mRNA_P-littoralis_Contig122.146.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig122.146.1 vs. uniprot
Match: A0A6H5KLY6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLY6_9PHAE) HSP 1 Score: 103 bits (257), Expect = 7.990e-23 Identity = 40/57 (70.18%), Postives = 49/57 (85.96%), Query Frame = 1
Query: 55 EEYLSKPWKNPEELYWIGKYASDAYKVFIKRTWHDVQPNDHALNWWVEWKRGTQQME 225
+EYLSK W N +ELYW+GKYA+DA+K+FI+R W +VQP+DHALNWWVEW RG QQ E
Sbjct: 317 QEYLSKAWTNVKELYWVGKYAADAHKIFIERKWREVQPDDHALNWWVEWMRGAQQAE 373
BLAST of mRNA_P-littoralis_Contig122.146.1 vs. uniprot
Match: A0A2P6VLS1_9CHLO (Methyl-binding domain 4 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VLS1_9CHLO) HSP 1 Score: 70.1 bits (170), Expect = 6.470e-11 Identity = 36/82 (43.90%), Postives = 47/82 (57.32%), Query Frame = 1
Query: 16 LFCHTVCSIACPQEEYLSKPWKNPEELYWIGKYASDAYKVFIKRTWHDVQPNDHALNWWVEWKRGTQQMEGGV--HPTVEPA 255
LF +I EYL K W++P ELY IGKYA+DAY +F + W +VQP+D L + EW T + G+ H TV PA
Sbjct: 256 LFRKRALAIQQLSHEYLYKVWRDPTELYGIGKYAADAYLMFSRGRWREVQPDDKDLKRYHEWLESTGGLGTGLTRHRTVPPA 337
BLAST of mRNA_P-littoralis_Contig122.146.1 vs. uniprot
Match: A0A1S3HLU9_LINUN (serine/arginine repetitive matrix protein 1 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3HLU9_LINUN) HSP 1 Score: 67.8 bits (164), Expect = 6.190e-10 Identity = 27/49 (55.10%), Postives = 34/49 (69.39%), Query Frame = 1
Query: 55 EEYLSKPWKNPEELYWIGKYASDAYKVFIKRTWHDVQPNDHALNWWVEW 201
EEYLSK WK P ELY IGKY +D+Y++F + W V P DH LN + +W
Sbjct: 722 EEYLSKDWKYPIELYGIGKYGNDSYRIFCVKEWKQVHPEDHKLNAYHKW 770
BLAST of mRNA_P-littoralis_Contig122.146.1 vs. uniprot
Match: T1FWJ7_HELRO (Uncharacterized protein n=1 Tax=Helobdella robusta TaxID=6412 RepID=T1FWJ7_HELRO) HSP 1 Score: 67.0 bits (162), Expect = 6.630e-10 Identity = 25/48 (52.08%), Postives = 33/48 (68.75%), Query Frame = 1
Query: 58 EYLSKPWKNPEELYWIGKYASDAYKVFIKRTWHDVQPNDHALNWWVEW 201
EY +K WK+P ELY +GKY SD+Y +F W V+PNDH LN + +W
Sbjct: 241 EYQTKEWKDPSELYGVGKYGSDSYNIFCVNRWKKVEPNDHKLNKYHDW 288
BLAST of mRNA_P-littoralis_Contig122.146.1 vs. uniprot
Match: A0A2D6E5H8_9BACT (Uncharacterized protein n=1 Tax=bacterium TaxID=1869227 RepID=A0A2D6E5H8_9BACT) HSP 1 Score: 64.3 bits (155), Expect = 7.660e-10 Identity = 29/56 (51.79%), Postives = 34/56 (60.71%), Query Frame = 1
Query: 37 SIACPQEEYLSKPWKN-PEELYWIGKYASDAYKVFIKRTWHDVQPNDHALNWWVEW 201
S+ +YL K WK PE LY IGKYASDAY++F W V P DHALN + W
Sbjct: 80 SLVRMSNDYLVKDWKEYPESLYGIGKYASDAYRIFCTGDWRSVDPKDHALNDYHTW 135
BLAST of mRNA_P-littoralis_Contig122.146.1 vs. uniprot
Match: A0A6P5AYX2_BRABE (methyl-CpG-binding domain protein 4-like isoform X2 n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P5AYX2_BRABE) HSP 1 Score: 67.4 bits (163), Expect = 7.850e-10 Identity = 26/49 (53.06%), Postives = 33/49 (67.35%), Query Frame = 1
Query: 55 EEYLSKPWKNPEELYWIGKYASDAYKVFIKRTWHDVQPNDHALNWWVEW 201
EEYL+K W P+ELY IGKY +D+Y++F W V PNDH LN + W
Sbjct: 507 EEYLTKDWTYPDELYGIGKYGNDSYRIFCVNEWRQVMPNDHKLNDYHNW 555
BLAST of mRNA_P-littoralis_Contig122.146.1 vs. uniprot
