mRNA_P-littoralis_Contig1224.8.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1224.8.1 vs. uniprot
Match: A0A6H5KH61_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH61_9PHAE) HSP 1 Score: 147 bits (372), Expect = 3.520e-42 Identity = 68/117 (58.12%), Postives = 88/117 (75.21%), Query Frame = 1
Query: 139 MAELPTPDADG*VGGNSQACHAQFIEFVEADSSSRDSESDLYRAFAFEIASQVGGRYCRHVEEPPALEDMSLAKKKKAAANHPGLCGVHHAAVIAGVKTQDVVDKWGTTTANKYRNQ 489
M +LPTPD + VGGN QAC+ Q ++ + A + ++ +D+ RAFAFE+ S+VG RYC H+ P LEDMS AK+KKAAA+HPGLCGV+HA +IA V+TQDV +KW TT NKYRNQ
Sbjct: 1 MEDLPTPDIEAYVGGNQQACYVQLVDVLSALPAGEEN-TDVGRAFAFEVPSKVGARYCSHLSAPEPLEDMSHAKRKKAAADHPGLCGVYHAHIIAAVRTQDVAEKWNQTTGNKYRNQ 116
BLAST of mRNA_P-littoralis_Contig1224.8.1 vs. uniprot
Match: A0A6H5JXX9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXX9_9PHAE) HSP 1 Score: 133 bits (334), Expect = 2.130e-36 Identity = 59/115 (51.30%), Postives = 79/115 (68.70%), Query Frame = 1
Query: 145 ELPTPDADG*VGGNSQACHAQFIEFVEADSSSRDSESDLYRAFAFEIASQVGGRYCRHVEEPPALEDMSLAKKKKAAANHPGLCGVHHAAVIAGVKTQDVVDKWGTTTANKYRNQ 489
++PTPD +G GN+ ACH Q + + A++ + + S L RAFAFE+A++VG YC H P + M+LA KKAAA HPGLCGVHHA +IA V+T+DV + G T ANK+RNQ
Sbjct: 2 DMPTPDVEGYKAGNTMACHGQRVSLIAANTPAEEGTSTLLRAFAFEVAAKVGAEYCHHDTAPEPMPSMALAAAKKAAAEHPGLCGVHHAHIIAAVRTEDVTSRSGFTAANKFRNQ 116
BLAST of mRNA_P-littoralis_Contig1224.8.1 vs. uniprot
Match: A0A6H5KUP8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUP8_9PHAE) HSP 1 Score: 132 bits (331), Expect = 3.020e-36 Identity = 58/114 (50.88%), Postives = 79/114 (69.30%), Query Frame = 1
Query: 148 LPTPDADG*VGGNSQACHAQFIEFVEADSSSRDSESDLYRAFAFEIASQVGGRYCRHVEEPPALEDMSLAKKKKAAANHPGLCGVHHAAVIAGVKTQDVVDKWGTTTANKYRNQ 489
+PTPD +G GN+ ACH Q + + A++ + + S L RAFAFE+A++VG YC H P + M+LA KKAAA HPGLCGV+HA +IA V+T+DV + G+T ANK+RNQ
Sbjct: 1 MPTPDVEGCKAGNTMACHEQMVSLIAANTPAEEDTSTLVRAFAFEVAAKVGAEYCHHDTAPEPMPSMALAAAKKAAAEHPGLCGVYHAHIIAAVRTEDVTSRSGSTAANKFRNQ 114
BLAST of mRNA_P-littoralis_Contig1224.8.1 vs. uniprot
Match: A0A6H5K6B0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6B0_9PHAE) HSP 1 Score: 128 bits (321), Expect = 6.590e-34 Identity = 58/125 (46.40%), Postives = 81/125 (64.80%), Query Frame = 1
Query: 115 TNQYKLKQMAELPTPDADG*VGGNSQACHAQFIEFVEADSSSRDSESDLYRAFAFEIASQVGGRYCRHVEEPPALEDMSLAKKKKAAANHPGLCGVHHAAVIAGVKTQDVVDKWGTTTANKYRNQ 489
+ Q K +P P+ +G GN+ ACH Q + + A++ + + S L RAFAFE+A++VG YC H P + M+LA KKAAA HPGLCGV+HA +IA V+T+DV + G+T ANK+RNQ
Sbjct: 59 STQKPPKLWTYMPPPNVEGCKAGNTMACHEQMVSLIAANTPAEEDTSTLVRAFAFEVAAKVGAEYCHHDTAPEPMPSMALAAAKKAAAEHPGLCGVYHAHIIAAVRTEDVTSQSGSTAANKFRNQ 183
BLAST of mRNA_P-littoralis_Contig1224.8.1 vs. uniprot
Match: A0A6H5JH50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH50_9PHAE) HSP 1 Score: 122 bits (305), Expect = 2.280e-31 Identity = 55/82 (67.07%), Postives = 66/82 (80.49%), Query Frame = 1
Query: 244 DSESDLYRAFAFEIASQVGGRYCRHVEEPPALEDMSLAKKKKAAANHPGLCGVHHAAVIAGVKTQDVVDKWGTTTANKYRNQ 489
+ +D+ RAFAFE+AS+VG RYC HV P LEDMS AK+KKAAA+HPGLCGV+HA +IA V+TQDV +KW TT NKYRNQ
