mRNA_P-littoralis_Contig122.12.5 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig122.12.5 vs. uniprot
Match: D7FNE7_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNE7_ECTSI) HSP 1 Score: 1036 bits (2678), Expect = 0.000e+0 Identity = 666/796 (83.67%), Postives = 692/796 (86.93%), Query Frame = 3
Query: 282 TRTFMQHDFGLDRRLIKAVAKMGFVYPTLVQNKCIPLALKGKDLLVRARTGSGKTAAFALPLLQKILRRKEAEPGMARGVRAVVLVPTRELCDQARVHLSELMHYCRDEVSLLALVDDNMAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSEDIRAVTKCLPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEGARDGQLSQFYLSLSDKDDKFLVVFAFIKLGLLEGKGLFFVNDTESSYRLKLFLEQFHVRSAVLNAELPLNSRLHILQQEFNRGIFDYLIVTDNSMDVRGVGGVEVP-DGKDSDGESDDN-GVDA-VGSISVSTTVAMDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--EESEFGAARGVDFRGVSFVLNVDFPPTVSSYTHRVGRTARGGASGTALSLVLSKDERQCRTLQRVQSSQPSLAAPSLDGGGGKPR--GGDPSIVAAMGAQSSAEVGGDAAGXXXXXXXXXX--SWAQPAPLAFDIREIERFRYRVEDTLKKVTRVSVREARAAELKAEIINSQQLASYFKENAGDLRVLRHDKSVLHPLRKLEHLKHIPDYLMPRGLQTGEDPTQRQRXXXXXXXXXXXXXXXXXXXXGRRKDNDPLQTFEASELGADGSYGVRGPGGALREGGPAGGEERGEGEEDDKEAARRMNEERKSRVMQTGDFSGESTSGRRRWQQRRGKGKHGGGANKSRAKKTANRFDLPV 2642
T TFMQHDFGLDRRL+KAVAKMGFVYPTLVQNKCIPLAL+GKDLLVRARTGSGKTAAFALPLLQKILRRKEAEPG+ RGVRAVVLVPTRELCDQAR HLSELMHYCRD+VSLLALVDDNMAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSEDIRAVTK LPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEGARDG+LSQFYLSL+DK DKFLVVFAFIKLGLLEGKGLFFVN+TESSYRLKLFLEQFHVRSAVLNAELPLNSRLHILQ EFNRGIFDYLIVTD+SMDV+GVGGV V DG D D SD++ G DA GSI VS +VA++ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX E+SEFGAARGVDFRGVSFVLNVDFPPT SSYTHRVGRTARGGASGTALSLVL+KDE+QCRTLQRVQSSQPSLAAPSLDGG G SIV AMG Q+ V XXXXXXXXXX SWAQPAPLAFDIREIERFRYRVEDTLKKVTRVSVREARAAELKAEI+NSQ+LA YFKENAGDL+VLRHDKSVLHPLRKL+HLKHIPDYLMP GLQTGEDPTQRQR GRRKDNDPLQTFEASELGADGSYG GEE G KEAA+RMNEER+SRVMQTGDFSGESTSGRRRWQQRRGKGKHGGG NK R+KKTANRFD+PV
Sbjct: 44 TLTFMQHDFGLDRRLVKAVAKMGFVYPTLVQNKCIPLALRGKDLLVRARTGSGKTAAFALPLLQKILRRKEAEPGLPRGVRAVVLVPTRELCDQARAHLSELMHYCRDQVSLLALVDDNMAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSEDIRAVTKRLPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEGARDGRLSQFYLSLADKGDKFLVVFAFIKLGLLEGKGLFFVNETESSYRLKLFLEQFHVRSAVLNAELPLNSRLHILQ-EFNRGIFDYLIVTDDSMDVQGVGGVAVEEDGDDGDSVSDESVGGDAPAGSIRVSASVALEGEDAMDQSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGGHRGEDSEFGAARGVDFRGVSFVLNVDFPPTASSYTHRVGRTARGGASGTALSLVLAKDEKQCRTLQRVQSSQPSLAAPSLDGGXXXXXAPGSSGSIVTAMGPQAGGAVXXXXXXXXXXXXXXXXXXSWAQPAPLAFDIREIERFRYRVEDTLKKVTRVSVREARAAELKAEIVNSQKLAGYFKENAGDLKVLRHDKSVLHPLRKLDHLKHIPDYLMPPGLQTGEDPTQRQRKRIKRARGGAKRRQGQGLDQGRRKDNDPLQTFEASELGADGSYG---------------GEEEGR-----KEAAKRMNEERESRVMQTGDFSGESTSGRRRWQQRRGKGKHGGGGNKGRSKKTANRFDMPV 818
BLAST of mRNA_P-littoralis_Contig122.12.5 vs. uniprot
Match: A0A835ZDE1_9STRA (DEAD box helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDE1_9STRA) HSP 1 Score: 655 bits (1689), Expect = 1.760e-219 Identity = 412/659 (62.52%), Postives = 468/659 (71.02%), Query Frame = 3
