mRNA_P-littoralis_Contig122.16.3 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig122.16.3
Unique NamemRNA_P-littoralis_Contig122.16.3
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig122.16.3 vs. uniprot
Match: D7FNE8_ECTSI (Novel protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNE8_ECTSI)

HSP 1 Score: 1142 bits (2954), Expect = 0.000e+0
Identity = 786/1415 (55.55%), Postives = 861/1415 (60.85%), Query Frame = 1
Query:    4 GRTLDASGVACRAVVE-NQTPGQHSGPADSVIDHASDEADESQRRTSTAHADGRRASRHGGAEEAAAGKTMPDGSLWEGLGSWEGLGEGLSGAFLFAQQGLEGLNILPGGADAFWMSFGRMDVPELPVLSEIRLFGLSWPPPPWPSQTTGFSTAEKDGKLPQQRQPVAPPSGAASTTPAAGGTEAAAGRGMDSEVVTRTGAGKERW--ELLSAWRRKRPAV------TAAVAVGGEDIGGDSGTEAAXXXXXXXXXXXGGAEGTRRKVGGLAALRNRLPLLGR---GRXXXXXXXRRXXXXXRRGSGGSAT-----VKGDVGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKTEASK-------MLPLPATGTARSGEGSSSGPATGKDVRLSNQRGLADEPLR--------GETGSGTGGGGRVAGPKPKEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAAAAPTHFIPKFAPPPNAWKILSSKLPTEKEKXXXXXXXXRSTNGSPDDVFTSVA------------SADRAASRLDETNDXXXXXXXXXXEFHDFGDVPLSVTRIPTPPDMEITINRSSGTPANAETRSAAAAAAKAAVDSDNVLEEWVDGEPVEVHHGRYRE--QPKRPADLSGTSVEMKLVEMACLSGLSSSAGKSAGRIMHEELGFGHLLRGLREDVRPSLRRRVLQAISAVVDSDPSLAPHLLGID--HNPDGDVSAARSKTKEXXXXXXXXXXXXXXXXXXXXXXITKGREGRNKK---------AGAGGGKPGSRVGVGAVAAVVVGEDDLLECITAILGYHSVAGVGGXXXXXXXXXXXXXXXXXAVGVRVEGSG-GLVGRVFRAVAELLPVPRVWPFLSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXMEKERD---EVANEGRDWWKDEVAIEEERLEQQAAAGGTAIGDRVRGGSGWVWWGR---GRSRRASRERLVEEALELTFRLIMSGDAALDALKVDENLVTALKRVAEGGGQRFQYDAKGVLRRVGPRLSHSQLLANKCLASLGAHEWRPKMVGQKGLRILCFDGGGTRGVLTLALLKHVEKALGGRQPHEVFDMIVGTSTGGIIAGLAGVKCFPVAECEKMYDNLINKIFIKRPGGGMKLALKQASSGAFYDEVGWMKILDSILGDQLMVDSAQDPLRPMIVCPSTIISSNPAKVMLWRNYNYPPGHQSRYYGSFRHMVREAIRATTAAPTFFAPLMINGALYSDGALLCNNPSAVAFHEAKHLFPGVPVEMIVSLGTGCFFEEKKEFLEPAALGWDGIINQVIASATETEITTDIVSDLLPPELFFRFNPRMKDMPIDEVRKERLDWLKTLADEYFETPENQARLQEMAEKMLSD 4056
            GRT +   VACRAVVE NQT GQ+  P +S+ D     A   +   +   A        G  EE   G+ +PDGSLWEG+G      EGLSGAFL AQQGLE LN+L G  DAFW++FG+MDVPELP LS++R+FGLSWPP          +           R+P   P+ AA  T A G TE  +G G +S   T TG  K R     L  WRR RP        T A A    D   + G +                 G  RKVG LA LR RL L G    G                 G+  SA       +   G G                                                T A K          L   G A     +SS   +         +G               G  G  T   G+VAG                    XXXXX                        XXXXX    APTHFIPKFAPPPNAWKILSSK P E+ K        RS    P     S +            S++ +A+ +D+ +           EF DFGD+PLSVT IP PPDMEITINRSSGTPANAETR AAAAAAKAA DSDNVLEEWVDGEPVEVH GR     +P RP  LSGTS EMKLVEMACL+GLSS AGKSAGRIM EELGF HLLRGLR DVRPSL+RRVLQAIS V+DSDPSLAPH LG+D   +PD D +A       XXXXXXXXXXXXXXXXXXXXXX                    AGAG G P S           VGEDDL+E ITAILGYH V G G XXXXXXXX         AV     GSG G +GR FR     LP+PRV PF S+                             E E +   + A EGRDWWKDEVA+EEE LEQQA                         GR RR SRERLVEEALELTFRLIMSGDAALDALKVDENLV+A+KRVAEGGGQ+ QYD++GVL+R GP L+HSQLLANKCLA+LGAH+WRPK  GQKG+RILCFDGGGTRGVLTLALLKH+EKALGGRQPHEVFDMIVGTSTGGIIAGLAGVK FPVAECE+MYD+LINKIFIK PGGGMKLALKQA    FYDEVGWMKIL+SILGD LMVDSAQDPLRP+I+CPST ISSNPAKVMLWRNYNYPPGHQ RY+GSFRHMVR+AIRATTAAPTFF PLMINGALYSDGALLCNNPSAVAFHEAKH FPGVP+EMIVS+GTGCFFEEK+EFLEPA LGWDGIINQVIASATETEITTDIVSDLLPPE FFRFNPRM DMPIDEVRKERLDWLKTLA+EYFETPENQARLQEMAEKML D
Sbjct:   12 GRTTE---VACRAVVEENQTSGQNGRP-NSIADQQEGSASGLKGTPTLPRA------HEGEGEE---GERLPDGSLWEGIG------EGLSGAFLHAQQGLEELNLL-GVGDAFWLNFGQMDVPELPTLSDLRIFGLSWPPXXXXXXXXXXA-----------REPKLQPASAAPATTANGETEGLSGGG-ESVTGTITGEIKTRGLTRRLPPWRRGRPKTDGGVGRTPAAAAAAVDSASEEGQDRPITKA-----------GRWRKVGALAGLRKRLSLYGTHGGGGATSGQGHFEGTSPVTAGAPASAGGRWWFARNGAGEGEVQPQKGRRGGIAAGGKSGGGGSTRSMQRKGKDPSVGLSAPGKLEPAVTPAGKSSSRTLTQQQLDRAGQALVDRRNSSPKISPXXXXXXKDKGKKQXXXXXXXXXXXAGPAGPPTSSKGQVAG----------RANVGEPPRGXXXXXKAVPEADKTSSKGERSVDNGGKAAXXXXXXXXTAPTHFIPKFAPPPNAWKILSSKSPVEEPKASDQSGD-RSPAAPPSSSVPSGSVGAVGQDKWEGGSSEGSAADIDDDD------GEEHDEFRDFGDLPLSVTSIPRPPDMEITINRSSGTPANAETRPAAAAAAKAAADSDNVLEEWVDGEPVEVHRGRMTSSWKPTRPDGLSGTSGEMKLVEMACLTGLSSRAGKSAGRIMLEELGFSHLLRGLRGDVRPSLQRRVLQAISTVIDSDPSLAPHFLGLDGLDHPDDDKTAKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAGAGDGSPSS-------PGPAVGEDDLVERITAILGYHMVPGGGXXXXXXXXXFGVPGGVEAAV---APGSGDGPLGRAFRLAVGSLPLPRVRPFSSSAAAESLGFHQQQRSPLEGAAVVGRGAGTREGEGEGDFQAAREGRDWWKDEVALEEEGLEQQAXXXXXXXXXXXXXXXXXXXXXXXXXGRGRRVSRERLVEEALELTFRLIMSGDAALDALKVDENLVSAIKRVAEGGGQKLQYDSRGVLKRAGPPLTHSQLLANKCLAALGAHQWRPKTRGQKGVRILCFDGGGTRGVLTLALLKHLEKALGGRQPHEVFDMIVGTSTGGIIAGLAGVKAFPVAECERMYDSLINKIFIKHPGGGMKLALKQA----FYDEVGWMKILNSILGDMLMVDSAQDPLRPLIICPSTTISSNPAKVMLWRNYNYPPGHQGRYHGSFRHMVRQAIRATTAAPTFFPPLMINGALYSDGALLCNNPSAVAFHEAKHAFPGVPIEMIVSIGTGCFFEEKREFLEPAGLGWDGIINQVIASATETEITTDIVSDLLPPEQFFRFNPRMTDMPIDEVRKERLDWLKTLANEYFETPENQARLQEMAEKMLPD 1352          
BLAST of mRNA_P-littoralis_Contig122.16.3 vs. uniprot
Match: A0A6H5KXR6_9PHAE (PNPLA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXR6_9PHAE)

HSP 1 Score: 1098 bits (2840), Expect = 0.000e+0
Identity = 654/914 (71.55%), Postives = 696/914 (76.15%), Query Frame = 1
Query: 1414 AAAAPTHFIPKFAPPPNAWKILSSKLPTEKEKXXXXXXXXRSTNGSPDDVFTS--------VASADRAASRLDETN--DXXXXXXXXXXEFHDFGDVPLSVTRIPTPPDMEITINRSSGTPANAETRSAAAAAAKAAVDSDNVLEEWVDGEPVEVHHGRYRE--QPKRPADLSGTSVEMKLVEMACLSGLSSSAGKSAGRIMHEELGFGHLLRGLREDVRPSLRRRVLQAISAVVDSDPSLAPHLLGIDH--NPDGDVSAARSKTKEXXXXXXXXXXXXXXXXXXXXXXITKGREGRNKK-------AGAGGGKPGSRVGVGAVAAVVVGEDDLLECITAILGYHSVAGVGGXXXXXXXXXXXXXXXXXAVGVRVE--GSGGLVGRVFRAVAELLPVPRVWPFLSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXMEKERD---EVANEGRDWWKDEVAIEEERLEQQAAA-------GGTAIGDRVRGGSGWVWWGRGRSRRASRERLVEEALELTFRLIMSGDAALDALKVDENLVTALKRVAEGGGQRFQYDAKGVLRRVGPRLSHSQLLANKCLASLGAHEWRPKMVGQKGLRILCFDGGGTRGVLTLALLKHVEKALGGRQPHEVFDMIVGTSTGGIIAGLAGVKCFPVAECEKMYDNLINKIFIKRPGGGMKLALKQASSGAFYDEVGWMKILDSILGDQLMVDSAQDPLRPMIVCPSTIISSNPAKVMLWRNYNYPPGHQSRYYGSFRHMVREAIRATTAAPTFFAPLMINGALYSDGALLCNNPSAVAFHEAKHLFPGVPVEMIVSLGTGCFFEEKKEFLEPAALGWDGIINQVIASATETEITTDIVSDLLPPELFFRFNPRMKDMPIDEVRKERLDWLKTLADEYFETPENQARLQEMAEKMLSD 4056
