mRNA_P-littoralis_Contig1225.9.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1225.9.1 vs. uniprot
Match: A0A6H5JIS8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIS8_9PHAE) HSP 1 Score: 213 bits (542), Expect = 5.900e-55 Identity = 103/213 (48.36%), Postives = 144/213 (67.61%), Query Frame = 3
Query: 1362 FGWNESPLCYHALSEAKATYLRSRGVPVLACIDDAWFANFSSTFGCSDEVQWMAAAEALRLGMLISFFCRHFLSDTKCDLKPSRIQRYLGILCDSSTTSFRIPEDKLSKLREIIREVLARGSLSGKTLETIAGKCVSMSVAIRPASLWTHYMFAAIAKAKGKVIQLHD-----HADLRAELAKWFTLSSTAQEGPWYKVRHFATEVTLAASDA 1985
FG + SP YH LSEAKA +LRS G+P LA +DD++ N T G QW+AA EA + +L+S+FC +FLS KCD +P+ +Q+YLG+LCDS+T +FR+P+DKL + +I++E LA G++S +TL+ +AGK SM+VAIRPASL+T MFAA+A + ++ D ADL E+ KW +++T EGPW RHF +T ASDA
Sbjct: 190 FGLSISPFVYHTLSEAKAAFLRSLGIPALAYLDDSFLTNLEGTQGQPAREQWLAACEATHISVLVSYFCGNFLSPKKCDWRPTTVQKYLGMLCDSATATFRVPQDKLDAVHDILKESLAAGNISFRTLQRVAGKVTSMTVAIRPASLYTQAMFAALAALERSTLRSVDLTKDSGADLVGEMRKWLDITATTHEGPWQLARHFTAALTKGASDA 402
BLAST of mRNA_P-littoralis_Contig1225.9.1 vs. uniprot
Match: A0A6H5KRN9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRN9_9PHAE) HSP 1 Score: 209 bits (533), Expect = 6.780e-54 Identity = 105/213 (49.30%), Postives = 145/213 (68.08%), Query Frame = 3
Query: 1362 FGWNESPLCYHALSEAKATYLRSRGVPVLACIDDAWFANFSSTFGCSDEVQWMAAAEALRLGMLISFFCRHFLSDTKCDLKPSRIQRYLGILCDSSTTSFRIPEDKLSKLREIIREVLARGSLSGKTLETIAGKCVSMSVAIRPASLWTHYMFAAIA---KAKGKVIQL--HDHADLRAELAKWFTLSSTAQEGPWYKVRHFATEVTLAASDA 1985
FG++ SP YH LSEAKA + RS+G P LA +DD+W +NF +T+G + QW+AA EA + ML S FC FLS KC+L+P +YLGI+CDS T +FRIP++KL KL ++R LA GS+S +TL+ +AGKC+SM+VAIRPASLWTH MFA ++ K + + L +ADLR E KW +L++++ EGPW + H + +SDA
Sbjct: 284 FGFSLSPYVYHTLSEAKAAFQRSKGAPSLAYLDDSWRSNFLATYGRPAQDQWLAAGEATHVAMLTSLFCGQFLSLKKCELRPVTAIQYLGIICDSETMTFRIPQEKLDKLHGLLRTALADGSVSYRTLQRVAGKCMSMTVAIRPASLWTHAMFAVLSAMDKTNQRQVDLARDAYADLRQEFQKWLSLTASSHEGPWQRASHLIVTID-GSSDA 495
BLAST of mRNA_P-littoralis_Contig1225.9.1 vs. uniprot
Match: A0A6H5KPA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPA3_9PHAE) HSP 1 Score: 155 bits (393), Expect = 8.740e-37 Identity = 80/157 (50.96%), Postives = 101/157 (64.33%), Query Frame = 3
Query: 1530 EALRLGMLISFFCRHFLSDTKCDLKPSRIQRYLGILCDSSTTSFRIPEDKLSKLREIIREVLARGSLSGKTLETIAGKCVSMSVAIRPASLWTHYMFAAI-----AKAKGKVIQLHDHADLRAELAKWFTLSSTAQEGPWYKVRHFATEVTLAASDA 1985
EA GML+SF CR FLS KCDL+P+ +Q+YLGILCDS SF IP+ +L KL +IR L G LS +TL+ IAG+C+SM+V IRPA LWTH +F AI + G ++ ADLR EL W ++ST EGPW + RHF +T A DA