Query: 285 RTFMQHDFGLDRRLIKAVAKMGFVYPTLVQNKCIPLALKGKDLLVRARTGSGKTAAFALPLLQKILRRKEAEPGMARGVRAVVLVPTRELCDQARVHLSELMHYCRDEVSLLALVDDNMAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSEDIRAVTKCLPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEG-----ARDGQLSQFYLSLSDKDDKFLVVFAFIKLGLLEGKGLFFVNDTESSYRLKLFLEQFHVRSAVLNAELPLNSRLHILQQEFNRGIFDYLIVTDNSMDVRGVGGVEVPDGKDSDGESDDNGVDAVGSISVSTTVAMDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEESEFGAARGVDFRGVSFVLNVDFPPTVSSYTHRVGRTARGGASGTALSLVLSKDERQCRTLQRVQSSQPSLAAPSLDGGGGKPRGGDPSIVAAMGAQSSAEVGGDAAGXXXXXXXXXXSWAQPAPLAFDIREIERFRYRVEDTLKKVTRVSVREARAAELKAEIINSQQLASYFKENAGDLRVLRHDKSVLHPLRKLEHLKHIPDYLMPRGLQTGEDPTQRQ 2246
+TF QHDFGLDRRLIKA AK GF+YPTLVQ+KCIPLALKGKDLLVRARTGSGKTAAF LPLLQK+L R+EAEP +A VRAVVLVPTRELC+Q R L ELM YCRD V LLALVDDNM+AQ+A LRDK D++VATPARLVAHLKAGN+ LKD VETLVVDEADLVLS+GY +DIR VT LPK+CQGFLMSATLS ELE+LKRV+LHSPA+LKLEEG G L QF+L+L + DK LVVFAF+KLGLLEGKGLFFVN T++ YRLKLFLEQFH+RSAVLNAELPL SRLHIL+ EFNRGIFDYLI TD SMDV G GG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ++E+G ARG+DFRGV FV+NVDFPP+ SYTHRVGRTARGGASGTALSL+ + + L VQ+SQP+L D +++ A+G ++A+ G A S AQPAPLAFD+REIE+FRYRV D KKVTRV VREARAAEL+ E+INS L ++FK + DLRVLRHDK+ L+P +L+HLKHIP YLMP GL TGEDPT+RQ
Sbjct: 11 KTFAQHDFGLDRRLIKACAKAGFIYPTLVQSKCIPLALKGKDLLVRARTGSGKTAAFGLPLLQKLLARREAEPDLAAAVRAVVLVPTRELCEQVRGQLWELMAYCRDIVGLLALVDDNMSAQQAQLRDKPDIVVATPARLVAHLKAGNITLKDAVETLVVDEADLVLSYGYRDDIRHVTAHLPKVCQGFLMSATLSEELEELKRVILHSPAILKLEEGDASGGGEGGALLQFFLALREPADKNLVVFAFLKLGLLEGKGLFFVNATDACYRLKLFLEQFHIRSAVLNAELPLASRLHILE-EFNRGIFDYLIATDESMDV-GSGGXXXX-------------------------------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRAGGPKGDAEYGVARGIDFRGVKFVMNVDFPPSARSYTHRVGRTARGGASGTALSLLCERAPAEVAALAEVQASQPALPLTEAD-----------TLLGAIGT-ATADDGVSA----------QLSRAQPAPLAFDLREIEQFRYRVTDVAKKVTRVMVREARAAELRRELINSHALDAHFKSHPDDLRVLRHDKTALNPALRLDHLKHIPSYLMPAGLATGEDPTERQ 578
BLAST of mRNA_P-littoralis_Contig122.12.5 vs. uniprot
Match: A0A6H5KX88_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX88_9PHAE) HSP 1 Score: 648 bits (1671), Expect = 1.230e-217 Identity = 423/567 (74.60%), Postives = 443/567 (78.13%), Query Frame = 3
Query: 288 TFMQHDFGLDRRLIKAVAKMGFVYPTLVQNKCIPLALKGKDLLVRARTGSGKTAAFALPLLQKILRRKEAEPGMARGVRAVVLVPTRELCDQA-----------RVHLSELMHYCRDEVSLLALVDDNMAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSEDIRAVTKCLPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEGARDGQLSQFYLSLSDKDDKFLVVFAFIKLGLLEGKGLFFVNDTESSYRLKLFLEQFHVRSAVLNAELPLNSRLH-------------------------------------------ILQ-----------QEFNRGIFDYLIVTDNSMDVRGVGGV---EVPDGKDSDGESDDNGVDAVGSISVSTTVAMDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEESEFGAARGVDFRGVSFVLNVDFPPTVSSYTHRVGRTARGGASGTALSLVLSKDERQCRTLQRVQSSQ 1784
TFMQHDFGLDRRL+KAVAKMGFVYPTLVQNKCIPLAL+GKDLLVRARTGSGKTAAFALPLLQKILRRKEAEPG+ RGVRAVVLVPTRELC+QA R HLSELMHYCRD+VSLLALVDDNMAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSEDIRAVTK LPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEGARDG+LSQFYLSL+DK DKFLVVFAFIKLGLLEGKGLFFVN+TESSYRLKLFLEQFHVRSAVLNAELPLNSRL IL+ +EFNRGIFDYLIVTD+SMDV+GVGGV E D +DS E G GSI VS +VA+ XXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXX XXXXXXXXXX E+SEFGAARGVDFRGVSFVLNVDFPPT SSYTHRVGRTARGGASGTALSLVL+KDE+QCRTLQRVQ ++
