mRNA_P-littoralis_Contig1229.21.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1229.21.1
Unique NamemRNA_P-littoralis_Contig1229.21.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1229.21.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE)

HSP 1 Score: 569 bits (1466), Expect = 1.000e-201
Identity = 269/320 (84.06%), Postives = 291/320 (90.94%), Query Frame = 1
Query:    1 VMACLTILARGNCFGSIYMLSWMSSAVVQKTFHKFCKHFATEMYDEHIFLPTDENGELDRVMGQYEKLGFPGAMGSTDVTHIAWGRCPYNQARSYTGKEGKPTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVDRIRKDKQYTEKTFDVYNKDGTTRTLKGCYLIVDNGYHKWRTLIEPSKYPLSVGDLLFSKRLESVRKDVECFFGILKIRFRILKLAMTYQEQERIDYVFFTCCILHNMLHTFDGMDDLEENVNWVSSAELQSTWEHNVDSTSVGTKDVNEKPQIEAGHALLKRQLTTSYLYRKKIKRDIVW 960
            V+ACLTIL RGN FGSIY LSWMS+  VQK FH+FC+HFATEMYDEHIFLP++ENGELDRVMGQYEKLGFPGAMGSTDVTHI W RCPYNQ RSYTGKEGKPT+GYQVTVNHAGRVLAVTEGFTGSTNDKTIIC D AVDRIR DKQY EK F V+ KDGTT TLKGCYLIVDNGYHKWR LIEPSKYPLS  DLLFSKRLESVRKDVECFFGILK+RFRILKLAMTYQ+QER+DYVFFTCCILHNMLHT DGM  LEE+VNWV SAELQ+T  HN+DS+SVGTKD+N+KPQ+EA HA LKR+LTT++LYRKK K+DIVW
Sbjct:  128 VLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVGSAELQNTSGHNLDSSSVGTKDLNDKPQVEAAHAELKRKLTTNFLYRKKHKKDIVW 447          
BLAST of mRNA_P-littoralis_Contig1229.21.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE)

HSP 1 Score: 494 bits (1272), Expect = 1.750e-172
Identity = 245/350 (70.00%), Postives = 271/350 (77.43%), Query Frame = 1
Query:    1 VMACLTILARGNCFGSIYMLSWMSSAVVQKTFHKFCKHFATEMYDEHIFLPTDENGELDRVMGQYEKLGFPGAMGSTDVTHIAWGRCPYNQARSYTGKEGKPTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVDRIRKDKQYT----------------------------EKTFDVYNKDGTTRTLKGCYLIVDNGYHKWRTLIEPSKYPLSVGDLLFSKRLESVRKDVECFFGILKIRFRILKLAMTYQEQERIDYVFFTCCILHNMLHTFDGMDDLEENVNWVSSAELQSTW--EHNVDSTSVGTKDVNEKPQIEAGHALLKRQLTTSYLYRKKIKRDIVW 960
            V+A LTIL RGNCF SIY +SWMS+  VQ  FHKFC+HFA EMYDE I LPT+E+G+LD VM QY++LGF GA+GS DVTHIAW RCPYNQARSYTGKEG PTI YQVTV+HAGR +AVTEGFTGSTNDKTI+CWD AV++I  DK YT                            EKTFDVYN+DGTT TLKGCYL+VDNGYHKW+ LIEPSKYPLS  DLLFSKRLESVRKDVECFFGILK RFRILKLAM YQ QERID VFFTC ILHNMLHTFDGMD L EN NWVSSA + +T   E   D  SVGTKDVN++PQ+E  H + KRQLTTS+ YRKK K+DIVW
Sbjct:   86 VLAWLTILGRGNCFASIYQMSWMSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMEYQSQERIDNVFFTCYILHNMLHTFDGMDQLVENTNWVSSAGVGATLTTEPEADCGSVGTKDVNDQPQLEIEHTVRKRQLTTSFAYRKKHKKDIVW 435          
BLAST of mRNA_P-littoralis_Contig1229.21.1 vs. uniprot
Match: A0A6H5JUX7_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX7_9PHAE)