Sbjct: 189 EATHRGMLVSFLCRRFLSLHKCDLRPTTVQQYLGILCDSGMASFHIPQKQLDKLHALIRAALDDGWLSFRTLQRIAGECMSMTVPIRPAPLWTHALFQAIMATDESGVSGVHLRRDKDADLRGELRHWLGVASTTHEGPWQRARHFKAALTGGAPDA 345
BLAST of mRNA_P-littoralis_Contig1225.9.1 vs. uniprot
Match: A0A6H5KLE3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLE3_9PHAE) HSP 1 Score: 141 bits (356), Expect = 1.470e-31 Identity = 77/217 (35.48%), Postives = 121/217 (55.76%), Query Frame = 3
Query: 1356 VSFGWNESPLCYHALSEAKATYLRSRGVPVLACIDDAWFANFSSTFGCSDEVQWMAAAEALRLGMLISFFCRHFLSDTKCDLKPSRIQRYLGILCDSSTTSFRIPEDKLSKLREIIREVLARGSLSGKTLETIAGKCVSMSVAIRPASLWTHYMFAAIA-------KAKGKVIQLHDHADLRAELAKWFTLSSTAQEGPWYKVRHFATEVTLAASDA 1985
++FGW +P Y +LSEA A YLR+R +PVL IDD + NF ST S + Q+ AA A + + + + +FLS K +L P+ +LGI+CD+ F +PEDKL+KL I+ + ++ +S + LE + GKCVS+SVA+ A+L+TH+M+ ++ + I + + L E+ +W + WY+ H +T ASDA
Sbjct: 196 LAFGWCSAPFIYSSLSEAVARYLRARDIPVLTWIDDFYLTNFRSTRMLSSKEQFQAALTAAYVALEVFYRAGYFLSIKKSELSPTTCLVFLGIICDAERGRFEVPEDKLAKLDAILTDAISSQVISFQMLEKLVGKCVSLSVAVPVAALYTHHMYKSLTVYQRTGGRRPNMDIDISPNGGLMFEMQRWLEVRKKFNGASWYRAEHKLLSLT-GASDA 411
BLAST of mRNA_P-littoralis_Contig1225.9.1 vs. uniprot
Match: UPI001CF3D4FA (uncharacterized protein LOC122964315 n=2 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF3D4FA) HSP 1 Score: 105 bits (261), Expect = 1.110e-19 Identity = 74/214 (34.58%), Postives = 98/214 (45.79%), Query Frame = 3
Query: 1362 FGWNESPLCYHALSEAKATYLRSRGVPVLACIDDAWFANFS--------STFGCSDEVQWMAAAEALRLGMLISFFCRHFLSDTKCDLKPSRIQRYLGILCDSSTTSFRIPEDKLSKLREIIREVLARGSLSGKTLETIAGKCVSMSVAIRPASLWTHYMFAAIAKAKGKVIQLHDHADLRAELAKWFTLSSTAQEGPWYKVRHFATEVTLAAS 1979
FGW SP YH+ + +LRS GVP L IDD +T DE AA A+ L +FL +K L P ++ YLG DSS+ +FR+ K K +IRE L +S KTL+ + GKC+S S+AI A L+T M AAI+ + LR E+A W L PW + RH E+ AS
Sbjct: 349 FGWKISPYVYHSTGLIASNFLRSLGVPSLLYIDDRHNGQLQVSLDKGQYNTLDFIDERNLAAAKSAVFLVAFHLTRLGYFLGLSKSILVPHKMVPYLGFFIDSSSEAFRLIPQKKQKFIGLIRETLNSRYVSVKTLQRLVGKCISFSLAIPAARLFTREMSAAISMCMRTSKPIAVQGALRDEIAHWLFLEEWDDPLPWREERHLQIELATDAS 562
BLAST of mRNA_P-littoralis_Contig1225.9.1 vs. uniprot
Match: A0A6H5KFM1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFM1_9PHAE) HSP 1 Score: 94.0 bits (232), Expect = 2.190e-19 Identity = 45/94 (47.87%), Postives = 65/94 (69.15%), Query Frame = 3
Query: 1548 MLISFFCRHFLSDTKCDLKPSRIQRYLGILCDSSTTSFRIPEDKLSKLREIIREVLARGSLSGKTLETIAGKCVSMSVAIRPASLWTHYMFAAI 1829
MLIS F FLS KC++ P +YLGI+CD T +F+I ++ L K + ++ LA G +S +TL+ +AGK ++M+VAIRPAS+WTH MFA +
