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Homology
BLAST of mRNA_P-littoralis_Contig121.95.1 vs. uniprot
Match: A0A6H5JAT4_9PHAE (CAF1C_H4-bd domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAT4_9PHAE) HSP 1 Score: 863 bits (2229), Expect = 7.760e-305 Identity = 412/428 (96.26%), Postives = 420/428 (98.13%), Query Frame = 2
Query: 314 VSAANEEAEERMITEEYKVWKKNTPFLYDVVMTHALEWPSLTVQWLPSVKSQESKDYAVHKLVLGTHTSGSEQNYLMVANVNLPVPGAEIDNRTYDDEKGEMGGFGGVHGKVEVTVKINHDGEVNRARYMPQNEFVIATKSPSADVCVFDISKHPSVPPSNGGCRPEHRCKGHTKEGYGLSWNPHVEGRLLSGSDDGLVCYWDLKGAGQTVEATQKFEGHTSVVGDVAWHQQNPKLFGSVGDDKQLLFWDTSMDGSKPTTVIPNAHSANINCLAFNPFNEFLLATGSSDTTVALWDMRNMAKPMHLLERHSSEGGDGEVLGVQWASFDETILGSCSADRRVKVWSLSRIGEEQSPEDAEDGPPELLFIHGGHTSRVGDFSWNTNDDWVCASVSEDNILQVWQMAENIYAEEAE-VEDPEEVEDQDLED 1594
VSAANEEAEE+MITEEYKVWKKNTPFLYDVVMTHALEWPSLTVQWLPSVKSQESKDYAVHKLVLGTHTSGSEQNYLMVANVNLPVPGAEIDNRTYDDEKGEMGGFGGVHGKV+VTVKINHDGEVNRARYMPQNEFVIATKSPSADVCVFDISKHPSVPPSN GCRPEHRCKGHTKEGYGLSWNPHVEGRLLSGSDDGLVCYWD+KGAGQTV+ATQKFEGHTSVVGDVAWHQQNPKL GSVGDD+QLLFWDTSMDGSKPTTVI +AHSANINCLAFNPF+EFLLATGSSDTTVALWDMRNM KPMHLLERHSSE GDGEVLGVQWASFDETILGSCSADRRVKVWSLSRIGEEQSPEDAEDGPPELLFIHGGHTSRVGDFSWN NDDWVCASVSEDNILQVWQMAENIYAEEAE EDP+EVEDQDLED
Sbjct: 75 VSAANEEAEEKMITEEYKVWKKNTPFLYDVVMTHALEWPSLTVQWLPSVKSQESKDYAVHKLVLGTHTSGSEQNYLMVANVNLPVPGAEIDNRTYDDEKGEMGGFGGVHGKVDVTVKINHDGEVNRARYMPQNEFVIATKSPSADVCVFDISKHPSVPPSNSGCRPEHRCKGHTKEGYGLSWNPHVEGRLLSGSDDGLVCYWDIKGAGQTVDATQKFEGHTSVVGDVAWHQQNPKLLGSVGDDRQLLFWDTSMDGSKPTTVIKDAHSANINCLAFNPFSEFLLATGSSDTTVALWDMRNMGKPMHLLERHSSEAGDGEVLGVQWASFDETILGSCSADRRVKVWSLSRIGEEQSPEDAEDGPPELLFIHGGHTSRVGDFSWNMNDDWVCASVSEDNILQVWQMAENIYAEEAENEEDPDEVEDQDLED 502
BLAST of mRNA_P-littoralis_Contig121.95.1 vs. uniprot
Match: A0A067C0K8_SAPPC (Histone-binding protein RBBP4 n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C0K8_SAPPC) HSP 1 Score: 536 bits (1382), Expect = 2.290e-178 Identity = 258/429 (60.14%), Postives = 308/429 (71.79%), Query Frame = 2
Query: 308 NDVSAANEEAEERMITEEYKVWKKNTPFLYDVVMTHALEWPSLTVQWLPSVKSQESKDYAVHKLVLGTHTSGSEQNYLMVANVNLPVPGAEIDNRTYDDEKGEMGGFGGVHGKVEVTVKINHDGEVNRARYMPQNEFVIATKSPSADVCVFDISKHPSVPPSNGGCRPEHRCKGHTKEGYGLSWNPHVEGRLLSGSDDGLVCYWDLKGAGQTVEATQKFEGHTSVVGDVAWHQQNPKLFGSVGDDKQLLFWDTSMDG-SKPTTVIPNAHSANINCLAFNPFNEFLLATGSSDTTVALWDMRNMAKPMHLLERHSSEGGDGEVLGVQWASFDETILGSCSADRRVKVWSLSRIGEEQSPEDAEDGPPELLFIHGGHTSRVGDFSWNTNDDWVCASVSEDNILQVWQMAENIYAEEAEVEDPEEVEDQDLE 1591