HSP 1 Score: 464 bits (1194), Expect = 2.610e-162
Identity = 227/322 (70.50%), Postives = 255/322 (79.19%), Query Frame = 1
Query:    1 VMACLTILARGNCFGSIYMLSWMSSAVVQKTFHKFCKHFATEMYDEHIFLPTDENGELDRVMGQYEKLGFPGAMGSTDVTHIAWGRCPYNQARSYTGKEGKPTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVDRIRKDKQYTEKTFDVYNKDGTTRTLKGCYLIVDNGYHKWRTLIEPSKYPLSVGDLLFSKRLESVRKDVECFFGILKIRFRILKLAMTYQEQERIDYVFFTCCILHNMLHTFDGMDDLEENVNWVSSAELQSTW--EHNVDSTSVGTKDVNEKPQIEAGHALLKRQLTTSYLYRKKIKRDIVW 960
            V+A LTIL +GNCF SI+ +SWMS+  VQ  FHKFC+ FA EMYDEHI LP +E+G+L  VM QY++LG                 CPYNQARSYTGK+  PTI YQVTV+HA R +AVTEGFTGSTNDKTI+CWDAAVD+IR DKQYTEKTFD+YN+DGTT TLKGCY + DNGYHKW+ LIEPSKYPLS  DLLFSKRLESVRKDVECFFGILK RFRILKLAM YQ QERID VFFTCCILHNMLHTFDGMD L EN NWVSSA + +T   E   D  S GTKDVN++PQ+E GH + KRQLTTS+ YRKK K+DIVW
Sbjct:   21 VLAWLTILGKGNCFASIFQMSWMSAKTVQGVFHKFCRLFAREMYDEHIHLPAEESGKLHHVMKQYDRLG-----------------CPYNQARSYTGKDWFPTIAYQVTVDHASRAIAVTEGFTGSTNDKTIVCWDAAVDKIRTDKQYTEKTFDLYNEDGTTTTLKGCYFLDDNGYHKWQILIEPSKYPLSEDDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGVGTTLATEPEADCGSFGTKDVNDQPQLEIGHTVRKRQLTTSFAYRKKHKKDIVW 325          
BLAST of mRNA_P-littoralis_Contig1229.21.1 vs. uniprot
Match: D7FSK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK2_ECTSI)

HSP 1 Score: 459 bits (1181), Expect = 6.580e-161
Identity = 220/280 (78.57%), Postives = 244/280 (87.14%), Query Frame = 1
Query:  127 MYDEHIFLPTDENGELDRVMGQYEKLGFPGAMGSTDVTHIAWGRCPYNQARSYTGKEGKPTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVDRIRKDKQYTEKTFDVYNKDGTTRTLKGCYLIVDNGYHKWRTLIEPSKYPLSVGDLLFSKRLESVRKDVECFFGILKIRFRILKLAMTYQEQERIDYVFFTCCILHNMLHTFDGMDDLEENVNWVSSAELQST--WEHNVDSTSVGTKDVNEKPQIEAGHALLKRQLTTSYLYRKKIKRDIVW 960
            MYDEHI LPT+E+G+LD V+ QY++LGF GAMGS DVTHIAW RCPYNQARSYTGKEG PTIGYQVTV+HAGR +AVTEGFTGSTNDKT +CWDAAV++IR DKQYTEKTFDVYN+DGTT TLKGCY++VDNGYHKW+ LIEPSKYPLS  DLLFSKRLESVRKDVECFFGILK R RIL LAM +Q QERID VFFTCCILHNMLHTFDGMD L EN NWVSSA + +T   E   DS SVGTKDVN +PQ+EAGHA+ KRQLTTS+ YRKK K+DIV+
Sbjct:    1 MYDEHIHLPTEESGKLDLVIEQYDRLGFTGAMGSMDVTHIAWSRCPYNQARSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKTTVCWDAAVEKIRTDKQYTEKTFDVYNQDGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRLRILMLAMAFQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGVGTTSVTEPEADSGSVGTKDVNGRPQVEAGHAVRKRQLTTSFAYRKKHKKDIVY 280          
BLAST of mRNA_P-littoralis_Contig1229.21.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE)

HSP 1 Score: 462 bits (1190), Expect = 9.520e-161
Identity = 217/292 (74.32%), Postives = 243/292 (83.22%), Query Frame = 1