Sbjct: 44 TFMQHDFGLDRRLVKAVAKMGFVYPTLVQNKCIPLALRGKDLLVRARTGSGKTAAFALPLLQKILRRKEAEPGLTRGVRAVVLVPTRELCEQASSSVCGVTHRARAHLSELMHYCRDQVSLLALVDDNMAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSEDIRAVTKRLPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEGARDGRLSQFYLSLADKGDKFLVVFAFIKLGLLEGKGLFFVNETESSYRLKLFLEQFHVRSAVLNAELPLNSRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXILKAIPPFSPTMAIREFNRGIFDYLIVTDDSMDVQGVGGVAVEEADDDEDSVSEESVGGDAPAGSIRVSASVALQEGEDAMDQSSSEEGEXXXXXXXXXXXXXXGKXXXXXXXXXXXXXXXXXXXXXTTGKADNXXXXXXXXXXGHRG-----EDSEFGAARGVDFRGVSFVLNVDFPPTASSYTHRVGRTARGGASGTALSLVLAKDEKQCRTLQRVQDAR 605
BLAST of mRNA_P-littoralis_Contig122.12.5 vs. uniprot
Match: W7TVX7_9STRA (Putative atp-dependent rna helicase ddx56 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TVX7_9STRA) HSP 1 Score: 541 bits (1394), Expect = 1.110e-174 Identity = 357/683 (52.27%), Postives = 440/683 (64.42%), Query Frame = 3
Query: 288 TFMQHDFGLDRRLIKAVAKMGFVYPTLVQNKCIPLALKGKDLLVRARTGSGKTAAFALPLLQKILRRKEAEP--GMAR------------------------GVRAVVLVPTRELCDQARVHLSELMHYCRDEVSLLALVDDN----MAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSEDIRAVTKCLPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEGARDGQLSQFYLSLSDKDDKFLVVFAFIKLGLLEGKGLFFVNDTESSYRLKLFLEQFHVRSAVLNAELPLNSRLHILQQEFNRGIFDYLIVTDNSMDVRGVGGVEVPDGKDSDGESDDNGVDAVGSISVSTTVAMDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEESEFGAARGVDFRGVSFVLNVDFPPTVSSYTHRVGRTARGGASGTALSLVLSKDERQCRTLQRVQSSQPSLAAPSLDGGGGKPRGGDPSIVAAMGAQSSAEVGGDAAGXXXXXXXXXXSWAQPAPLAFDIREIERFRYRVEDTLKKVTRVSVREARAAELKAEIINSQQLASYFKENAGDLRVLRHDKSVLHPLRKLEHLKHIPDYLMPRGLQTGEDPTQRQ 2246
TF DFGLDRRLIKAV++MGF+YPTLVQ+K IPLA++GKDLLVRARTGSGKTAAFALP L KIL +K E GM+ GV A++LVPT+ELCDQ +L +YCRD VS+ AL+ M+AQ+A LRD+ D+LVATP+RLV+HL+AGN+ LK +V+TLV+DEADL+LSFGY ED++ V LP+I QG LMSATLS EL+DLKRVVLHSPAVLKLEEG DG+L QFY+SL + D K L+VF F+KLG+LEGKGLFFVN ++ YRLKLFLEQF +RSAVLNAELPLNSRLH LQ EFNRGIFD+LI TD S+D A G S + XXXXXXXXXXXXXXXXXXXXXXXXXXXXX +E E+G RG+DFR V+FV+NVDFP + +YTHR+GRTARGGA+GTALSL+ D R+ L VQ+SQP+L P GD ++ ++G EVG A QP PLAFD++E+E FRYRVED + VTR++V+EAR AE+K E++NSQ L ++F+EN + ++LRHDK +L R EHLKH+PDYL+P G++ G DP ++
Sbjct: 9 TFSAFDFGLDRRLIKAVSRMGFIYPTLVQSKAIPLAMEGKDLLVRARTGSGKTAAFALPTLHKILLQKAEESTLGMSHSVSTTPATRSSRKKPKAGAQSSPSGVLALILVPTKELCDQTYRTFVDLTYYCRDVVSVQALLGGGDAAAMSAQQALLRDQPDLLVATPSRLVSHLQAGNISLKASVQTLVMDEADLILSFGYEEDVKRVVAALPRIYQGILMSATLSPELDDLKRVVLHSPAVLKLEEGRTDGELLQFYVSLPEAD-KLLLVFVFLKLGVLEGKGLFFVNGLDACYRLKLFLEQFSIRSAVLNAELPLNSRLHTLQ-EFNRGIFDFLIATDESLDT------------------------ACGPESEEXXXXXEEGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAEVSAGRRGRRQSRGGGPAAGKEEGRPGEKEEEE-----------DEKEYGVHRGIDFRAVNFVVNVDFPRSARAYTHRIGRTARGGANGTALSLLNKDDAREQEVLAAVQASQPALP----------PSEGD-TLADSLG--PGGEVGATGA-----------LRTQPTPLAFDLKELEGFRYRVEDVRRAVTRMAVKEARLAEIKQELLNSQALKTHFQENPHEFQILRHDKGILPSHRVQEHLKHVPDYLLPDGMRVGADPATKK 630