+D A+ A+ER+I EEYK+WKKNTPFLYD+VMTHALEWPSL+VQWLPS + +DY+ HKL+LGTHTS QNYLMVA V LP+ EID R YDDE E+GGFGGV GKVEV +KINHDGEVNRARYMP NE ++ATK+ S++V VFDISKHPS P GC P++R GHTKEGYGL W+PH L+SGSDDG+VC WDL AG+TV+ K+ GHT ++ DVAWH + KLFGSVGDDK+LL WD + KP T I NAH + +NC++F+PF+E+LLATGSSD TV LWDMRN++ +H HS S+IGEEQSPEDAEDGPPELLFIHGGHT+++ DFSWN ND WV ASV+EDN+LQ+WQMAENIY EEA+ ED E V D LE
Sbjct: 10 SDAEDASTSAQERVIAEEYKIWKKNTPFLYDLVMTHALEWPSLSVQWLPSSHTSSGQDYSSHKLLLGTHTSDGAQNYLMVAEVRLPLEDTEIDARNYDDESAELGGFGGVSGKVEVQIKINHDGEVNRARYMPSNELIVATKTVSSEVYVFDISKHPSTPAEGTGCNPDYRLLGHTKEGYGLCWDPHQAHHLISGSDDGVVCEWDLANAGKTVQPLNKYTGHTDIIEDVAWHMHHQKLFGSVGDDKKLLIWDMRLKSYDKPMTSI-NAHDSEVNCVSFSPFSEYLLATGSSDKTVNLWDMRNLSSKLHTFSGHSXXXXXXXXXXXXXXXXXXXXX-----XXXXXXXXXSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNDPWVVASVAEDNVLQIWQMAENIYNEEADDED-EAVADDALE 431
BLAST of mRNA_P-littoralis_Contig121.95.1 vs. uniprot
Match: UPI000F0A2907 (histone-binding protein RBBP7 isoform X1 n=2 Tax=Characiphysae TaxID=186628 RepID=UPI000F0A2907) HSP 1 Score: 533 bits (1372), Expect = 7.680e-177 Identity = 255/419 (60.86%), Postives = 317/419 (75.66%), Query Frame = 2
Query: 311 DVSAANEEAEERMITEEYKVWKKNTPFLYDVVMTHALEWPSLTVQWLPSVKSQESKDYAVHKLVLGTHTSGSEQNYLMVANVNLPVPGAEIDNRTYDDEKG-EMGGFGGVHGKVEVTVKINHDGEVNRARYMPQNEFVIATKSPSADVCVFDISKHPSVPPSNGGCRPEHRCKGHTKEGYGLSWNPHVEGRLLSGSDDGLVCYWDLKGA---GQTVEATQKFEGHTSVVGDVAWHQQNPKLFGSVGDDKQLLFWDT-SMDGSKPTTVIPNAHSANINCLAFNPFNEFLLATGSSDTTVALWDMRNMAKPMHLLERHSSEGGDGEVLG--VQWASFDETILGSCSADRRVKVWSLSRIGEEQSPEDAEDGPPELLFIHGGHTSRVGDFSWNTNDDWVCASVSEDNILQVWQMAENIYAEE 1546
D ++ EER+I EEYK+WKKNTPFLYD+VMTHALEWPSLTVQWLP V E KDYAVH+LVLGTHTS EQN+L++A+V +P A+ D YD EKG E GGFG V GK+E+ +KINH+GEVNRARYMPQN +IATK+P++DV VFD +KHPS P +G C P+ R +GH KEGYGLSWNP++ G LLS SDD +C WD+ G+ G+ V+A F GHT+VV DV+WH + LFGSV DD++L+ WDT S + SKP+ + +AH+A +NCL+FNP++EF+LATGS+D TVALWD+RN+ +H E H E + VQW+ +ETIL S DRR+ VW LS+IGEEQS EDAEDGPPELLFIHGGHT+++ DFSWN N+ WV SVSEDNI+QVWQMAENIY +E