Query:    1 VMACLTILARGNCFGSIYMLSWMSSAVVQKTFHKFCKHFATEMYDEHIFLPTDENGELDRVMGQYEKLGFPGAMGSTDVTHIAWGRCPYNQARSYTGKEGKPTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVDRIRKDKQYTEKTFDVYNKDGTTRTLKGCYLIVDNGYHKWRTLIEPSKYPLSVGDLLFSKRLESVRKDVECFFGILKIRFRILKLAMTYQEQERIDYVFFTCCILHNMLHTFDGMDDLEENVNWVSSAELQS--TWEHNVDSTSVGTKDVNEK 870
            V+A LTIL RGNCF SIY +SWMS+  VQ  FHKFCKHFA EMYDEHI+LP+++NGELD VM QY++LGF GAMGS DVTHI W +CPYN ARSYTGKEG PT+GYQVTVNHAGR +AVTEGFT STNDKT +CWDA V++IR D QYTEKTFDVYN+DGTT TLKGCYL+VDNGYHKW+ L+EP+KYPLS  D+LFSKRLESVRKDVECFFGILK  FRI K+AM Y EQERID VFFTCCILHNMLHTFDGMD L EN  WVSSA   +    E   DS++VG KD N+K
Sbjct:   99 VLAWLTILGRGNCFASIYQVSWMSAKTVQTMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTVCWDAVVEKIRTDNQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWKILMEPTKYPLSENDILFSKRLESVRKDVECFFGILKGCFRIQKVAMAYHEQERIDNVFFTCCILHNMLHTFDGMDQLVENTLWVSSAGAGTGVATEQEADSSTVGAKDTNDK 390          
BLAST of mRNA_P-littoralis_Contig1229.21.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE)

HSP 1 Score: 410 bits (1054), Expect = 7.490e-140
Identity = 198/323 (61.30%), Postives = 248/323 (76.78%), Query Frame = 1
Query:    1 VMACLTILARGNCFGSIYMLSWMSSAVVQKTFHKFCKHFATEMYDEHIFLPTDENGELDRVMGQYEKLGFPGAMGSTDVTHIAWGRCPYNQARSYTGKEGKPTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVDRIRKDKQYTEKTFDVYNKDGTTRTLKGCYLIVDNGYHKWRTLIEPSKYPLSVGDLLFSKRLESVRKDVECFFGILKIRFRILKLAMTYQEQERIDYVFFTCCILHNMLHTFDGMDDLEENVNWVSSAELQSTWEH--NVDSTSVGTKD-VNEKPQIEAGHALLKRQLTTSYLYRKKIKRDIVW 960
            V+ACL IL+RGN F  IY +S++S   V  TFH+FCK+FA E+YDE+++LPT E  +L +VM QY+++GFPGA+GSTDVTHI WG CPYNQAR YTGKEGKPT+ +QVTV+H+GRVLAVT GFTG+TNDKTII +D AV RIR D  YTE+ + +Y +DG     KGCYL+VDNGYHKWRTLI PSK P+  GDL+FSKRLES RKDVEC+FGILK RFRI KLA+ + +QE ID VFFTCCILHNMLH+FD   D+ E  NW  SA L +  +   N D +SVG+ D  +E  ++E G   L+ +L T+++YR++ KRDIVW
Sbjct:   84 VLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGE--DLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNAADRDPNTDYSSVGSMDGQHEAVEVETGFGALRSKLVTNFVYRREKKRDIVW 404          
BLAST of mRNA_P-littoralis_Contig1229.21.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE)

HSP 1 Score: 410 bits (1054), Expect = 1.520e-138
Identity = 198/323 (61.30%), Postives = 248/323 (76.78%), Query Frame = 1
Query:    1 VMACLTILARGNCFGSIYMLSWMSSAVVQKTFHKFCKHFATEMYDEHIFLPTDENGELDRVMGQYEKLGFPGAMGSTDVTHIAWGRCPYNQARSYTGKEGKPTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVDRIRKDKQYTEKTFDVYNKDGTTRTLKGCYLIVDNGYHKWRTLIEPSKYPLSVGDLLFSKRLESVRKDVECFFGILKIRFRILKLAMTYQEQERIDYVFFTCCILHNMLHTFDGMDDLEENVNWVSSAELQSTWEH--NVDSTSVGTKD-VNEKPQIEAGHALLKRQLTTSYLYRKKIKRDIVW 960
