mRNA_P-littoralis_Contig123.45.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig123.45.2 vs. uniprot
Match: D7FJ18_ECTSI (CCR4-NOT transcription complex subunit 11 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJ18_ECTSI) HSP 1 Score: 852 bits (2202), Expect = 7.300e-309 Identity = 429/450 (95.33%), Postives = 438/450 (97.33%), Query Frame = 3
Query: 45 MLDAQELTPLLQLLNDEDDILENVAQKFHRIFTRNDHFKVGCALCILLCDNLLTRTQRVVSFSILCDLYRNDANGTNPFLPFFLEAIEKGTDPVERQYLVHLLCSPPTNRNSARKNALQVIAEYEGTPAGAVEVPDLSALRELYSEKNPAVPSLRAAGVRPVLPDPSDSSNEVGSWLPPRPEEQVGRAPGGAALRGGVGGKREAAAPIQPLTLDDMRLGEGGKDGSLSLASFEPEFMRPVPPMLPVADSEVMWLNPDYAPRLLWDTSMGQDTSKGAEVRGMMAKAFKEPLLPTQQQQVLSELQGDARLVYHCGLTPYKLPDLVENNPMIAIECLLKLMPSSQITEYLSALVNMDMSLHSMEVVNRLTTSVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVEDLFIEVQAFCIEFSRIREAAGLFRLLKTLE 1394
MLD+QELTPLLQLLNDEDDILENVAQKFHR FTRNDHFKVGCALCILLCDNLLT TQRVVSFSILCDLYRNDANGTNPFLPFFLEAIEKGTDPVERQYLVHLLCSPPTNRNSARKNALQVIAEYEGTPA AVEVPDLSALR+LYSEKNPAVPSLR AGVRPVL DPS+SSNEVGSWLPPRPEEQVGRAPGGAALRGGVGGKREA PIQPLTLDDMRL +GG+ GSLSLASFEPEFMRPVPPMLP+ADSEVMWLNPDYAPRLLWDTSMGQD+SKGAEVR +MAKAFK PLLPTQQQQVLSELQGDARLVYHCGLTP+KLPDLVENNPMIAIECLLKLM SSQITEYLSALVNMDMSLHSMEVVNRLTTSVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVEDLFIEVQAFCIEFSRIREAAGLFRLLKTLE
Sbjct: 1 MLDSQELTPLLQLLNDEDDILENVAQKFHRTFTRNDHFKVGCALCILLCDNLLTHTQRVVSFSILCDLYRNDANGTNPFLPFFLEAIEKGTDPVERQYLVHLLCSPPTNRNSARKNALQVIAEYEGTPAEAVEVPDLSALRQLYSEKNPAVPSLRTAGVRPVLADPSESSNEVGSWLPPRPEEQVGRAPGGAALRGGVGGKREAPTPIQPLTLDDMRLSKGGRGGSLSLASFEPEFMRPVPPMLPIADSEVMWLNPDYAPRLLWDTSMGQDSSKGAEVRDVMAKAFKGPLLPTQQQQVLSELQGDARLVYHCGLTPFKLPDLVENNPMIAIECLLKLMSSSQITEYLSALVNMDMSLHSMEVVNRLTTSVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVEDLFIEVQAFCIEFSRIREAAGLFRLLKTLE 450
BLAST of mRNA_P-littoralis_Contig123.45.2 vs. uniprot
Match: A0A2D4BNE6_PYTIN (CCR4-NOT transcription complex subunit 11 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BNE6_PYTIN) HSP 1 Score: 536 bits (1381), Expect = 2.960e-184 Identity = 285/452 (63.05%), Postives = 341/452 (75.44%), Query Frame = 3
