|
|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 1 |
| Model size | 630 |
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Cds size | 468 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789530.7291293-UTR-P-littoralis_Contig1223:6624..6784 | 1680789530.7291293-UTR-P-littoralis_Contig1223:6624..6784 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig1223 6625..6784 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789530.7377415-CDS-P-littoralis_Contig1223:6784..6859 | 1680789530.7377415-CDS-P-littoralis_Contig1223:6784..6859 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1223 6785..6859 + |
| 1680789530.749822-CDS-P-littoralis_Contig1223:14355..14748 | 1680789530.749822-CDS-P-littoralis_Contig1223:14355..14748 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1223 14356..14748 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1223.7.1 >prot_P-littoralis_Contig1223.7.1 ID=prot_P-littoralis_Contig1223.7.1|Name=mRNA_P-littoralis_Contig1223.7.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=156bp
MSRVLLNWSNARFLRADKVEQKTYQRILHSFQKVSLSEVEHMVRGAEREM
KNTAARGSGAVPDTPSPCPGRVGVAGAGMGKGGDPGGDRRDGTGVWCDYH
HLDTHSNEECSYQRQRSRYGSGGRFGKFPHPGRHWLPTGRGRGGWEETQG
QQHHTG back to topmRNA from alignment at P-littoralis_Contig1223:6625..14748+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig1223.7.1 ID=mRNA_P-littoralis_Contig1223.7.1|Name=mRNA_P-littoralis_Contig1223.7.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=8124bp|location=Sequence derived from alignment at P-littoralis_Contig1223:6625..14748+ (Pylaiella littoralis U1_48)
TATCTCCAGCATCCTCTATTCGTATTCGGACACCGCAATTCTCGCCGCAC
ACGTACCATCCTCTGACCCTTGACTGTGTTGAACAGACTTACGCCGCACA
CACAGCTCTACCCATGTGAGGTCGGTGGCTGCGGCAGCTGCTGCAATAGG
GTGCCTCCGAATGTCCAGGGTACTGCTGAACTGGAGCAACGCGCGCTTTC
TGAGAGCAGATAAAGTGGAGCAAAAAACATACCAGGTATGTACGAAGTAT
ACACATAGTCTAGTAACACACAGAGCACACACACGATTCGTCTTTCGGCA
GCACTGCTGCCGTTTTCCAGTCTCCACCCTGTTCTACCCAAGTCGCACAC
AGCACGATCCGAAGACCGGCTAGAACCGCTGGTCAGCGTACAATACAGTG
AACAGTGAAGGAACCGTACCCAGAGGTTGTATCAGCTGTGTGTGCTCGTG
GCGGACCCATTATTGCTGCTGCTGCTGCTATGATTGCAGTGGTGGTTGGT
GCAGCAGCCGACCTTGCATGTTTCGCCCTACCCAAGCTATTGAAGCAAGC