            AA A THFIPKFAPPPNAWKILSSK P E  K        RS  GSP    +S        V   D+      E +  D          EF DFGD+PLSVT IP PPDMEITINRSSGTPANAETR AAAAAAKAA DSDNVLEEWVDGEPV+VHHGR     +P RP  LSGTS EMKLVEMACL+GLSS AGKSAGRIM EELGFGHLLRGLR DVRPSL+RRVLQAIS V+DSDPSLAP LLG+D   +PD            XXXXXXXXXXXXXXXXXXXXXX                  AGAG G P S           VGEDDLLE ITAILGYH VAG GGXXXXXXXXXXXXXX    V   V   G  G +GR FR V   LP+PRV PF SA                             E E +   +VA EGRDWWKDEVA+EEE LEQQAA        GG+           WVWW  G+ RR SRERLVEEALELTFRL+MSGDAALD LKV+E+LV+A+KRVAEGGGQ+ QYD++GVL+R GP L+HSQLLANKCLA+LGAH+WRPKM GQKG+RILCFDGGGTRGVLTLALLKHVEKALGGRQPHEVFDMIVGTSTGGIIAGLAGVK FPVAECE+MYD+LINKIFIK PGGGMKLALKQA    FYDEVGWMKIL+SILGD LMVDSAQDPLRP+I+CPST ISSNPAKVMLWRNYNYPPGHQ RY+GSFRHMVR+AIRATTAAPTFF PLMINGALYSDGALLCNNPSAVAFHEAKH FPGVP+EMIVS+GTGCFFEEK+EFLEPA LGWDGIINQVIASATETEITTDIVSDLLPPE FFRFNPRM DMPIDEVRKERLDWLKTLA+EYFETPENQARLQEMAEKML D
Sbjct:  340 AATAHTHFIPKFAPPPNAWKILSSKSPVETPKASDQSGD-RSPGGSPALPSSSSVPYGSGGVVGQDKREGGSSEGSAVDIDDDDGEEHDEFRDFGDLPLSVTSIPKPPDMEITINRSSGTPANAETRPAAAAAAKAAADSDNVLEEWVDGEPVQVHHGRMTSSWKPTRPDGLSGTSGEMKLVEMACLTGLSSRAGKSAGRIMLEELGFGHLLRGLRGDVRPSLQRRVLQAISTVIDSDPSLAPILLGLDDLDHPDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAGAGDGSPSS-------LGPAVGEDDLLERITAILGYHMVAG-GGXXXXXXXXXXXXXXVPGGVEASVAPGGGDGPLGRAFRLVVGSLPLPRVRPFSSAAAAESSDFQQQRPPLEGAAVVGRGNGTREEGEGEGDYQVAREGRDWWKDEVALEEEGLEQQAATQAAAMFPGGSXXXXXXXXXXXWVWWW-GKGRRVSRERLVEEALELTFRLVMSGDAALDTLKVNEDLVSAIKRVAEGGGQKLQYDSRGVLKRAGPPLTHSQLLANKCLAALGAHQWRPKMRGQKGVRILCFDGGGTRGVLTLALLKHVEKALGGRQPHEVFDMIVGTSTGGIIAGLAGVKAFPVAECERMYDSLINKIFIKHPGGGMKLALKQA----FYDEVGWMKILNSILGDMLMVDSAQDPLRPLIICPSTTISSNPAKVMLWRNYNYPPGHQGRYHGSFRHMVRQAIRATTAAPTFFPPLMINGALYSDGALLCNNPSAVAFHEAKHAFPGVPIEMIVSIGTGCFFEEKREFLEPAGLGWDGIINQVIASATETEITTDIVSDLLPPEQFFRFNPRMTDMPIDEVRKERLDWLKTLANEYFETPENQARLQEMAEKMLPD 1239          
BLAST of mRNA_P-littoralis_Contig122.16.3 vs. uniprot
Match: A0A835YX58_9STRA (Calcium-independent phospholipase-like protein A2-gamma, C terminal part n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX58_9STRA)

HSP 1 Score: 450 bits (1158), Expect = 1.060e-143
Identity = 217/328 (66.16%), Postives = 265/328 (80.79%), Query Frame = 1
Query: 3052 LGAHEWRPKMVGQKGLRILCFDGGGTRGVLTLALLKHVEKALGGRQPHEVFDMIVGTSTGGIIAGLAGVKCFPVAECEKMYDNLINKIFIKRPGGGMKLALKQASSGAFYDEVGWMKILDSILGDQLMVDSAQDPLRPMIVCPSTIISSNPAKVMLWRNYNYPPGHQSRYYGSFRHMVREAIRATTAAPTFFAPLMINGALYSDGALLCNNPSAVAFHEAKHLFPGVPVEMIVSLGTGCFFEEKKEFLEPAALGWDGIINQVIASATETEITTDIVSDLLPPELFFRFNPRMKDMPIDEVRKERLDWLKTLADEYFETPENQARLQEM 4035
            LGA EW PK  GQKGLRILCFDGGGTRGVLT+A+LK +   +G R+P +VFD++VGTSTG I+A LAG++CFP+A+CE MYD LI  IF K P GG+KLALKQA    FYDE  WM IL SILGD+ M+D A  PL P +  PST+IS NP+K+ LWRNYNYP GH  RY GS+RH VRE++RATTAAPTFF+PL+ING LYSDGAL+ NNP+AVA HEAKH++PGVPVE++VSLGTGCFFE+ ++F +PA +GWDGI+NQ+I+SATETE T DI+SDL+P + +FRFNPRM DM IDE R ERL +LK L+D YFE P  +A+L E+
Sbjct:    2 LGATEWVPKTRGQKGLRILCFDGGGTRGVLTIAMLKRIMAEVG-REPAQVFDIVVGTSTGAIVAALAGLECFPLAQCEAMYDALIKDIFQKSPSGGVKLALKQA----FYDEENWMAILRSILGDKAMIDYADTPLAPKVAFPSTVISVNPSKLWLWRNYNYPTGHAGRYSGSYRHTVRESLRATTAAPTFFSPLLINGTLYSDGALMANNPTAVALHEAKHIYPGVPVELVVSLGTGCFFEQARDFSDPA-VGWDGIVNQLISSATETENTNDIMSDLVPAQQYFRFNPRMTDMAIDETRPERLAFLKELSDRYFEEPATRAQLDEL 323          
BLAST of mRNA_P-littoralis_Contig122.16.3 vs. uniprot
Match: A0A0G4F2X6_VITBC (PNPLA domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4F2X6_VITBC)

HSP 1 Score: 352 bits (902), Expect = 6.930e-96
Identity = 198/416 (47.60%), Postives = 269/416 (64.66%), Query Frame = 1
Query: 2848 ALELTFRLIMSGDAALDALKVDENLVTALKRV-AEGGGQ------------RFQYDAKGVLRRVGPRLSHSQLLANKCLASLGAH-EWRPKMVGQKGLRILCFDGGGTRGVLTLALLKHVEKALGGRQPHEVFDMIVGTSTGGIIAGLAGVKCFPVAECEKMYDNLINKIFIKRPG--GGMKLALKQASSGAFYDEVGWMKILDSILGDQLMVDSAQDPLRPMIVCPSTIISSNPAKVMLWRNYNYPP-GHQSRYYGSFRHMVREAIRATTAAPTFFAPLMINGALYSDGALLCNNPSAVAFHEAKHLFPGVPVEMIVSLGTGCFFEEKKEFLEPAALGWDGIINQVIASATETEITTDIVSDLLPPELFFRFNPRMKDMPIDEVRKERLDWLKTLADEYFET-PENQARLQEMAE 4041
            AL L   + +S D  + AL+ D  +   L+R+  + GG             ++Q      L+R   R+      ANK LA++G + +W P++ GQ+GLRILC DGGGTRGVLT+A+LK +   +G R+ HEVFD+I GTSTGGIIA L GV+   V E E +YDNLI  IF+K PG   G +L +KQA    +YDE  W  IL++ LGD  M+D+A DP  P   C ST++S+NP+ ++LWRNYNYPP G Q +Y GSFR   R+A+RATTAAPTFF  L ++G  Y DGALL NNP+A+A  EAK LFP  P+E IVS+GTG F ++         +GWDGI+NQ++ SAT TE T +++S+ LP + +FRFNP+++   IDE    +LD +K  A  YFE  P+N+ RLQ++AE
Sbjct: 1329 ALHLLCTMALSSDRVIWALQTDSRVAPLLRRILVQAGGTNPSAGVVKSRWAKWQGKDDKPLQRDLERIR----TANKLLAAMGCNNDWHPRVPGQRGLRILCLDGGGTRGVLTIAILKFIVAVMG-REVHEVFDIICGTSTGGIIAMLLGVQKSSVNEVEVLYDNLIKDIFVKDPGPISGARLVVKQA----YYDETAWELILENTLGDIRMIDTAADPDVPKTFCLSTMVSANPSSLILWRNYNYPPNGRQGKYAGSFRIRCRDALRATTAAPTFFPALRLDGEAYGDGALLANNPTAIALAEAKALFPDTPIEAIVSVGTGRFPQQSYG----GRVGWDGIVNQLVCSATNTEGTHEMLSEFLPEDKYFRFNPKIEMWAIDETDPGKLDQMKRFAARYFEDIPDNRRRLQQLAE 1731          
BLAST of mRNA_P-littoralis_Contig122.16.3 vs. uniprot
Match: A0A4D9CW07_9STRA (PNPLA domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CW07_9STRA)

HSP 1 Score: 325 bits (833), Expect = 1.430e-94
Identity = 182/420 (43.33%), Postives = 259/420 (61.67%), Query Frame = 1
Query: 2800 GRGRSRRASRE-RLVEEALELTFRLIMSGDAALDALKVDENLVTALKRVAEGGGQRFQYDAKGVLRRVGPRLSHSQLLANKCLASLGAHEWRPKMVGQKGLRILCFDGGGTRGVLTLALLKHVEKALGGRQPHEVFDMIVGTSTGGIIAGLAGVKCFPVAECEKMYDNLINKIFIKRPG--GGMKLALKQASSGAFYDEVGWMKILDSILGDQLMVDSAQDPL---RPMIVCPSTIISSNPAKVMLWRNYNYPPGHQSRYYGSFRHMVREAIRATTAAPTFFAPLMINGALYSDGALLCNNPSAVAFHEAKHLFPGVPVEMIVSLGTGCFFEEKKEFLEPAAL---GWDGIINQVIASATETEITTDIVSDLLPPELFFRFNPRMKDMPIDEVRKERLDWLKTLADEYFETPENQARLQE 4032
            G GRS  +  E R    A+ L + + ++ + A++AL+ +  L+ AL+++     + F+     V   +           +K L+ +G HEW+P+  GQKGLRIL  DGGGTRGV+T+ALL H+ +A G ++ HE+FD+I GTSTGGI+A L  VK   V E  ++YD LI KIF K P       L L+ A     Y+E  W  +L  ++G+ L++D+   P     P     S+++S NPAK+ +WRNYNY    +SRY G FR  VREAIRATTAAPT+F PL+  G ++SDGALL NNP+A+A HEAK ++P VP+E +VS+GTG         LEP  +   GW  I NQ+I SAT TE   D ++D LP + ++RFNP ++++ IDE+R E+L +LK  A EYF+ P N+ RL +
Sbjct:  119 GLGRSHSSIEELRCQRAAIYLLYTMCLASERAIEALQTEGRLIPALQQILRE--RLFEEGPMSVYHTI-----------HKLLSIVGYHEWKPRQAGQKGLRILSLDGGGTRGVMTIALLSHLIEATG-KEVHELFDIICGTSTGGILAALFAVKATKVKEAGRLYDELIKKIFNKSPAPLAYSNLVLRTAQ----YNENVWEDVLKVLIGETLLIDTMGGPQGLNTPKFFVLSSVLSCNPAKLFMWRNYNYRRAQRSRYEGDFRAKVREAIRATTAAPTYFYPLVRGGMVHSDGALLANNPTAIAIHEAKIIYPNVPIEAVVSVGTG-------NVLEPQPVEGFGWAPIFNQIINSATNTEAVHDSLADFLPQDRYYRFNPNIENVSIDEIRPEKLAYLKATAKEYFQDPRNKERLDQ 513          