Query: 45 MLDAQELTPLLQLLNDEDDILENVAQKFHRIFTRNDHFKVGCALCILLCDNLLTRTQRVVSFSILCDLYRNDANGTNPFLPFFLEAIEKGTDPVERQYLVHLLCSPPTNRNSARKNALQVIAEYEGTPAGAVEVP--DLSALRELYSEKNPAVPSLRAAGVRPVLPDPSDSSNEVGSWLPPRPEEQVGRAPGGAALRGGVGGKREAAAPIQPLTLDDMRLGEGGKDGSLSLASFEPEFMRPVPPMLPVADSEVMWLNPDYAPRLLWDTSMGQDTSKGAEVRGMMAKAFKEPLLPTQQQQVLSELQGDARLVYHCGLTPYKLPDLVENNPMIAIECLLKLMPSSQITEYLSALVNMDMSLHSMEVVNRLTTSVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVEDLFIEVQAFCIEFSRIREAAGLFRLLKTLE 1394
ML+A+EL PLL +LN++D LE V+ F R FT+NDHFKVGC +CILL DNLLT +QR+V FSILCDLYRN+A TNPFLP FLEA+EKGTDP E ++LVHLL S P+NR +++++A +++E A + ++P DL ALR++Y EK P VP LR AG+R V+ +DS ++ L V P V E L+LD GSLSL FEP+FMR PP++ +E++WLNPDY P LLWD +M +D+S G E+R +MA AF P +P+QQQ+VL++L+ D +LVYHC LTP +LPDLVENNPMIAIECLLKLM S+QITEYLSALVNMDMSLHSMEVVNRLTT+VDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINV+DL IEVQAFCIEFSRIREAAGLFRLLKTLE
Sbjct: 1 MLEARELRPLLTILNEDDKPLEQVSSAFSRTFTKNDHFKVGCTICILLQDNLLTSSQRIVGFSILCDLYRNEAASTNPFLPVFLEALEKGTDPCETKFLVHLLSSTPSNRETSKRSAKTILSELR---ANSSQIPPFDLEALRKVYKEKTPPVPQLRGAGIRNVV---TDSELDLQEHLNTSANVHV---PPNEVCMLNVPCAEELTIEEMGLSLDAAGAAGAPSAGSLSLQGFEPKFMRLPPPIMEPDMTELIWLNPDYCPTLLWDGTMFEDSSHGMELRELMAXAFVGPXIPSQQQKVLADLEADPKLVYHCSLTPQRLPDLVENNPMIAIECLLKLMSSNQITEYLSALVNMDMSLHSMEVVNRLTTAVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVQDLIIEVQAFCIEFSRIREAAGLFRLLKTLE 443
BLAST of mRNA_P-littoralis_Contig123.45.2 vs. uniprot
Match: A0A8K1CP59_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CP59_PYTOL) HSP 1 Score: 528 bits (1359), Expect = 5.130e-181 Identity = 275/456 (60.31%), Postives = 337/456 (73.90%), Query Frame = 3
Query: 45 MLDAQELTPLLQLLNDEDDILENVAQKFHRIFTRNDHFKVGCALCILLCDNLLTRTQRVVSFSILCDLYRNDANGTNPFLPFFLEAIEKGTDPVERQYLVHLLCSPPTNRNSARKNALQVIAEYEGTPAGAVEVPDLSALRELYSEKNPAVPSLRAAGVRPVLPDPS-----DSSNEVGSWLPPRPEEQVGRAPGGAALRGGVGGKREAAAPIQPLTLDDMRL-GEGGKDGSLSLASFEPEFMRPVPPMLPVADSEVMWLNPDYAPRLLWDTSMGQDTSKGAEVRGMMAKAFKEPLLPTQQQQVLSELQGDARLVYHCGLTPYKLPDLVENNPMIAIECLLKLMPSSQITEYLSALVNMDMSLHSMEVVNRLTTSVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVEDLFIEVQAFCIEFSRIREAAGLFRLLKTLE 1394
ML+ +EL PLL +LN+++ LE V F R FT+NDHFKVGC +CILL DNLLT +QR+V SIL DLYR++ GTNPFLP F E +EKG+D E+++++HLL +P NR S++K A ++AE+ + +V D+ AL+ Y E+ PAVP RAAG+R V+ D +N +PP + + L++++M L GE G SLSL SFEP FMR PP++ +E++WLNPDY P +LWD++M +D+S G E+R +MAKAF PL+P+QQQ+VL+EL+ D +LVYHC LTP +LPDLVENNPMIAIECLLKLM S+QITEYLSALVNMDMSLHSMEVVNRLTT+VDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINV+DL IEVQAFCIEFSRIREAAGLFRLLKTLE