ACGCAAGGCTGTGACAGGTGATCTGGCGCATCCACTGTTGTGTTCGATAA
TGGGGCTAAGTTCTAGCTAGGGGTTGTGTGGAGTGTGGGCATCTCGGCCA
CACAGGCCGAGGTAGGAAACGCTCGTTGTATTATTGACCTCGAAGGAAAC
AAACACCGAACAAGATGAAGAGTAAGTATCGAAGCAGAGACCAAAAGCAG
AGTGACGTGGATGCGGCACATCCATCACGGAATCACTCCGTCACCAAATC
CAATACGTAAACCGAATCTCCCATCATGCCAAGATACTCCGGGGAAACTA
CCCATAATTTTCCCCGAATGTCGCAACCTACCGACTGCAATAATATACGT
AAATAGATATCCATTATCCATCCATCATACTATGCTACGAGGACACCCAA
TATATCTTTCAGCCCCCCTGCTCGTATCCATCGTAATGATACGACAAATC
AAAACATTTCCACCTGCGCCCCAGTATCTCCGAAACATCAAATCACTTCT
TGTTGTATACCATGAACCATACCAGGTAGAACGGCGGATCAAGATTGAAT
TTACTTCCGAATTCCACATGATACAAACAACGCCTCTTCTTACCGAAAAT
AACTCCTCCGACGGCATCGAAATACAAACGGTACTAGTACTAGCAAAACT
CACCAACCATCAATTCTCAGTGACCTGTTGTTTACCGACTACTATGGCGT
ATAGGATTAATTAGCCCCCTATAGCCTAAGCTTAGCTGGAGTACCACTTT
GCGGTGATAGAGCTGGGACAAAATGGATTTTGAGAGTCTACAAGCGCAGG
AGCGCCAACGAATCGCGGAGAACTCGAGCATGATAGCCAGCTTCACCCAA
GATCGGGAAGTGGTTGAGTGATACTCACATCAGGGTTGGAGTAGAGGGCT
TAAATTTGGACGAATTGCGTGCAATATTCAAGCGAGACAGTAGAGCGGGC
AGTCAGAGCGTGGAACATGCTGATCTCAACCATAGTCTACACGCCCGCAC
TCACACAGATCCTGGCAGACGGTAGCCCAATAAGGGCTGGGAAATTTTCT
GTAGGTACTACAAGCCTCAGGCAGCAGCAGAGAAATCCAAACTTTCCCAA
GAGTACCGAAGAGACCCCGCAGTCATACTTCGGTAGATTTGCAGTGCTCC
GTAGCAAGCTTGCATCACATGGTGTCTTGTTTCCCGACGACGATGCAAAC
CTACACTTGGTTCGCAATCTCTCCCCCGACTATAAGCTACAAAAGGGTAT
CCTTCTCGCCCTTAAAGATTTAACTATGCAGGGAATTGAGGAAGTGGTTC
GGGACGCCCACGGGGAGTTGGAGATCCAGCGGGAGGAGGAGCGGAAGAAT
GGGGCGGGGCACGCTTTCGTCGCATCCGGCATGGGCCGGGGCGATGCACG
TGTCCAAAATGGGTCGAGGGGGAGCGGCGGACGGAGCCGGAACGGCAGGT
ACAGCAGGAGCAACGGACACCAAGGAGACCACGACTTCAAGCCCTGCCAC
CTTCACCCGCAGTCGAACCACACCAACGGGCAGTGTGTATATCGGCACGG
GCCCCCGCAGCAACAGCAGCAGTATGGACAGCAGCAGCAGGACAACCGTG
GAGGTCGTGGCTGGGGTGGTTTTTCGCAACAGCAACGGCAACAGCAACAA
CCCCACTACAGCAGCCAACGCCCCGACGGATGGAGCGGACAGCAGCAGCA
ACAACAGCATCACGGTGGCCGTGGTAGAGGCGGCTGGGGCAGTATGTCTC
AGCATGGATCACACGGCGGCCGCGGAGGACAGCAGCACCAACCTGGAGGA
CGAGGACCTGGTGGTCGTGAAAACGGTAGGCCGCCGCCTTGGAGTGATGG
CGGGAGAGGCAACATGGGGCGGGGTAATTCCGCTCCCCCCCGCCAGACTC
CGACCCAGCAACAGCAGTGGAGGCCTCCGCACGGGCGCGCGAACATCGTA
CACTCGTATAGCACCGCCTTTATGGCACAGCCCACCACGTCATCTGGAGC
CAGCACCGTCGACTACAGCAGTGAATACTACGACGGCGGCGACAGCAGCA
CCAACACTTGGGACTCGTACCAGCAGCAGCAGGAGGCGCATGAGCCACAG
