mRNA_P-littoralis_Contig122.105.9 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig122.105.9
Unique NamemRNA_P-littoralis_Contig122.105.9
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig122.105.9 vs. uniprot
Match: D8LLJ0_ECTSI (START domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLJ0_ECTSI)

HSP 1 Score: 440 bits (1132), Expect = 2.540e-143
Identity = 324/632 (51.27%), Postives = 361/632 (57.12%), Query Frame = 3
Query:   24 MLRQLVAILAATLLSLKSHTTTTACTMALPSGQSLFAAXXXXXXXXXXXXXXXXXXXXXXXXXXHDNHFYLASDTPHIRRNYSAVEDVLGHYPQTGRFGAKHKSGVLLTSARDPGAGNDKEWEKVE-ESWTTTLAALAASGTALALRPRPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQLHTELSSNLQALSSWSRRIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRQLWRLRAQLSGLTAGACCRVESLLFSAQ-SGEVRLRAMRCGDLLRRHGRGLLLRSVEMVRRGARAGGKGQEXXXXXXGEWEGSR---LALLTDLTVQNVVDVVARDGWEHVATTKGVVVHRQYIALGPDGTPRTTEEPAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXPEGXXXXXXEGAR-SGSNSCS------SGTDKAPQFACVKATAIISVPPEVVYLLFADNSRVGEYNEHCREVKDLQVLSEDSKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSRPVEHPAAPRSSRYVRSEILLAGNFMRPVPGDPSRTEFLMVTHVNPGGAAETRAGAMLVNSLCASSPVTFIRRLEVAAQKLMLEL 1883
            MLR+ VAILAATLL LK H+ +   T ALP  Q                               H  H       PH        +D    YPQTGRF A HK G++L    D  AG  +EWE  + E W  T+AA+ ASG+ LAL+                            XXXXXXXXXXXXXXXX     +++  ELS+NL A     RR R                                         R+ L +L AQLS LT     R E LL +A+ SG V +R   C +LLRR GR L L  +   +     GG+G+       GE E  +   L LLTD  VQNVVDVVARDGWE V   +GVVVHRQY+ALGPDGTP                          XXXXX     P+        G R  GS   S      SG  K PQFACVKA+AI+SVPPEVVYLLFADNSRVGEYNEHCREVKDL+VLS+DSKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVS+PVEHPAAPR+SRYVRSEILLAGNFMRPVPGDPSRTEFLMVTHVNPGGAAETRAGAMLVNSLC SSPVTFIRRLEVAA+KLMLEL
Sbjct:   34 MLRERVAILAATLLLLKCHSMSGGATGALPDQQQ------------------------------HRRH------VPHYGCTPPRAQDFGSRYPQTGRFEAWHKRGLVLD---DEPAG--EEWEGADRECWGATIAAIVASGSTLALQRT---LKPDEQQSASAEGYGRQPRHYRRXXXXXXXXXXXXXXXXSAPRFRRMRAELSANLDAWRMRRRRARETTPAAAIVI-------------------------------RQHLTQLTAQLSELTGEGFRRAERLLSAAKASGNVGIRIAGCAELLRRRGRELFLLGLRKKQNPDGLGGEGK-LGKGKEGEAERRKMRELQLLTDKIVQNVVDVVARDGWEVVVEREGVVVHRQYLALGPDGTPEAXXX---------------------XXXXXQAAGVPKAEASSAFVGGRVEGSADDSVPVGDDSGKSKPPQFACVKASAILSVPPEVVYLLFADNSRVGEYNEHCREVKDLEVLSQDSKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSKPVEHPAAPRTSRYVRSEILLAGNFMRPVPGDPSRTEFLMVTHVNPGGAAETRAGAMLVNSLCTSSPVTFIRRLEVAAKKLMLEL 568          
BLAST of mRNA_P-littoralis_Contig122.105.9 vs. uniprot
Match: A0A6H5J623_9PHAE (START domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J623_9PHAE)

HSP 1 Score: 441 bits (1135), Expect = 3.900e-143
Identity = 313/626 (50.00%), Postives = 354/626 (56.55%), Query Frame = 3