BLAST of mRNA_P-littoralis_Contig122.12.5 vs. uniprot
Match: A0A2D4BSN8_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BSN8_PYTIN) HSP 1 Score: 525 bits (1353), Expect = 5.270e-169 Identity = 387/766 (50.52%), Postives = 475/766 (62.01%), Query Frame = 3
Query: 291 FMQHDFGLDRRLIKAVAKMGFVYPTLVQNKCIPLALKGKDLLVRARTGSGKTAAFALPLLQKILRRKEAEPGMARG---VRAVVLVPTRELCDQARVHLSELMHYCRDEVSLLALVDDNMAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSEDIRAVTKCLPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEGARDGQLSQFYLSLSDKDDKFLVVFAFIKLGLLEGKGLFFVNDTESSYRLKLFLEQFHVRSAVLNAELPLNSRLHILQQEFNRGIFDYLIVTDNSMDVRGVGGVEVPDGKDSDGESDDNGVDAVGSISVSTTVAMDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEESEFGAARGVDFRGVSFVLNVDFPPTVSSYTHRVGRTARGGASGTALSLVLSKDERQCRTLQRVQSSQPSLAAPSLDGGGGKPRGGDPSIVAAMGAQSSAEVGGDAAGXXXXXXXXXXSWAQPAPLAFDIREIERFRYRVEDTLKKVTRVSVREARAAELKAEIINSQQLASYFKENAGDLRVLRHDKSVLHPLRKLEHLKHIPDYLMPRGLQTGEDPTQRQRXXXXXXXXXXXXXXXXXXXXGRRKDNDPLQTFEASELGADGSYGVRGPGGALREGGPAGGEERGEGEEDDKEAARRMNEERKSRVMQTGDFSGESTSGRRRWQQRRGKGK 2579
F DFGLD RL KAVAKM FVY TLVQ CIPLA++GKDLLVRARTGSGKTAAFALP+L KIL+ K+ E V+A+VLVPT+EL +Q R H+SELM+YCRD VS+L L +M+AQ+A LRD D++VATP RLVAHL+AGN+ LK++V+T+V+DEADLVLSFGY EDIR++ LPK CQ F MSATLS ELE LKR VLH+ AV+KLEEGA DG+L Q+YLS+ D K L+++A +KLG++ GK LFFVN TE++YRLKLF EQF ++S VLNAELP NSRLHI++ E+NRG+FDYLI TD+S+D R VG V + + XXXXX XXX XXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + +G +RGVDFRGV+FV+NVDFP +V SYTHR+GRTARGGA+GTALSLV D + R LQRVQ SQ + S D AQPA LAFD++EI+ FRYRVED + VTRV+VREAR A++K EI+NS +LAS+F+ N DL +L+HDK++ R HL IPDYL+P LQ T +++ RR DNDPL TF ADG G+ E D A+ E + R+ G+ST+GR++W+QR KG+
Sbjct: 20 FASCDFGLDTRLTKAVAKMQFVYATLVQVHCIPLAMQGKDLLVRARTGSGKTAAFALPMLHKILQHKDDEASRTSARPSVKALVLVPTKELVEQTRKHISELMYYCRDIVSVLGLGGQSMSAQQALLRDVPDIVVATPGRLVAHLEAGNLALKESVQTVVIDEADLVLSFGYGEDIRSIYNHLPKACQTFCMSATLSPELEKLKRSVLHNAAVVKLEEGASDGRLQQYYLSVPGTD-KDLLLYALLKLGVVHGKVLFFVNSTEAAYRLKLFFEQFLIKSVVLNAELPHNSRLHIIE-EYNRGLFDYLIATDDSVD-RDVGEVS---------DDEXXXXXXXXXXXXXXXXXXXXXXXXMXXXIEADTDDEKTAVSXXXXXXXXAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEALAKKPAASARGTKRPRDEGYGVSRGVDFRGVNFVINVDFPRSVRSYTHRIGRTARGGANGTALSLVAQADPKDERALQRVQRSQQPIRTASND-----------------------------------------VLAQPAELAFDLKEIDCFRYRVEDVRRAVTRVAVREARLADVKKEILNSDKLASHFEANPRDLNILQHDKAI-GTARVQPHLATIPDYLVPVTLQAAVPQTNQKKKKHDHKRARTTDGA-------RRTDNDPLHTFTH----ADG----------------------GDAAEGDGAKAKAKPEATEDRISYANFGVGKSTAGRQKWKQRHRKGR 698
BLAST of mRNA_P-littoralis_Contig122.12.5 vs. uniprot
Match: A0A662YEI0_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YEI0_9STRA) HSP 1 Score: 524 bits (1350), Expect = 9.150e-169 Identity = 380/700 (54.29%), Postives = 457/700 (65.29%), Query Frame = 3
