mRNA_P-littoralis_Contig1225.19.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1225.19.1 vs. uniprot
Match: A0A6H5KJT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJT6_9PHAE) HSP 1 Score: 72.8 bits (177), Expect = 4.440e-12 Identity = 44/133 (33.08%), Postives = 72/133 (54.14%), Query Frame = 1
Query: 193 KQLRVRFASVLDYAGREWGRRRRERCCA--------CPLAALSLLARLYAGVDTTSCQAERNFSALNQVLCDRRAGILPHKIEKMLLLRLNRHLIPGFATVTEKLGALKAKCDVQAAVSVAAQSAREGTVVEI 567
+Q+ V +VL + W RR + C+ + L+ +ARL+ G++ +SCQAERNFSAL+ ++ R +L K+E+M+L+RLNRHL+ + + +AK A SVA Q R +++
Sbjct: 139 EQVEVDDFNVLGF----WNRRGTDSVCSTTGNVTSPAEMPYLAFIARLFLGIEASSCQAERNFSALSHLIGHLRCNMLSRKVERMMLIRLNRHLVDEVRELDAAVSLARAKAAKSAQKSVACQEERANKSIDL 267
BLAST of mRNA_P-littoralis_Contig1225.19.1 vs. uniprot
Match: A0A6H5JTB8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTB8_9PHAE) HSP 1 Score: 72.8 bits (177), Expect = 1.310e-11 Identity = 49/132 (37.12%), Postives = 69/132 (52.27%), Query Frame = 1
Query: 196 QLRVRFASVLDYAGREWGRRRRERCCA--------CPLAALSLLARLYAGVDTTSCQAERNFSALNQVLCDRRAGILPHKIEKMLLLRLNRHLIPGFATVTEKLGALKAKCDVQAAVSVAAQSAREGTVVEI 567
QL V +VL Y W RR + A + L+ +ARLY G++ TSCQAERNFSAL ++ R +LP K+E+M+ +RLNRHL+ + + KA A S+AAQ R V++
Sbjct: 522 QLDVDGFNVLGY----WNRRGTDSVSATTGKVTSPAEMPYLAFIARLYLGIEATSCQAERNFSALAHLIGQLRCNMLPSKVERMMFIRLNRHLVAEVRELDAAVVKAKAAKTKVAQSSMAAQEERANQTVDL 649
BLAST of mRNA_P-littoralis_Contig1225.19.1 vs. uniprot
Match: A0A6H5JRT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRT6_9PHAE) HSP 1 Score: 72.8 bits (177), Expect = 1.380e-11 Identity = 44/133 (33.08%), Postives = 72/133 (54.14%), Query Frame = 1
Query: 193 KQLRVRFASVLDYAGREWGRRRRERCCA--------CPLAALSLLARLYAGVDTTSCQAERNFSALNQVLCDRRAGILPHKIEKMLLLRLNRHLIPGFATVTEKLGALKAKCDVQAAVSVAAQSAREGTVVEI 567
+Q+ V +VL + W RR + C+ + L+ +ARL+ G++ +SCQAERNFSAL+ ++ R +L K+E+M+L+RLNRHL+ + + +AK A SVA Q R +++
Sbjct: 704 EQVEVDDFNVLGF----WNRRGTDSVCSTTGNVTSPAEMPYLAFIARLFLGIEASSCQAERNFSALSHLIGHLRCNMLSRKVERMMLIRLNRHLVDEVRELDAAVSLARAKAAKSAQKSVACQEERANKSIDL 832
BLAST of mRNA_P-littoralis_Contig1225.19.1 vs. uniprot
Match: A0A6H5JGG8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGG8_9PHAE) HSP 1 Score: 72.8 bits (177), Expect = 1.380e-11 Identity = 49/132 (37.12%), Postives = 69/132 (52.27%), Query Frame = 1
Query: 196 QLRVRFASVLDYAGREWGRRRRERCCA--------CPLAALSLLARLYAGVDTTSCQAERNFSALNQVLCDRRAGILPHKIEKMLLLRLNRHLIPGFATVTEKLGALKAKCDVQAAVSVAAQSAREGTVVEI 567