Sbjct: 1 MLISLFRGQFLSLKKCEILPVTALQYLGIICDPETMTFQITQESLDKPHDFLQTALADGCVSYRTLQRVAGKYMNMTVAIRPASVWTHAMFAVL 94
BLAST of mRNA_P-littoralis_Contig1225.9.1 vs. uniprot
Match: A0A8B6GZ99_MYTGA (Reverse transcriptase domain-containing protein n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6GZ99_MYTGA) HSP 1 Score: 87.8 bits (216), Expect = 1.280e-14 Identity = 62/209 (29.67%), Postives = 103/209 (49.28%), Query Frame = 3
Query: 1362 FGWNESPLCYHALSEAKATYLRSRGVPVLACIDDAWFANFSSTFGCSDEVQWMAAAEALRLGMLISFFCRHFLSDTKCDLKPSRIQRYLGILCDSSTTSFRIPEDKLSKLREIIREVLARGSLSGKTLETIAGKCVSMSVAIRPASLWTHYMFAAIAKA-KGKVIQLHDHADLRAELAKWFTLSSTAQEGPWYKVRHFATEVTLAASDA 1985
FGW S YH L+ ++LR + + L IDD +F+ + + M + A++ + + +FL+ K L P++ +LG++ DS SF I + + K + +L + + L+ G C+S+S+AI A L+T AI+KA KG +I + D DLR EL W + + + PW RH ++L +SDA
Sbjct: 162 FGWKNSAYVYHNLNLQAISFLRKKSISCLLYIDDRLIESFNGYIEPRLDNELMRSNIAIKYSVKLFVNLGYFLNIDKSVLIPTQSIVFLGMIIDSVKASFFITKKRKEKFCALRESILKKSTCPITILQKFVGICISLSLAIPGAKLYTSTCNRAISKAIKGPMIIIIDE-DLRKELQYWSFIDNWTKPFPWVNERHNVLSLSL-SSDA 368
BLAST of mRNA_P-littoralis_Contig1225.9.1 vs. uniprot
Match: UPI0016045BCF (uncharacterized protein LOC118418123 n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI0016045BCF) HSP 1 Score: 83.6 bits (205), Expect = 5.720e-13 Identity = 65/212 (30.66%), Postives = 99/212 (46.70%), Query Frame = 3
Query: 1356 VSFGWNESPLCYHALSEAKATYLRSRGVPVLACIDDAWFANFSSTF-GCSDEVQWMAAAEALRLGMLISFFCR--HFLSDTKCDLKPSRIQRYLGILCDSSTTSFRIPEDKLSKLREIIREVLARGSLSGKTLETIAGKCVSMSVAIRPASLWTHYMFAAIAKAKGKVIQLHDHADLRAELAKWFTLSSTAQEGPWYKVRHFATEVTLAASD 1982
+ FG+ S Y A +Y+RS GVP IDD A + SD + AA A + +L R +FL K L P++I +LG C+S +F +P DK S+ E+ +LA+ +++ KT++ AGKCVS + + A L+ AIA+A + LR E+ +W L W RH + ++ ASD
Sbjct: 244 IPFGFRTSAFLYQATGMVATSYVRSLGVPTSQYIDDRLAAELLARLRNKSDRDSHLDAANAA-IFILCQILIRLGYFLGLGKSILIPTQIIIHLGYGCNSLLRAFFLPVDKKSRFIELREYILAQETVTIKTMQKWAGKCVSFQLVVPAAKLFARVAHRAIAEALRAQGTIRISGKLREEIEEWRFLDKWEGCMHWRDERHVSVTMSTDASD 454
BLAST of mRNA_P-littoralis_Contig1225.9.1 vs. uniprot
Match: A0A7D9HDB6_PARCT (LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HDB6_PARCT) HSP 1 Score: 82.0 bits (201), Expect = 1.680e-12 Identity = 64/234 (27.35%), Postives = 95/234 (40.60%), Query Frame = 3
Query: 1302 VGRFSAYRTVVSTSGVRRVSFGWNESPLCYHALSEAKATYLRSRGVPVLACIDDAWFANFSSTFGCS--------DEVQWMAAAEALRLGMLISFFCRHFLSDTKCDLKPSRIQRYLGILCDSSTTSFRIPEDKLSKLREIIREVLARGSLSGKTLETIAGKCVSMSVAIRPASLWTHYMFAAIAKAKGKVIQLHDHADLRAELAKWFTLSSTAQEGPWYKVRHFATEVTLAAS 1979