Match: UPI0009E65A58 (methyl-CpG-binding domain protein 4-like isoform X2 n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E65A58) HSP 1 Score: 66.2 bits (160), Expect = 1.120e-9 Identity = 25/49 (51.02%), Postives = 35/49 (71.43%), Query Frame = 1
Query: 55 EEYLSKPWKNPEELYWIGKYASDAYKVFIKRTWHDVQPNDHALNWWVEW 201
EE+L+K W P+ELY IGKY D+Y++F W +V PNDH LN++ +W
Sbjct: 230 EEFLTKDWTYPKELYGIGKYGDDSYRIFCLGDWKNVTPNDHKLNFYHKW 278
BLAST of mRNA_P-littoralis_Contig122.146.1 vs. uniprot
Match: UPI0006B09AF5 (methyl-CpG-binding domain protein 4-like n=1 Tax=Limulus polyphemus TaxID=6850 RepID=UPI0006B09AF5) HSP 1 Score: 64.7 bits (156), Expect = 1.190e-9 Identity = 25/49 (51.02%), Postives = 34/49 (69.39%), Query Frame = 1
Query: 55 EEYLSKPWKNPEELYWIGKYASDAYKVFIKRTWHDVQPNDHALNWWVEW 201
+EYL+K W P ELY IGKY +D+Y++F + W V+P DH LN + EW
Sbjct: 128 KEYLTKEWTYPIELYGIGKYGNDSYRIFCVKEWKKVKPTDHMLNKYQEW 176
BLAST of mRNA_P-littoralis_Contig122.146.1 vs. uniprot
Match: A0A2P6U298_CHLSO (Methyl-binding domain 4 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6U298_CHLSO) HSP 1 Score: 67.0 bits (162), Expect = 1.250e-9 Identity = 50/162 (30.86%), Postives = 74/162 (45.68%), Query Frame = 1
Query: 16 LFCHTVCSIACPQEEYLSKPWKNPEELYWIGKYASDAYKVFIKRTWHDVQPNDHALNWWVEWKRGTQQMEGGV--HPTVEPAVGQLQDAGA----------NGLKLAESAVACRNAVNVER*WRSVLLPSWQEGRPGHLTLVL----KRSVVRFGHYRLLST 453
LF +I +YL K W++P ELY IGKYA+DAY +F + W DVQP D L + EW T + G+ H T+ A A A + ++ A + A RN + E ++ P GRPG + ++ K + + +LL T
Sbjct: 558 LFRKRAAAIQQLSHDYLYKQWRDPTELYGIGKYAADAYHMFCRGRWRDVQPEDKDLRKYREWLEQTGGLGTGLTRHRTMPSAAEPAGPANALLSEGYQEPTDSIEAAMTLAAHRNGLQ-EPYFKMRAAP---RGRPGDMAELVQLRRKATAMSADFAKLLGT 715
BLAST of mRNA_P-littoralis_Contig122.146.1 vs. uniprot
Match: A0A7M5XBD2_9CNID (Uncharacterized protein n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5XBD2_9CNID) HSP 1 Score: 66.6 bits (161), Expect = 1.520e-9 Identity = 25/49 (51.02%), Postives = 35/49 (71.43%), Query Frame = 1
Query: 55 EEYLSKPWKNPEELYWIGKYASDAYKVFIKRTWHDVQPNDHALNWWVEW 201
+EYL+K W+ P ELY IGKY +D+Y++F W DV P+DH LN + +W
Sbjct: 658 DEYLNKSWRYPIELYGIGKYGNDSYRIFCLGQWRDVHPDDHKLNLYHDW 706 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig122.146.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig122.146.1 >prot_P-littoralis_Contig122.146.1 ID=prot_P-littoralis_Contig122.146.1|Name=mRNA_P-littoralis_Contig122.146.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=115bp MNDSPLFCHTVCSIACPQEEYLSKPWKNPEELYWIGKYASDAYKVFIKRTback to top mRNA from alignment at P-littoralis_Contig122:440431..440984+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig122.146.1 ID=mRNA_P-littoralis_Contig122.146.1|Name=mRNA_P-littoralis_Contig122.146.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=554bp|location=Sequence derived from alignment at P-littoralis_Contig122:440431..440984+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig122:440431..440984+ >mRNA_P-littoralis_Contig122.146.1 ID=mRNA_P-littoralis_Contig122.146.1|Name=mRNA_P-littoralis_Contig122.146.1|organism=Pylaiella littoralis U1_48|type=CDS|length=345bp|location=Sequence derived from alignment at P-littoralis_Contig122:440431..440984+ (Pylaiella littoralis U1_48)back to top |