Query:   24 MLRQLVAILAATLLSLKSHTTTTACTMALPSGQSLFAAXXXXXXXXXXXXXXXXXXXXXXXXXXHDNHFYLASDTPHIRRNYSAVEDVLGHYPQTGRFGAKHKSGVLLTSARDPGAGNDKEWEKVE-ESWTTTLAALAASGTALALRPRPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQLHTELSSNLQALSSWSRRIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRQLWRLRAQLSGLTAGACCRVESLLFSAQ-SGEVRLRAMRCGDLLRRHGRGLLLRSVEMVRRGARAGGKGQEXXXXXXGEWEGSR---LALLTDLTVQNVVDVVARDGWEHVATTKGVVVHRQYIALGPDGTPRTTEEPAP-AXXXXXXXXXXXXXXXXXXXXXXXXXXXPEGXXXXXXEGARSGSNSCSSGTDKAPQFACVKATAIISVPPEVVYLLFADNSRVGEYNEHCREVKDLQVLSEDSKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSRPVEHPAAPRSSRYVRSEILLAGNFMRPVPGDPSRTEFLMVTHVNPGGAAETRAGAMLVNSLCASSPVTFIRRLEVAAQKLMLEL 1883
            MLR+ VAILAATLL L+ H+ +   T A+P  Q                               H  H       PH        +D    YPQTGRF A+HK G+++    D  AG  +EWE+ + E W+ T+AA+ ASG+ LAL+                           XXXXXXXXXXXXXXX       +++  ELS+NL A     RR R                                         R+ L  L AQLS LT     R E LL +A  SG V +R   C +LLRR GR L L  + + +R    G  G +      GE E  +   L LLTD  VQNVVDVVARDGWE V   +GVVVHRQY+ALGPDGTP     PA  A                           P G                 SG  + PQFACVKA+AI+SVPPEVVYLLFADNSRVGEYNEHCREVKDL+VLS+DSKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVS+PVEHPAAPR+SRYVRSEILLAGNFMRPVPGDPSRTEFLMVTHVNPGGAAETRAGAMLVNSLC SSPVTFIRRLEVAA+KLMLEL
Sbjct:    1 MLRERVAILAATLLLLECHSMSGGATGAIPDQQQ------------------------------HRRH------VPHYGCTPQRAQDFGSRYPQTGRFEAQHKRGLVVD---DQPAG--EEWEEADLECWSATMAAIVASGSTLALQRT---LKPDEQQSASAEGYGRQQRHIRXXXXXXXXXXXXXXXNSSAPRFRRIRAELSANLDAWRMRRRRARETIPAAAIVI-------------------------------RQHLTHLTAQLSELTGEGFRRAERLLSAANASGNVGIRIAGCAELLRRRGRELFL--LGLRKRQNPDGSGGDKLGMGKEGEAERRKMRELQLLTDKIVQNVVDVVARDGWEVVVEREGVVVHRQYLALGPDGTPEAPAAPAAHAQAAGVPKAEAYSASVGGRVEGSADDPAPVGED---------------SGKFRPPQFACVKASAILSVPPEVVYLLFADNSRVGEYNEHCREVKDLEVLSQDSKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSKPVEHPAAPRTSRYVRSEILLAGNFMRPVPGDPSRTEFLMVTHVNPGGAAETRAGAMLVNSLCTSSPVTFIRRLEVAAKKLMLEL 534          
BLAST of mRNA_P-littoralis_Contig122.105.9 vs. uniprot
Match: A0A7S2V5A8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5A8_9STRA)

HSP 1 Score: 205 bits (522), Expect = 8.030e-56
Identity = 95/166 (57.23%), Postives = 124/166 (74.70%), Query Frame = 3
Query: 1377 QFACVKATAIISVPPEVVYLLFADNSRVGEYNEHCREVKDLQVLSEDSKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSRPVEHPAAPRSSRYVRSEILLAGNFMRPVPGDPSRTEFLMVTHVNPGGAAETRAGAMLVNSLCASSPVTFIRRLEVAAQKLM 1874
            +FA +KA   I  P E V+ LF DNSRVGEYN+HC E+KDL+ +   +K+TW+ASG+ GPFKARDFCTLVHF TL+DGT A VS P  HP AP +SRYVRSE+++AG+FMR  P DP++T F  +T VNPGG A +   A +VNSL    P+TF++++E+AAQ+ M
Sbjct:  219 KFAVIKAVGTIDAPIEEVHKLFVDNSRVGEYNDHCHEIKDLEWVGPRTKVTWSASGKYGPFKARDFCTLVHFATLADGTQAIVSVPFNHPQAPATSRYVRSEVIMAGHFMRRDPKDPNKTAFTTITQVNPGGIAGSAGAAKIVNSLSTQGPITFVKKVELAAQQTM 384          