BLAST of mRNA_P-littoralis_Contig122.16.3 vs. uniprot
Match: A0A7S2R4X2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R4X2_9STRA)

HSP 1 Score: 309 bits (792), Expect = 5.240e-88
Identity = 168/428 (39.25%), Postives = 259/428 (60.51%), Query Frame = 1
Query: 2797 WGRGRS---RRASRERLVEEALELTFRLIMSGDAA-LDALKVDENLVTALKRVAEGGGQRFQYDAK----------GVLRRVGPRLSHSQLLANKCLASLGAHEWRPKMVGQKGLRILCFDGGGTRGVLTLALLKHVEKALGGRQPHEVFDMIVGTSTGGIIAGLAGVKCFPVAECEKMYDNLINKIFIKRP-GGGMKLALKQASSGAFYDEVGWMKILDSILGDQLMVDSAQDPLRPMIVCPSTIISSNPAKVMLWRNYNYPPGHQSRYYGSFRHMVREAIRATTAAPTFFAPLMINGALYSDGALLCNNPSAVAFHEAKHLFPGVPVEMIVSLGTGCFFEEKKEFLEPAALGWDGIINQVIASATETEITTDIVSDLLPPELFFRFNPRMKDMPIDEVRKERLDWLKTLADEYFETPENQARLQEM 4035
            W +GRS      S  +L+   L +   L+++ + + L  L+  + L + L ++ +    R   + K          G +   G + S  +L+    +A LG  +WRP+    KG+R+LC DGGGTRGVLT+A+L+ + +A+G +  HE+FD++ GTSTG IIA L G+K  P+ EC K+YD L+++IF+K    G +KL ++QA    +YDE  W +IL  + G+Q M+DS        ++C +T+IS +PAK+ + RN+NY    +SRY G +R  VR A+R+TTAAPT F PL++NG  Y DGA   NNP+AVA++EA+ LFP V VE+++S+G+G F E + E  E    GWD ++NQ++ S+T+T    + +   LP +++FRFNPRM+ +PIDE     L   K  A E+F+    +  L E+
Sbjct:  113 WRKGRSTPKENTSEAQLL--GLRILRLLVLAREPSILPLLQGSDRLASTLDKMGDAAHSRLMQERKRRDDPTYGRYGGMTVDGSQFSQDELVNMNAMA-LGVRKWRPRSPHHKGVRVLCLDGGGTRGVLTIAVLQQISRAIG-KDIHEIFDVVAGTSTGAIIACLIGLKHTPIDECAKLYDQLVSEIFVKNVISGPIKLGIRQA----YYDEKNWERILLRLCGEQRMIDSTSSATSIAVMCLATVISVDPAKMFVARNFNYARSQESRYLGDYRWQVRHALRSTTAAPTIFTPLVLNGVTYCDGAFFANNPTAVAYYEAQKLFPDVEVELVLSIGSGTFHEVEMESYE---FGWDKLVNQLVESSTDTHRVHETLESFLPSDMYFRFNPRMRCIPIDETNPSALQEHKIAAREFFQEATQRQCLVEL 529          
BLAST of mRNA_P-littoralis_Contig122.16.3 vs. uniprot
Match: D8LL86_ECTSI (Similar to Calcium-independent phospholipase A2-gamma, C terminal part n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL86_ECTSI)

HSP 1 Score: 291 bits (745), Expect = 1.350e-84
Identity = 154/328 (46.95%), Postives = 209/328 (63.72%), Query Frame = 1
Query: 3052 LGAHEWRPKMVGQKGLRILCFDGGGTRGVLTLALLKHVEKALGGRQPHEVFDMIVGTSTGGIIAGLAGVKCFPVAECEKMYDNLINKIFIKRPGGGMKLALKQASSGAFYDEVGWMKILDSILGDQLMVDSAQDPLRPMIVCPSTIISSNPAKVMLWRNYNYPPGHQSRYYGSFRHMVREAIRATTAAPTFFAPLMINGALYSDGALLCNNPSAVAFHEAKHLFPGVPVEMIVSLGTGCFFEEKKEFLEPAALGWDGIINQVIASATETEITTDIVSDLLPPELFFRFNPRMKDMPIDEVRKERLDWLKTLADEYFETPENQARLQEM 4035
            LG H W P+  GQKGLRIL  DGGGTRGVLT+ALL+ V K    +  HEVFD+I GTSTGGI+A L   +   +A    MYD+LI KIF K      KL L+QA     Y    W  IL+ ILGD+ M+D+   P  P +V  STI++ +P ++MLWRNY Y P  +  Y G +R  +RE +RATTAAP+FF PL+    +Y+DGA L NNP+++A  EAK L+P VP+E ++S+GTG +   +KE      + W  ++NQ++ SAT+TE    ++   LP + +FRFN  ++   IDE R E+LD LK LA EY + PE +AR +E+
Sbjct:    2 LGVHHWTPRQPGQKGLRILSLDGGGTRGVLTIALLREVLKGFD-KDVHEVFDVICGTSTGGILAMLFASEKQSLASATTMYDSLIVKIFKKDLLANAKLVLQQAQ----YSSTDWEAILEDILGDRRMIDTMTLPNNPKVVICSTIMNVDPLEMMLWRNYGYRPEQEPPYKGDYRRKMRECVRATTAAPSFFTPLVDGKMMYADGAFLANNPTSIALTEAKLLYPNVPIECVLSVGTGFYVPTRKE----PGMSWGTVLNQLVNSATDTEGVDSMLKTFLPRDQYFRFNAPIQPFDIDETRVEKLDELKALAKEYTQRPEIKARAEEL 320          
BLAST of mRNA_P-littoralis_Contig122.16.3 vs. uniprot
Match: K8Z805_NANGC (Calcium-independent phospholipase a2-gamma n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8Z805_NANGC)

HSP 1 Score: 306 bits (783), Expect = 3.480e-83
Identity = 182/449 (40.53%), Postives = 259/449 (57.68%), Query Frame = 1
Query: 2800 GRGRSRRASRE-RLVEEALELTFRLIMSGDAALDALKVDENLVTALKRVAEGGGQRFQYDAKGVLRRVGPRLSHSQLLANKCLASLGAHEWRPKMVGQKGLRILCFDGGGTRGVLTLALLKHVEKALGGRQPHEVFDMIVGTSTGGIIAGLAGVKCFPVAECEKMYDNLINKIFIKRPG--GGMKLALKQASSGAFYDEVGWMKILDSILGDQLMVDSAQDPL---RPMIVCPSTIISSNPAKVMLWRNYNYPPGHQSRYYGSFRHMVREAIRATTAAPTFFAPLMINGALYSDGALLCNNPSAVAFHEAKHLFPGVPVEMIVSLGTGCFFEEKKEFLEPAAL---GWDGIINQVI--------------------------ASATETEITTDIVSDLLPPELFFRFNPRMKDMPIDEV--RKERLDWLKTLADEYFETPENQARLQEM 4035
            G GRS  +  E R    A+ L + + ++ + A++AL+ +  L+ AL+++     + F+     V   +           +K L+ +G HEW+P+  GQKGLRIL  DGGGTRGV+T+ALL H+ +A G ++ HE+FD+I G STGGI+A L  VK   V E  ++YD LI KIF K P       L L+ A     Y+E  W  +L  ++G+ L++D+   P     P     S+++S NPAK+ +WRNYNY    +SRY G FR  VREAIRATTAAPT+F PL+  G ++SDGALL NNP+A+A HEAK ++P VP+E +VS+GTG         LEP  +   GW  I NQ+I                           SAT TE   D ++D LP + ++RFNP ++++ IDEV  R E+L +LK  A EYF+ P N+ RL ++
Sbjct:  489 GLGRSHSSIEELRCQRAAIYLLYTMCLASERAIEALQTEGRLIPALQQILRE--RLFEEGPMSVYHTI-----------HKLLSIVGYHEWKPRQAGQKGLRILSLDGGGTRGVMTIALLSHLIEATG-KEVHELFDIICGNSTGGILAALFAVKATKVKEAGRLYDELIKKIFNKSPAPLAYSNLVLRTAQ----YNENVWEDVLKVLIGETLLIDTMGGPQGLNTPKFFVLSSVLSCNPAKLFMWRNYNYRRAQRSRYEGDFRAKVREAIRATTAAPTYFYPLVRGGMVHSDGALLANNPTAIAIHEAKIIYPNVPIEAVVSVGTG-------NVLEPQPVEGFGWAPIFNQIINSCHTSITVNFTPFPFFILPRSLRFSVSATNTEAVHDSLADFLPQDRYYRFNPNIENVSIDEVGIRPEKLAYLKATAKEYFQDPRNKERLDQL 912          
BLAST of mRNA_P-littoralis_Contig122.16.3 vs. uniprot
Match: A0A6H5KSL4_9PHAE (PNPLA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSL4_9PHAE)

HSP 1 Score: 296 bits (758), Expect = 4.020e-78
Identity = 156/335 (46.57%), Postives = 215/335 (64.18%), Query Frame = 1
Query: 3031 ANKCLASLGAHEWRPKMVGQKGLRILCFDGGGTRGVLTLALLKHVEKALGGRQPHEVFDMIVGTSTGGIIAGLAGVKCFPVAECEKMYDNLINKIFIKRPGGGMKLALKQASSGAFYDEVGWMKILDSILGDQLMVDSAQDPLRPMIVCPSTIISSNPAKVMLWRNYNYPPGHQSRYYGSFRHMVREAIRATTAAPTFFAPLMINGALYSDGALLCNNPSAVAFHEAKHLFPGVPVEMIVSLGTGCFFEEKKEFLEPAALGWDGIINQVIASATETEITTDIVSDLLPPELFFRFNPRMKDMPIDEVRKERLDWLKTLADEYFETPENQARLQEM 4035
            A+K L+ LG H W P+  GQKGLRIL  DGGGTRGVLT+ALL+ V K L  +  HEVFD+I GTSTGGI+A L   +   +A    +YD+LI KIF K      KL L+QA     Y    W  IL+ ILGD+ M+D+   P  P +V  STI++ +P ++MLWRNY Y P  +  Y G +R  +RE +RATTAAP+FF PL+    +Y+DGA L NNP+++A  EAK L+P VP+E ++S+GTG +   +KE      + W  ++NQ++ SAT+TE    ++   LP + +FRFN  ++   IDE R E+LD LK LA EY + P+ +AR +E+
Sbjct: 1228 ASKLLSMLGVHHWTPRQPGQKGLRILSLDGGGTRGVLTIALLREVLKGLD-KDVHEVFDVICGTSTGGILAMLFASEKQSLASATTLYDSLIVKIFKKDLLANAKLVLQQAQ----YSSTDWEAILEDILGDRRMIDTMTLPNNPKVVICSTIMNVDPLEMMLWRNYGYRPEQEPPYKGDYRRKMRECVRATTAAPSFFTPLVDGNMMYADGAFLANNPTSIALTEAKLLYPNVPIECVLSVGTGFYVPTRKE----PGMSWGTVLNQLVNSATDTEGVDSMLKTFLPRDQYFRFNAPIQPFDIDETRVEKLDELKALAKEYTQRPDIKARAEEL 1553          
BLAST of mRNA_P-littoralis_Contig122.16.3 vs. uniprot