TACTACCAGGAGTATCATCTGGAACCGGAGGAGCAGCTACCGCCACAGCA
GTACCACTACGAACAGCAGCAGTCACAGCCGCCTCCTCTGCCGACCTTCC
ACCCTCAACAGCAGCAGCCACAGCAGCCCTCGACCTTTGCCCCAACCCAT
TCCCCTTCTCCCGGTGCGTCTTCATCTTCCCCGGGGGGGCTCCACTTCCT
CATGGCACGCTTTGTGTCCCCAGGCGAGTTTAGTTCGGTTTCGCATGGTC
TTGGGGGTGGTGGTTTTGCTTTTTCGGCTCAGAGCCATGGTGTTGGAAGC
GGTAGAGAGCGATTTTGGGCTGATAGTGGTGCAAGCAACAGTTTTATCGG
CGATGGTACCCACATGTTCAACATCAAACCTGTTCCCCCTGGTAAAGAGT
TTGTGCAGGTTGGCAACGGAGCGTTTTTGCGAGTACAGTGTGTAGGCACC
ATCAACCTCGTGTTCCACATGCAGACTTCGACTGGAGAGATAGATTTCCG
TGTACAAATGTCGGATGTGTACCTTGTGCCAGGCATTAGCTTCAATTTGT
TTTCTCTGCACCACGCTCAACGCAAGCAGGGAATTTTGCTAGACTACAGG
GGCGTTCACTTGTTTGATGGGCAGCTGTGCTTTGCATACTCTGACGTTGG
ATGTTCGCTTTTGGCTACTCGCTTGCCCCCTAGTTGTGCTGACGGTGCCG
TGGCCTACGGCCATGGTGCCCCCCCGAGTCCCTCTCCGCAAGGTATGGCT
CATCCTGATGTTGGAGTAAGCACTGGTTTTATTGCATCCAACCCGCCCCT
TTTTTCTCCCACTGCTGCAGCAGAAGAGGCGTGTTCTACGCCCAGATTCC
CGCCCACCGCAAACGGTGTCGTGCCTTCAGAGTCTCGTGTTGTCGATGTA
GGACCCAAGGTGTGCGATTTTCAGCCTGTGCTTGCCGATGCTGTCATGTC
TTCTGAGATTGTTTCCCCTTCCACTTTGAACGCTGCTGCGcCGTGTGAAG
TAGAGATTGAGCCTCTGGTCCCCCACGGTAATTTGGCACTGATGGACATG
AGCGTGTTTTTGGATGTCGCGCTCATGGATGGTAAAGACTCCGTCCCCCC
GGAAGATTTTTTTTCCCGACTTTCTTGGTGTAGAAGGTGTGCCCGAATTA
CCGCCTGTTGACGACCATGTCCTGCAAGAAGAGTTGGAGGTTATTGCAGC
GTTTCTGACGGAGTGCCGTCTGCAGCAACCAATTTGCCCCCGTCCCTTCC
CCATGCTTTGGCGATTTTAGTGCCCGGTGGTCCGGCATTTTTTGTAGGGA
AGCTCTCTTTGACAATCGATATTAATTTGTTCCATGCTTCCACCGGCCAC
GTGAACGAATTTTTGATGAGGGAAACCGCCAAACAGCAGGGTGTACGACT
GATCGGTGTTCTGCAGCCGTGTGTGGGCTGTTTGGAGGCGAAGGGGAGGA
AGGCCCCGGTGCCGCGGCGTGGAGTCACCCGCGCGGCGGTACCGTTTGGC
AAGGTGCACATCGACCTCTCCGGGCCTTACAAACCGGCGCTGGATGGATC
CACGTACCTGATCATGTTCGTGGACAGCAACTCGCGGTGGCAGCGGCCGT
ACGGGATGCGTTCGAAGGCGGAGACCCTGAAGTACGTGAAGCGCTTTCTG
GCCGACATGAACGGCATGGGCACTCCGGGGTGCTTTCGGATGGACAACGG
CGGGGAGTTCGTCGGCCACGAGTTCGTCGCTTTCTGCGACAACGCCGGCA
TCCGGCGCGAGTACACCGCGCCCGACACCCCCAAGCAAAACGGTGTGGTG
GAAAGCGCCATCTGGCGCGCCATGAAGGGCGGTCACGCCGCGCGCCGTCA
CGTCTCCGCCATGCCGCACATCGATCTCGGAGCCATCCCCAACGTGGACG
CCGACGGCCACCGGCTCTGGCTTGCCTCCGCCGTCTGGGCGTCCAACTGC
TTCAACCGCTCCGCCACCAAGGCCAACAAGGGCTGGATGTCGCCGTTCGA
GTGCTTCTTTGGACGGAAGCCGCCACTCAAGGTCATCCCCTTTTTTCAGG
AGGGGATGATGCGCGTCAAGCGCGCCAGCAAGGCGGACGTGCAGTCCGTG
