mRNA_P-littoralis_Contig123.48.10 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig123.48.10 vs. uniprot
Match: D7FJ19_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ19_ECTSI) HSP 1 Score: 849 bits (2193), Expect = 1.270e-284 Identity = 596/1184 (50.34%), Postives = 739/1184 (62.42%), Query Frame = 3
Query: 333 TKENAELRRHVKRRTQALDTIRRAYILDVDRLKRGLQDQQVEGKSAAAEPEDLDEATLERIPSLDFRPVLKLFAPTGGKLQISPCGECGGTMEIIHYDENKLVKLGRQIDTLREALVESGEKLGYSDALAETYRLKTETSSSEFSELNNMLLREMKVLKEKLGDAGPEVVARMSGEREKVESRLRSANRTVLELESAVAELQGKLRQSEEDSIKVAEMEYHLLEVSKDRKAMAVERDTHASTVDELRATVVSLNEHLRKAADKHAKLQKAFQDHEENNHHSIEELRRLLDSSKTNEAALRGELAELREENLQLYLS----DGNDSGDESTDEVRFRKISTGFLAASDGEPEVVEAPPEKSDGLLVLELTEGLRRKSTVALGEDILSGAYARREEKTALEKAELQALVHKAEAQARHCEQENRKLLKMWNLSRRRLLEVERANFSGEGGTFS----------HNTADPRKDKKGDEAEKCATSGRSRKRARRSTRKGAPLIQADKEQGGDAPSVSPAQPMAAPTSLSDKVVGTLLTSSVPRAASEKDDAETASSSDDGDAHDVMAVAMSYLEEDCRWLRIEKEELQGHCTNLKNQTQDFGERLERTQISFDKEKEGKEEAERELEERRELLSKATLAVAEHTMALHDAVEGTEKVKAELESEKQNTANFRQKIKEARIMGALNSGLEEGLAATKNALELMTVANSQAEAMAERNASQAXXXXXXXXXXXXXXXXEGMRAEEAVSRHFLFNVAVAEKIATLGLELEKRDCELKRRRQEAKEHAEQMKEFRQVVAEKVKLKDEANLHIQTNLNLQQRIAMDEVIIEELKLQVVLLDEMRKEVLRLEGIVDRLQKELVDTKASLKALKKQHEAVEQQLREKLSLNRKLWAALAGAIFLVDDWCAGPLLAWRETDTSATPTILPKPPFEARAVEEIMKLRRAGPGVADAHTTYSTTASASLSEDAAGVAVSIEDRLEGQQPNKIKAWLGFRVQVVAAMQHNNLIDSARSEKLLLDTICKQRAAQTLNLEEALRRLEATRAALQKEYDDILVVKEELSKIVLKQNGILLDNSQELRKYAMLKVDHQVEIRRHERATKCLHEAESSIRGLDSQLERARKFADLAESTAKDAECARGAAVKEREAAINEVHVIREAMERRKEQAEIVQQKLDDLVQADATRLATNKTVATEV 3842
TKENAELRRHVKRRTQALDTIRRAYI+DV+ LKR L+DQ VEGKSAA E+ D+ L IPSLDFRPVL+LFAPTG LQISPC ECGGTMEI+HYDE ++VKL RQ++T+RE L+ESG+ LG S A+ ETYR K ET+SSEFSE++NMLLRE+K+LKEKL +AGPEVVA++S ER+K ESR+RSANRTV +LES V ELQ ++++ +D++KV EME+HLLE SK+ KAMA ERDT AS DELRATV SLN L++A DK+AKL KAF+DHEEN+ SI +LR+LLDS+KT+EA +R ELA LREENLQ L+ DGN E D + + G A +GEPEV PPEKSD +LVLELTEGLRRKST A+GE+ILSGAYARREE+ ALE A+L+AL+ KA+AQ +++N+KLLKMWN +R RL E E + SG+ S A P +E ++ A + RS KRARRSTRK A A+T SSD+ D VMAVA+SYLEEDCR L + K ELQ +C N LLSKATLAVAEH+MALHDA E T+KVK EL+ EK TA ++KE MG +N LE GL ATK++LE+MT A +AEA AERNASQAXXXXXXXXXXXXXXXX SR FL +V AE+IA LG+EL K EL+RRR EAKEHAEQMKEFRQVVAE+ +L++E T L+++QR A D+ +IEELKLQVVLLD MRKEVL LE ++RLQ EL TK SL+A Q K++ +A ++H++ +D ARS++LLLD++CKQRAAQ N+EEA+RRLEATRAALQKE+D++LV KEEL + +LKQ +LLDNS+ELRKY+ LKV+H E+++H + +CL EAE +IR ++ +LERA A +A STAK+AE R +AV+ER+AA+ E IR+ MER KEQA+ V ++L DLV+A+ TRLATN VATEV