QL V +VL Y W RR + A + L+ +ARLY G++ TSCQAERNFSAL ++ R +LP K+E+M+ +RLNRHL+ + + KA A S+AAQ R V++
Sbjct: 717 QLDVDGFNVLGY----WNRRGTDSVSATTGKVTSPAEMPYLAFIARLYLGIEATSCQAERNFSALAHLIGQLRCNMLPSKVERMMFIRLNRHLVAEVRELDAAVVKAKAAKTKVAQSSMAAQEERANQTVDL 844
BLAST of mRNA_P-littoralis_Contig1225.19.1 vs. uniprot
Match: A0A6H5JXV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXV5_9PHAE) HSP 1 Score: 71.2 bits (173), Expect = 4.250e-11 Identity = 36/92 (39.13%), Postives = 56/92 (60.87%), Query Frame = 1
Query: 292 LSLLARLYAGVDTTSCQAERNFSALNQVLCDRRAGILPHKIEKMLLLRLNRHLIPGFATVTEKLGALKAKCDVQAAVSVAAQSAREGTVVEI 567
L+ +ARL+ G++ TSCQAERNFSAL ++ + R +LPH++E+M+L+RLNR ++ + + AA S AAQ R ++I
Sbjct: 450 LAFIARLHLGIEATSCQAERNFSALAHLIGNLRCNMLPHRVERMMLIRLNRRMLDEVRAFDAAVSRAREMATKNAAKSAAAQEERANKPIDI 541
BLAST of mRNA_P-littoralis_Contig1225.19.1 vs. uniprot
Match: A0A6H5KAS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAS2_9PHAE) HSP 1 Score: 70.9 bits (172), Expect = 5.280e-11 Identity = 38/92 (41.30%), Postives = 54/92 (58.70%), Query Frame = 1
Query: 292 LSLLARLYAGVDTTSCQAERNFSALNQVLCDRRAGILPHKIEKMLLLRLNRHLIPGFATVTEKLGALKAKCDVQAAVSVAAQSAREGTVVEI 567
L+ +ARLY G++ TSCQAERNFSA + ++ R ILP K E+ + +RLNRHL+ + + KA A S+AAQ R V++
Sbjct: 347 LAFIARLYLGIEATSCQAERNFSARSHLIGQLRCKILPSKFERTMFIRLNRHLVAEVRELDAAVAQAKATATKTAQSSMAAQGERANQTVDL 438
BLAST of mRNA_P-littoralis_Contig1225.19.1 vs. uniprot
Match: A0A6H5KAN7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAN7_9PHAE) HSP 1 Score: 70.1 bits (170), Expect = 1.040e-10 Identity = 48/126 (38.10%), Postives = 76/126 (60.32%), Query Frame = 1
Query: 217 SVLDYAGREWGRRRRERCCACP------LAALSLLARLYAGVDTTSCQAERNFSALNQVLCDRRAGILPHKIEKMLLLRLNRHLIPGFATVTEKLGALKA---KCDVQAAVSVAAQSAREGTVVEI 567
S+L++ W RR + R CA L L+L+ARL+ G+++TSCQAERNFSAL ++ R+ +LP K+E+++ LRLNR IP + + + A KA +C + A V A++A + V+ +
Sbjct: 387 SLLEF----WQRRSKPRTCAETGEVEPGLPHLALIARLFHGIESTSCQAERNFSALAFLIGSLRSSMLPGKVERLMFLRLNRLYIPEVKALHDAVEANKAAAARCQEKVA-QVEAEAAGDAVVLTL 507
BLAST of mRNA_P-littoralis_Contig1225.19.1 vs. uniprot
Match: A0A6H5KJ52_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ52_9PHAE) HSP 1 Score: 70.1 bits (170), Expect = 1.170e-10 Identity = 48/126 (38.10%), Postives = 76/126 (60.32%), Query Frame = 1
Query: 217 SVLDYAGREWGRRRRERCCACP------LAALSLLARLYAGVDTTSCQAERNFSALNQVLCDRRAGILPHKIEKMLLLRLNRHLIPGFATVTEKLGALKA---KCDVQAAVSVAAQSAREGTVVEI 567