CGGTGCTTTTACCTGCACGGCGCGAACAACCATTCCGCCTCCACTGCCGT
GGTGCTTCGCGCTGACACCGGTCGTCTCTGCCTCACCACAAACGTCGTGT
GGACCGCACGCGGCACCTCTGGAGTTCCGGCGACGGTACCGAGCATCCGG
GGGATCTTCGGTCACCGCGGCGCCCGCGACGGTCGCCGCCGTACCTCCTG
CCGCTGTCGCACCGCCGCCGGGTTTGGAATATACCCTGATGTACACCCCT
GCTGCACCGATCGCCACGGCTCCGCCCGCGATCCAGACGCCGTCTGCACC
CGCTTTCCCGCCGATGTTCACCGGGTCCGCCGCTCCTTCGCCGATTTCTG
TTGCGACGTCGTCGACGCCGCCCGCGCCAACGCCACCGCGCCCGCCGCCC
CCTGCCAGCGCTGTTGCCGAGCCACCACACCCACCGCTTTCCACCACGGC
AGCTCGGGAGTTGGGGCTTGGGACCGAGACGAGGGTTCATGGCCGTACGC
GTGGCGATGGAGTGCGCTTCATGGAGCAGCAGCAGCAGCAGCAGCAGCAA
CACCTTGGAGAGGCGCCACCGCATGTTGAGGTACCGCCTCCACCGCCTTC
CACCGGCGACACCGCTCTTGACCATCGCTTCGCTCTCATGGCGATGATGG
ACAACAACGCACTCGCTTCGGCGATCGCCGCTCATGAGGCCGTCGGTCAA
GGACGTCGCGAGCCGCTACCGCAGCTGCAGCCGGAGGACCAATATGTGCC
ACCGCCGCTACCGCCGGATGATTCCTTTGTGGGAGACCGCGGGAGCGGGG
GGCCGCAGGAGCCGGAGGGGGTGTGGGGGGCGAGGGCCACCAAAGGCAGC
CGCACGGGTTTGCGACTCTGTTCGCCACTCGTGAAGACGTCGACGCCGCA
CTTCGAGCTGAGCGTCCGCCCGAAAAGAGCCCTGATCTGCCGCACTGCTA
CGCCAGCGACATCCGCGTGCCAAAGACCATCAACGAGGCAGAGAGGTCCG
AACACTCGAGACTTTGGAAAGATTCTGTAGCCCGAGAATTTCATGGTTTG
TTGGATGCAGGAACCTTTGAGCCCGTGTAGCAACCAGTAGAGAATTTCAT
CAACGCAAAGTGGGTTTTTGACTGTAAGGCAGATGAGTACGGTTGGCCGA
CGAAATTCAAGGCAAGACTTGTAGCACGAGGTGACATGCAGAGAGCTTCG
ATTGATTTTGGAGAGTTGTTTGCACCCACTGTGTCTGCTTCTAGTGTGCG
TTTGTTGGCAGCCTTGGCGTGTGAGCAAAACCTTGACTTGTGCCATTTTG
ATATTCAGCAGGCTTTCGTGCAGTCTGATCTTGATGAGGATGTTTTCATG
CGTTTACCGCAGGGCTGTGGTAGGCTGTCTGGTATGATAGTGAAGCTGTG
CAAGAGTTTGTATGGTTTGAAGCAGGCATCACGGCAATGGCATGCGCACC
TGACGAGGTGTTTGTTGGTTTTAGGATTTTTGCAGTGTTTGGCTGATGCA
TGTGTTTTTCGATTGATGGAGGAGGGACGTGTTGTCATGATCATCGTGAT
ACACGTAGATGACATTTTTGCTGTAGGAGAGAAGCAGAGGTGCGACCAGT
TTGGTAGGGACCTAAATGAGATGGTGCCCGTGAAGAACCTTGGGGAGTTG
CGGTGGTACTCGGCGTGTTTTTATGAGAGAGATGTTGAGAGAGGGCTGTT
GAAGATTTCTCAGCAGACGTACGCCGAAGAGTTGGCAGCAGAGTACGGAG
TGGAGTGGGGCAAGAGTGTTCCGCTTCCGGCCAGTGTAAAACTTACGGAG
TTTGACGAGGATGAGGTGTGTGATTTTCCTTTTCGTGAGTTGGTTGGATC
TCTGATGTGGTTGGCCACTCAAACACGGCCGGACATCGCAAACGCAGTGA
GAGCAGTAGCGAGGTACTGTGCTTCCCCAAAAACGGTGCACTGGAAGGCA
GCACTTGGTATTGTAGGGTACGTCCGCAGGACGAGTTGGATGGGTATTAC
ATTGCAGGGGGGTCGTGAGTGGCATGAGCATGCAAGTGTTTGTGGATGCC
GACTATGCGAGCAAGGCGGCAGACAGGAGGTCGGTGTCGGGAGGCCTTGT