Sbjct: 1 MLETRELRPLLAILNEDEKPLEQVGSSFARTFTKNDHFKVGCTICILLQDNLLTSSQRIVGLSILSDLYRSENTGTNPFLPVFFEVLEKGSDLSEKRFVLHLLSTPSANRESSKKGAKTLLAEFRANASPVAQV-DIDALKNAYKERTPAVPQFRAAGMRNVVTDTELDLQEQLNNGANVHIPPNEVSALN------------------VPSFEELSIEEMGLTGENGAPASLSLLSFEPSFMRLPPPIMEPEMTELIWLNPDYCPTVLWDSTMFEDSSHGLELRELMAKAFVGPLIPSQQQKVLAELEADPKLVYHCSLTPQRLPDLVENNPMIAIECLLKLMSSNQITEYLSALVNMDMSLHSMEVVNRLTTAVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVQDLIIEVQAFCIEFSRIREAAGLFRLLKTLE 437
BLAST of mRNA_P-littoralis_Contig123.45.2 vs. uniprot
Match: K3XBZ3_GLOUD (CCR4-NOT transcription complex subunit 11 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XBZ3_GLOUD) HSP 1 Score: 505 bits (1300), Expect = 4.050e-172 Identity = 277/456 (60.75%), Postives = 337/456 (73.90%), Query Frame = 3
Query: 45 MLDAQELTPLLQLLNDEDDILENVAQKFHRIFTRNDHFKVGCALCILLCDNLLTRTQRVVSFSILCDLYRNDANGTNPFLPFFLEAIEKGTDPVERQYLVHLLCSPPTNRNSARKNALQVIAEYEGTPAGAVEVP---DLSALRELYSEKNPAVPSLRAAGVRPVLPDPS-DSSNEVGSWLPPR-PEEQVGRAPGGAALRGGVGGKREAAAPIQPLTLDDMRL-GEGGKDGSLSLASFEPEFMRPVPPMLPVADSEVMWLNPDYAPRLLWDTSMGQDTSKGAEVRGMMAKAFKEPLLPTQQQQVLSELQGDARLVYHCGLTPYKLPDLVENNPMIAIECLLKLMPSSQITEYLSALVNMDMSLHSMEVVNRLTTSVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVEDLFIEVQAFCIEFSRIREAAGLFRLLKTLE 1394
ML+ +EL PLL +LN++D LE V F + +T+NDHFKVGC +CILL DNLLT +QRVV FSIL DLYRN++ GTNPFLP FLEA+EKG+D E+++LV LL + P+ ++ +K A VI E +P VP D+ R+ Y+EK PAVP RAAGVR V+ D D + + P P +V ++L + L+L++M L EG G LSL SFEP+FMR PP+L +E++WLNPDY P +LW+++M D+S G E+R +M KAF+ PL+P+ Q +VL EL+ + +LVY C LTP +LPDLVENNPMIAI+CLLKLM S+QITEYLSALVNMDMSLHSMEVVNRLTT+VDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINV+DL IEVQAFCIEFSRIREAAGLFRLLKTLE
Sbjct: 1 MLETRELRPLLSILNEDDKPLETVMSSFLKTYTKNDHFKVGCTICILLQDNLLTSSQRVVGFSILSDLYRNESAGTNPFLPVFLEALEKGSDISEKKFLVLLLSAAPSTKDMNKKTAKAVITELRQSP-----VPLQFDIEGFRKAYAEKTPAVPQFRAAGVRNVVTDTELDLQEHLNNGASPHVPPNEV------SSLN---------LPCFEALSLEEMSLISEGDASGPLSLLSFEPKFMRLPPPILEPDMTELIWLNPDYCPTMLWNSTM-LDSSHGMEIRELMLKAFQTPLIPSLQAKVLDELEVNPKLVYQCSLTPQRLPDLVENNPMIAIDCLLKLMSSNQITEYLSALVNMDMSLHSMEVVNRLTTAVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVQDLIIEVQAFCIEFSRIREAAGLFRLLKTLE 435