BLAST of mRNA_P-littoralis_Contig122.105.9 vs. uniprot
Match: I2CRQ3_NANGC (Lipid transfer protein 5-like protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CRQ3_NANGC)

HSP 1 Score: 196 bits (498), Expect = 1.750e-55
Identity = 86/144 (59.72%), Postives = 115/144 (79.86%), Query Frame = 3
Query: 1377 QFACVKATAIISVPPEVVYLLFADNSRVGEYNEHCREVKDLQVLSEDSKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSRPVEHPAAPRSSRYVRSEILLAGNFMRPVPGDPSRTEFLMVTHVNPGGAAETRAGAMLVN 1808
            +FACVKA  ++  P + V+ LF D++RVGEYNEHCRE++D+  LS ++K+TW+ASGR GPFKARDFCT+VH+R L DG L  V+R  EH  APRS +YVRSEILLAGN MRP P DP++T  + +TH+NPGG+ +++AGA++VN
Sbjct:   16 RFACVKAVGVVDAPVDRVFDLFLDSARVGEYNEHCREIQDIDTLSANTKVTWSASGRYGPFKARDFCTVVHYRRLEDGRLVVVNRAAEHVRAPRSDKYVRSEILLAGNIMRPHPSDPNKTLLVTLTHINPGGSIDSKAGALMVN 159          
BLAST of mRNA_P-littoralis_Contig122.105.9 vs. uniprot
Match: A0A6U4ZLH7_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U4ZLH7_HEMAN)

HSP 1 Score: 195 bits (496), Expect = 5.670e-54
Identity = 88/167 (52.69%), Postives = 122/167 (73.05%), Query Frame = 3
Query: 1368 KAPQFACVKATAIISVPPEVVYLLFADNSRVGEYNEHCREVKDLQVLSEDSKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSRPVEHPAAPRSSRYVRSEILLAGNFMRPVPGDPSRTEFLMVTHVNPGGAAETRAGAMLVNSLCASSPVTFIRRLEVAAQK 1868
            +A +F CVKA A++   P  VY LF DN+RV EYNE C++++DL+  +  +K+TW+AS R+GPFK RDF T VH+RTL D TL  V+R  +HPAAP++ RY+R EI+L GN M+PVP DP +T F M+THVNPGG A TR G M++NS  A+ P++F++ L  A ++
Sbjct:   34 EASKFLCVKAEAVLDASPAQVYTLFVDNTRVREYNEFCKQIRDLEYKNSTTKVTWSASARIGPFKERDFVTRVHYRTLPDQTLLVVNRAEDHPAAPQTDRYLRMEIVLGGNVMKPVPSDPEKTMFTMLTHVNPGGVAGTRMGTMIMNSAAANGPISFVQGLRDALKR 200          
BLAST of mRNA_P-littoralis_Contig122.105.9 vs. uniprot
Match: A0A7S2RES9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RES9_9STRA)

HSP 1 Score: 195 bits (496), Expect = 5.820e-53
Identity = 90/165 (54.55%), Postives = 120/165 (72.73%), Query Frame = 3
Query: 1371 APQFACVKATAIISVPPEVVYLLFADNSRVGEYNEHCREVKDLQVLSEDSKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSRPVEHPAAPRSSRYVRSEILLAGNFMRPVPGDPSRTEFLMVTHVNPGGAAETRAGAMLVNSLCASSPVTFIRRLEVAAQ 1865
            A +F+CVKATAI++  P  VY LF DNS+V EYNEHC++++D++ +S+D+K+ W+ +   GPFK RDF T+VH+R   DGTL  ++RP  HP  P   ++ R+E+LLAGN MRPV GD S+TEF M+THVNPGG      GA +VN +C+  PV FIRRLE AAQ
Sbjct:  133 AAKFSCVKATAILNASPHDVYKLFLDNSQVHEYNEHCQKLEDVERVSKDTKVAWSVTAPFGPFKPRDFVTMVHYRREPDGTLMVLNRPCNHPDRPPVPQFQRAELLLAGNVMRPVQGDKSKTEFTMITHVNPGGVVNNALGAAIVNRICSQGPVDFIRRLERAAQ 297          
BLAST of mRNA_P-littoralis_Contig122.105.9 vs. uniprot
Match: A0A6H5JSI0_9PHAE (START domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSI0_9PHAE)

HSP 1 Score: 196 bits (497), Expect = 5.010e-52
Identity = 92/166 (55.42%), Postives = 122/166 (73.49%), Query Frame = 3