Match: A0A4D9DA09_9STRA (PNPLA domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DA09_9STRA)

HSP 1 Score: 288 bits (738), Expect = 2.570e-76
Identity = 165/397 (41.56%), Postives = 231/397 (58.19%), Query Frame = 1
Query: 2848 ALELTFRLIMSGDAALDALKVDENLVTALKRVAEGGGQRFQYDAKGVLRRVGPRLSHSQLLANKCLASLGAHEWRPKMVGQKGLRILCFDGGGTRGVLTLALLKHVEKALGGRQPHEVFDMIVGTSTGGIIAGLAGVKCFPVAECEKMYDNLINKIFIKRPGGGMKLALKQASSGAFYDEVGWMKILDSILGDQLMVDS-AQDPLRPMIVCPSTIISSNPAKVMLWRNYNYPPGHQSRYYGSFRHMVREAIRATTAAPTFFAPLMINGALYSDGALLCNNPSAVAFHEAKHLFPGVPVEMIVSLGTGCFFEEKKEFLEPAALGWDGIINQVIASATETEITTDIVSDLLPPELFFRFNPRMKDMPIDEVRKERLDWLKTLADEYFETPENQARLQEM 4035
            A+E+ F+L+++ D A+   + D  L  AL+          Q  A G+     P  +      +K LA+LG +EWRP+  GQ+GLRIL FDGGGTRGVL++ALLK V K +G +   E FD+I GTSTGGI+A L G++   V E E +YD L++KIF   P   +    K     ++YDEV W ++L  +LGD LM+DS  + PL P + C S  + +NPA + +WR                         ATTAAPTFF+PL    A Y DGA L NNP+AVA +E + L+PGVPVE +VS+GTG   + +K        GW+GI+N +I  AT TE+T   +S  LP   ++RFNP+ +  P+DE + ERL  +K++A EYF   EN+ R+ E+
Sbjct:  880 AVEVLFQLVLASDKAISLAQKDGRLWNALQ----------QMTADGMYAAGSPTFA----TCHKLLAALGHNEWRPRQPGQRGLRILSFDGGGTRGVLSVALLKQVMKRVG-KDVFETFDVICGTSTGGILAVLFGIERRTVDEAEALYDKLVSKIFASSP---LIQTTKLLLRTSYYDEVVWEQVLQDMLGDDLMIDSMGEGPLSPKVFCASLSLKTNPASLYIWR-------------------------ATTAAPTFFSPLEREDAKYCDGAFLANNPTAVALNEVRTLYPGVPVECVVSIGTGVHVDNRKA---DGGYGWEGIVNDLINCATNTEVTHQTLSAFLPKSKYYRFNPQTEFFPLDETKPERLARMKSIAREYFWQSENKERMNEL 1230          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig122.16.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNE8_ECTSI0.000e+055.55Novel protein n=1 Tax=Ectocarpus siliculosus TaxID... [more]
A0A6H5KXR6_9PHAE0.000e+071.55PNPLA domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A835YX58_9STRA1.060e-14366.16Calcium-independent phospholipase-like protein A2-... [more]
A0A0G4F2X6_VITBC6.930e-9647.60PNPLA domain-containing protein n=1 Tax=Vitrella b... [more]
A0A4D9CW07_9STRA1.430e-9443.33PNPLA domain-containing protein n=1 Tax=Nannochlor... [more]
A0A7S2R4X2_9STRA5.240e-8839.25Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
D8LL86_ECTSI1.350e-8446.95Similar to Calcium-independent phospholipase A2-ga... [more]
K8Z805_NANGC3.480e-8340.53Calcium-independent phospholipase a2-gamma n=2 Tax... [more]
A0A6H5KSL4_9PHAE4.020e-7846.57PNPLA domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A4D9DA09_9STRA2.570e-7641.56PNPLA domain-containing protein n=2 Tax=Monodopsid... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig122contigP-littoralis_Contig122:77482..94280 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FNE8
PFAMsNB-ARC,Patatin,TPR_10,TPR_12
Model size4166
Max annot lvl2759|Eukaryota
KEGG koko:K16815
Hectar predicted targeting categoryother localisation
Exons21
Evalue0.0
EggNOG OGsKOG4231@1|root,KOG4231@2759|Eukaryota
Ec32 ortholog descriptionPatatin/Phospholipase A2-related
Ec32 orthologEc-22_001470.1
Descriptionphosphatidylethanolamine catabolic process
Cds size3867
COG categoryU
BRITEko00000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789526.0606518-UTR-P-littoralis_Contig122:77481..775701680789526.0606518-UTR-P-littoralis_Contig122:77481..77570Pylaiella littoralis U1_48UTRP-littoralis_Contig122 77482..77570 -
1680789526.282829-UTR-P-littoralis_Contig122:93625..937661680789526.282829-UTR-P-littoralis_Contig122:93625..93766Pylaiella littoralis U1_48UTRP-littoralis_Contig122 93626..93766 -
1680789526.295085-UTR-P-littoralis_Contig122:94211..942801680789526.295085-UTR-P-littoralis_Contig122:94211..94280Pylaiella littoralis U1_48UTRP-littoralis_Contig122 94212..94280 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789526.0738304-CDS-P-littoralis_Contig122:77570..776451680789526.0738304-CDS-P-littoralis_Contig122:77570..77645Pylaiella littoralis U1_48CDSP-littoralis_Contig122 77571..77645 -
1680789526.0825486-CDS-P-littoralis_Contig122:78528..786961680789526.0825486-CDS-P-littoralis_Contig122:78528..78696Pylaiella littoralis U1_48CDSP-littoralis_Contig122 78529..78696 -
1680789526.0928235-CDS-P-littoralis_Contig122:79918..800381680789526.0928235-CDS-P-littoralis_Contig122:79918..80038Pylaiella littoralis U1_48CDSP-littoralis_Contig122 79919..80038 -
1680789526.1038456-CDS-P-littoralis_Contig122:80517..806741680789526.1038456-CDS-P-littoralis_Contig122:80517..80674Pylaiella littoralis U1_48CDSP-littoralis_Contig122 80518..80674 -
1680789526.1148663-CDS-P-littoralis_Contig122:81000..811851680789526.1148663-CDS-P-littoralis_Contig122:81000..81185Pylaiella littoralis U1_48CDSP-littoralis_Contig122 81001..81185 -
1680789526.136473-CDS-P-littoralis_Contig122:81624..818251680789526.136473-CDS-P-littoralis_Contig122:81624..81825Pylaiella littoralis U1_48CDSP-littoralis_Contig122 81625..81825 -
1680789526.1456676-CDS-P-littoralis_Contig122:82161..823501680789526.1456676-CDS-P-littoralis_Contig122:82161..82350Pylaiella littoralis U1_48CDSP-littoralis_Contig122 82162..82350 -
1680789526.1540456-CDS-P-littoralis_Contig122:83255..833301680789526.1540456-CDS-P-littoralis_Contig122:83255..83330Pylaiella littoralis U1_48CDSP-littoralis_Contig122 83256..83330 -
1680789526.1620038-CDS-P-littoralis_Contig122:84017..842211680789526.1620038-CDS-P-littoralis_Contig122:84017..84221Pylaiella littoralis U1_48CDSP-littoralis_Contig122 84018..84221 -
1680789526.1716945-CDS-P-littoralis_Contig122:86015..860691680789526.1716945-CDS-P-littoralis_Contig122:86015..86069Pylaiella littoralis U1_48CDSP-littoralis_Contig122 86016..86069 -
1680789526.1813784-CDS-P-littoralis_Contig122:86312..866591680789526.1813784-CDS-P-littoralis_Contig122:86312..86659Pylaiella littoralis U1_48CDSP-littoralis_Contig122 86313..86659 -
1680789526.1973484-CDS-P-littoralis_Contig122:86854..871641680789526.1973484-CDS-P-littoralis_Contig122:86854..87164Pylaiella littoralis U1_48CDSP-littoralis_Contig122 86855..87164 -
1680789526.2090025-CDS-P-littoralis_Contig122:88764..888931680789526.2090025-CDS-P-littoralis_Contig122:88764..88893Pylaiella littoralis U1_48CDSP-littoralis_Contig122 88765..88893 -
1680789526.2179384-CDS-P-littoralis_Contig122:89491..896211680789526.2179384-CDS-P-littoralis_Contig122:89491..89621Pylaiella littoralis U1_48CDSP-littoralis_Contig122 89492..89621 -