Sbjct: 3 DKEVYDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRLEGKDYAVHRLVLGTHTS-DEQNHLVIASVQIPNDDAQFDASHYDSEKGAEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECSPDLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISGSPKEGKIVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSV-DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQFLHITRQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDE 419
BLAST of mRNA_P-littoralis_Contig121.95.1 vs. uniprot
Match: A0A7N0ZTV0_KALFE (CAF1C_H4-bd domain-containing protein n=2 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0ZTV0_KALFE) HSP 1 Score: 524 bits (1350), Expect = 1.200e-173 Identity = 246/414 (59.42%), Postives = 311/414 (75.12%), Query Frame = 2
Query: 332 EAEERMITEEYKVWKKNTPFLYDVVMTHALEWPSLTVQWLPSVKSQESKDYAVHKLVLGTHTSGSEQNYLMVANVNLPVPGAEIDNRTYDDEKGEMGGFGGVHGKVEVTVKINHDGEVNRARYMPQNEFVIATKSPSADVCVFDISKHPSVPPSNGGCRPEHRCKGHTKEGYGLSWNPHVEGRLLSGSDDGLVCYWDLKGA--GQTVEATQKFEGHTSVVGDVAWHQQNPKLFGSVGDDKQLLFWDT-SMDGSKPTTVIPNAHSANINCLAFNPFNEFLLATGSSDTTVALWDMRNMAKPMHLLERHSSEGGDGEVLGVQWASFDETILGSCSADRRVKVWSLSRIGEEQSPEDAEDGPPELLFIHGGHTSRVGDFSWNTNDDWVCASVSEDNILQVWQMAENIYAEEAEVEDP 1564
E EER+I EEYK+WKKNTPFLYD+++THALEWPSLT++WLPS + KDY+V KL+LGTHTS E NYLM+A V LP+ +E D R YDD++ E GGFG +GKV+V +INH+GEVNRARYMPQN F+IATK+ SA+V VFD SKHPS PP++G C P+ R +GH EGYGLSW+P +G LLSGSDD +C WD+ + ++ATQ F+ H VV DVAWH ++ LFGSVGDD+ LL WD S +KP + AH++ +NCLAFNPFNE+++ATGS+D TV L+D+R ++ +H+ + H E V V W+ +ETIL SC RR+ VW LSRI EEQSPEDAEDGPPELLFIHGGHTS++ DFSWN +DWV ASV+EDNILQ+WQMAENIY ++ ++ P
Sbjct: 11 ELEERIINEEYKIWKKNTPFLYDLIITHALEWPSLTIEWLPSREEPPGKDYSVQKLILGTHTSEGEPNYLMLAQVQLPLEDSENDARHYDDDRSEFGGFGSANGKVQVIQQINHEGEVNRARYMPQNPFIIATKTVSAEVYVFDYSKHPSKPPADGECNPDLRLRGHNSEGYGLSWSPFKQGHLLSGSDDAQICLWDINATPKNKALDATQIFKVHEGVVEDVAWHMRHEYLFGSVGDDRLLLLWDLRSPVANKPANSVM-AHNSEVNCLAFNPFNEWVVATGSTDKTVKLFDLRKLSAALHVFDSHKEE-----VFQVGWSPTNETILASCCLGRRLMVWDLSRIDEEQSPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVVASVAEDNILQIWQMAENIYHDDDDLPPP 418
BLAST of mRNA_P-littoralis_Contig121.95.1 vs. uniprot
Match: A0A8J5CN42_CHIOP (Putative histone-binding protein Caf1 n=2 Tax=Chionoecetes opilio TaxID=41210 RepID=A0A8J5CN42_CHIOP) HSP 1 Score: 526 bits (1355), Expect = 1.640e-173 Identity = 246/427 (57.61%), Postives = 306/427 (71.66%), Query Frame = 2