Query: 1365 DKAPQFACVKATAIISVPPEVVYLLFADNSRVGEYNEHCREVKDLQVLSEDSKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSRPVEHPAAPRSSRYVRSEILLAGNFMRPVPGDPSRTEFLMVTHVNPGGAAETRAGAMLVNSLCASSPVTFIRRLEVAA 1862
            + A +FACVKA   +      +Y LF DN RV EYN++C+EV+DL+ LS+D+K++WA + R  PFKARDF T VH+RTL DGT+  V+RPVEHPAA R  +YVR+EIL+A N MRP   DPS+T+F+ VTH+NPGG A++R GA +VN LCA +PV  +  LE +A
Sbjct:  239 EAAAKFACVKAMGTLDARASDLYKLFLDNERVHEYNDNCKEVRDLERLSDDTKVSWACTPRYRPFKARDFVTAVHYRTLEDGTMMVVNRPVEHPAARRGKKYVRAEILIATNIMRPNREDPSKTDFISVTHINPGGIADSRIGAKIVNKLCAKAPVNLLVALERSA 404          
BLAST of mRNA_P-littoralis_Contig122.105.9 vs. uniprot
Match: D8LAW9_ECTSI (START domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAW9_ECTSI)

HSP 1 Score: 195 bits (496), Expect = 3.010e-51
Identity = 116/265 (43.77%), Postives = 153/265 (57.74%), Query Frame = 3
Query: 1068 DLTVQNVVDVVARDGWEHVATTKGVVVHRQYIALGPDGTPRTTEEPAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXPEGXXXXXXEGARSGSNSCSSGTDKAPQFACVKATAIISVPPEVVYLLFADNSRVGEYNEHCREVKDLQVLSEDSKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSRPVEHPAAPRSSRYVRSEILLAGNFMRPVPGDPSRTEFLMVTHVNPGGAAETRAGAMLVNSLCASSPVTFIRRLEVAA 1862
            D +V+ V+ V+  DGWE V    GVVV R+++                                     XXXXXXX   X     EGA             A +FACVKA   +      +Y LF DN RV EYN++C+EV+DL+ LS+D+K++WA + R  PFKARDF T VH+RTL DGT+  ++RPVEHPAA R  +YVR+EIL+A N MRP   DPS+T+F+ VTH+NPGG A++R GA +VN LCA +PV  +  LE +A
Sbjct:  252 DASVEAVLAVIESDGWERVTEKSGVVVVRKFVXXX----------------------------------XXXXXXXXXXXRGIVDEGA-------------AAKFACVKAMGTLDARASDLYKLFLDNERVHEYNDNCKEVRDLERLSDDTKVSWACTPRYRPFKARDFVTAVHYRTLEDGTMMVLNRPVEHPAARRGKKYVRAEILIATNIMRPNREDPSKTDFISVTHINPGGIADSRIGAKIVNKLCAKAPVNLLVALERSA 469          
BLAST of mRNA_P-littoralis_Contig122.105.9 vs. uniprot
Match: A0A7S0QTI7_9CRYP (Hypothetical protein (Fragment) n=2 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QTI7_9CRYP)

HSP 1 Score: 182 bits (462), Expect = 5.070e-49
Identity = 84/161 (52.17%), Postives = 116/161 (72.05%), Query Frame = 3
Query: 1371 APQFACVKATAIISVPPEVVYLLFADNSRVGEYNEHCREVKDLQVLSEDSKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSRPVEHP-AAPRSSRYVRSEILLAGNFMRPVPGDPSRTEFLMVTHVNPGGAAETRAGAMLVNSLCASSPVTFIRRL 1850
            A +F C+KA  ++  PP  V+ LF DN+R GEYNE CRE++D++ +   +K+TW+ASGR+GPFK RDF T VH+R+L DGTL  V+R  + P  A  S RY+R E+ L G+ +RP+PG+P+RT +  + HVNPGG AETR GAML+N+  AS PV  ++RL
Sbjct:   38 AAKFDCIKAAGVLDAPPAEVFELFIDNARAGEYNEFCRELRDVEFIDNATKVTWSASGRVGPFKERDFVTRVHYRSLPDGTLLVVNRAEDAPLTAASSDRYLRMEMYLGGSVLRPLPGNPNRTIYTTLAHVNPGGVAETRIGAMLMNAAAASGPVKLVQRL 198          
BLAST of mRNA_P-littoralis_Contig122.105.9 vs. uniprot
Match: A0A7S4NFJ2_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4NFJ2_GUITH)

HSP 1 Score: 182 bits (461), Expect = 1.190e-48
Identity = 87/163 (53.37%), Postives = 114/163 (69.94%), Query Frame = 3