S+L++ W RR + R CA L L+L+ARL+ G+++TSCQAERNFSAL ++ R+ +LP K+E+++ LRLNR IP + + + A KA +C + A V A++A + V+ +
Sbjct: 715 SLLEF----WQRRSKPRTCAETGEVEPGLPHLALIARLFHGIESTSCQAERNFSALAFLIGSLRSSMLPGKVERLMFLRLNRLYIPEVKALHDAVEANKAAAARCQEKVA-QVEAEAAGDAVVLTL 835
BLAST of mRNA_P-littoralis_Contig1225.19.1 vs. uniprot
Match: A0A6H5JQI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQI6_9PHAE) HSP 1 Score: 68.9 bits (167), Expect = 2.780e-10 Identity = 35/92 (38.04%), Postives = 55/92 (59.78%), Query Frame = 1
Query: 292 LSLLARLYAGVDTTSCQAERNFSALNQVLCDRRAGILPHKIEKMLLLRLNRHLIPGFATVTEKLGALKAKCDVQAAVSVAAQSAREGTVVEI 567
L+ +ARL+ G++ TSCQAERNFSAL ++ D +L H++E+M+L+RLN+HL+ + +A A S AQ R T +++
Sbjct: 554 LAFIARLHLGIEATSCQAERNFSALAHLIGDLCCNMLSHRVERMMLVRLNKHLLAEVRAYDAAVAWARAMAANSAEKSAVAQEERANTAIDV 645
BLAST of mRNA_P-littoralis_Contig1225.19.1 vs. uniprot
Match: A0A6H5KDJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDJ6_9PHAE) HSP 1 Score: 66.6 bits (161), Expect = 1.650e-9 Identity = 40/91 (43.96%), Postives = 60/91 (65.93%), Query Frame = 1
Query: 292 LSLLARLYAGVDTTSCQAERNFSALNQVLCDRRAGILPHKIEKMLLLRLNRHLIPGFATVTEKLGALKAKCDVQAAVSVAAQSAREGTVVE 564
L+ +ARL+ G++ TSCQAERNFSAL ++ R +L K+E+M+L+RLNRHL+ ++ AL A V A ++AA+SARE + +
Sbjct: 436 LAFIARLHLGIEATSCQAERNFSALAHLIGTLRCNMLARKVERMMLIRLNRHLLA-------EVRALDAA--VAQARAMAAKSARESGIAQ 517 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1225.19.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1225.19.1 >prot_P-littoralis_Contig1225.19.1 ID=prot_P-littoralis_Contig1225.19.1|Name=mRNA_P-littoralis_Contig1225.19.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=190bp GGGFGGGWCRVALADHTHAFQDGETQSETRQRGRPSTRRCGCARESGSRSback to top mRNA from alignment at P-littoralis_Contig1225:48612..49181- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1225.19.1 ID=mRNA_P-littoralis_Contig1225.19.1|Name=mRNA_P-littoralis_Contig1225.19.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=570bp|location=Sequence derived from alignment at P-littoralis_Contig1225:48612..49181- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1225:48612..49181- >mRNA_P-littoralis_Contig1225.19.1 ID=mRNA_P-littoralis_Contig1225.19.1|Name=mRNA_P-littoralis_Contig1225.19.1|organism=Pylaiella littoralis U1_48|type=CDS|length=570bp|location=Sequence derived from alignment at P-littoralis_Contig1225:48612..49181- (Pylaiella littoralis U1_48)back to top |