Query: 291 FMQHDFGLDRRLIKAVAKMGFVYPTLVQNKCIPLALKGKDLLVRARTGSGKTAAFALPLLQKILRRKEAEPGMARGVRAVVLVPTRELCDQARVHLSELMHYCRDEVSLLALVDDNMAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSEDIRAVTKCLPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEGARDGQLSQFYLSLSDKDDKFLVVFAFIKLGLLEGKGLFFVNDTESSYRLKLFLEQFHVRSAVLNAELPLNSRLHILQQEFNRGIFDYLIVTDNSMDVRGVGGVEVPDGKDSDGESDDNGVDAVGSISVSTTVAMDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEESEFGAARGVDFRGVSFVLNVDFPPTVSSYTHRVGRTARGGASGTALSLVLSKDERQCRTLQRVQSSQPSLAAPSLDGGGGKPRGGDPSIVAAMGAQSSAEVGGDAAGXXXXXXXXXXSWAQPAPLAFDIREIERFRYRVEDTLKKVTRVSVREARAAELKAEIINSQQLASYFKENAGDLRVLRHDKSVLHPLRKLEHLKHIPDYLMPRGLQ------TGEDPTQRQRXXXXXXXXXXXXXXXXXXXXGRRKDNDPLQTFEAS-ELGAD 2369
F ++FGLDRRL KAVAKM FV+ TLVQ CIPLAL+GKDLLVRARTGSGKTAAFALPLL KIL+ K+ VRA+VLVPT+EL +Q R HL ELM+YC D VSLLAL +M+AQ+A LRD DVLVATP RLVAHL+AGN+ LKD+V+T+V+DEADLVLSFGY ED+RA+ LPK CQ F MSATLS ELE LKR VLH+PAV+KLEEGA DG+L QFYL + D DK L+++A ++LG++ GK +FFVN T ++YRLKLF EQF ++SAVLNA+LP NSR HI++ EFNRG+FDYLI TD+S+D R VG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXX ++ +G +RGVDFRGV FV+NVDFP +V +YTHR+GRTARGGASGTALSLV D +Q R L+RVQ+ Q ++ + S D AQPA LAFD++E++ FRYRVED + VTRV+VREA+ A++K E++NS +LA++F+ N DL +L HDK V+ R HL IPDYL+P LQ T + P +RQR RR DNDPL TF AS E AD
Sbjct: 19 FAAYEFGLDRRLTKAVAKMRFVHATLVQVHCIPLALQGKDLLVRARTGSGKTAAFALPLLHKILQLKQDAATSEPAVRALVLVPTKELVEQTRRHLLELMYYCSDVVSLLALGGQSMSAQQALLRDAPDVLVATPGRLVAHLEAGNLTLKDSVQTVVIDEADLVLSFGYGEDVRAIFNALPKACQTFCMSATLSPELEKLKRSVLHNPAVVKLEEGATDGKLQQFYLPV-DAADKDLLLYALLRLGVVHGKVIFFVNTTATAYRLKLFFEQFVIKSAVLNAQLPHNSRQHIIE-EFNRGLFDYLIATDDSVD-RDVGXXXXXXXXX---------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYDGKEDSEGEXXXXXXXXXXXXXXXXEPQEEAKKTAGSKRPRADDEAYGVSRGVDFRGVQFVINVDFPTSVRAYTHRIGRTARGGASGTALSLVAKGDAKQERALKRVQARQQAVRSESND-----------------------------------------VLAQPAELAFDLKEVDCFRYRVEDVRRAVTRVAVREAQLADVKKEMLNSDRLAAHFEANPRDLNMLEHDK-VVGSARVQPHLATIPDYLVPIALQPAAPQRTKKKPNKRQRLASGK----------------RRTDNDPLHTFTASGEAAAD 648
BLAST of mRNA_P-littoralis_Contig122.12.5 vs. uniprot
Match: A0A3M6VU95_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VU95_9STRA) HSP 1 Score: 522 bits (1345), Expect = 3.660e-168 Identity = 359/701 (51.21%), Postives = 442/701 (63.05%), Query Frame = 3
Query: 285 RTFMQHDFGLDRRLIKAVAKMGFVYPTLVQNKCIPLALKGKDLLVRARTGSGKTAAFALPLLQKILRRKEAEPGMARGVRAVVLVPTRELCDQARVHLSELMHYCRDEVSLLALVDDNMAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSEDIRAVTKCLPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEGARDGQLSQFYLSLSDKDDKFLVVFAFIKLGLLEGKGLFFVNDTESSYRLKLFLEQFHVRSAVLNAELPLNSRLHILQQEFNRGIFDYLIVTDNSMDVRGVGGVEVPDGKDSDGESDDNGVDAVGSISVSTTVAMDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEESEFGAARGVDFRGVSFVLNVDFPPTVSSYTHRVGRTARGGASGTALSLVLSKDERQCRTLQRVQSSQPSLAAPSLDGGGGKPRGGDPSIVAAMGAQSSAEVGGDAAGXXXXXXXXXXSWAQPAPLAFDIREIERFRYRVEDTLKKVTRVSVREARAAELKAEIINSQQLASYFKENAGDLRVLRHDKSVLHPLRKLEHLKHIPDYLMPRGLQ------TGEDPTQRQRXXXXXXXXXXXXXXXXXXXXGRRKDNDPLQTFEASELGAD 2369