Query: 1377 QFACVKATAIISVPPEVVYLLFADNSRVGEYNEHCREVKDLQVLSEDSKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSRPVEHPAAPRSSRYVRSEILLAGNFMRPVPG-----DPSRTEFLMVTHVNPGGAAETRAGAMLVNSLCASSPVTFIRRL 1850
            +F CV ++ I+  PPE VY  F DNSRV EYNE C++VKDL+ L  ++KITW+ASGR+GPFK RDF T VH+RT SDG+L   +R  +HP AP + R++R EI++ GN +RP        D SRT   ++THVNPGG AETR G M++NS  AS P+ FI+ L
Sbjct:   58 KFFCVMSSGILDAPPEQVYTYFVDNSRVHEYNEFCKQVKDLEYLDANTKITWSASGRVGPFKERDFVTRVHYRTASDGSLIIANRAEKHPKAPETERFLRMEIMIGGNVLRPAREADGSLDHSRTNITVLTHVNPGGIAETRLGTMILNSAAASGPIKFIQGL 220          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig122.105.9 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLJ0_ECTSI2.540e-14351.27START domain-containing protein (Fragment) n=1 Tax... [more]
A0A6H5J623_9PHAE3.900e-14350.00START domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A7S2V5A8_9STRA8.030e-5657.23Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
I2CRQ3_NANGC1.750e-5559.72Lipid transfer protein 5-like protein (Fragment) n... [more]
A0A6U4ZLH7_HEMAN5.670e-5452.69Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A7S2RES9_9STRA5.820e-5354.55Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6H5JSI0_9PHAE5.010e-5255.42START domain-containing protein n=1 Tax=Ectocarpus... [more]
D8LAW9_ECTSI3.010e-5143.77START domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A7S0QTI7_9CRYP5.070e-4952.17Hypothetical protein (Fragment) n=2 Tax=Cryptomona... [more]
A0A7S4NFJ2_GUITH1.190e-4853.37Hypothetical protein n=1 Tax=Guillardia theta TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig122contigP-littoralis_Contig122:306657..310478 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7G2E9
PFAMsSTART
Model size2129
Max annot lvl2759|Eukaryota
KEGG koko:K10779
Hectar predicted targeting categorysignal peptide
Exons4
Evalue3.52e-32
EggNOG OGsKOG2761@1|root,KOG2761@2759|Eukaryota
Ec32 ortholog descriptionSTART domain
Ec32 orthologEc-22_001140.1
EC3.6.4.12
Descriptionlipid binding
Cds size2106
COG categoryS
BRITEko00000,ko01000,ko03000,ko03036
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789528.0968819-UTR-P-littoralis_Contig122:306656..3066791680789528.0968819-UTR-P-littoralis_Contig122:306656..306679Pylaiella littoralis U1_48UTRP-littoralis_Contig122 306657..306679 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789528.1098626-CDS-P-littoralis_Contig122:306679..3082181680789528.1098626-CDS-P-littoralis_Contig122:306679..308218Pylaiella littoralis U1_48CDSP-littoralis_Contig122 306680..308218 +
1680789528.1214554-CDS-P-littoralis_Contig122:308710..3088411680789528.1214554-CDS-P-littoralis_Contig122:308710..308841Pylaiella littoralis U1_48CDSP-littoralis_Contig122 308711..308841 +