BLAST of mRNA_P-littoralis_Contig123.45.2 vs. uniprot
Match: H3H0V6_PHYRM (CCR4-NOT transcription complex subunit 11 n=30 Tax=Peronosporaceae TaxID=4777 RepID=H3H0V6_PHYRM) HSP 1 Score: 505 bits (1300), Expect = 8.150e-172 Identity = 273/458 (59.61%), Postives = 334/458 (72.93%), Query Frame = 3
Query: 45 MLDAQELTPLLQLLNDEDDILENVAQKFHRIFTRNDHFKVGCALCILLCDNLLTRTQRVVSFSILCDLYRNDANGTNPFLPFFLEAIEKGTDPVERQYLVHLLCSPPTNRNSARKNALQVIAEYEGTPAGAVEVPDLSALRELYSEKNPAVPSLRAAGVRPVLPDPSDS-----SNEVGSWLPPRPEEQVGRAPGGAAL---RGGVGGKREAAAPIQPLTLDDMRLGEGGKDGSLSLASFEPEFMRPVPPMLPVADSEVMWLNPDYAPRLLWDTSMGQDTSKGAEVRGMMAKAFKEPLLPTQQQQVLSELQGDARLVYHCGLTPYKLPDLVENNPMIAIECLLKLMPSSQITEYLSALVNMDMSLHSMEVVNRLTTSVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVEDLFIEVQAFCIEFSRIREAAGLFRLLKTLE 1394
ML+ +EL PLL +LN++D LE VA F FT+NDHFKVGC +CILL DNLLT +QR+V FSIL DLYRN+ TNPFLP FL+A+EKG+D E++ +VHLL + R+S++K A Q++AE+ P+ V+ D+ A+R Y E+ P+VP RAAG+R V+ D +N +PP + P AL + EA+ GSLSL SFEP FMR PP+L +E++WLNPDY P LLWD++M D++ G +R +M +AF++PL+P+ QQ+VL+EL+ D +LVYHC LTP +LPDLVENNPM+AI+CLLKLM S+QITEYLSALVNMDMSLHSMEVVNRLTT+VDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINV+DL IEVQAFCIEFSRIREAAGLFRLLKTLE
Sbjct: 1 MLEIRELRPLLAILNEDDKPLEQVASMFLHTFTKNDHFKVGCTICILLQDNLLTSSQRIVGFSILSDLYRNEGTTTNPFLPVFLDALEKGSDLCEKKLIVHLLTATGATRDSSKKAAKQLMAEFRANPSQPVQF-DVEAMRNSYLERTPSVPQFRAAGIRNVVTDTEFDLQEHVNNGANLQVPPNEVSSL-NLPCFEALSLEEMSLLSDAEASXXXXXXXXXXXXXXXXXXAGSLSLLSFEPTFMRLPPPILEPDMTELIWLNPDYCPTLLWDSTM-LDSTHGIALRELMLRAFQKPLVPSLQQKVLAELEADPKLVYHCSLTPQRLPDLVENNPMLAIDCLLKLMSSNQITEYLSALVNMDMSLHSMEVVNRLTTAVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVQDLIIEVQAFCIEFSRIREAAGLFRLLKTLE 455
BLAST of mRNA_P-littoralis_Contig123.45.2 vs. uniprot
Match: A0A484EAT0_BRELC (CCR4-NOT transcription complex subunit 11 n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EAT0_BRELC) HSP 1 Score: 495 bits (1274), Expect = 6.480e-168 Identity = 271/465 (58.28%), Postives = 335/465 (72.04%), Query Frame = 3