VG + Y T+ FGW SP YH + S + IDD S DE AA A+ + +FL K L P ++ +LG L DS+ F + K K ++R+++ + ++S KT++ + GKCVS S+A+ A L+T M AI+K ++ LR EL WF L + PW H + AS
Sbjct: 236 VGWYLVYNTL---------PFGWKISPFVYHTTGLLATNFFHSIAISCSLYIDDHHNGQLQVDLHSSAYFQLPTLDERNLAAANSAIFIVAYYLVQLGYFLGLAKSTLIPVKVVPFLGFLSDSALQVFHLIPAKKEKFLLLLRKIVGQSAVSVKTIQRLVGKCVSFSLAVPGAVLFTRAMNTAISKGLRTHRRVKIDQKLRDELNHWFFLETWDDPLPWRDELHIRISLATDAS 460
BLAST of mRNA_P-littoralis_Contig1225.9.1 vs. uniprot
Match: UPI00077ABC6F (uncharacterized protein LOC107348821 n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077ABC6F) HSP 1 Score: 78.2 bits (191), Expect = 1.200e-11 Identity = 63/201 (31.34%), Postives = 88/201 (43.78%), Query Frame = 3
Query: 1416 TYLRSRGVPVLACIDDAWFANFS------------STFGCSDEVQWMAAAEALRLGMLISFFCRHFLSDTKCDLKPSRIQRYLGILCDSSTTSFRIPEDKLSKLREIIREVLARGSLSGKTLETIAGKCVSMSVAIRPASLWTHYMFAAIAKAKGKVIQLHDHADLRAELAKWFTLSSTAQEGPWYKVRHFATEVTLAASD 1982
+Y+RS GVP IDD + S F +D ++AAA + LG +F K L P I ++LG L +S +F + EDK K + +L + S S KTL+ +A K S S+A+ A L+ +F A A K V + H+ LR E+ W L S P RH E ASD
Sbjct: 199 SYIRSLGVPCSQDIDDRHVGQLTTCRKSPKSTTTWSDFELADAAAFIAAAVLISLG--------YFTGLAKSSLLPKCIVKFLGFLVESQRCAFILLEDKKRKFAALRESILDKKSSSIKTLQRLAEKITSFSIAVPAAQLYCRDIFKATAGYKKSVWPVKIHSLLREEIEHWRFLDSWEGTLPCPSKRHIVLENLSDASD 391 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1225.9.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1225.9.1 >prot_P-littoralis_Contig1225.9.1 ID=prot_P-littoralis_Contig1225.9.1|Name=mRNA_P-littoralis_Contig1225.9.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=156bp MAAAEALRLGMLISFFCRHFLSDTKCDLKPSRIQRYLGILCDSSTTSFRIback to top mRNA from alignment at P-littoralis_Contig1225:10892..13096- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1225.9.1 ID=mRNA_P-littoralis_Contig1225.9.1|Name=mRNA_P-littoralis_Contig1225.9.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2205bp|location=Sequence derived from alignment at P-littoralis_Contig1225:10892..13096- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1225:10892..13096- >mRNA_P-littoralis_Contig1225.9.1 ID=mRNA_P-littoralis_Contig1225.9.1|Name=mRNA_P-littoralis_Contig1225.9.1|organism=Pylaiella littoralis U1_48|type=CDS|length=468bp|location=Sequence derived from alignment at P-littoralis_Contig1225:10892..13096- (Pylaiella littoralis U1_48)back to top |