1680789528.132782-CDS-P-littoralis_Contig122:309692..3097661680789528.132782-CDS-P-littoralis_Contig122:309692..309766Pylaiella littoralis U1_48CDSP-littoralis_Contig122 309693..309766 +
1680789528.1416519-CDS-P-littoralis_Contig122:310116..3104781680789528.1416519-CDS-P-littoralis_Contig122:310116..310478Pylaiella littoralis U1_48CDSP-littoralis_Contig122 310117..310478 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig122.105.9prot_P-littoralis_Contig122.105.9Pylaiella littoralis U1_48polypeptideP-littoralis_Contig122 306680..310478 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig122.105.9

>prot_P-littoralis_Contig122.105.9 ID=prot_P-littoralis_Contig122.105.9|Name=mRNA_P-littoralis_Contig122.105.9|organism=Pylaiella littoralis U1_48|type=polypeptide|length=702bp
MLRQLVAILAATLLSLKSHTTTTACTMALPSGQSLFAASQQQRLRRQDGD
DDYYYDDNNDEHHRHDNHFYLASDTPHIRRNYSAVEDVLGHYPQTGRFGA
KHKSGVLLTSARDPGAGNDKEWEKVEESWTTTLAALAASGTALALRPRPP
EEANHHSCASSSSEKLRQQYRTRRRRRGRRPPRPDDAAAAAAAASKQLHT
ELSSNLQALSSWSRRIRRRASAAKPAAAAAATARRRRRRRSTPYFSTQRA
SAAAAVAARRQLWRLRAQLSGLTAGACCRVESLLFSAQSGEVRLRAMRCG
DLLRRHGRGLLLRSVEMVRRGARAGGKGQEEEEEEEGEWEGSRLALLTDL
TVQNVVDVVARDGWEHVATTKGVVVHRQYIALGPDGTPRTTEEPAPAAVS
AAAAAAGATSAEASAVAGGGSSESPEGTAAAAAEGARSGSNSCSSGTDKA
PQFACVKATAIISVPPEVVYLLFADNSRVGEYNEHCREVKDLQVLSEDSK
ITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSRPVEHPAAPRSSRYV
RSEILLAGNFMRPVPGDPSRTEFLMVTHVNPGGAAETRAGAMLVNSLCAS
SPVTFIRRLEVAAQKLMLELQQQQQQRDRKGSFPAPAEDIGGGDGRCDGD
SVKNKSDGTTTEDEGEGTAGMGLGTVDRREGGAEGREEEFIEGGDKEAAA
AA
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mRNA from alignment at P-littoralis_Contig122:306657..310478+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig122.105.9 ID=mRNA_P-littoralis_Contig122.105.9|Name=mRNA_P-littoralis_Contig122.105.9|organism=Pylaiella littoralis U1_48|type=mRNA|length=3822bp|location=Sequence derived from alignment at P-littoralis_Contig122:306657..310478+ (Pylaiella littoralis U1_48)
GGGGTGGGGTGGTGGATGCCTCAATGCTTCGACAGCTCGTGGCCATCCTG GCTGCAACTCTCCTCTCTTTGAAGAGTCACACTACAACAACGGCGTGTAC CATGGCACTTCCGTCAGGGCAAAGCCTTTTCGCTGCTTCTCAGCAACAGC GCCTGCGCAGGCAGGATGGCGACGATGACTACTACTACGACGACAATAAC GATGAGCACCATCGACATGACAACCACTTCTATCTTGCCTCTGATACCCC CCACATCAGGAGGAACTACTCGGCAGTGGAAGACGTTCTGGGGCACTACC CTCAGACAGGAAGGTTCGGAGCGAAGCACAAGTCCGGAGTGCTTCTTACC TCGGCCCGTGATCCTGGAGCTGGCAACGACAAGGAGTGGGAAAAGGTGGA AGAGTCCTGGACGACCACCCTGGCAGCGTTAGCCGCGTCTGGAACGGCAC TTGCCCTTCGACCGCGGCCCCCCGAAGAAGCAAACCATCACTCTTGTGCA TCGTCTTCTTCTGAAAAATTGCGACAGCAGTACCGAACACGACGACGACG ACGAGGGCGACGGCCGCCACGTCCTGATGATGCTGCTGCAGCTGCAGCTG CCGCGTCAAAACAGCTTCACACAGAGCTCTCCTCGAATCTACAGGCCCTT TCCAGTTGGAGTAGACGAATACGCAGAAGGGCAAGCGCGGCAAAACCAGC AGCAGCAGCAGCAGCAACAGCTCGGCGGCGACGGCGGCGGCGGTCAACGC CTTATTTTTCTACGCAACGCGCTTCGGCGGCAGCAGCAGTGGCGGCGCGG CGGCAGCTTTGGCGATTGAGAGCGCAGCTCTCGGGGCTGACTGCCGGAGC TTGCTGTCGGGTGGAATCCCTCTTATTTTCTGCCCAATCCGGTGAGGTTC