+ F +FGLDRRL KAVAKM FV+ TLVQ CIPLAL+GKDLLVRARTGSGKTAAFALPLL KIL+ K+ P VRA+VLVPT+EL +Q R H+ ELM+YC+D VSLLAL +M AQ+A LRD DVLVATP RLVAHL+AGN+ LKD+V+T+V+DEADLVLSFGY EDIR + LPK CQ F MSATLS ELE LKR VLH+PAV+KLEEGA DG+L QFYLS+ D K L+++A ++LG++ GK +FFVN T+++YRLKLF EQF ++SAVLNA+LP NSR HI++ EFNRG+FDYLI TD+S+D VG + XXXXXXXX XXXXXXXXXXXXXXXXXXXXX XXXXXX ++ +G +RGVDFRGV FV+NVD P +V +YTHR+GRTARGGASGTALSLV +D ++ R L+RVQ+ Q ++ + + D ++ AQPA LAFD++EI+ FRYRVED + VTRV+VREA+ A++K E++NS++LA+YF+ N DL VL HDK V+ HL IPDYL+P LQ T + +RQR RR DNDPL TF A + D
Sbjct: 15 KPFAACEFGLDRRLSKAVAKMRFVHATLVQVHCIPLALQGKDLLVRARTGSGKTAAFALPLLHKILQHKQDAPASDSAVRALVLVPTKELVEQTRRHMIELMYYCQDTVSLLALGSQSMNAQQALLRDAPDVLVATPGRLVAHLEAGNLTLKDSVQTVVIDEADLVLSFGYGEDIRTIFNALPKACQTFCMSATLSPELEKLKRSVLHNPAVVKLEEGATDGKLQQFYLSVKAVD-KDLLLYALLRLGVVSGKVIFFVNSTDAAYRLKLFFEQFVIKSAVLNAKLPHNSRQHIIE-EFNRGLFDYLIATDDSVDRDEVG----------------DEXXXXXXXXXXXXXXXXXXXXXXXXSDTDSDAVKEDVEEVEXXXXXXXXXXXXXXXXXXXXXESDKGEAVKNDNGADXXXXXXEKTTVSAKRGRADDEGYGVSRGVDFRGVQFVINVDLPKSVRAYTHRIGRTARGGASGTALSLVCKEDPKEERALKRVQAKQQAVRSEAND------------VI-----------------------------AQPAELAFDLKEIDCFRYRVEDVRRAVTRVAVREAQLADIKKEMLNSERLAAYFEANPRDLNVLEHDK-VVGSAPVQPHLATIPDYLVPLELQPPAPARTKKKSNKRQRLADGK----------------RRTDNDPLHTFVAPDASDD 639
BLAST of mRNA_P-littoralis_Contig122.12.5 vs. uniprot
Match: K3WG30_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WG30_GLOUD) HSP 1 Score: 522 bits (1345), Expect = 5.880e-168 Identity = 390/766 (50.91%), Postives = 486/766 (63.45%), Query Frame = 3
Query: 291 FMQHDFGLDRRLIKAVAKMGFVYPTLVQNKCIPLALKGKDLLVRARTGSGKTAAFALPLLQKILRRKEAEPG---MARGVRAVVLVPTRELCDQARVHLSELMHYCRDEVSLLALVDDNMAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSEDIRAVTKCLPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEGARDGQLSQFYLSLSDKDDKFLVVFAFIKLGLLEGKGLFFVNDTESSYRLKLFLEQFHVRSAVLNAELPLNSRLHILQQEFNRGIFDYLIVTDNSMDVRGVGGVEVPDGKDSDGESDDNGVDAVGSISVSTTVAMDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEESEFGAARGVDFRGVSFVLNVDFPPTVSSYTHRVGRTARGGASGTALSLVLSKDERQCRTLQRVQSSQPSLAAPSLDGGGGKPRGGDPSIVAAMGAQSSAEVGGDAAGXXXXXXXXXXSWAQPAPLAFDIREIERFRYRVEDTLKKVTRVSVREARAAELKAEIINSQQLASYFKENAGDLRVLRHDKSVLHPLRKLEHLKHIPDYLMPRGLQTGEDPTQRQRXXXXXXXXXXXXXXXXXXXXGRRKDNDPLQTFEASELGADGSYGVRGPGGALREGGPAGGEERGEGEEDDKEAARRMNEERKSRVMQTGDFSGESTSGRRRWQQRRGKGK 2579
F DFGLDRRL KAVAKM FVY TLVQ CIPLA++GKDLLVRARTGSGKTAAF LPLL KIL++K+ + + V+A+VLVPT+EL +Q + H+SELM+YC D VSLLAL +M AQ+A LRD D+++ATP RLVAHL+AGN++LKD+V+TLV+DEADLVLSFGY EDIR + LPK CQ F MSATLS ELE LK+ VLH+PAV+KLEEG DG+L Q+YL +S D K L+++A IKLG++ GK +FFVN TE++YRLKLF EQF ++SAVLNAELP NSR HI++ E+NRG+FDYLI TD+S+D +V +G D XXXXXXXXXXXXXXXXX XXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + +G +RGVDFRGV+FV+NVDFP +V +YTHR+GRTARGGA+GTALSLV D +Q R L RVQ+SQ + PS D QPA L+FD++EI+ FRYRVED + VT V+VREA+ A++K EI+NS++L S+F+ N DL +L HDK++ R HL IPDYL+P LQ + + RR DNDPL TF + G R GE+ DK++A ++ E+R + G+ST+GR++W+Q KG+