1680789526.2265236-CDS-P-littoralis_Contig122:90334..905431680789526.2265236-CDS-P-littoralis_Contig122:90334..90543Pylaiella littoralis U1_48CDSP-littoralis_Contig122 90335..90543 -
1680789526.2345395-CDS-P-littoralis_Contig122:90850..909281680789526.2345395-CDS-P-littoralis_Contig122:90850..90928Pylaiella littoralis U1_48CDSP-littoralis_Contig122 90851..90928 -
1680789526.24237-CDS-P-littoralis_Contig122:91333..918341680789526.24237-CDS-P-littoralis_Contig122:91333..91834Pylaiella littoralis U1_48CDSP-littoralis_Contig122 91334..91834 -
1680789526.2527938-CDS-P-littoralis_Contig122:91972..925421680789526.2527938-CDS-P-littoralis_Contig122:91972..92542Pylaiella littoralis U1_48CDSP-littoralis_Contig122 91973..92542 -
1680789526.2634175-CDS-P-littoralis_Contig122:93076..931751680789526.2634175-CDS-P-littoralis_Contig122:93076..93175Pylaiella littoralis U1_48CDSP-littoralis_Contig122 93077..93175 -
1680789526.2735076-CDS-P-littoralis_Contig122:93559..936251680789526.2735076-CDS-P-littoralis_Contig122:93559..93625Pylaiella littoralis U1_48CDSP-littoralis_Contig122 93560..93625 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig122.16.3prot_P-littoralis_Contig122.16.3Pylaiella littoralis U1_48polypeptideP-littoralis_Contig122 77571..93625 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig122.16.3

>prot_P-littoralis_Contig122.16.3 ID=prot_P-littoralis_Contig122.16.3|Name=mRNA_P-littoralis_Contig122.16.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1289bp
MPDGSLWEGLGSWEGLGEGLSGAFLFAQQGLEGLNILPGGADAFWMSFGR
MDVPELPVLSEIRLFGLSWPPPPWPSQTTGFSTAEKDGKLPQQRQPVAPP
SGAASTTPAAGGTEAAAGRGMDSEVVTRTGAGKERWELLSAWRRKRPAVT
AAVAVGGEDIGGDSGTEAAAATAAAGAVEGGGAEGTRRKVGGLAALRNRL
PLLGRGRGGGGGGGRRGRGSGRRGSGGSATVKGDVGSGGGGGSAPGEGSS
PPAAQPSSPPPGGRRGGAAGGKGSKNNKDKKDDDNKTEASKMLPLPATGT
ARSGEGSSSGPATGKDVRLSNQRGLADEPLRGETGSGTGGGGRVAGPKPK
EATAAAAAAAAAGKRNGQTALGGGGPEVAVGGAGGGHGDAAATAAAAGAP
VAAAAPTHFIPKFAPPPNAWKILSSKLPTEKEKEKEKESSNRSTNGSPDD
VFTSVASADRAASRLDETNDDDDDDDDEIDEFHDFGDVPLSVTRIPTPPD
MEITINRSSGTPANAETRSAAAAAAKAAVDSDNVLEEWVDGEPVEVHHGR
YREQPKRPADLSGTSVEMKLVEMACLSGLSSSAGKSAGRIMHEELGFGHL
LRGLREDVRPSLRRRVLQAISAVVDSDPSLAPHLLGIDHNPDGDVSAARS
KTKEKKSSSSSSSSRLAAAAAAAASSITKGREGRNKKAGAGGGKPGSRVG
VGAVAAVVVGEDDLLECITAILGYHSVAGVGGGVGGGVGGGVGGGGGGGA
VGVRVEGSGGLVGRVFRAVAELLPVPRVWPFLSAAAAAAAAPAAVTTTAA
SAAAGSPAGDDDMEKERDEVANEGRDWWKDEVAIEEERLEQQAAAGGTAI
GDRVRGGSGWVWWGRGRSRRASRERLVEEALELTFRLIMSGDAALDALKV
DENLVTALKRVAEGGGQRFQYDAKGVLRRVGPRLSHSQLLANKCLASLGA
HEWRPKMVGQKGLRILCFDGGGTRGVLTLALLKHVEKALGGRQPHEVFDM
IVGTSTGGIIAGLAGVKCFPVAECEKMYDNLINKIFIKRPGGGMKLALKQ
ASSGAFYDEVGWMKILDSILGDQLMVDSAQDPLRPMIVCPSTIISSNPAK
VMLWRNYNYPPGHQSRYYGSFRHMVREAIRATTAAPTFFAPLMINGALYS
DGALLCNNPSAVAFHEAKHLFPGVPVEMIVSLGTGCFFEEKKEFLEPAAL
GWDGIINQVIASATETEITTDIVSDLLPPELFFRFNPRMKDMPIDEVRKE
RLDWLKTLADEYFETPENQARLQEMAEKMLSDSYVEIV*
back to top

mRNA from alignment at P-littoralis_Contig122:77482..94280-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig122.16.3 ID=mRNA_P-littoralis_Contig122.16.3|Name=mRNA_P-littoralis_Contig122.16.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=16799bp|location=Sequence derived from alignment at P-littoralis_Contig122:77482..94280- (Pylaiella littoralis U1_48)
GGGGGTCGGACGTTGGACGCGTCGGGAGTTGCATGCCGCGCGGTGGTGGA AAACCAGACACCTGGGCAGGTAAATGGGATGTTAATGATGTACGCGTGTT GTTTTGACACCGTGTTGTGCTTTTTTTTATTTTTCGTTCCTTTGTGCCAG GCGGGGCAACAGCTTGCGCGCTTGCGCGTTGTGCGGTGTCAAAACTTTTT TACGATTTCACGCTGAGATTTGATCGTTTCTCCTCTGCTCCTGTGAGATA CCACGGCGTTACAATATGTGCGCGTGTCATGTTTACAACGTGTGTGTGCA CCTATTTTTAGCGATCGAGCTCTATGATAGCTAGGCTAGAAAAAATTGGC GTGCGTGTGCGGCGTACGCCATCGTACACGCACGCTTCTTTGTTCGTTGC TGTAGGCCTCTCGCACCTACGCCTATTCTCTCTCCTTTCCACCCACGCTA CTACCGGCTGTATTCGTATATTTTGTCACAAAAATAAATCGTTTGATCCA AAAACCACGCACAGCACTCTGGCCCAGCGGACTCTGTCATCGACCACGCG TCCGACGAAGCCGACGAGTCACAACGAAGAACCTCCACGGCGCACGCTGA CGGAAGGCGCGCCAGCAGGCACGGCGGCGCTGAGGAGGCGGCGGCGGGGA AAACCATGCCTGATGGCTCGCTGTGGGAGGGCCTGGGGTCATGGGAGGGA CTCGGAGAAGGACTTTCAGGGGTAAGCGAGGGATAGGCGGGAAGGGACAA GAGGGAGAGGGAGAGAGATAAGAGAGATATTTTATGGTTTCGGTTGTCAC TCGCGTATGATACCCCTCGAGCTCCAAGTTCGACATCTCCTCTGGTGGAG CCCTTTCGGAAATCAAGGGGGTAAGGGCCAGGAAAATCTCTTCTGGTGGA GCCCTTTTGGAAATCGAGGGGGTCAGGGCCAGGAAAATCGGGCGAGGGGA GAACACACGGTAGGAATGCAGCTTTCCTTACACAGGCGCGAAATGGATAT TTTTAGACCTCTCCGGCAGGCCATCATATAACGGAAGCTTTACCTGTCTT GTCATTGTTTGTGTGTTGTACTGTACGTCTTTTCGGTTTCGACGCGATAA CGCAGGCCTTCCTCTTCGCGCAGCAAGGGTTGGAGGGGCTGAATATCCTC CCGGGAGGCGCCGATGCCTTCTGGATGAGCTTCGGGCGGATGGATGTCCC AGAGGTAAATCGCATGTTTTTCTACAAGTGTGTGCGGCGCGAAGCGATAG CCCTGCTGGCTGTCGTGACATCAATGTGGCGCGATTTTCGCACCCCACCC CCCATCCCCATGTCAAGGTTGCTCTGAAGTTTAGACGGGGCGATTGGTGC ATGCATCTCCGGCCAGCTTATCGTAGAGCTTGTGCGCCGAACCGGTAGCA TACCTCTAAAGTACTTTCATACACCAGCCTTGGTAATTTGGTGTTGTTGC GTGTTTTGGGGGGTGAAGCACCCGCCGTGCGCCCCGCCTTCCCGGAAAAC GGTCTTAAAGGGGACCCCCCCCCTTGCGCGCTTTAGCACAACGGCTGGGT GACGCTTAGGCTACCCCTTGCACCCCCTTCAGGCCACCCCTTCCATGGCT CCGAACCCTTTTGAACGACAACAAATCCCTGCCGGTCTTGTGCTTTTTTA TTTTTATTTTTATTCATTTCCTGTGCGTCGTTCCGTTCTTTTTCGTCTCG AAAATAATCGTGACATGAAACAAAAAAAAATGCAACAGCTCCCTGTCCTG TCCGAGATCCGGCTCTTTGGGCTTTCCTGGCCGCCGCCGCCGTGGCCGTC GCAGACGACTGGATTCTCCACCGCCGAAAAAGATGGCAAGCTACCGCAAC AACGCCAACCCGTGGCACCGCCGTCGGGAGCGGCGTCGACCACGCCAGCG GCAGGGGGAACGGAGGCGGCGGCGGGTCGGGGGATGGATAGCGAGGTGGT CACCCGGACGGGGGCGGGGAAGGAGAGATGGGAACTGCTGTCTGCGTGGC GCCGAAAGCGGCCGGCCGTGACGGCGGCGGTTGCCGTTGGCGGGGAAGAT ATTGGCGGCGACTCGGGCACCGAAGCGGCAGCAGCAACAGCAGCAGCGGG AGCGGTCGAGGGAGGAGGGGCCGAGGGGACGCGGAGGAAGGTGGGGGGGC TGGCGGCGCTCAGAAATCGGCTTCCATTGCTTGGTCGAGGCAGAGGAGGG GGCGGCGGTGGCGGGAGGAGGGGGCGTGGCAGCGGCCGGAGAGGTAGCGG CGGCAGTGCAACGGTGAAGGGCGATGTTGGTAGTGGCGGTGGAGGAGGGA GTGCTCCGGTTGTTGAGCAAACGGTCGGGGTGGGATTGTCATCCGACGCG GTGCAAGTTCAGCGGCAGCAGCAGAAGCAGAAGCAGCAGCAACAGCAGCA GCAGCAGCAGCTGAAGGACCAGCGCCGCGCGAGTTTGCGAGCCGAGGGTG AGGGCAGCAGCCCTCCTGCGGCGCAACCCTCCTCGCCCCCCCCCGGCGGG CGCAGGGGCGGGGCCGCAGGGGGCAAGGGCAGCAAGAACAACAAAGACAA GAAGGACGACGACAACAAGACTGAAGCAAGCAAAATGCTCCCGCTCCCGG CGACTGGCACGGCAAGGAGCGGCGAAGGGTCTTCCTCGGGGCCGGCAACG GGAAAAGACGTCCGTCTTTCGAACCAGCGCGGGCTCGCCGATGAGCCGCT GCGCGGCGAGACCGGAAGCGGGACCGGAGGGGGTGGCCGGGTGGCCGGGC CAAAACCCAAGGAGGCAACGGCGGCGGCCGCGGCCGCTGCTGCTGCCGGG AAGAGGAACGGCCAGACAGCGCTTGGCGGTGGCGGTCCGGAGGTTGCTGT CGGTGGCGCCGGCGGTGGCCATGGGGATGCTGCTGCCACTGCCGCTGCTG