GCCTCCGAGCTATGAGGTGTGGGGACTTGCTGCGCCGCCACGGCCGCGGG CTCCTGCTTCGGAGCGTGGAGATGGTGCGGAGGGGGGCCCGTGCGGGTGG AAAGGGGCAGGAGGAGGAGGAGGAGGAGGAAGGGGAGTGGGAGGGCTCAC GGTTGGCCCTTCTCACCGATTTGACGGTGCAGAATGTCGTCGACGTGGTC GCTCGTGACGGCTGGGAGCATGTGGCAACGACAAAGGGGGTCGTGGTGCA TCGGCAGTACATCGCGCTTGGTCCCGATGGCACGCCTAGAACGACGGAAG AACCGGCCCCGGCGGCGGTCTCGGCGGCGGCGGCGGCGGCGGGAGCCACT TCGGCGGAAGCTTCCGCAGTGGCAGGGGGGGGATCATCGGAAAGCCCTGA GGGCACCGCCGCCGCGGCGGCAGAAGGCGCAAGAAGTGGTAGCAATAGCT GCAGCAGTGGTACCGACAAGGCGCCGCAGTTTGCGTGCGTGAAGGCGACG GCGATTATTTCCGTGCCCCCCGAGGTGGTCTACCTCTTGTTCGCGGACAA CTCGAGGGTCGGGGAGTACAACGAGCACTGCCGCGAGGTGAAGGACCTGC AGGTGCTCTCGGAGGATAGTAAGATCACCTGGGCTGCGAGCGGACGGATG GGCCCGTTCAAGGTGTGGATGCTGTGTGTGTGTGTGTGTGTGTGTGTACG TTTCATCCGGTAGCTTTTCCTTTGTTTCAGGCCGGAGAACCTGTTTGTTT GTATTTTGGGGGGCGGGGCGGGAGTACTCTGTTTTTTTCGCCTCAAGTCA CTTGACCATTGAGCCCGCATCCCTACACAATGTTAGGACGGAATACGTCG GGTTACCATCGATCAGACAGACATTGTTTGCGATGCGCCGTGAGGTGGTG GATTACGAGTGCCATGGAGGGTGGGTTGCATCCTGCGAAGAACCGCTTGT TGTGAGGCGGACACCGCTGTCGGCGCTTTGTGCGTTATTTATTCGGAATG TGTACAGTCGTATGGACAGTTTTCAAATAACTGCCCATTTTATTGTATGG GTGTGCCCACTTGTAGACGGTCATGGTGAACTGCCTCGTGCGTATGTTAC CTGACCAAAAAAGATGCACACGACACGCGATGCGATCACCCCCCCTGCTC GTAGGCGCGAGACTTCTGCACGTTGGTCCACTTCCGAACGCTGAGCGACG GCACACTGGCTCAGGTCTCTCGGCCTGTCGAACACCCGGCGGCTCCCCGC AGCAGTCGTTACGTCAGGAGCGAGATCCTCCTTGCGTGAGTGATACGTAG ATACCTCCCGGACGTACATGGGGGTGTTGCCGTGCCGATGTGGTGAATTT GCCAACGATGTAGTACCCAAAGCACAGCACCGTTACAGGAGAAGGAGTTT TTTCATCAACGCACAAAACGTTTGCTCTCTTCTCCTCGGAACCTTTTGAA TTTGTCTTTCGTTGGCAGCACCGGGTCCTTCGTGTCGCAAATCAATGGTC GATGACCAGCGAGCATGCCTTGTGGATACCACTTCTCGAAGGGTTTTGAA GCTGGGGGCTGCCTTCTCGCCATTCACCCAGAGCCTACTGAACACACCCA CGGCGATTGCTTATCTTGTGAAAGACCACCTTCCTACTTTGATGGCTACT TCTGCTGTGGGTGTGTCCAACATGACGGTTTGCACTGCTACCATGGCCAC TCTCACTCGTGTCAAACCATCCTTAGTGCTGTCGTGAAGCCCGCTTACCC TTTTTGTGAGGATTACCTTATTGCTTGAAAACCGACGTTTACTGCTATGA TAACTCCTACGCACATCATTTCCGTGAAAGCCCACAGAACCACTGCGCTC TCCAAGGGCGGGCTCCTCGCACCGCCGTTGTCGCGACCCTCTGTATAGTG CAACTACAGTATCCGGTGTTCGAGAGCCTGGCACGCGTATTGGCTCTTTC ATGGCCTCATCATTCTCGCAAGCCGGACGCATGGTGTACCACTTTTTGCG TAACCTTTGGGCGGGGCCAACCCTTCCCAACATTCCGTTCCGATTTTTAT TCAACATGGCCGGCAATCCGTAGCGCTTCATCCTGTCTATCGCGTTCTGA AAGGTATCCGGCCGTACGTTCGTCTTTACCGCGCAGTGGAAATTTCATGC GGCCAGTTCCTGGGGACCCCTCGAGGACCGAGTTCTTGATGGTGACGCAC GTCAATCCAGGTAATTGTGTCTGTTTTCTTCACACTTGCGGATGGCTTGC TCTCTTGCCTACTTGTTCACTCTGTGTGATGGCAGCACGGTTCTCTCTTC TCGGTCTTCATCTCTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC TCTCTCTCTTCGATTTTTGAAAACTCCAGGGGGGTTTGTTTTTGTTGGAG CATTTTCACGTACTGAGACTCGAGCAACCGCACCACATTGGTGTGTGTGT GTTGACTGCTACTTCGTGAAAGGACCTCTATGCAAACAGACACGGCACGA CAACGATCTCACAACGGGTAGGCCACCCAATCGATCGACGTGTTTCTCTC TGCCCAACAGGAGGCGCCGCGGAGACAAGAGCCGGTGCCATGCTGGTTAA CTCGCTGTGCGCGAGCTCTCCGGTTACGTTCATCCGAAGGTTGGAAGTGG CCGCCCAGAAACTGATGCTCGAGCTTCAGCAGCAGCAGCAGCAGCGGGAT CGGAAGGGGTCTTTTCCCGCCCCGGCAGAGGATATCGGTGGTGGGGATGG TCGGTGTGATGGTGATTCTGTGAAAAACAAAAGCGATGGCACGACAACGG AGGATGAAGGAGAAGGAACGGCAGGGATGGGGCTGGGAACTGTAGATAGG AGAGAAGGAGGAGCAGAAGGAAGAGAAGAAGAGTTCATAGAGGGAGGAGA CAAGGAGGCGGCGGCGGCGGCG
