mRNA_P-littoralis_Contig1227.3.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1227.3.1 vs. uniprot
Match: A0A0A1WMC4_ZEUCU (Putative AC9 transposase n=1 Tax=Zeugodacus cucurbitae TaxID=28588 RepID=A0A0A1WMC4_ZEUCU) HSP 1 Score: 64.7 bits (156), Expect = 1.640e-11 Identity = 29/63 (46.03%), Postives = 44/63 (69.84%), Query Frame = 1
Query: 1 DELNWWCRHQFAFPCLARLAIKYLVIPPSSAASERIFSMADGIVTKNGNRLEDDTMNALVFLN 189
D + WW + +P L++LA K L IP SSAASER+FS+A I+T+ NR+ T+++++FLN
Sbjct: 90 DVMQWWLNNNKRYPRLSKLAEKVLAIPASSAASERVFSLAGNIITEKRNRIAPKTVDSILFLN 152
BLAST of mRNA_P-littoralis_Contig1227.3.1 vs. uniprot
Match: A0A1X7SR93_AMPQE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7SR93_AMPQE) HSP 1 Score: 61.6 bits (148), Expect = 1.590e-10 Identity = 31/63 (49.21%), Postives = 41/63 (65.08%), Query Frame = 1
Query: 1 DELNWWCRHQFAFPCLARLAIKYLVIPPSSAASERIFSMADGIVTKNGNRLEDDTMNALVFLN 189
D WW ++Q FP L+ +A K L IP +S SERIFS+A GIVTK L+ + ++ LVFLN
Sbjct: 67 DVFEWWRKNQEMFPHLSDIARKLLCIPATSVPSERIFSVAGGIVTKKRTNLKPENVDMLVFLN 129
BLAST of mRNA_P-littoralis_Contig1227.3.1 vs. uniprot
Match: A0A667YW07_9TELE (BED-type domain-containing protein n=1 Tax=Myripristis murdjan TaxID=586833 RepID=A0A667YW07_9TELE) HSP 1 Score: 63.9 bits (154), Expect = 2.280e-10 Identity = 30/63 (47.62%), Postives = 43/63 (68.25%), Query Frame = 1
Query: 1 DELNWWCRHQFAFPCLARLAIKYLVIPPSSAASERIFSMADGIVTKNGNRLEDDTMNALVFLN 189
D L WW +H+ +P ++RLA K+L IP +S ASER+FS A V+K +RL D ++ L+FLN
Sbjct: 514 DPLEWWKKHEQQYPIMSRLARKFLCIPATSVASERVFSAAGQAVSKLRSRLLPDNVDKLIFLN 576
BLAST of mRNA_P-littoralis_Contig1227.3.1 vs. uniprot
Match: UPI000CF7E595 (zinc finger BED domain-containing protein 1-like n=1 Tax=Oryzias melastigma TaxID=30732 RepID=UPI000CF7E595) HSP 1 Score: 62.8 bits (151), Expect = 4.510e-10 Identity = 30/62 (48.39%), Postives = 40/62 (64.52%), Query Frame = 1
Query: 1 DELNWWCRHQFAFPCLARLAIKYLVIPPSSAASERIFSMADGIVTKNGNRLEDDTMNALVFL 186
+ L WW H+ AFP L +LA +YL IP +S A+ER+FS A IVT + L D ++ LVFL
Sbjct: 222 NPLKWWSSHEAAFPLLGKLAKRYLCIPGTSVAAERVFSTAGDIVTAQRSNLSPDHVDQLVFL 283
BLAST of mRNA_P-littoralis_Contig1227.3.1 vs. uniprot
Match: A0A2I4AX02_9TELE (zinc finger BED domain-containing protein 1-like n=1 Tax=Austrofundulus limnaeus TaxID=52670 RepID=A0A2I4AX02_9TELE) HSP 1 Score: 62.8 bits (151), Expect = 5.760e-10 Identity = 30/62 (48.39%), Postives = 40/62 (64.52%), Query Frame = 1
Query: 1 DELNWWCRHQFAFPCLARLAIKYLVIPPSSAASERIFSMADGIVTKNGNRLEDDTMNALVFL 186
D L WW H+ FP +++LA KYL IP +S ASER+FS +VT + L+ T+N LVFL
Sbjct: 379 DPLTWWKMHEVNFPLISQLAKKYLCIPATSTASERVFSAGGNVVTCQRSLLKPATVNMLVFL 440
BLAST of mRNA_P-littoralis_Contig1227.3.1 vs. uniprot
Match: UPI00168D7D3B (zinc finger BED domain-containing protein 1 n=1 Tax=Oryzias melastigma TaxID=30732 RepID=UPI00168D7D3B) HSP 1 Score: 62.8 bits (151), Expect = 5.770e-10 Identity = 30/62 (48.39%), Postives = 40/62 (64.52%), Query Frame = 1
Query: 1 DELNWWCRHQFAFPCLARLAIKYLVIPPSSAASERIFSMADGIVTKNGNRLEDDTMNALVFL 186
+ L WW H+ AFP L +LA +YL IP +S A+ER+FS A IVT + L D ++ LVFL
Sbjct: 377 NPLQWWSSHEAAFPLLGKLAKRYLCIPGTSVAAERVFSTAGDIVTAQRSNLSPDHVDQLVFL 438