            V+ACL IL+RGN F  IY +S++S   V  TFH+FCK+FA E+YDE+++LPT E  +L +VM QY+++GFPGA+GSTDVTHI WG CPYNQAR YTGKEGKPT+ +QVTV+H+GRVLAVT GFTG+TNDKTII +D AV RIR D  YTE+ + +Y +DG     KGCYL+VDNGYHKWRTLI PSK P+  GDL+FSKRLES RKDVEC+FGILK RFRI KLA+ + +QE ID VFFTCCILHNMLH+FD   D+ E  NW  SA L +  +   N D +SVG+ D  +E  ++E G   L+ +L T+++YR++ KRDIVW
Sbjct:  175 VLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGE--DLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNAADRDPNTDYSSVGSMDGQHEAVEVETGFGALRSKLVTNFVYRREKKRDIVW 495          
BLAST of mRNA_P-littoralis_Contig1229.21.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE)

HSP 1 Score: 409 bits (1052), Expect = 1.880e-138
Identity = 202/325 (62.15%), Postives = 243/325 (74.77%), Query Frame = 1
Query:    1 VMACLTILARGNCFGSIYMLSWMSSAVVQKTFHKFCKHFATEMYDEHIFLPTDENGELDRVMGQYEKLGFPGAMGSTDVTHIAWGRCPYNQARSYTGKEGKPTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVDRIRKDKQYTEKTFDVYNKDGTTRTLKGCYLIVDNGYHKWRTLIEPSKYPLSVGDLLFSKRLESVRKDVECFFGILKIRFRILKLAMTYQEQERIDYVFFTCCILHNMLHTFDGMDDLEENVNWVSSAELQSTWEHN--VDSTSVGTKDVN---EKPQIEAGHALLKRQLTTSYLYRKKIKRDIVW 960
            V+ACL ILARGNCF  IY +S++S      TFH+F ++FA EMY EHIFLPT +  +  +VM QY++LGF GA GSTDVTHI WG CPYNQARSYTGKEG PT+ YQVTV+H  RVLAVT GFTGSTNDK+II +D AV +IR+D  Y+EK F VY  DGT   LKGCYL+VDNGYHKW TLI PSKYP+   DL FSKRLESVRKDVECFFGI+K RFRILKL++ Y +QE ID VFFTCCILHNMLH++D   ++EE  NW  +A L + WEHN  +D +SVG K  +   E  ++E+G    ++QL  S++YRK  K DI W
Sbjct:  159 VLACLQILARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPTGDYQK--KVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHNAWEHNPSLDLSSVGAKGSSASTEDVEVESGFNTRRKQLIASFVYRKS-KNDIAW 480          
BLAST of mRNA_P-littoralis_Contig1229.21.1 vs. uniprot
Match: A0A6H5L0X4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0X4_9PHAE)

HSP 1 Score: 374 bits (960), Expect = 7.550e-125
Identity = 196/322 (60.87%), Postives = 224/322 (69.57%), Query Frame = 1
Query:    1 VMACLTILARGNCFGSIYMLSWMSSAVVQKTFHKFCKHFATEMYDEHIFLPTDENGELDRVMGQYEKLGFPGAMGSTDVTHIAWGRCPYNQARSYTGKEGKPTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVDRIRKDKQYTEKTFDVYNKDGTTRTLKGCYLIVDNGYHKWRTLIEPSKYPLSVGDLLFSKRLESVRKDVECFFGILKIRFRILKLAMTYQEQERIDYVFFTCCILHNMLHTFDGMDDLEENVNWVSSAELQSTW--EHNVDSTSVGTKDVNEKPQIEAGHALLKRQLTTSYLYRKKIKRDIVW 960