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Coding sequence (CDS) from alignment at P-littoralis_Contig122:306657..310478+

>mRNA_P-littoralis_Contig122.105.9 ID=mRNA_P-littoralis_Contig122.105.9|Name=mRNA_P-littoralis_Contig122.105.9|organism=Pylaiella littoralis U1_48|type=CDS|length=2106bp|location=Sequence derived from alignment at P-littoralis_Contig122:306657..310478+ (Pylaiella littoralis U1_48)
ATGCTTCGACAGCTCGTGGCCATCCTGGCTGCAACTCTCCTCTCTTTGAA
GAGTCACACTACAACAACGGCGTGTACCATGGCACTTCCGTCAGGGCAAA
GCCTTTTCGCTGCTTCTCAGCAACAGCGCCTGCGCAGGCAGGATGGCGAC
GATGACTACTACTACGACGACAATAACGATGAGCACCATCGACATGACAA
CCACTTCTATCTTGCCTCTGATACCCCCCACATCAGGAGGAACTACTCGG
CAGTGGAAGACGTTCTGGGGCACTACCCTCAGACAGGAAGGTTCGGAGCG
AAGCACAAGTCCGGAGTGCTTCTTACCTCGGCCCGTGATCCTGGAGCTGG
CAACGACAAGGAGTGGGAAAAGGTGGAAGAGTCCTGGACGACCACCCTGG
CAGCGTTAGCCGCGTCTGGAACGGCACTTGCCCTTCGACCGCGGCCCCCC
GAAGAAGCAAACCATCACTCTTGTGCATCGTCTTCTTCTGAAAAATTGCG
ACAGCAGTACCGAACACGACGACGACGACGAGGGCGACGGCCGCCACGTC
CTGATGATGCTGCTGCAGCTGCAGCTGCCGCGTCAAAACAGCTTCACACA
GAGCTCTCCTCGAATCTACAGGCCCTTTCCAGTTGGAGTAGACGAATACG
CAGAAGGGCAAGCGCGGCAAAACCAGCAGCAGCAGCAGCAGCAACAGCTC
GGCGGCGACGGCGGCGGCGGTCAACGCCTTATTTTTCTACGCAACGCGCT
TCGGCGGCAGCAGCAGTGGCGGCGCGGCGGCAGCTTTGGCGATTGAGAGC
GCAGCTCTCGGGGCTGACTGCCGGAGCTTGCTGTCGGGTGGAATCCCTCT
TATTTTCTGCCCAATCCGGTGAGGTTCGCCTCCGAGCTATGAGGTGTGGG
GACTTGCTGCGCCGCCACGGCCGCGGGCTCCTGCTTCGGAGCGTGGAGAT
GGTGCGGAGGGGGGCCCGTGCGGGTGGAAAGGGGCAGGAGGAGGAGGAGG
AGGAGGAAGGGGAGTGGGAGGGCTCACGGTTGGCCCTTCTCACCGATTTG
ACGGTGCAGAATGTCGTCGACGTGGTCGCTCGTGACGGCTGGGAGCATGT
GGCAACGACAAAGGGGGTCGTGGTGCATCGGCAGTACATCGCGCTTGGTC
CCGATGGCACGCCTAGAACGACGGAAGAACCGGCCCCGGCGGCGGTCTCG
GCGGCGGCGGCGGCGGCGGGAGCCACTTCGGCGGAAGCTTCCGCAGTGGC
AGGGGGGGGATCATCGGAAAGCCCTGAGGGCACCGCCGCCGCGGCGGCAG
AAGGCGCAAGAAGTGGTAGCAATAGCTGCAGCAGTGGTACCGACAAGGCG
CCGCAGTTTGCGTGCGTGAAGGCGACGGCGATTATTTCCGTGCCCCCCGA
GGTGGTCTACCTCTTGTTCGCGGACAACTCGAGGGTCGGGGAGTACAACG
AGCACTGCCGCGAGGTGAAGGACCTGCAGGTGCTCTCGGAGGATAGTAAG
ATCACCTGGGCTGCGAGCGGACGGATGGGCCCGTTCAAGGCGCGAGACTT
CTGCACGTTGGTCCACTTCCGAACGCTGAGCGACGGCACACTGGCTCAGG
TCTCTCGGCCTGTCGAACACCCGGCGGCTCCCCGCAGCAGTCGTTACGTC
AGGAGCGAGATCCTCCTTGCTGGAAATTTCATGCGGCCAGTTCCTGGGGA
CCCCTCGAGGACCGAGTTCTTGATGGTGACGCACGTCAATCCAGGAGGCG
CCGCGGAGACAAGAGCCGGTGCCATGCTGGTTAACTCGCTGTGCGCGAGC
TCTCCGGTTACGTTCATCCGAAGGTTGGAAGTGGCCGCCCAGAAACTGAT
GCTCGAGCTTCAGCAGCAGCAGCAGCAGCGGGATCGGAAGGGGTCTTTTC
CCGCCCCGGCAGAGGATATCGGTGGTGGGGATGGTCGGTGTGATGGTGAT
TCTGTGAAAAACAAAAGCGATGGCACGACAACGGAGGATGAAGGAGAAGG
AACGGCAGGGATGGGGCTGGGAACTGTAGATAGGAGAGAAGGAGGAGCAG
AAGGAAGAGAAGAAGAGTTCATAGAGGGAGGAGACAAGGAGGCGGCGGCG
GCGGCG
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