CCGGTGCTCCCGTTGCTGCTGCGGCTCCGACACATTTCATTCCAAAGGTG CGTTTAGTTGGGATTATCATCTTCTCCACCTTTTTTTTTCGAGCTCCTGT GGTACCATCTTACATAGGGTTATCACGTACAAGTACATTAGTATTTGTTT ACAATGCGCTCGAAGTTGGTGGTGATCCAATGGTACCGTGCAGTACTTAA TCTAGCCCGCCGGCGCCCCCGGCGGCCCCCCGCCTCCCGCCCCCCGCCTC CCCCTCTCCCCCCTTGTCTTCCCCAGAGGTACTGACTGTGTTGCCGGACA CCTTTAAGACAGTGTCAAACATCCTAATTTATATTGCCCCCCCTCTCCCG CTCCGTCAAAAAAAGGATGAGTTATCAATGGTGACTATAAAGCAACGTAA GACCCAATAAATACGTGAGTACCCCCCCCCCCCCGCCCCCCGATCCCCAC AGTTTGCACCGCCTCCAAACGCCTGGAAAATCCTGTCGAGCAAACTCCCG ACGGAGAAGGAGAAGGAGAAGGAGAAGGAGGTGAGCACGTCGCCCAAAGA CTTAACCGTACGTACACGAAGACCGAGCGTGTGCGACGACTACTGCTGTG CTCGTAAATGCATCTACTGCTTGCTGTACCTGGTAGTCACTGCGTGCTTA AAAGCACGATACCACCTCCGAGATGCTCTTGTCATTCTTCTTGTAATTTC GTCTCTCCACCCACTCTGCTGTGGAAGATCTCAATCGAAACGCCTATTTT TGTCGGCGGGTGCGGGGGGGGGGGCGGGGCTTCTTTACCGAATGATGCAA AAAGCAGCAGCAGCAGCAGCAGCAGCAGCGGCGGAAGTCCTCAAACCGAT CCACGAATGGGTCCCCGGATGATGTATTTACTTCGGTGGCCAGTGCCGAT CGTGCGGCAAGTCGACTCGACGAGACTAACGACGACGATGATGACGACGA CGACGAAATCGACGAGTTCCATGATTTTGGCGACGTTCCACTGTCGGTGA CCAGGATCCCGACACCGCCGGATATGGAAATAACCATCAATCGGAGGTGT GTACAATGCATGCTTATTTTCAGGCTTATTTTGGTGTTGTACTCTCCTCC CTTGGGTATTGGGGGGCAGGGGCACGTGAGTTGAGTGAGGACAGCCTTGT GAAATAAATCGTTTTGTATCGTTTTGTCCCACCCACTGCTACCACCAACG TTCTGTAGTTGTGCCTCCCATGATGTGTGGTCGTTTTTGTTGTTCTTGTC CTTGCCTCCAAGTCGTTATCGCTTTTGTTGTCCTTGTCCTTGTTCTTGTT CGTGTCTGTGTGGACCTCACTCGTCCTACAGGCAAAGGGTAAAAGGGCTG TTGAGACAAGATGTGAAATGTCTAATGTGTGTTTTGCTTTATATCCCAGC AATAGACCGCGCGCGCGGCGCACGAGTTCGTGGTACTACTGCTGTACTGT ATAAGGGGTCTCACGCGGGTGTGTGTGCGTGCATGTGGGGGGGCAAAACA GTGACTCGTCGTCGCGAACACACCGATATCGCGAGAGCAGGGTGCATGTC AGCGTGTACGTGCGTGCGTGTGTGTGTGTGTGTGATTATTCGTGTCACGT GTCAGTGTTGGAGACGTCGATGGGTAAATGCGTCAGACCAGCTGTAACCC AATCCCGGGACTGCTGTCCACCCCCCCCCCCCCATTCCTCTCTTCCCGCG CCCCTTGTTCTGTGTGTGATTGGCGGAACCCCCCCCCCCTTCCAAAATAA AAAAAAAAGTTCGGGAACCCCGGCGAACGCAGAGACTCGTTCCGCAGCAG CGGCTGCCGCAAAAGCTGCCGTCGACTCCGACAACGTCCTAGAAGAGTGG GTTGACGGGGAGCCGGTAGAGGTGCACCATGGGAGGTACGTGCTACAACA CTATTTGCTTCTCCCCCCCCCCCCCGATAATTGCACATGTGCACGTGCCC TGTATTGTAAAAAAGAAATGTAGTTCAAATTTGTATCATGACCGTGGGTG GTGAATGATTAAAAGTTAAAACTTCTTGCCCACCCATATCTCGTCTTTTT GTCGAGAGTTTCATTGGCACGAGTGTCCGAGAACATCATGCACTGGACAC ACATCATGTGCACACGTTATCCCCGACTGAAAATGCACGCTCACTCACAC AGTCCTCTCCGTCACTCACTCGCTCACTCGTTCACTCGCAGCTTCAGGAA AGCTAGCGAAACAACAACAACAACAACAACAACAACACACAGAAAAAATT TCAAGTCTCGCGCGCGCAATGTTCAATATTAATATTCCAGCAACCCCCCC CCCCCCCCCCCCTCTCCCCGGGTTTTCGCGTCTTTCTCGTGCACTGTCCA TTCCATTCCATCCCATCCCATCCCATCCCATCCTATCCCATCCTATCCCA TCCCATCCCCAATCTCGATATGCCCGTCTTTTTTGGGTCTCTAATATTAC TTCTCTTGATGGTATTTGTAGAATGTCTCCCAGGAAGCGGGAACAGCCAA AGCGCCCCGCAGACCTGTCCGGCACTTCCGTGGAGATGAAGCTGGTCGAA ATGGCGTGCCTCTCGGGGCTGTCGTCGTCGGCGGGCAAGAGCGCCGGCCG CATCATGCACGAGGAGGTGCGTGCCTACCGCTCCTGCTTTTGCAGTGTCG TTTCTGGTGTCGTTTCGAGCACAAAGCTGTTTGTAGTGTCGTTTCGAGTG TTTCAAAGCGGGTCATGACAGCGCCGAGCGCGTGTTTTAGATGATGTGCA ACGGGCCACTGCTATCGTACAGTTGTACTGCTGTGGTATCATGAACTGTC AAGCGTCTGGCTGTGTACTGCTGTTCTTGCACAGCAGGAATAGTGGTACG ACCGTCCGTGTGGTGTCGGTGGAGTACATCTGTGATAGCACCAGATCCAT GTTTGGGGCTCCTGCAGCTTTTGTCGTACAGGTACGTACATATGTTCGCG TAGCTGTCGGGTCTCCGATTTTCCCTCCCGAGGGTTGCAATTGACCCCTG TGTTTGTCGCTTGATTTTGCCTCTTGTCGTTCTGTTTTTTCATAATGTCA GAGAGAAACGGAAAAAGCTAGCGAGAAATTCAGTTGCAGTGATTGATGAC GGAATCTTGAATTTTGAATCTTGTGGTTTCTTCCCCACGTGGGGCCGTCC TTGGAGACTCTACCGCCGGTGGTACATGCTATGTACGAAGTAGGACGTCA GGCAGCAGTACGATAGTTCGGTGTTCGATTCTCCCCCCTTTGTGGTTGTC ACTTTCGGATGGCATGGTGCAACAGCAGCGGTGGCGGTACTTCTCGCGAA GGTTTTGTAAAAGCAGCCGGCACATGCGACATGAAGCAAGAAGAGCTGCT ACACATACATACGTACGACGTGAAGTAAGAACAGCTGCATCACAAGTGCA CGAAGACGAGACTGCTGTCATGATTGCCAAAGTACGCGATTGTTACCTCA GTAAAACAGTGCCCGTTGGTTCTCCATCATAATTCCGGAGGAGCCATGCC TCAGCATTACATTGTACCAGGTTTTATTATATTGTTGGGAATCTGGTACT TGAGGGCCCCGCCTAAAAAAAAAAGGTACGAAGTAATTGTACTCATGTTG TACGAAAGGTTGCTTTTTGCGGGGTCCTACTGCTGTTTTTGGTTGTTGTC GGGGCCTCGAGTGTTGGATGTTCTTTGAAATGTTTTTTGAAGTGAGGCAC ACGCGCGCGCAGGCCGTGTTTGTTCACTCCACTTCATCACCCAAAGCTTG CCTCAGTCTTTTAGCAGTCAAGGCATTCTTCCCATCCCGTTCCATCCGAG GCTCACTGCACCTCTTCTTTGCACCTCTGCTTGTACGCTGTACGCATGCA ATAGCCGACGATAGCTGCAACTGCGAACGCTTTGAGACCCAAGATTGCCC CTGCAAGCATATTTCGTCGGATGTCTTGTATTGACTCCATATTTGTTGCT GCCATGCTGCTGCAGAACCAACTTTCGCTGAAGGATAGTTGGAGGTATAT TCCAGGACAGAACGTCTTGCTGCTGTTGCCGGCGTACTTTTAGCTGATGA TGATGTGTGTGTGAGAGAGAGCGGGTGTGTGTGTTCATCCCATTCATTCC ACACACCTTGATGTATTTCGTATGAATTACTCCACAAGCCTTGCTGCTGC TGCTGCTGCTGCATGCACACTTCTGTTCTGCTTGCCGATACTGCTGTGTG CTTCATCCATTCCCAGCTAGGATTCGGGCACCTCTTGCGCGGACTCCGAG AGGACGTCAGGCCGAGCCTTCGTCGGCGCGTCCTCCAGGCTATCTCCGCC GTGGTCGACAGCGACCCTTCCCTCGCCCCTCACCTGCTCGGCATCGACCA CAACCCTGACGGCGACGTTTCCGCTGCTCGAAGCAAGACGAAGGAAAAGA AGAGCAGCAGCAGCAGCAGCAGCAGCAGGCTTGCAGCAGCCGCTGCCGCC GCCGCTTCTTCCATCACGAAAGGCAGGGAGGGCAGGAACAAGAAGGCCGG CGCCGGCGGCGGGAAGCCCGGCAGCAGTAGCAGCAGCAGAGTCGGTTCTC TGTCTTCTAGTCTCGGCGGCGGGGGTGCCGGTGGGGTCCGGAATAGACTC CAAGGGTTCTCTGCAAAGCGGCGAGGATGGCGTGGGCGGCGGCAGCGACT ACGGAGGCCTGTTGGAGGAGGCGTAGACGGGGCGCCAGCGCCCCTCTGTG GTGCGGGGGCGGGGGGGTTAGGGGTGGGGGTTGGGGCTGTCGCCGCGGTG GTCGTTGGCGAGGACGATCTCCTCGAGTGCATCACCGCTATCCTCGGCTA CCACAGCGTTGCGGGCGTCGGCGGCGGTGTTGGGGGCGGTGTTGGCGGCG GTGTTGGCGGCGGCGGCGGCGGCGGTGCGGTAGGAGTGCGGGTCGAAGGA AGCGGCGGTCTTGTCGGGCGTGTCTTTCGCGCAGTGGCCGAGCTCCTGCC GGTGCCGCGGGTTTGGCCTTTCCTTTCCGCTGCTGCCGCCGCTGCTGCTG CTCCTGCTGCTGTCACCACCACCGCAGCCTCCGCTGCTGCAGGGAGCCCC GCTGGTGATGATGACATGGTGGTTCAAACGCCACCGCTGCAGCAGCAGCA GCAGCAGCAAGAAGGAGCGAATCCTTCCGAAGTCGCTGCGTCGGCGACGG CCGGAGGGGGGCACGGCAGCAGCAGCAGCACTAGCAGCAGTGCTACCGGT GACCGACGAGCAAGCCTCCTCCAGACGGGGGCGAAAAAAAAACGGGACGA GGTGAAGGTCAAGGTGAAGGTGGCGGCGAAGATGACGGAGAAGGAGAAGG AGAAGGAGAAGGAGAAGGAGAGAGATGAGGTTGCCAACGAGGGTCGCGAC TGGTGGAAGGACGAGGTGCGTTATTTCATGTACGCCAGCGTAATGGGATA TCCTTGCCCCCCCGCGGACCGGTTTTTGGCGCTCAAATGTCGTTCTCCGT AGCTTATCGTTGTTATCCATGGCGTATACTACTGTAGAGTCGCGCCACGA CGTACAGTACCCAACAGGGCACGCTTTTTCCGGGCAGCTCTCGGCGAGAT AGTTCAATGGCTTTCGGTGCTGGCGCTTCATCGTTGCTGTACGTCAGTTT TTGCCGCATGTATACGTGGTCGTTCTCGCGGGGAGGATAATGCCGTGTTG TCGCATGATCATGAGATACGACGGCGTGTTTGTCGCGGAGGGAAGGGAAG GGAAGGGATCCCCCTGGGCCGGTCGATCCATTTTCAATGCTCGTGTGGGG TGGCATGACAAACAAAATAAAGTGGATGAAATTATTTTGATTCAAAACTC AAACTCCACCAGCGTCCTGGGGCGGATATGATCTACGATGGATGAAGAAG CCGAAGTCCGAAAAAGGCGGCCGATGTGAACAAAAAAGGGGGGGAGAAAC TGGAGTGGTTAATTGCGTTCGTGCTTTGCTCAGATTCAGTGCACGAGCTT CCCTGGTACTACTACTACACAGCTCCCGCAGCAACGACCCCCGTGCCCGT AGTCCTTTGGCGCACCTACTTGGCACAACACCGTCCATCATCGGTCCCTT