Query: 45 MLDAQELTPLLQLLNDEDDILENVAQKFHRIFTRNDHFKVGCALCILLCDNLLTRTQRVVSFSILCDLYRNDANGTNPFLPFFLEAIEKGTDPVERQYLVHLLCSPPTNRNSARKNALQVIAEYEGTPAGAVEVPDLSALRELYSEKNPAVPSLRAAGVRPVLPDPSDS-----SNEVGSWLPPRPEEQVGRAPGGAALRGGVGGKREAAAPIQPLTLDDMRLGEGGK----------DGSLSLASFEPEFMRPVPPMLPVADSEVMWLNPDYAPRLLWDTSMGQDTSKGAEVRGMMAKAFKEPLLPTQQQQVLSELQGDARLVYHCGLTPYKLPDLVENNPMIAIECLLKLMPSSQITEYLSALVNMDMSLHSMEVVNRLTTSVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVEDLFIEVQAFCIEFSRIREAAGLFRLLKTLE 1394
ML+ +EL PLL +LN++D LE V F R FT+NDHFKVGC +CILL DNLLT +QR+VSFSILCDLYR++ TNPFL F++A+EKG+D E+ ++VHLL + R+S++K+A Q +A++ P+ + + D+ ALR+ Y E+ P VP RAAG+R V+ D +N +PP + P AL + + L+ D+ G G GSLSL SFEP+FMR P +L +E +WLNPDY P LLWD++M D++ +R +M AF++PL+P+ QQ+VL+EL+ D +LVYHC LTP +LPDLVENNPM+AI CLLKLM S+QITEYLSALVNMDMSLHSMEVVNRLTT+VDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINV+DL IEVQAFCIEFSRIREAAGLFRLLKTLE
Sbjct: 1 MLEIRELRPLLAILNEDDKPLEQVTSLFLRTFTKNDHFKVGCTICILLQDNLLTSSQRIVSFSILCDLYRSEGTTTNPFLLVFVDALEKGSDLCEQNFIVHLLTTSGAPRDSSKKSAKQWMADFRTNPSPPLHI-DVEALRQNYLERTPLVPQFRAAGIRNVVTDSEFDLQEHVNNGANLQVPPNEVSSL-NLPCSEAL---------SLEEMSLLSDADVSSGSHGTASSSAASASCTGSLSLLSFEPKFMRLPPSILEPDMTEFIWLNPDYCPTLLWDSTM-LDSTHNIALRELMTCAFQKPLVPSLQQKVLAELEADPKLVYHCSLTPQRLPDLVENNPMLAINCLLKLMSSNQITEYLSALVNMDMSLHSMEVVNRLTTAVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVQDLIIEVQAFCIEFSRIREAAGLFRLLKTLE 453
BLAST of mRNA_P-littoralis_Contig123.45.2 vs. uniprot
Match: F0W6B0_9STRA (CCR4-NOT transcription complex subunit 11 n=2 Tax=Albugo TaxID=65356 RepID=F0W6B0_9STRA) HSP 1 Score: 482 bits (1240), Expect = 5.060e-162 Identity = 267/460 (58.04%), Postives = 325/460 (70.65%), Query Frame = 3
Query: 39 QTMLDAQELTPLLQLLNDEDDILENVAQKFHRIFTRNDHFKVGCALCILLCDNLLTRTQRVVSFSILCDLYRND-ANGTNPFLPFFLEAIEKGTDPVERQYLVHLLCSPPTNRNSARKNALQVIAEYEGTPAGAVEVPDLSALRELYSEKNPAVPSLRAAGVRPVLPDPSDSSNEV---GSWLPPRPEEQVGRAPGGAALRGGVGGKREAAAP-IQPLTLDDM---RLGEGGKDGSLSLASFEPEFMRPVPPMLPVADSEVMWLNPDYAPRLLWDTSMGQDTSKGAEVRGMMAKAFKEPLLPTQQQQVLSELQGDARLVYHCGLTPYKLPDLVENNPMIAIECLLKLMPSSQITEYLSALVNMDMSLHSMEVVNRLTTSVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVEDLFIEVQAFCIEFSRIREAAGLFRLLKTLE 1394
+TML+ +EL PLL +L++ D LE V F + +T+NDHF++GC + ILL DNLLT QR + FSIL DLYRN+ ++ NPFLP FL A EKG D E+++L HLL S ++R +K+A V+ E+ V D+ L+ Y E+ PAVP LRA+G+R V+ D E G+ L P E +L A P + T+++ + G +G LSL SFEP FMRP P +L SE++WLNPDY P +LWD +M +D S E+R +M+KAF PL+P+ QQ+VL+EL D ++VYH LTP +LPDLVENNPMIAIECLLKLM S+QITEYLSALVNMDMSLHSMEVVNRLTT+VDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINV+DL IEVQAFCIEFSRIREAAGLFRLLKTLE