BLAST of mRNA_P-littoralis_Contig1227.3.1 vs. uniprot
Match: UPI001560B2FC (zinc finger BED domain-containing protein 1-like n=1 Tax=Acipenser ruthenus TaxID=7906 RepID=UPI001560B2FC) HSP 1 Score: 62.8 bits (151), Expect = 5.840e-10 Identity = 33/62 (53.23%), Postives = 39/62 (62.90%), Query Frame = 1
Query: 1 DELNWWCRHQFAFPCLARLAIKYLVIPPSSAASERIFSMADGIVTKNGNRLEDDTMNALVFL 186
D L WW Q FP L +LA KYL IP +SAA ER+FS IVT RL+ DT++ LVFL
Sbjct: 583 DPLIWWKAQQTNFPRLCKLAQKYLCIPATSAACERVFSTCGNIVTCKQTRLKPDTVDKLVFL 644
BLAST of mRNA_P-littoralis_Contig1227.3.1 vs. uniprot
Match: UPI001C05428F (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Melanotaenia boesemani TaxID=1250792 RepID=UPI001C05428F) HSP 1 Score: 60.8 bits (146), Expect = 1.700e-9 Identity = 29/62 (46.77%), Postives = 41/62 (66.13%), Query Frame = 1
Query: 1 DELNWWCRHQFAFPCLARLAIKYLVIPPSSAASERIFSMADGIVTKNGNRLEDDTMNALVFL 186
D L+WW H+ +FP LA+LA +YL IP +S A+ER+FS A IVT + L ++ L+FL
Sbjct: 181 DPLHWWSLHEASFPLLAKLAKRYLCIPGTSVAAERVFSTAGDIVTAQRSNLTPHHVDQLLFL 242
BLAST of mRNA_P-littoralis_Contig1227.3.1 vs. uniprot
Match: UPI001B7EA1F8 (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Polyodon spathula TaxID=7913 RepID=UPI001B7EA1F8) HSP 1 Score: 61.2 bits (147), Expect = 2.050e-9 Identity = 31/62 (50.00%), Postives = 39/62 (62.90%), Query Frame = 1
Query: 1 DELNWWCRHQFAFPCLARLAIKYLVIPPSSAASERIFSMADGIVTKNGNRLEDDTMNALVFL 186
D L WW Q FP L +LA KYL IP +S+ASER+FS +VT RL+ D ++ LVFL
Sbjct: 732 DPLIWWKAQQANFPRLCKLAQKYLCIPATSSASERVFSTCGSVVTCKQTRLKPDAVDRLVFL 793
BLAST of mRNA_P-littoralis_Contig1227.3.1 vs. uniprot
Match: A0A1S3D3P9_DIACI (zinc finger BED domain-containing protein 1 n=1 Tax=Diaphorina citri TaxID=121845 RepID=A0A1S3D3P9_DIACI) HSP 1 Score: 60.8 bits (146), Expect = 2.780e-9 Identity = 31/62 (50.00%), Postives = 38/62 (61.29%), Query Frame = 1
Query: 1 DELNWWCRHQFAFPCLARLAIKYLVIPPSSAASERIFSMADGIVTKNGNRLEDDTMNALVFL 186
D WW + FP +ARLA KYL IP +SAA+ER+FS A VT N L + +N LVFL
Sbjct: 536 DLYEWWHHREKKFPAVARLAKKYLTIPATSAAAERVFSSAGNTVTAKRNCLLPENVNMLVFL 597 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1227.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1227.3.1 >prot_P-littoralis_Contig1227.3.1 ID=prot_P-littoralis_Contig1227.3.1|Name=mRNA_P-littoralis_Contig1227.3.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=63bp DELNWWCRHQFAFPCLARLAIKYLVIPPSSAASERIFSMADGIVTKNGNRback to top mRNA from alignment at P-littoralis_Contig1227:43027..43215- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1227.3.1 ID=mRNA_P-littoralis_Contig1227.3.1|Name=mRNA_P-littoralis_Contig1227.3.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=189bp|location=Sequence derived from alignment at P-littoralis_Contig1227:43027..43215- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1227:43027..43215- >mRNA_P-littoralis_Contig1227.3.1 ID=mRNA_P-littoralis_Contig1227.3.1|Name=mRNA_P-littoralis_Contig1227.3.1|organism=Pylaiella littoralis U1_48|type=CDS|length=189bp|location=Sequence derived from alignment at P-littoralis_Contig1227:43027..43215- (Pylaiella littoralis U1_48)back to top |