Sbjct: 9 TKENAELRRHVKRRTQALDTIRRAYIVDVEHLKRDLRDQ-VEGKSAAGS-ENSDDVALGGIPSLDFRPVLELFAPTGDTLQISPCEECGGTMEIVHYDEKEVVKLRRQLETIREELMESGKALGNSKAIVETYRAKAETASSEFSEIHNMLLREIKMLKEKLANAGPEVVAKISEERDKAESRVRSANRTVSDLESVVVELQAQVQRDADDNLKVEEMEHHLLEASKETKAMAFERDTQASAADELRATVASLNTDLQQANDKNAKLLKAFEDHEENSKRSIAKLRKLLDSAKTSEAEMREELAALREENLQNMLTSEGGDGNSRSHEHLDRPQDAASADGSFAGFNGEPEVEAPPPEKSDKMLVLELTEGLRRKSTAAVGEEILSGAYARREEQAALEIAQLKALLTKADAQVLKGKRDNKKLLKMWNGARARLQEAEGTDRSGDSSNLSLPITVSKVPTEEHAPP------EEVKESAANLRSGKRARRSTRKVA--------------------------------------------------ADTVDSSDEDDTEGVMAVAISYLEEDCRRLGVAKGELQEYCNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLSKATLAVAEHSMALHDAQESTDKVKQELDQEKTATAQLGLQLKE---MGTVNGVLEAGLVATKHSLEIMTTAKGEAEAAAERNASQAXXXXXXXXXXXXXXXXXXXXXXXESSRRFLSDVVAAERIAVLGVELNKCVNELERRRLEAKEHAEQMKEFRQVVAERARLEEEVASQRDTILDMRQRTAKDQTMIEELKLQVVLLDGMRKEVLCLEDKLERLQVELSATKTSLEA--------------------------------------------------------------------------------------------------------------SNQQRKVQ---------IATVEHHDRVDGARSDQLLLDSLCKQRAAQISNMEEAMRRLEATRAALQKEHDELLVEKEELHETLLKQKDVLLDNSKELRKYSALKVEHATEVKQHGKVARCLQEAEGNIRRVNIRLERAIGDAAVAASTAKEAESVRASAVEERKAAVVEAQTIRDTMEREKEQAQAVGKQLHDLVEANVTRLATNTAVATEV 1012
BLAST of mRNA_P-littoralis_Contig123.48.10 vs. uniprot
Match: A0A6H5KG14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG14_9PHAE) HSP 1 Score: 738 bits (1905), Expect = 1.680e-241 Identity = 530/1107 (47.88%), Postives = 672/1107 (60.70%), Query Frame = 3
Query: 606 MEIIHYDENKLVKLGRQIDTLREALVESGEKLGYSDALAETYRLKTETSSSEFSELNNMLLREMKVLKEKLGDAGPEVVARMSGEREKVESRLRSANRTVLELESAVAELQGKLRQSEEDSIKVAEMEYHLLEVSKDRKAMAVERDTHASTVDELRATVVSLNEHLRKAADKHAKLQKAFQDHEENNHHSIEELRRLLDSSKTNEAALRGELAELREENLQLYLSDGNDSGDESTDEVRFRKISTGFLAASDGEPEVVEAPPEKSDGLLVLELTEGLRRKSTVALGEDILSGAYARREEKTA--------------LEKAELQALVHKAEAQARHC---------EQENRKLLKMWNLSRRRLLEVERANFSGEGGTFS----------HNTADPRKDKKGDEAEKCATSGRSRKRARRSTRKGAPLIQADKEQGGDAPSVSPAQPMAAPTSLSDKVVGTLLTSSVPRAASEKDDAETASSSDDGDAHDVMAVAMSYLEEDCRWLRIEKEELQGHCTNLKNQTQDFGERLERTQISFDKEKEGKEEAERELEERRELLSKATLAVAEHTMALHDAVEGTEKVKAELESEKQNTANFRQKIKEARIMGALNSGLEEGLAATKNALELMTVANSQAEAMAERNASQAXXXXXXXXXXXXXXXXEGMRAEEAVSRHFLFNVAVAEK------------------------IATLGLELEKRDCELKRRRQEAKEHAEQMKEFRQVVAEKVKLKDEANLHIQTNLNLQQRIAMDEVIIEELKLQVVLLDEMRKEVLRLEGIVDRLQKELVDTKASLKALKKQHEAVEQQLREKLSLNRKLWAALAGAIFLVDDWCAGPLLAWRETDTSATPTILPKPPFEARAVEEIMKLRRAGPGVADAHTTYST-----TASASLSEDAAGVAVSIEDRLEGQQPNKIKAWLGFRVQVVAAMQHNNLIDSARSEKLLLDTICKQRAAQTLNLEEALRRLEATRAALQKEYDDILVVKEELSKIVLKQNGILLDNSQELRKYAMLKVDHQVEIRRHERATKCLHEAESSIRGLDSQLERARKFADLAESTAKDAECARGAAVKEREAAINEVHVIREAME 3740