Sbjct: 63 ETMLEMRELRPLLAILSESDKPLEQVTNAFLKTYTKNDHFRIGCIVSILLQDNLLTSAQRFIGFSILFDLYRNEGSHAINPFLPIFLNAYEKGNDVYEKKFLSHLLSSA-SSRELNKKSANAVLQEFRSDTTQTVHAIDVDKLQAWYQERTPAVPQLRASGIRNVIADSELDYQEHMNNGNCLQLAPNE--------VSL---------ANIPCLDEWTMEEFSEEKDASGKTNGYLSLLSFEPPFMRPPPSVLEPEMSELIWLNPDYCPSVLWDDTMFEDASHELELRDLMSKAFLNPLIPSHQQKVLAELDADPKIVYHSALTPQRLPDLVENNPMIAIECLLKLMSSNQITEYLSALVNMDMSLHSMEVVNRLTTAVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVQDLIIEVQAFCIEFSRIREAAGLFRLLKTLE 504
BLAST of mRNA_P-littoralis_Contig123.45.2 vs. uniprot
Match: A0A836CN98_9STRA (CCR4-NOT transcription complex subunit 11 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN98_9STRA) HSP 1 Score: 473 bits (1218), Expect = 1.750e-159 Identity = 266/465 (57.20%), Postives = 324/465 (69.68%), Query Frame = 3
Query: 45 MLDAQELTPLLQLLNDEDDILENVAQKFHRIFTRNDHFKVGCALCILLCDNLLTRTQRVVSFSILCDLYRNDANGTNPFLPFFLEAIEKGTDPVERQYLVHLLCSPPTN-----RNSARKNALQVIAEYEGTPAGAVEVPDLSALRELYSEKNPA-----VPSLRAAGVRPVLPDPSDSSNEVGSWLPPRPEEQVGRAPGGAALRGGV--GGKREAA---APIQPLTLDDMRLGEGGKDGSLSLASFEPEFMRPVPPMLPVADSEVMWLNPDYAPRLLWDTSMGQDTSKGAEVRGMMAKAFKEPLLPTQQQQVLSELQGDARLVYHCGLTPYKLPDLVENNPMIAIECLLKLMPSSQITEYLSALVNMDMSLHSMEVVNRLTTSVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVEDLFIEVQAFCIEFSRIREAAGLFRLLKTLE 1394
ML+ ++L LL +L+D ++ +E VA +F R F D+F++GC++C+LL DNLLT QRV + +L ++ ++G+NPF L+ E+ D ER+ R A A V+ E+E +P D+++LR ++E+ P LRAAG+RPVL DP + G+ G A GG GKR AA AP PL + M L EG + GSL++ FEPE +RPVPP+LPV SEVMWL+P+YAPR LWD S+GQD+S+GAEVR ++ +AFK PL QQQQVL+ELQ D+RLVY CGLTP KLP LVENNPMIA+ECL +LM SSQITE+LSALVNMDMSLHSMEVVNRLTTSVDLPTEFIHLYISNCISSCENI+DKYMQNRLVRLVCVFLQSLIRNKIINV+ LFIEVQAFCIEFSRIREAAGLFRLLKTLE
Sbjct: 1 MLEPRQLDDLLTVLSDNEEAVETVAGRFQRAFAATDYFRIGCSVCMLLADNLLTSAQRVAAIILLWSWGKDGSSGSNPFHGTLLQIAEETADARERRLXXXXXXXXXXXXXXXXRAWALLPAAAVLGEFE-SPQSEEGASDVTSLRRAHAERERGGAGVRAPGLRAAGLRPVLADPCEGGRTWGTG-------------GSAWFAGGPRGAGKRPAAGRRAPETPLPPEAMALMEGPEGGSLTMEGFEPEIIRPVPPLLPVEASEVMWLHPEYAPRFLWDASLGQDSSRGAEVRQLVGRAFKAPLPQAQQQQVLAELQADSRLVYLCGLTPQKLPALVENNPMIAVECLQRLMSSSQITEHLSALVNMDMSLHSMEVVNRLTTSVDLPTEFIHLYISNCISSCENIRDKYMQNRLVRLVCVFLQSLIRNKIINVQALFIEVQAFCIEFSRIREAAGLFRLLKTLE 451