GATGTGTGGTGGTGGATGTGTGACTTGGTTTTCTAGGACGCAAAAGTGCG
TGACGCTTTCGACAACGGAGGCGGAGTACGTGGCAATTGCAGATGTCTTG
AAGGAAGTGTTGTTTTTGAGGCAGGTTTGGCGTTTTATGTTGCCAACAGC
GGGCATGCCTTGCATCCCAGTGTTCGAGGACAACCAGGGTGCGATTCAGA
TCGCCCACAATCCAATCACCAACTCGAACTCGAAGCACATAGACGTACGG
CATCACTTTATCAGGGAACTGGTAGAGAGGAAGGAGATTTCGATCACACA
CGTGACGTCGGAATATCAGCATGCAGATTTCTTGACGAAAGCAATCAGCA
GGGAGTCTTTTGAACTGCACCGTGATTTTGTGATGAATTTGCAGTGAAGC
ATGAATTTTTGTCTCTGCGGTTGGCTTTGTTTTGAATTGTGTTTGTTTTG
TTTTTGTTTGATTTTGTTTTGATTTTCTGGTTGATGAAAAAGGAAGAAGA
GAAGACAGGAAGAATGAACATGTTTTTATGATGGATATTTTTGGTGTGTT
GGATTTCTTTGGATACTTCGGGATTTCGGGCAAACATTTTGTCTTGGTTG
TTTTTGATTGAAAGTAGTACAGAGAGTATTTTGTGGGGATTATTTGACTT
GCCGTATCCCTTTGTGAATCTTGTCATCTCGGAGATTCGATTCGTGTGAT
TGCGTGATGTGATTGCGCCGCGTTTGCGACTCTCTCCTTTTCTGGTAGCC
GTGTGCCCTCCCCCGAAGGAGGTTGATAATACAAGCTTTTCATCCCAGGC
CGTGTTGGCCGGATTGCTCTTTACTCCACACAACCCCAAGCTTAGCTTAC
CCCCAGTATCGAACATTTCAACGTTGAAAAGAGGATTCTCCATTCGTTTC
AAAAGGTGTCTCTGAGCGAGGTCGAGCACATGGTGAGAGGAGCTGAACGA
GAGATGAAGAACACGGCAGCGAGGGGGAGCGGGGCGGTGCCGGACACGCC
CTCGCCATGTCCGGGACGAGTCGGAGTGGCGGGGGCCGGGATGGGCAAGG
GGGGCGACCCTGGAGGAGATCGGCGTGATGGAACCGGAGTCTGGTGCGAT
TATCATCACCTGGACACACACAGCAACGAGGAGTGCTCGTATCAGCGGCA
AAGGAGCCGCTACGGCAGTGGGGGGCGATTTGGCAAGTTTCCGCACCCCG
GCCGACACTGGTTGCCTACCGGCCGAGGCCGTGGTGGCTGGGAGGAGACG
CAAGGGCAGCAGCATCACACCGGT back to topCoding sequence (CDS) from alignment at P-littoralis_Contig1223:6625..14748+ >mRNA_P-littoralis_Contig1223.7.1 ID=mRNA_P-littoralis_Contig1223.7.1|Name=mRNA_P-littoralis_Contig1223.7.1|organism=Pylaiella littoralis U1_48|type=CDS|length=468bp|location=Sequence derived from alignment at P-littoralis_Contig1223:6625..14748+ (Pylaiella littoralis U1_48)
ATGTCCAGGGTACTGCTGAACTGGAGCAACGCGCGCTTTCTGAGAGCAGA
TAAAGTGGAGCAAAAAACATACCAGAGGATTCTCCATTCGTTTCAAAAGG
TGTCTCTGAGCGAGGTCGAGCACATGGTGAGAGGAGCTGAACGAGAGATG
AAGAACACGGCAGCGAGGGGGAGCGGGGCGGTGCCGGACACGCCCTCGCC
ATGTCCGGGACGAGTCGGAGTGGCGGGGGCCGGGATGGGCAAGGGGGGCG
ACCCTGGAGGAGATCGGCGTGATGGAACCGGAGTCTGGTGCGATTATCAT
CACCTGGACACACACAGCAACGAGGAGTGCTCGTATCAGCGGCAAAGGAG
CCGCTACGGCAGTGGGGGGCGATTTGGCAAGTTTCCGCACCCCGGCCGAC
ACTGGTTGCCTACCGGCCGAGGCCGTGGTGGCTGGGAGGAGACGCAAGGG
CAGCAGCATCACACCGGT back to top
|