            V+A LTIL R NCF SI+ +SWMS+  VQ  FHKFC+HFA +MYDEHI L  +E+G+LD V+      G                 CPYNQARSYTGKEG PTI YQV                      TI+CWDAAV++IR DKQYTEKTFDVYN+DGTT TLKG YL+VDNGYHKW+ LIEPSKYPLS  DLLFSKRL+SVR+D     GILK RFRILKLAM YQ QERID VFFTCCI+HNMLHTFDGMD L EN   VSSA + +T   E   D  SVG +DVN++PQ+E G  + KRQLTTS+ YRKK K+DIVW
Sbjct:  173 VLAWLTILGRNNCFASIFQVSWMSAKTVQGMFHKFCRHFARDMYDEHIHLLAEESGKLDHVVRSGWVYG-----------------CPYNQARSYTGKEGFPTIAYQVV---------------------TIVCWDAAVEKIRTDKQYTEKTFDVYNEDGTTTTLKGWYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLDSVRRDGSASDGILKGRFRILKLAMAYQSQERIDDVFFTCCIMHNMLHTFDGMDQLVENTIRVSSAGVGATLATELEADCGSVGRRDVNDQPQLEIGRTVRKRQLTTSFAYRKKHKKDIVW 456          
BLAST of mRNA_P-littoralis_Contig1229.21.1 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE)

HSP 1 Score: 354 bits (908), Expect = 2.900e-118
Identity = 183/332 (55.12%), Postives = 221/332 (66.57%), Query Frame = 1
Query:   19 ILARGNCFGSIYMLSWMSSAVVQKTFHKFCKHFATEMYDEHIFLPTDENGELDRVMGQYEKLGFPGAMGSTDVTHIAWGRCPYNQARSYTGKEGKPTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVDRIRKDKQYTEKTFDVYNKDGTTRTLKGCYLIVDNGYHKWRTLIEPSKYPLSVGDLLFSKRLESVRKDVECFFGILKIRFRILKLAMTYQEQERIDYVFFTCCILHNMLHTFDGMDDLEENVNWVSSAELQSTWEHN--VDSTSVGTKDV------NEKPQIEAG----------HALLKRQLTTSYLYRKKIKRDIVW 960
            +L +GNCF  +  LS MS ++ Q TFHKFC+HFA EM+DEHI+LPT     LD VMG + +LG+ GA GSTDVTHI W  CP+   RS+TGKEG PTI Y VTV+H GR LAVT GFTG+TNDKTII +D+ V++IR   QYTE+ + +   +GT R  +GC+LIVDNGYH+W TLI PSKYP    D  FS+ LESVRKDV CF        RILKL M Y ++E +D +FFTCCILHNMLHTFDG+D  EEN +W  SA     WEH+   D TSVG+K V       EK +   G          HA LKRQL  S+ +RKKI  DI W
Sbjct:   43 VLGKGNCFDDVEQLSKMSKSMAQPTFHKFCRHFAAEMFDEHIYLPTGTY--LDEVMGIFHQLGWTGACGSTDVTHIGWNMCPFTLGRSFTGKEGFPTIAYDVTVDHDGRDLAVTNGFTGATNDKTIIRYDSGVNKIRTASQYTEREYKLRKANGTKRMRRGCFLIVDNGYHEWVTLIAPSKYPQRNEDTAFSRDLESVRKDVGCF--------RILKLRMPYHKREYVDNIFFTCCILHNMLHTFDGLDVFEENTDWTGSAGHHDAWEHDPLTDYTSVGSKGVLLPPKEGEKAECGEGGHVRKERHPDHAELKRQLIESFAFRKKIN-DITW 363          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1229.21.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JBE2_9PHAE1.000e-20184.06Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNX4_9PHAE1.750e-17270.00DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JUX7_9PHAE2.610e-16270.50DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
D7FSK2_ECTSI6.580e-16178.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JHI0_9PHAE9.520e-16174.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KY50_9PHAE7.490e-14061.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPH7_9PHAE1.520e-13861.30Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JAU4_9PHAE1.880e-13862.15Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L0X4_9PHAE7.550e-12560.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K796_9PHAE2.900e-11855.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1229contigP-littoralis_Contig1229:49578..50860 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FSK2