CGGTGCTGCTCCTGGCTGTGTTGCTCTCGCCGCGGCGGCAAGAGGAGTAT TTGCGCCGACAGCGAGTTGCTCGTGTGTTGGGAACTGCTGCTGTGTGGTG GAGGGGGGTTTGCTGCTGTGCGACGGGCCGATTGGTTTTTTTTTCGGCAG CGAGAGCAGTGTCAGTGCCAGAAAACGGTTGCTGGTGTTGGAAGTATAAG CATGTCGCCGCAGAGGGTTACAAGCATTGCTGCTGTATACAGCTGTCCGA TACGTGTGAAGGCGTACGATACGGTCTCCTTTTTTTTTCTTTCTTTTGTT GAGATTACTGCTGTATCAGATTCTCAGATATACATACTTCGAAGTACTTC GTATCCTTTATAACTTGTACTCCGTACTTCGTATTTATGTATTTATGTTA ACTTCATTCCTTTTGTGGGACCAAGCCCGGCTGATTTGGCCACATATCCC GAGAAAGGTGTAGAGACTGGCGTCCAGAATAGATGAAATGACAGCTCACG CACGCACACGCACAGACTCTTTTTTGTTTTCCCGGAGCGATCGAATTTCT TTGAAACGTCCCATATAGGTGTACGATTGTGTTATATTTGACGTTTATAA ATAGTTGTATGAAACGTGCTAGTTTCTGGGGTAGAAGACCGGCAGCCTTA CAATCCGTGGCTGATGTTTTTAATCATTACCAGGTAGTCACCTTGCTCAG GAAGGCGTGTTTGCTGTTTCGAGTTGTGCCAGACGTCGCTTCGCTTTCCC TCACAAAAATACAGAATACCCGAACGGAAATCCTTTTTTTTTCGTCGATG ATCTTCGATCCTCATTTCACGTACTCGTACAATGCGCATTTTGATCTATA GACATGGGAGCTTTAGCGTGTTGAGTTCTAGAAATAGATGCTTTTCTGCA TGCACAGCAGTCGTAACATTGAAATTCAGATTTTCGTTCTTCCGCCCGTG GAGGAGTAAATTTGTTCCCGACGTTTTGTTGCGACTGGTAGGTGGTAAAA TGATTGGGGGCATGAGAAAACGTAACCCTTGCCACAGAAGCCCAATCCTG CCGTGTATCTACCATCTGCGTTACCCCCGCCTCCTCCTAACTCTCTTCCC CGGCTTCAGGTGGCCATTGAGGAGGAAAGGCTCGAGCAACAGGCCGCCGC GGGGGGCACCGCGATCGGAGACAGGGTGCGGGGGGGGTCCGGCTGGGTCT GGTGGGGCCGCGGCCGTAGCCGTCGGGCGTCGAGGGAAAGGCTGGTGGAG GAAGCGCTGGAGCTCACCTTCCGGCTTATCATGTCGGGGGACGCGGCGTT GGATGCCTTGAAGGTGCGCGGCAGAGGGTTTATTCAGGTAGTCATAGTGA CGTAATCGCGGCGTTGGATGCCTTGAGGGCGTGCGGCAGAGGGTTTGGGT AGTCAAAGTCACGTAATCGCGGCGTTGGATGCCTTGAAGGTGTGCGGCAG GGGGTTTAGGTGGCCATAAGTCACGTAATCGGTTGATGGTCGTAAGATAG TAGATGGTTGACCAGAGAGTAGATAGTTGTCCGCGAGCCGTTCATCTAGA TAAGAACAGAACTACAACGCGGCCGGCTGGCTGGCTGATGTTTATTTCCC TTGTTGGTTTTCACCTAATGGTTTGTTCAAGCTGGCTGGCGTGCAGAAAG TCACTTGGAAATGTATGTCTGTAACGTTTGGTAAACGTTAATTCTCATAC TTCGTATCATACATACCGGGTGTGAATTTTTATTTTTTGTCTCTCTAATA TCGTAGTATCGTCATTTTACGTGTCTTTTTCGCACGTTTCGTTTTGGTTT TCATGTGTCTAATACTAAGTACTCCGGAGTACCTCGTATCATTTGACGTA CTTTGTACTTGTACTTCGTATCGTATCATACACATGATAAGAAGCATATA CTTGTACTGGTATCATATGTATGAAGTTTTTTTTTTCTTTTTTTTCTCCT CCCGCGCTCTGTCCGTAATTACGGCCGCTGCGGTGCCTTCCTCGGAAAAG GTGGACGAAAACCTGGTAACGGCGCTGAAGAGGGTCGCAGAGGGCGGGGG ACAGCGTTTTCAGTACGATGCCAAGGTCAGCTCAGACAGTGTCATGGATC TTCCAAGCTGTAGAGTATATGGGTACAAACCCTCTACAAAGCAGCACAGC AGTAGCAGCAGTATTTAGTATCGTCCGCGTCATCTCCGTGTCGTACGGCA GTCGGCGAGGTACCGCAGCGTATCACCTCGCTCTAGGACATTTCACAATC TCATGGTCTTGCCACCGTCGCATGGCTCCATCCCTGTAGTTGCAAAAATG TGGTCCGCGTGGTACTACCGTAGGGGGAACACTTCTGAGTTGGAGTGCAT TTCCATCACCATGGCGGGACCGGATATCACACTTCGATGTCTCCGCACAA ATGCGGGCGCTATAGTACACAGCAAGCAACTTCGAAACATCTCAACCAAT CCCGCTCTTGTTAGTGCTGTTAGTCATTTCGCTGTTGAGAATCCTGGTAT ACTTCGTATATCTACAGGAAGCACTGTTGTAGCTCTGGAATATGTATCTG CCCAGCGGATGTGACGTGCATAATACGTCAATTATCAAACAACTACTTCC GTACGGTAGCCTGATCCTCACCCAGCCTACCGTTCTATGCGTTGAGACCC CCCACCCCCCCACCCCCCTCAAATACCGATTTTCGAAAACTCGAGTATGC CTGCGTAGCGACAACTGTTGCCAATACCGAATCGACATATTTTCGAGTTT CAACTTTCGACCACAAAACCATTGATTTTGTTTCGAAGCAAGCACAGGAT GTCCATACTGTACTGTATACTTGTGTACGTTATCATATGACATGCGTGTT GTGCATTATGTTTGGTACACATCTACCTGGCAATTGGTTGTTCATTAACC TCATTCTATCGTTGTTCCAAGCCAAAATAGTCATCCAGACCGTTTGTTTG GAGGATGACACATATAAAACTGATCCGCAGGGCGTTCTTCGGAGAGTGGG CCCTAGGCTCTCCCACTCCCAACTCCTCGCCAACAAGTGTCTCGCGTCCC TGGGCGCGCACGAGTGGCGGCCGAAGATGGTCGGCCAAAAGGGGTTGAGG ATCCTCTGCTTCGATGGCGGCGGAACTCGCGGCGTGCTCACGCTTGCCCT CCTCAAGCACGTCGAAAAGGTATGACTTGCGGGGGGGGGGGGTCGTAGGT AGGAGGTAGGGTAGGGGGGGCGTACCAATCTGCCGCTTGCCTTTTTCGTC ATTTGATTAGTGATGATCATGCATCCCTGTCGATGCGGAGCGCCGCCGCT ACTCGTAGAAGAGGCAACGCCGTGACAAGGGCAGGGGACAGGGACGCGGC CGGGACTGGGTGCGCGCGTTGGGTACGGTACATAAACTCGCATTCGCTCG TGCCCCCAACAACTAGAAATGCTTGGTGCAAACTTGAATCATGGCGGGTA TGGAATAAAAATACGCAACACAGACACACACGCCCTTACACACATACGCA CACAGGCGCTGGGCGGGCGGCAGCCCCACGAGGTGTTCGACATGATAGTC GGGACCAGCACGGGGGGAATCATCGCGGGATTGGCGGGGGTGAAGTGTTT CCCCGTGGCCGAGTGCGAGAAAATGTACGACAACCTCATAAACAAGATCT TCATCAAGCGCCCCGGTGGCGGGATGAAGCTGGCGCTCAAGCAGGCGAGT TCAGGAGTGGAGGGTGGGGGTGAGGTTGAAAACGCACAGACACGCAATAC ATACACATGGTGCCGCAAGCAAAAAGGGCAAAAGCGAGGGAAAGCAGGAG GCGTATACTGTCCTCTCGCCGTCGTCCAAGCCGTCCAGTTGGATATATCT CATTGAGATTGGGGTGGTTTCGAACGATTGTTGCATTTCAGGCGATTTTC TCCAAACGACGGCGTTGTCGGGTACGAATAGTTGCGATGGGGTGGGTGTC GACGATGGACGCAACAATATTGCATGCGTCAATGATACGTAAGTTTATTA CTGAAATAGGTGAGTCTACAACGACGGACGCAACGCAGCAGGCGTTTCAC GACGAGGGTGTTCGTTGTGGAACAAAATGGTCAACCGCAAGTTGCTGACA GTACTGACAATGGGTGGATTGCCAACAACGGGTGCATACTTGCAGGCGTT TTACGACGAGGTTGGGTGGATGAAGATTCTGGACTCTATCCTTGGGGACC AGCTGATGGTCGACTCTGCCCAGGACCCTCTCCGGCCTATGATTGTGTGC CCCAGCACCATCATCAGCTCCAACCCTGCCAAGGTGATGCTGTGGAGGAA CTACAACTATCCCCCGGGCCATCAGAGCAGGTATGCTTTGCGTTTGTTCG CCGTTTTGTCGATGTTGATGTGGGTTTATAGCGTGTTGTGGTTTGCGTGT TTTCTTCAACCCGAACTCTGTTTCCTGTGTTGAGTGGAAAATGTATGATA GCGCAAAAGGAGTGTTTTCTGTTGCTTTGATGGGTAATCCTTGTTCTCTT TTATCCTGCCGTTTGGGAAAAACAGTTCCAGAAATCTTCAAAAGGGCTCG AACTCCTTGCGCGTGATGTATGCACGAAGTGTAATCTTAGCTTTGCGTCA TGTGTGTGTTGTCGGTGTCATATCGGTAACGCGTCTTTGAATCTGTCTTG TCACAGGTACTACGGGAGCTTCAGACACATGGTGCGGGAGGCCATTCGCG CCACCACTGCGGCCCCGACGTTTTTTGCCCCATTGATGATAAATGGGGCT CTCTACTCGGACGGAGCCCTCCTGTGCAACAACCCCTCTGCCGTTGCCTT CCATGAAGCGAAGGTGTGCACGAGTCGTTGTTGTTCTCGTTTGCTGTTGG TGATGATATTGTTGACGTTGTTGATGTTGTTGATGCTGTTCTGTTCTGTT CTGTCGTTTGTGATTGGGTCTAACATTAGCTTACCCCCAAAAGCTAGCCC GCTGGTCACTCCGAGAGTATCAGGTCTGACAGTTGGTATCGCTTTGCTGC TGGAGGCTATTTGACTGACGAAAGGCGTGTTGCGTTCTCTCACCTCGTCG TTTATGGTTCTCATTTTCGCAAGAGGGTTCCAACAAGAAAAACGACTCTA GAATTTCTCAGCGCTTTTTTATTGAGGCTTTGTTTGTCCGTCTGTCGAAG CCCCCCCCCCCCTTTTTATTTCCCGCACGGTCATCTCAACACACCTCTTA ATCCCCCCTCGCTGGTTCAATTTTTATCGTTGCTCTTGCTCGGTCGTTCT AAACATGGACATGCACGAACGCACGCACGCACACGAACGCAGCACCTTTT CCCTGGAGTTCCTGTAGAGATGATAGTCTCCCTCGGCACGGGTTGCTTTT TTGAAGAGAAGAAGGAGTTTCTTGAGCCTGCCGCGCTCGGCTGGGATGGC ATCATCAACCAGGTGCGTTTGCTACAAACGCGGTGTACAGGGAGATCAGG CGCCGAGAAATGATGTCGTAGGAAGTGGGACGTTCTTCTCCGTGTGTGCG TGTTGACTTGAAGCCGTAGTTCTGCATCAAATCCTCGGGCCGTACTGCTG GTTTCTGAAGCCGAGCAAGAACCGAGGCATGTGTGCTACCAACATACACT ATGATAGGATGCCGTCCTTATTTCATCACACAGCGTTACAGGTAGGCCAC TGTTCGTAACTCACCGCTGCAATGAATCGGCGATGAGCTACATAATGTGA TAAGCAGCAGCAACAACAACAACAACAACAACAACACGCGGAGCATGTAG TATACCACAACAACAACAACAACAACAACAGCAGCAACAGCAACAACAAT AGCAACAGCAACAGCAACAGCAACAGCAACAACAACAACAACAACAACAA CAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACA ACCAACACGCGGAGCATGTAGTATACCGTGTAGACAACTAGACAACTGTT ATTCATTCACGAATCCTCAGCTTTGACACGCACCCGATCTAGGCCACCGA