETYQTLEPTRLVLILKRDFYRIPGLLKHCAHAFKRRLDAIKLCGLFGGWEHEDLMRLTRMSRIHRHPSKSVLLMQRKILSQSPVYRQTLLSLLPLLRLKWMPLYVHAVPPVGPHFDAKKEPSHLHIVLSGACTVTKYPDRLSAVQRKINEIGAALYRIKSKYTYHRDVRTKV 1348
BLAST of mRNA_P-littoralis_Contig124.69.2 vs. uniprot
Match: A0A7S3XP60_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XP60_HETAK) HSP 1 Score: 152 bits (384), Expect = 1.510e-35 Identity = 104/320 (32.50%), Postives = 154/320 (48.12%), Query Frame = 3
Query: 5025 TYQTLEPTRLLLVLKDDFYRIRGLLKHCIHAFKRRQEAIKLCGLFGGWDHEDLMRLTRMSRVHRHTSKSILLMQRKEPSHLHIVLSGTCTVTKYPDRLAAVQRKVNEIGAALYRIKSKYAYHRDVRAQVARGANNKARGGASPPVPKNNKLFNGNGNGVGRDDDRTATGGTAGGKQMRLPRTLIAECSAPLPHVTSTEVRQAELEREIRRWKRTLALIRRKDGDVVDTSQTQNVGTLQFPHFFGEVCLLVPDGGEALGTVSTDTMVETVSISKFVLQTFHVTDTFLQGVRQKSSIYPEDINLAKEIEADRWWKVRRRELV 5984
+Y +P LLL+L++DF R+ L H K++ + +K G+F GW DL+RL M+++ + ++ Q +P L + G C V KYPDR A V+RKV E+ L+R+ KY YH +R G G D I E H T +E ++ ELE EI+ W+ LA I+++ G T + V TL P FGE+ L P G ALG+V +DT+VET+ + K VLQTF ++D L +R+K + P+D+ LA EAD W +R+ +V
Sbjct: 110 SYYVEQPVELLLLLREDFDRL--LRDHSHARMKKKYQDLKHSGVFAGWPTGDLLRLASMAQIKVFPRNTTIVQQAVQPQSLFFLTKGVCRVMKYPDREAQVRRKVEELNKELHRLNIKYTYHHTLR-------------------------------GKGVD-------------------AYINEWGPN--HNTLSEQKKIELEAEIKFWEDQLAGIKKRPGTADKTKDGRQVATLLPPAIFGEMAALDPHKGVALGSVVSDTLVETLRVHKIVLQTFDISDEVLARLRRKGARCPDDLALAARAEADDAWAKKRQRVV 375 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig124.69.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig124.69.2 >prot_P-littoralis_Contig124.69.2 ID=prot_P-littoralis_Contig124.69.2|Name=mRNA_P-littoralis_Contig124.69.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1908bp MCENGAIMARAYVAEQCPRDVARKQSTMCDASLGNEHDAGVGVGGSGNSEback to top mRNA from alignment at P-littoralis_Contig124:398543..427057- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig124.69.2 ID=mRNA_P-littoralis_Contig124.69.2|Name=mRNA_P-littoralis_Contig124.69.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=28515bp|location=Sequence derived from alignment at P-littoralis_Contig124:398543..427057- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig124:398543..427057- >mRNA_P-littoralis_Contig124.69.2 ID=mRNA_P-littoralis_Contig124.69.2|Name=mRNA_P-littoralis_Contig124.69.2|organism=Pylaiella littoralis U1_48|type=CDS|length=5724bp|location=Sequence derived from alignment at P-littoralis_Contig124:398543..427057- (Pylaiella littoralis U1_48)back to top |