PFAMsPlant_tran
Model size960
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue1.04e-161
EggNOG OGs2E2RF@1|root,2S9YA@2759|Eukaryota
DescriptionPlant transposon protein
Cds size957
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789532.3499796-CDS-P-littoralis_Contig1229:49577..500031680789532.3499796-CDS-P-littoralis_Contig1229:49577..50003Pylaiella littoralis U1_48CDSP-littoralis_Contig1229 49578..50003 -
1680789532.3595643-CDS-P-littoralis_Contig1229:50326..508571680789532.3595643-CDS-P-littoralis_Contig1229:50326..50857Pylaiella littoralis U1_48CDSP-littoralis_Contig1229 50327..50857 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789532.3679311-UTR-P-littoralis_Contig1229:50857..508601680789532.3679311-UTR-P-littoralis_Contig1229:50857..50860Pylaiella littoralis U1_48UTRP-littoralis_Contig1229 50858..50860 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1229.21.1prot_P-littoralis_Contig1229.21.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1229 49578..50857 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1229.21.1

>prot_P-littoralis_Contig1229.21.1 ID=prot_P-littoralis_Contig1229.21.1|Name=mRNA_P-littoralis_Contig1229.21.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=319bp
MACLTILARGNCFGSIYMLSWMSSAVVQKTFHKFCKHFATEMYDEHIFLP
TDENGELDRVMGQYEKLGFPGAMGSTDVTHIAWGRCPYNQARSYTGKEGK
PTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVDRIRKDKQYTEK
TFDVYNKDGTTRTLKGCYLIVDNGYHKWRTLIEPSKYPLSVGDLLFSKRL
ESVRKDVECFFGILKIRFRILKLAMTYQEQERIDYVFFTCCILHNMLHTF
DGMDDLEENVNWVSSAELQSTWEHNVDSTSVGTKDVNEKPQIEAGHALLK
RQLTTSYLYRKKIKRDIVW
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mRNA from alignment at P-littoralis_Contig1229:49578..50860-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1229.21.1 ID=mRNA_P-littoralis_Contig1229.21.1|Name=mRNA_P-littoralis_Contig1229.21.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1283bp|location=Sequence derived from alignment at P-littoralis_Contig1229:49578..50860- (Pylaiella littoralis U1_48)