AGTTTCTGAACGCTGCTTTTCGCAGTTACATATTTTTTGCTAGTATGGCA CGCTCCCTTTTTCCTATCCCATCATGCGTCCCATGTATTCGGAAAGCACC GAAGAACACCAGCGACCTTGGTGTCCAGCGTGTTGTTATCTTCTTGAGCA ATGGAGCCCTTTTTTTTCGAAAGTGTTTATGTGGTGTGATCTCCTTTGTC TTTACAGCACATGTGCGTTTTGTATTGCAAGGGGGAAATCGGGTTGTGTG CAAGGTGTTCGTAGGTCTGTGTCCAAGGCAACCGTTGTTTGTGGTCGGCC ACAATACTTTTGTTATATGGGTTGTTGCCCGTTGCTTGTTGTCGATGCTG CTGCTGCTGCTTCTGTTGCTGTTGACGTCATTGTTGCTGCTGTGGTTGAT TTCGACAGCGGCAGTGACGTCAAATGTAAACGGTCTTCCGACAACGAGCA AAAAACAACTTATCCGAAAACCGTCCCGTAGCCCCCGCCCTCCCCCCCCA AATTAACCCCGGTATTCTCAATCCCATACCGTATCGTACCGTGCACCAGG TGATTGTGATTGACCCCTGCCCCCCCCCCCCTCCCCCCAATTCAATGTCA ATGTTACTTTAAAACCTCGCCGACCGTGTACTAGGTGATCGCGAGTGCTA CGGAGACGGAGATAACGACGGACATCGTCTCGGACCTCCTTCCGCCTGAG CTGTTCTTTCGTTTCAACCCTCGGATGAAGGACATGCCCATCGATGAGGT CAGGAAGGAGCGCCTCGACTGGCTGAAGACCCTCGCCGACGAGTACTTCG AGGTGTGTGATACGCGTATATATCTCAGATGTGATTTGAATCTTCGGCAT GCCCGACCAAGGAACGCATTTGTCGTACAGTTGTATGTTAGCTGCCGTGG AGAGAGGCGCCGTAGTTTGCTTTGTGTGTGTGTGTGTGTGTGTTTTATCG TTGCGTAAAGTCCATCGCCGAAATCTACGTCGCTGGCTGTCGCAAGGCAG AAGACAAAAATAAATGCCAAGTGGTGATAAAAATCTGGTCACGGGAATGA CAATGGGGGAGCGCAGGGAGTGAGAAGAAGGGAGAAAAGTTCCCTTTACC GCTGTATCACGGGCATCTCATATAAGCTGCAGGATAAACTAACAGGTGTG GCAAACAAGCAAACGAGTTCTCTATTTTGGTGGCGACCACAAAGACGTGG CGCGAACATGATGAGGGGGCAGCTGAAACCCCGCCCGCACTAGCTATGTA GCCGTTCCGGGCCCAGGAAACGGGGCAGCACGATGAAGACGTCACGCCGT CGAGGGTCAAGGGTCTCCCGGCCGGTGGCGTTCCGTCGGCGGGGGGCCAG TGCGTCCACCCTGTCGGACCCGGAACTCAACAACAAGTTCGTTCTGGCAG CCCTGCTGCGCAAGAAGAAGAGCTATAGAGTAGATGCTGTTAACGGTTCC CATAGTGTGAGGGGGTATCGTAGCTCATTTCGCTCTCAAAAAGTGTATGT ATGTAAAAAATGAAAACTGTGACGAGAATGGGTAAGGACACCCGACAGCA CACGTCTAATGAGTGTTTTGCCCCCCCCCCCCTTTCCACGCTCTTGGTGG GTCTCTTTCCTAGAGGTTAAGGATGCCAACCCCCCCACCCCCACCCTCGA CCACCGCCCCCCTCGACACGCGCGTCGGCTCTCAGACACCCGAAAACCAG GCCCGCCTCCAAGAAATGGCGGAAAAGATGCTTTCCGACTCGTATGTCGA AATAGTGTAGGCATGAGCGTACCCGCACATCCTTTTGGGATTGGGCAGCA GAAAGCTAGAGCCAAGCCGATTGCTCAGTGTTGTCATCGTGGGTGGGTG
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig122:77482..94280-

>mRNA_P-littoralis_Contig122.16.3 ID=mRNA_P-littoralis_Contig122.16.3|Name=mRNA_P-littoralis_Contig122.16.3|organism=Pylaiella littoralis U1_48|type=CDS|length=3867bp|location=Sequence derived from alignment at P-littoralis_Contig122:77482..94280- (Pylaiella littoralis U1_48)
ATGCCTGATGGCTCGCTGTGGGAGGGCCTGGGGTCATGGGAGGGACTCGG
AGAAGGACTTTCAGGGGCCTTCCTCTTCGCGCAGCAAGGGTTGGAGGGGC
TGAATATCCTCCCGGGAGGCGCCGATGCCTTCTGGATGAGCTTCGGGCGG
ATGGATGTCCCAGAGCTCCCTGTCCTGTCCGAGATCCGGCTCTTTGGGCT
TTCCTGGCCGCCGCCGCCGTGGCCGTCGCAGACGACTGGATTCTCCACCG
CCGAAAAAGATGGCAAGCTACCGCAACAACGCCAACCCGTGGCACCGCCG
TCGGGAGCGGCGTCGACCACGCCAGCGGCAGGGGGAACGGAGGCGGCGGC
GGGTCGGGGGATGGATAGCGAGGTGGTCACCCGGACGGGGGCGGGGAAGG
AGAGATGGGAACTGCTGTCTGCGTGGCGCCGAAAGCGGCCGGCCGTGACG
GCGGCGGTTGCCGTTGGCGGGGAAGATATTGGCGGCGACTCGGGCACCGA
AGCGGCAGCAGCAACAGCAGCAGCGGGAGCGGTCGAGGGAGGAGGGGCCG
AGGGGACGCGGAGGAAGGTGGGGGGGCTGGCGGCGCTCAGAAATCGGCTT
CCATTGCTTGGTCGAGGCAGAGGAGGGGGCGGCGGTGGCGGGAGGAGGGG
GCGTGGCAGCGGCCGGAGAGGTAGCGGCGGCAGTGCAACGGTGAAGGGCG
ATGTTGGTAGTGGCGGTGGAGGAGGGAGTGCTCCGGGTGAGGGCAGCAGC
CCTCCTGCGGCGCAACCCTCCTCGCCCCCCCCCGGCGGGCGCAGGGGCGG
GGCCGCAGGGGGCAAGGGCAGCAAGAACAACAAAGACAAGAAGGACGACG
ACAACAAGACTGAAGCAAGCAAAATGCTCCCGCTCCCGGCGACTGGCACG
GCAAGGAGCGGCGAAGGGTCTTCCTCGGGGCCGGCAACGGGAAAAGACGT
CCGTCTTTCGAACCAGCGCGGGCTCGCCGATGAGCCGCTGCGCGGCGAGA
CCGGAAGCGGGACCGGAGGGGGTGGCCGGGTGGCCGGGCCAAAACCCAAG
GAGGCAACGGCGGCGGCCGCGGCCGCTGCTGCTGCCGGGAAGAGGAACGG
CCAGACAGCGCTTGGCGGTGGCGGTCCGGAGGTTGCTGTCGGTGGCGCCG
GCGGTGGCCATGGGGATGCTGCTGCCACTGCCGCTGCTGCCGGTGCTCCC
GTTGCTGCTGCGGCTCCGACACATTTCATTCCAAAGTTTGCACCGCCTCC
AAACGCCTGGAAAATCCTGTCGAGCAAACTCCCGACGGAGAAGGAGAAGG
AGAAGGAGAAGGAGTCCTCAAACCGATCCACGAATGGGTCCCCGGATGAT
GTATTTACTTCGGTGGCCAGTGCCGATCGTGCGGCAAGTCGACTCGACGA
GACTAACGACGACGATGATGACGACGACGACGAAATCGACGAGTTCCATG
ATTTTGGCGACGTTCCACTGTCGGTGACCAGGATCCCGACACCGCCGGAT
ATGGAAATAACCATCAATCGGAGTTCGGGAACCCCGGCGAACGCAGAGAC
TCGTTCCGCAGCAGCGGCTGCCGCAAAAGCTGCCGTCGACTCCGACAACG
TCCTAGAAGAGTGGGTTGACGGGGAGCCGGTAGAGGTGCACCATGGGAGG
TACCGGGAACAGCCAAAGCGCCCCGCAGACCTGTCCGGCACTTCCGTGGA
GATGAAGCTGGTCGAAATGGCGTGCCTCTCGGGGCTGTCGTCGTCGGCGG
GCAAGAGCGCCGGCCGCATCATGCACGAGGAGCTAGGATTCGGGCACCTC
TTGCGCGGACTCCGAGAGGACGTCAGGCCGAGCCTTCGTCGGCGCGTCCT
CCAGGCTATCTCCGCCGTGGTCGACAGCGACCCTTCCCTCGCCCCTCACC
TGCTCGGCATCGACCACAACCCTGACGGCGACGTTTCCGCTGCTCGAAGC
AAGACGAAGGAAAAGAAGAGCAGCAGCAGCAGCAGCAGCAGCAGGCTTGC
AGCAGCCGCTGCCGCCGCCGCTTCTTCCATCACGAAAGGCAGGGAGGGCA
GGAACAAGAAGGCCGGCGCCGGCGGCGGGAAGCCCGGCAGCAGGGTGGGG
GTTGGGGCTGTCGCCGCGGTGGTCGTTGGCGAGGACGATCTCCTCGAGTG
CATCACCGCTATCCTCGGCTACCACAGCGTTGCGGGCGTCGGCGGCGGTG
TTGGGGGCGGTGTTGGCGGCGGTGTTGGCGGCGGCGGCGGCGGCGGTGCG
GTAGGAGTGCGGGTCGAAGGAAGCGGCGGTCTTGTCGGGCGTGTCTTTCG
CGCAGTGGCCGAGCTCCTGCCGGTGCCGCGGGTTTGGCCTTTCCTTTCCG
CTGCTGCCGCCGCTGCTGCTGCTCCTGCTGCTGTCACCACCACCGCAGCC
TCCGCTGCTGCAGGGAGCCCCGCTGGTGATGATGACATGGAGAAGGAGAG
AGATGAGGTTGCCAACGAGGGTCGCGACTGGTGGAAGGACGAGGTGGCCA
TTGAGGAGGAAAGGCTCGAGCAACAGGCCGCCGCGGGGGGCACCGCGATC
GGAGACAGGGTGCGGGGGGGGTCCGGCTGGGTCTGGTGGGGCCGCGGCCG
TAGCCGTCGGGCGTCGAGGGAAAGGCTGGTGGAGGAAGCGCTGGAGCTCA
CCTTCCGGCTTATCATGTCGGGGGACGCGGCGTTGGATGCCTTGAAGGTG
GACGAAAACCTGGTAACGGCGCTGAAGAGGGTCGCAGAGGGCGGGGGACA
GCGTTTTCAGTACGATGCCAAGGGCGTTCTTCGGAGAGTGGGCCCTAGGC
TCTCCCACTCCCAACTCCTCGCCAACAAGTGTCTCGCGTCCCTGGGCGCG
CACGAGTGGCGGCCGAAGATGGTCGGCCAAAAGGGGTTGAGGATCCTCTG
CTTCGATGGCGGCGGAACTCGCGGCGTGCTCACGCTTGCCCTCCTCAAGC
ACGTCGAAAAGGCGCTGGGCGGGCGGCAGCCCCACGAGGTGTTCGACATG
ATAGTCGGGACCAGCACGGGGGGAATCATCGCGGGATTGGCGGGGGTGAA
GTGTTTCCCCGTGGCCGAGTGCGAGAAAATGTACGACAACCTCATAAACA
AGATCTTCATCAAGCGCCCCGGTGGCGGGATGAAGCTGGCGCTCAAGCAG
GCGAGTTCAGGAGCGTTTTACGACGAGGTTGGGTGGATGAAGATTCTGGA
CTCTATCCTTGGGGACCAGCTGATGGTCGACTCTGCCCAGGACCCTCTCC
GGCCTATGATTGTGTGCCCCAGCACCATCATCAGCTCCAACCCTGCCAAG
GTGATGCTGTGGAGGAACTACAACTATCCCCCGGGCCATCAGAGCAGGTA
CTACGGGAGCTTCAGACACATGGTGCGGGAGGCCATTCGCGCCACCACTG
CGGCCCCGACGTTTTTTGCCCCATTGATGATAAATGGGGCTCTCTACTCG
GACGGAGCCCTCCTGTGCAACAACCCCTCTGCCGTTGCCTTCCATGAAGC
GAAGCACCTTTTCCCTGGAGTTCCTGTAGAGATGATAGTCTCCCTCGGCA
CGGGTTGCTTTTTTGAAGAGAAGAAGGAGTTTCTTGAGCCTGCCGCGCTC
GGCTGGGATGGCATCATCAACCAGGTGATCGCGAGTGCTACGGAGACGGA
GATAACGACGGACATCGTCTCGGACCTCCTTCCGCCTGAGCTGTTCTTTC
GTTTCAACCCTCGGATGAAGGACATGCCCATCGATGAGGTCAGGAAGGAG
CGCCTCGACTGGCTGAAGACCCTCGCCGACGAGTACTTCGAGACACCCGA
AAACCAGGCCCGCCTCCAAGAAATGGCGGAAAAGATGCTTTCCGACTCGT
ATGTCGAAATAGTGTAG
back to top