Query: 338 EERMITEEYKVWKKNTPFLYDVVMTHALEWPSLTVQWLPSVKSQESKDYAVHKLVLGTHTSGSEQNYLMVANVNLPVPGAEIDNRTYDDEKGEMGGFGGVHGKVEVTVKINHDGEVNRARYMPQNEFVIATKSPSADVCVFDISKHPSVPPSNGGCRPEHRCKGHTKEGYGLSWNPHVEGRLLSGSDDGLVCYWDLKGA---GQTVEATQKFEGHTSVVGDVAWHQQNPKLFGSVGDDKQLLFWDTSMDGSKPTTVIPNAHSANINCLAFNPFNEFLLATGSSDTTVALWDMRNMAKPMHLLERHSSE---------------------GGDGEVLGVQWASFDETILGSCSADRRVKVWSLSRIGEEQSPEDAEDGPPELLFIHGGHTSRVGDFSWNTNDDWVCASVSEDNILQVWQMAENIYAEE 1546
EER+I EEYK+WKKNTPFLYD+VMTHALEWPSLT QWLP V E KDY++H+L+LGTHTS EQN+L++A+V LP A+ D YD+EKGE GGFG V GK+E+ +KINH+GEVNRARYMPQN VIATK+PS+DV VFD +KHPS P +G C P+ R +GH KEGYGLSWNP++ G LLS SDD +C WD+ + ++A F GHT+VV DVAWH + LFGSV DD++L+ WDT + + + +AH+A +NCL+FNP++EF+LATGS+D TVALWD+RN++ +H H E VQW+ +ETIL S DRR+ VW LS+IGEEQS EDAEDGPPELLFIHGGHT+++ DFSWN N+ WV SVSEDNI+QVWQMAENIY +E
Sbjct: 46 EERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSIHRLILGTHTS-DEQNHLLIASVQLPNEDAQFDASHYDNEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPSGECHPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRANNTNKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLSLKLHSFAMHKDEIFQXXXXXXXXXXXXXXXXXXXXXXXXXXVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDE 471
BLAST of mRNA_P-littoralis_Contig121.95.1 vs. uniprot
Match: A0A0P1A618_PLAHL (Histone-binding protein rbbp4 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A618_PLAHL) HSP 1 Score: 523 bits (1348), Expect = 3.280e-173 Identity = 248/427 (58.08%), Postives = 311/427 (72.83%), Query Frame = 2
Query: 317 SAANEEA-EERMITEEYKVWKKNTPFLYDVVMTHALEWPSLTVQWLPSVKSQESKDYAVHKLVLGTHTSGSEQNYLMVANVNLPVPGAEIDNRTYDDEKGEMGGFGGVHGKVEVTVKINHDGEVNRARYMPQNEFVIATKSPSADVCVFDISKHPSVPPSNGGCRPEHRCKGHTKEGYGLSWNPHVEGRLLSGSDDGLVCYWDLKGAGQTVEATQKFEGHTSVVGDVAWHQQNPKLFGSVGDDKQLLFWDTSMDG-SKPTTVIPNAHSANINCLAFNPFNEFLLATGSSDTTVALWDMRNMAKPMHLLERHSSEGGDGEVLGVQWASFDETILGSCSADRRVKVWSLSRIGEEQSPEDAEDGPPELLFIHGGHTSRVGDFSWNTNDDWVCASVSEDNILQVWQMAENIYAEEAEVEDPEEVEDQDLE 1591