BLAST of mRNA_P-littoralis_Contig123.45.2 vs. uniprot
Match: A0A7S2RYB1_9STRA (CCR4-NOT transcription complex subunit 11 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RYB1_9STRA) HSP 1 Score: 468 bits (1205), Expect = 1.450e-157 Identity = 264/460 (57.39%), Postives = 329/460 (71.52%), Query Frame = 3
Query: 39 QTMLDAQELTPLLQLLNDEDDILENVAQKFHRIFTRNDHFKVGCALCILLCDNLLTRTQRVVSFSILCDLYRNDANGT-NPFLPFFLEAIEKGTDPVERQYLVHLLCSPPTNRNSARKNA----LQVIAEYEGTPAGAVEVPDLSALRELYSEKNPAVPSLRAAGVRPVLPDPSDSSNEVGSWLPPRPEEQVGRAPGGAALR--GGVGGKREAA-APIQPLTLDDMRLGEGGKDGSLSLASFEPEFMRPVPPMLPVADSEVMWLNPDYAPRLLWDTSMGQDTSKGAEVRGMMAKAFKEPLLPTQQQQVLSELQGDARLVYHCGLTPYKLPDLVENNPMIAIECLLKLMPSSQITEYLSALVNMDMSLHSMEVVNRLTTSVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVEDLFIEVQAFCIEFSRIREAAGLFRLLKTLE 1394
+ +L EL LL +L+ + + LE V F R F+RNDH+K+ CAL ILL D LLTRTQR++SF +L +L+ N NPFLP FL +E +D E+ ++ L+ R+S RK + L+ + + + PA EVP+++ LR+ + + +P+ P L +A VRPV+ DP D E G + P A GGA + EA AP + L+ D+MR G + ++ L P F RP+PP+L V D+E+MW+NPDYAPRLLWD+++ +D +KG EVR +M+KAFK PL +QQ VL+EL+ D RLVYHCGLTP KLP+LVENNP+IAIECLLKLM S+Q+ EYLSALVNMDMSLHSMEVVNRLTT+VDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIR KIINV+DLFIEVQAFCIEFSRIREAAGLFRLLKTLE
Sbjct: 3 KALLTRAELDALLTVLSVDGNPLEAVLADFQRAFSRNDHYKLCCALNILLVDQLLTRTQRIISFFVLHELFGLAGNAAVNPFLPSFLATLEGPSDTPEQPFVAGLIGPSSAYRDSVRKKSARDLLEDLVQRKAMPA---EVPNVATLRQKHLDSSPSPPGLDSATVRPVVHDPLD---ENGLGVVP--------AAGGAXXXXTASPSPRPEAHFAPTESLSPDEMRELLGPEAAAMGLGGLRPPFPRPMPPLLTVTDAELMWINPDYAPRLLWDSTLCRDNAKGQEVRELMSKAFKGPLKLDEQQHVLNELENDNRLVYHCGLTPQKLPELVENNPIIAIECLLKLMSSNQLNEYLSALVNMDMSLHSMEVVNRLTTAVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRTKIINVQDLFIEVQAFCIEFSRIREAAGLFRLLKTLE 448
BLAST of mRNA_P-littoralis_Contig123.45.2 vs. uniprot
Match: A0A067CRR8_SAPPC (CCR4-NOT transcription complex subunit 11 n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CRR8_SAPPC) HSP 1 Score: 461 bits (1186), Expect = 6.170e-155 Identity = 262/457 (57.33%), Postives = 320/457 (70.02%), Query Frame = 3