Sbjct: 23 FASCDFGLDRRLTKAVAKMQFVYATLVQVHCIPLAMQGKDLLVRARTGSGKTAAFGLPLLHKILQQKQDQSSAGALQPSVKALVLVPTKELVEQTKRHMSELMYYCNDVVSLLALGGQSMNAQQALLRDVPDIIIATPGRLVAHLEAGNLKLKDSVQTLVIDEADLVLSFGYGEDIRTIFNHLPKACQNFCMSATLSPELEKLKKSVLHNPAVVKLEEGETDGKLQQYYLPVSQAD-KELLLYALIKLGVIHGKVIFFVNTTEAAYRLKLFFEQFIIKSAVLNAELPHNSRQHIIE-EYNRGLFDYLIATDDSVDR------DVGEGSD--------------------XXXXXXXXXXXXXXXXXXXXXXPXXXXXAEVEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPAAKKAANGSNKRKRDESYGVSRGVDFRGVNFVINVDFPKSVRAYTHRIGRTARGGANGTALSLVALADAKQKRYLDRVQASQKPVLTPSKD-----------------------------------------LLKQPAELSFDLKEIDCFRYRVEDVRRAVTSVAVREAQLADVKKEILNSEKLVSHFEANPRDLNILEHDKAI-GTARVQPHLATIPDYLVPIALQAAAPQKKHAKKNKRMRMNKDGK---------RRTDNDPLHTFTHGDEGEHDEV------------------VRNAGEDGDKKSAPKVEEDR---ITFGNSGVGKSTAGRQKWKQNHRKGR 688
BLAST of mRNA_P-littoralis_Contig122.12.5 vs. uniprot
Match: A0A5D6XSV1_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XSV1_9STRA) HSP 1 Score: 520 bits (1339), Expect = 1.050e-167 Identity = 367/703 (52.20%), Postives = 457/703 (65.01%), Query Frame = 3
Query: 285 RTFMQHDFGLDRRLIKAVAKMGFVYPTLVQNKCIPLALKGKDLLVRARTGSGKTAAFALPLLQKILRRKEAEPG---MARGVRAVVLVPTRELCDQARVHLSELMHYCRDEVSLLALVDDNMAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSEDIRAVTKCLPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEGARDGQLSQFYLSL--SDKDDKFLVVFAFIKLGLLEGKGLFFVNDTESSYRLKLFLEQFHVRSAVLNAELPLNSRLHILQQEFNRGIFDYLIVTDNSMDVRGVGGVEVPDGKDSDGESDDNGVDAVGSISVSTTVAMDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEESEFGAARGVDFRGVSFVLNVDFPPTVSSYTHRVGRTARGGASGTALSLVLSKDERQCRTLQRVQSSQPSLAAPSLDGGGGKPRGGDPSIVAAMGAQSSAEVGGDAAGXXXXXXXXXXSWAQPAPLAFDIREIERFRYRVEDTLKKVTRVSVREARAAELKAEIINSQQLASYFKENAGDLRVLRHDKSVLHPLRKLEHLKHIPDYLMPRGLQTGEDPTQRQRXXXXXXXXXXXXXXXXXXXXGRRKDNDPLQTFEASELGADGSY 2378
++F DFGLDRRL KAVAK+ FV+ TLVQ CIPLA++GKDLLVRARTGSGKTAAFALPLL KIL++K+ + M V+A+VLVPT+EL +Q R H++ELM+YC D VSLLAL +M AQ+A LRD DV+VATP RLVAHL+AGN++LKD+V+TLV+DEADLVLSFGY EDIR + LPK CQ F MSATLS ELE LK+ VLH+PAV+KLEEGA DG+L Q++L++ +DKD L+++A IKLG+++GK +FFVN TE++YRLKLF EQF ++SAVLNAELP NSR HI++ EFNRG+FDYLI TD+S+D R VG E+ D XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + +G +RGVDFRGV+FV+NVDFP +V +YTHR+GRTARGGA+GTALSLV D +Q R L RVQ+SQ + + D AQPA LAFD+ E++ FRYRVED + VT V+VREA+ A++K E++NS +L ++F N DL +L HDK++ R HL +PDYL+P LQ P ++ R RR DNDPL TF ++ DG++
Sbjct: 15 QSFAASDFGLDRRLTKAVAKLQFVHATLVQTHCIPLAMQGKDLLVRARTGSGKTAAFALPLLHKILQQKQDQSSAGAMLPSVKALVLVPTKELVEQIRKHMAELMYYCSDVVSLLALGGQSMNAQQALLRDVPDVVVATPGRLVAHLEAGNIKLKDSVQTLVIDEADLVLSFGYGEDIRTIFNHLPKACQSFCMSATLSPELEKLKKSVLHNPAVVKLEEGATDGKLQQYFLAVPAADKD---LLLYALIKLGVVQGKVIFFVNSTEAAYRLKLFFEQFIIKSAVLNAELPHNSRQHIIE-EFNRGLFDYLIATDDSVD-RDVG------------EASDX-------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSKRPRDEAYGVSRGVDFRGVNFVINVDFPKSVRAYTHRIGRTARGGANGTALSLVGRGDSKQARALARVQASQKPVLTATKD-----------------------------------------VLAQPAELAFDLAEVDCFRYRVEDVRRAVTGVAVREAQLADVKKEMLNSDKLVAHFAANPRDLNILEHDKAI-GTARVQMHLATVPDYLVPLALQAAPPPKKKGRVTKRVRGGGGADGK-------RRTDNDPLHTFTHADADGDGAH 608
BLAST of mRNA_P-littoralis_Contig122.12.5 vs. uniprot
Match: H3GBC9_PHYRM (Uncharacterized protein n=16 Tax=Phytophthora TaxID=4783 RepID=H3GBC9_PHYRM) HSP 1 Score: 520 bits (1339), Expect = 2.340e-167 Identity = 377/701 (53.78%), Postives = 461/701 (65.76%), Query Frame = 3