GTGATGGCCTGCCTGACCATACTCGCCAGAGGGAACTGTTTCGGAAGCAT CTACATGCTTTCGTGGATGAGCAGCGCGGTAGTGCAGAAGACGTTCCACA AATTCTGCAAGCACTTCGCGACGGAAATGTACGACGAGCACATCTTCCTC CCGACGGACGAGAACGGCGAGCTTGACCGCGTTATGGGACAGTACGAGAA GCTGGGGTTCCCGGGCGCAATGGGTTCCACTGATGTTACCCATATAGCGT GGGGTAGGTGCCCCTACAACCAAGCCCGCTCGTACACTGGAAAGGAAGGC AAGCCTACCATCGGGTACCAGGTGACGGTCAACCACGCTGGGCGCGTGTT GGCCGTGACAGAGGGGTTCACAGGGTCCACCAACGACAAGACGATCATCT GCTGGGATGCAGCGGTGGACCGGATTCGCAAAGACAAGCAGTACACGGAA AAGACATTTGACGTCTACAACAAGGATGGCACCACGCGAACCCTGAAGGG TTGCTACTTGATCGTTGACAACGGTTACCACAAGGTGAAAAATGTTTGGT ATCACATGGAACGCGATTGTGTTTTTGTCGAATCGCATGGGCATTTTTGG CCGAACAAAAGTTCCTCCCAGTTAGCCGCGCTCAAAATTGTCCCCCAGGT CCTCTTGGGTGCTGTGGACACGATTTTGTGACACTGACTTGCTCCCCATA ATGGTGTTGTTGAAGCTGTGGGGGGATGAAGCAGTTGACAAGTTTACACA GTTCGTTTAGTACCCAATCCTCAAAATGAAACGCGGTACAGAACGAATTA TTAATACTTGATCATTCCAGGTGCACCCTTTTTTTTGTGTTCGTTCGTTC TATTCAGTGGCGGACGCTGATCGAGCCCTCCAAGTACCCGCTGAGCGTAG GCGACTTGCTCTTCTCGAAGAGGCTGGAGAGCGTAAGGAAGGATGTGGAG TGCTTCTTCGGCATTCTGAAGATTCGCTTCAGAATCCTCAAGCTCGCCAT GACCTACCAGGAGCAGGAGCGCATTGACTACGTGTTCTTCACGTGCTGCA TCCTGCACAACATGCTGCATACCTTCGACGGCATGGACGACCTGGAGGAG AACGTCAACTGGGTCAGCAGTGCCGAGCTCCAGAGCACGTGGGAGCACAA CGTGGACTCCACCTCGGTCGGGACCAAGGACGTCAACGAGAAGCCCCAAA TCGAGGCGGGGCACGCGCTGCTCAAGAGGCAGCTGACCACGAGCTACCTG TACCGCAAGAAGATTAAGAGGGATATTGTTTGG
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Coding sequence (CDS) from alignment at P-littoralis_Contig1229:49578..50860-

>mRNA_P-littoralis_Contig1229.21.1 ID=mRNA_P-littoralis_Contig1229.21.1|Name=mRNA_P-littoralis_Contig1229.21.1|organism=Pylaiella littoralis U1_48|type=CDS|length=957bp|location=Sequence derived from alignment at P-littoralis_Contig1229:49578..50860- (Pylaiella littoralis U1_48)
ATGGCCTGCCTGACCATACTCGCCAGAGGGAACTGTTTCGGAAGCATCTA
CATGCTTTCGTGGATGAGCAGCGCGGTAGTGCAGAAGACGTTCCACAAAT
TCTGCAAGCACTTCGCGACGGAAATGTACGACGAGCACATCTTCCTCCCG
ACGGACGAGAACGGCGAGCTTGACCGCGTTATGGGACAGTACGAGAAGCT
GGGGTTCCCGGGCGCAATGGGTTCCACTGATGTTACCCATATAGCGTGGG
GTAGGTGCCCCTACAACCAAGCCCGCTCGTACACTGGAAAGGAAGGCAAG
CCTACCATCGGGTACCAGGTGACGGTCAACCACGCTGGGCGCGTGTTGGC
CGTGACAGAGGGGTTCACAGGGTCCACCAACGACAAGACGATCATCTGCT
GGGATGCAGCGGTGGACCGGATTCGCAAAGACAAGCAGTACACGGAAAAG
ACATTTGACGTCTACAACAAGGATGGCACCACGCGAACCCTGAAGGGTTG
CTACTTGATCGTTGACAACGGTTACCACAAGTGGCGGACGCTGATCGAGC
CCTCCAAGTACCCGCTGAGCGTAGGCGACTTGCTCTTCTCGAAGAGGCTG
GAGAGCGTAAGGAAGGATGTGGAGTGCTTCTTCGGCATTCTGAAGATTCG
CTTCAGAATCCTCAAGCTCGCCATGACCTACCAGGAGCAGGAGCGCATTG
ACTACGTGTTCTTCACGTGCTGCATCCTGCACAACATGCTGCATACCTTC
GACGGCATGGACGACCTGGAGGAGAACGTCAACTGGGTCAGCAGTGCCGA
GCTCCAGAGCACGTGGGAGCACAACGTGGACTCCACCTCGGTCGGGACCA
AGGACGTCAACGAGAAGCCCCAAATCGAGGCGGGGCACGCGCTGCTCAAG
AGGCAGCTGACCACGAGCTACCTGTACCGCAAGAAGATTAAGAGGGATAT
TGTTTGG
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