Sbjct: 104 EENTDVGRAFAFEVASKVGARYCSHVSAPEPLEDMSHAKRKKAAADHPGLCGVYHAHIIAAVRTQDVAEKWNQTTGNKYRNQ 185
BLAST of mRNA_P-littoralis_Contig1224.8.1 vs. uniprot
Match: A0A6H5KQB2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB2_9PHAE) HSP 1 Score: 109 bits (273), Expect = 2.630e-27 Identity = 54/115 (46.96%), Postives = 70/115 (60.87%), Query Frame = 1
Query: 145 ELPTPDADG*VGGNSQACHAQFIEFVEADSSSRDSESDLYRAFAFEIASQVGGRYCRHVEEPPALEDMSLAKKKKAAANHPGLCGVHHAAVIAGVKTQDVVDKWGTTTANKYRNQ 489
ELP PD + GN++ S + ++L RAFAFEIA+ VGG YC H+ EP + M+ + K AAA HPGLCGV+HA ++A VKTQDV + G+T NKYRNQ
Sbjct: 2 ELPAPDVEAYKAGNTRPATIMVSLIANNPPSEDGTNNNLARAFAFEIAAAVGGEYCDHLTEPEPMPSMAPSAAKVAAAEHPGLCGVYHAHILAAVKTQDVQARSGSTAGNKYRNQ 116
BLAST of mRNA_P-littoralis_Contig1224.8.1 vs. uniprot
Match: A0A6H5JAI4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAI4_9PHAE) HSP 1 Score: 70.1 bits (170), Expect = 1.140e-12 Identity = 31/51 (60.78%), Postives = 40/51 (78.43%), Query Frame = 1
Query: 337 LEDMSLAKKKKAAANHPGLCGVHHAAVIAGVKTQDVVDKWGTTTANKYRNQ 489
+ M+LA KKAAA HPGLCGV+HA +IA V+T+DV + G+T ANK+RNQ
Sbjct: 1 MPSMALAAAKKAAAEHPGLCGVYHAHIIAAVRTEDVTSRSGSTAANKFRNQ 51
BLAST of mRNA_P-littoralis_Contig1224.8.1 vs. uniprot
Match: A0A6H5KUN4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUN4_9PHAE) HSP 1 Score: 66.6 bits (161), Expect = 1.170e-11 Identity = 31/51 (60.78%), Postives = 39/51 (76.47%), Query Frame = 1
Query: 337 LEDMSLAKKKKAAANHPGLCGVHHAAVIAGVKTQDVVDKWGTTTANKYRNQ 489
+ M +A K AAA HPGLCGV+HA +IA VK+QDV+ + G+T ANKYRNQ
Sbjct: 1 MPSMKVAAAKVAAAEHPGLCGVYHAHIIAVVKSQDVLARSGSTAANKYRNQ 51
BLAST of mRNA_P-littoralis_Contig1224.8.1 vs. uniprot
Match: A0A6H5K6T9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6T9_9PHAE) HSP 1 Score: 66.2 bits (160), Expect = 2.870e-11 Identity = 31/51 (60.78%), Postives = 37/51 (72.55%), Query Frame = 1
Query: 337 LEDMSLAKKKKAAANHPGLCGVHHAAVIAGVKTQDVVDKWGTTTANKYRNQ 489
+ M A K AAA HPGLCGV+HA +IA VK QDV+ + G+T ANKYRNQ
Sbjct: 1 MPSMKAAAAKVAAAEHPGLCGVYHAHIIAAVKIQDVLARSGSTAANKYRNQ 51 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1224.8.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1224.8.1 >prot_P-littoralis_Contig1224.8.1 ID=prot_P-littoralis_Contig1224.8.1|Name=mRNA_P-littoralis_Contig1224.8.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=107bp MHFCFIFIFMWAGTSVLLLRPAAALQSNPNPNKPIQAQTNGRATHARRRWback to top mRNA from alignment at P-littoralis_Contig1224:53004..53493+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1224.8.1 ID=mRNA_P-littoralis_Contig1224.8.1|Name=mRNA_P-littoralis_Contig1224.8.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=490bp|location=Sequence derived from alignment at P-littoralis_Contig1224:53004..53493+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1224:53004..53493+ >mRNA_P-littoralis_Contig1224.8.1 ID=mRNA_P-littoralis_Contig1224.8.1|Name=mRNA_P-littoralis_Contig1224.8.1|organism=Pylaiella littoralis U1_48|type=CDS|length=321bp|location=Sequence derived from alignment at P-littoralis_Contig1224:53004..53493+ (Pylaiella littoralis U1_48)back to top |