Query: 285 RTFMQHDFGLDRRLIKAVAKMGFVYPTLVQNKCIPLALKGKDLLVRARTGSGKTAAFALPLLQKILRRKEAEPGMARGVRAVVLVPTRELCDQARVHLSELMHYCRDEVSLLALVDDNMAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSEDIRAVTKCLPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEGARDGQLSQFYLSLSDKDDKFLVVFAFIKLGLLEGKGLFFVNDTESSYRLKLFLEQFHVRSAVLNAELPLNSRLHILQQEFNRGIFDYLIVTDNSMDVRGVGGVEVPDGKDSDGESDDNGVDAVGSISVSTTVAMDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEESEFGAARGVDFRGVSFVLNVDFPPTVSSYTHRVGRTARGGASGTALSLVLSKDERQCRTLQRVQSSQPSLAAPSLDGGGGKPRGGDPSIVAAMGAQSSAEVGGDAAGXXXXXXXXXXSWAQPAPLAFDIREIERFRYRVEDTLKKVTRVSVREARAAELKAEIINSQQLASYFKENAGDLRVLRHDKSVLHPLRKLEHLKHIPDYLMPRGLQ------TGEDPTQRQRXXXXXXXXXXXXXXXXXXXXGRRKDNDPLQTFEASELGAD 2369
+ F + +FGLDRRL KAVAKM FV+ TLVQ CIPLAL+GKDLLVRARTGSGKTAAFALPLL KIL+ K+ P VRA+VLVPT+EL +Q R H++ELM+YC+D VSLLAL +M+AQ+A LRD DVLVATP RLVAHL+AGN+ LK++V+T+V+DEADLVLSFGY EDIR + LPK CQ F MSATLS ELE LKR VLH+PAV+KLEEGA DG+L QFYL + D K L+++A ++LG++ GK +FFVN TE++YRLKLF EQF ++SAVLNA+LP NSR HI++ EFNRG+FDYLI TD+S+D R VG E D XXX XXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXX ++ +G +RGVDFRGV FV+NVDFP +V +YTHR+GRTARGGASGTALSLV ++ R L+RVQ+ Q ++ + + D AQPA LAFD++EI+ FRYRVED + VTRV+VREA+ A++K E++NS++LA++F+ N DL +L HDK V +L HL IPDYL+P LQ T + +RQR RR DNDPL TF A + D
Sbjct: 15 KAFAECEFGLDRRLTKAVAKMRFVHATLVQVHCIPLALQGKDLLVRARTGSGKTAAFALPLLHKILQHKQDAPASDPAVRALVLVPTKELVEQTRRHMTELMYYCQDTVSLLALGGQSMSAQQALLRDAPDVLVATPGRLVAHLEAGNLTLKESVQTVVIDEADLVLSFGYGEDIRTIFNALPKACQTFCMSATLSPELEKLKRSVLHNPAVVKLEEGATDGKLQQFYLPVKPAD-KDLLLYALLRLGVVSGKVIFFVNSTEAAYRLKLFFEQFVIKSAVLNAKLPHNSRQHIIE-EFNRGLFDYLIATDDSVD-RDVG------------EED---------XXXXXXXXXXXXXEDADXXXXXXXXXXXXXXXXXXXXXXGDDSDSDXXXXXXXXXXXXXXXXXXXXXXXXXXXQKQEKKSVGSKRGRADDESYGVSRGVDFRGVQFVINVDFPKSVRAYTHRIGRTARGGASGTALSLVSKDSPKEERALKRVQAKQQAVRSEAND-----------------------------------------VLAQPAELAFDLKEIDCFRYRVEDVRRAVTRVAVREAQLADVKKEMLNSERLAAHFEANPRDLNMLEHDKVVGSAPVQL-HLATIPDYLVPIELQPPAPARTKKKHNKRQRIADGK----------------RRTDNDPLHTFVAPDADND 633 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig122.12.5 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig122.12.5 >prot_P-littoralis_Contig122.12.5 ID=prot_P-littoralis_Contig122.12.5|Name=mRNA_P-littoralis_Contig122.12.5|organism=Pylaiella littoralis U1_48|type=polypeptide|length=838bp MGKSKAPGKEGTRKRKELERQEAQEQLAAAAAAHPHSDEQQQPQEQQEQQback to top mRNA from alignment at P-littoralis_Contig122:57762..71330- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig122.12.5 ID=mRNA_P-littoralis_Contig122.12.5|Name=mRNA_P-littoralis_Contig122.12.5|organism=Pylaiella littoralis U1_48|type=mRNA|length=13569bp|location=Sequence derived from alignment at P-littoralis_Contig122:57762..71330- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig122:57762..71330- >mRNA_P-littoralis_Contig122.12.5 ID=mRNA_P-littoralis_Contig122.12.5|Name=mRNA_P-littoralis_Contig122.12.5|organism=Pylaiella littoralis U1_48|type=CDS|length=2514bp|location=Sequence derived from alignment at P-littoralis_Contig122:57762..71330- (Pylaiella littoralis U1_48)back to top |