MEI+H DE ++VKL RQ++T R L+ESG+ LG S A+ ETYR K ET+SSEFSE+NNMLLRE+K+LKEKL +AGPEVVA++S ER+K ESR+RSANRTV +LES V ELQ ++++ +D++KV EME+HLLE SK+ KAMA ER++HAS DELRATV SLN L++A DK+AKL K F+DHEEN+ SI + D++ +DG+ F A +G+PEVV P EKSD +LVLELTEGLRRK E+ L A+ EE+ L+ A QA ++ + H +++N+KLLKMWN +R RL E E N SG+G S A P +E ++ A + RS KRARRSTRKG + S S A VMAVA+SYLEEDCR L + K ELQG+C NL+ Q + E RRELLSKATLAVAEH+MALHDA EGT+KVK ELE E+ TA ++KE MG +N LE GL ATK++LE+MT A +AEA AERNASQA XXXXXXXXXXX SR FL +V AE+ IA LG+EL K ELKRRR EAKEHAEQMKEF QVVAE+ +L++E T L+++QR A D+ +IEELKLQVVLLD MRKEVL LE ++RLQ EL T+ SL+A +Q + EQ LR + LNR LWAAL ++FL+DDWCAGPLLAWRE D +A P +PKPP EARAVE+I+KLRR PG ADA + T T A +S A +SI+DRLEGQ+P + AWL FRVQ+ A ++H + +DSARS+++LLD++CKQRAAQ N+EEA+RRLEATRAALQKE+D++LV KEEL + VLKQN +L DNS+ELRKY+ LKV+H E+R+H + +CL EAE +IR ++ +LERA A +A S AK+AE R +AV+ER+AA+ E IR+ ME
Sbjct: 1 MEIVHCDEKEVVKLRRQLETTRGELMESGKALGNSKAIVETYRAKAETASSEFSEINNMLLREIKMLKEKLANAGPEVVAKISEERDKAESRVRSANRTVSDLESVVVELQAQVQRDADDNLKVEEMEHHLLEASKETKAMAFERESHASAADELRATVASLNTDLQQANDKNAKLLKDFEDHEENSKRSI-----VKDAAS----------------------ADGS------------------FFADFNGKPEVVAPPSEKSDKMLVLELTEGLRRK------EEELEYWRAKVEEQNEERDRAVDKELMERELDAARKQAAAARSTVEVLHTASGGIVLKGKRDNKKLLKMWNDARARLQEAEGTNRSGDGSILSLPIIVSKVATEEHAPP------EEVKESAANLRSGKRARRSTRKGGRVSMRKVSNNSVDTSDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------XXAEGVMAVAISYLEEDCRRLGVAKGELQGYCNNLQIQLKSVQEXXXXXXXXXXXXXXXXXXXXXXXXXRRELLSKATLAVAEHSMALHDAQEGTDKVKQELEQERTATAQLGLQLKE---MGTVNGVLEAGLVATKHSLEIMTTAKGEAEAAAERNASQAKHNALXXXXXXXXXXXXXXXXXXESSRRFLSDVVAAERVDFIRAFLVFCTALSPGAVFVDAQIAFLGVELSKCVNELKRRRLEAKEHAEQMKEFWQVVAERARLEEEVASQRDTILDMRQRTAKDQTMIEELKLQVVLLDGMRKEVLSLEDKLERLQVELSATRTSLEASNQQRKVTEQDLRANIKLNRSLWAALTSSVFLLDDWCAGPLLAWRERDPAAEPPAMPKPPLEARAVEDIVKLRRQSPGGADATRSSLTSPPLPTEEAGVSAGAPATTMSIQDRLEGQRPRAVAAWLRFRVQI-ATVEHQDRVDSARSDQVLLDSVCKQRAAQISNMEEAMRRLEATRAALQKEHDELLVEKEELHETVLKQNDVLFDNSKELRKYSALKVEHAAEVRQHRKVARCLQEAEGNIRRVNIRLERAIGDAAVAASLAKEAESVRASAVEERKAAVVEAQTIRDTME 1036 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig123.48.10 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig123.48.10 >prot_P-littoralis_Contig123.48.10 ID=prot_P-littoralis_Contig123.48.10|Name=mRNA_P-littoralis_Contig123.48.10|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1409bp MANVDDAEFGDADTTRSGATLATLAIGDFGDDISLGDTSIATLEDLPSLPback to top mRNA from alignment at P-littoralis_Contig123:239823..255547- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig123.48.10 ID=mRNA_P-littoralis_Contig123.48.10|Name=mRNA_P-littoralis_Contig123.48.10|organism=Pylaiella littoralis U1_48|type=mRNA|length=15725bp|location=Sequence derived from alignment at P-littoralis_Contig123:239823..255547- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig123:239823..255547- >mRNA_P-littoralis_Contig123.48.10 ID=mRNA_P-littoralis_Contig123.48.10|Name=mRNA_P-littoralis_Contig123.48.10|organism=Pylaiella littoralis U1_48|type=CDS|length=4227bp|location=Sequence derived from alignment at P-littoralis_Contig123:239823..255547- (Pylaiella littoralis U1_48)back to top |