Query: 45 MLDAQELTPLLQLLNDEDDILENVAQKFHRIFTRNDHFKVGCALCILLCDNLLTRTQRVVSFSILCDLYRNDANGTNPFLPFFLEAIEKGT-DPVERQYLVHLLC---SPPTNRNSARKNALQVIAEYEGTPAGAVEVPDLSALRELYSEKNPAVPSLRAAGVRPVLPDPSDSSNEVGSWLPPRPEEQVGRAPGGAALRGGVGGKREAAAPIQP-LTLDDMRLGEGGKDGSLSLASFEPEFMRPVPPMLPVADSEVMWLNPDYAPRLLWDTSMGQDTSK--GAEVRGMMAKAFKEPLLPTQQQQVLSELQGDARLVYHCGLTPYKLPDLVENNPMIAIECLLKLMPSSQITEYLSALVNMDMSLHSMEVVNRLTTSVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVEDLFIEVQAFCIEFSRIREAAGLFRLLKTLE 1394
ML+A+E+ PLL LL++ED +E V F R FT+NDHFKVGC +C++L DN+LT QRVV FSIL +++RN+ N TNPF P +EA+E DP E++YL+HLL +P + + NA Q++ + V +L A ++LY ++ P VP + G+R VLP + E G++ + AP A +P LT DD+ L + +L S P F+RP P +L SE MWL+PDY P LLWDT M +D G E+R +MAKAF PL+P+QQQ+VL++L+ D +LVY C LTP +LPDLVENNPMIAIECLLKLM S+QITEYLSALVNMDMSLHSMEVVNRLTT+VDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINV+DL IEVQAFCIEFSRIREAAGLFRLLKTLE
Sbjct: 1 MLEAREMGPLLALLSEEDKSVEVVVSMFLRSFTKNDHFKVGCMVCLMLADNVLTSNQRVVGFSILSEVFRNETN-TNPFFPSLVEALEAPHGDPAEKRYLIHLLARMSAPGSEPSKKNLNAKQLLQHFRNETK--VASLNLDAEKQLYFDRTPRVPESLSQGIRGVLPYSALEFQEHGNY-------NLLLAPADIAAM---------TLDDEPTLTADDLNL------ETCTLQSVNPVFVRPAPTILEPEISEYMWLDPDYCPTLLWDTGMYEDADVDCGRELRDLMAKAFVGPLVPSQQQKVLADLEADPKLVYACQLTPARLPDLVENNPMIAIECLLKLMTSNQITEYLSALVNMDMSLHSMEVVNRLTTAVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVQDLIIEVQAFCIEFSRIREAAGLFRLLKTLE 432 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig123.45.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig123.45.2 >prot_P-littoralis_Contig123.45.2 ID=prot_P-littoralis_Contig123.45.2|Name=mRNA_P-littoralis_Contig123.45.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=451bp MLDAQELTPLLQLLNDEDDILENVAQKFHRIFTRNDHFKVGCALCILLCDback to top mRNA from alignment at P-littoralis_Contig123:229743..235849+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig123.45.2 ID=mRNA_P-littoralis_Contig123.45.2|Name=mRNA_P-littoralis_Contig123.45.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=6107bp|location=Sequence derived from alignment at P-littoralis_Contig123:229743..235849+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig123:229743..235849+ >mRNA_P-littoralis_Contig123.45.2 ID=mRNA_P-littoralis_Contig123.45.2|Name=mRNA_P-littoralis_Contig123.45.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1353bp|location=Sequence derived from alignment at P-littoralis_Contig123:229743..235849+ (Pylaiella littoralis U1_48)back to top |