+AAN+ A +E++I EEYK+WKKNTPFLYD+VMTHALEWPSL+VQWLP+ D++VHKL+LGTHTSG+EQNYLMVA V LP+ EID R YD+E E+GGFGGV GKV++ +++NHDGEVNRARYMP +E V+ATK+P A+V VF+ISK PS P N GC P++R GH+KEGYGL W+PH L+SGSDD ++C WD+ AG+++E K+ GH V+ DVAWH N K+FGSVGDDK+LL WD + KP T++ AH+A +NCLAF+PF+E+L+ATGS+D V LWDMRNM +H E H+ LS+IG+EQ+PEDAEDGPPELLFIHGGHTS++ DFSWN ND WV ASV+EDN+LQ+WQMAENIY EE E E EEV ++DLE
Sbjct: 17 NAANDAALQEKLINEEYKIWKKNTPFLYDLVMTHALEWPSLSVQWLPNSHISAGDDFSVHKLLLGTHTSGAEQNYLMVAEVRLPLEDTEIDARKYDEESQELGGFGGVSGKVDIKIRVNHDGEVNRARYMPSDELVVATKTPHAEVHVFNISKRPSQPEQNSGCDPDYRLLGHSKEGYGLCWDPHQPFHLISGSDDAIICEWDISNAGKSLEPLHKYSGHCDVIEDVAWHMHNTKIFGSVGDDKKLLIWDMRSESFDKPATIV-YAHTAEVNCLAFSPFSEYLIATGSADKHVNLWDMRNMKAKLHSFEGHNDXXXXXXXXXXXXXXXXXXXX-----XXXXXXXXLSKIGDEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPNDPWVVASVAEDNVLQIWQMAENIYNEEDETEQ-EEVAEEDLE 436
BLAST of mRNA_P-littoralis_Contig121.95.1 vs. uniprot
Match: A0A7K4VS08_9EMBE (RBBP4 protein (Fragment) n=4 Tax=Gnathostomata TaxID=7776 RepID=A0A7K4VS08_9EMBE) HSP 1 Score: 523 bits (1346), Expect = 5.460e-173 Identity = 253/424 (59.67%), Postives = 316/424 (74.53%), Query Frame = 2
Query: 314 VSAANEEA-EERMITEEYKVWKKNTPFLYDVVMTHALEWPSLTVQWLPSVKSQESKDYAVHKLVLGTHTSGSEQNYLMVANVNLPVPGAEIDNRTYDDEKGEMGGFGGVHGKVEVTVKINHDGEVNRARYMPQNEFVIATKSPSADVCVFDISKHPSVPPSNGGCRPEHRCKGHTKEGYGLSWNPHVEGRLLSGSDDGLVCYWDLKGA---GQTVEATQKFEGHTSVVGDVAWHQQNPKLFGSVGDDKQLLFWDT-SMDGSKPTTVIPNAHSANINCLAFNPFNEFLLATGSSDTTVALWDMRNMAKPMHLLERHSSEGGDGEVLGVQWASFDETILGSCSAD-RRVKVWSLSRIGEEQSPEDAEDGPPELLFIHGGHTSRVGDFSWNTNDDWVCASVSEDNILQVWQMAENIYAEEAEVEDPE 1567
SAA ++A EER+I EEYK+WKKNTPFLYD+VMTHALEWPSLT QWLP V E KD+++H+LVLGTHTS EQN+L++A+V LP A+ D YD EKGE GGFG V GK+E+ +KINH+GEVNRARYMPQN +IATK+PS+DV VFD +KHPS P +G C P+ R +GH KEGYGLSWNP++ G LLS SDD +C WD+ G+ V+A F GHT+VV DV+WH + LFGSV DD++L+ WDT S + SKP+ + +AH+A +NCL+FNP++EF+LATGS+D TVALWD+RN+ +H E H E + + D +L S + RR+ VW LS+IGEEQSPEDAEDGPPELLFIHGGHT+++ DFSWN N+ WV SVSEDNI+QVWQMAENIY +E DPE
Sbjct: 4 TSAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTS-DEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSV-DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVLKKPLSFILTDSLLLSSLEKENRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDE----DPE 421
BLAST of mRNA_P-littoralis_Contig121.95.1 vs. uniprot
Match: A0A2H9ZTZ8_9ASPA (WD-40 repeat-containing protein MSI1 n=6 Tax=Orchidaceae TaxID=4747 RepID=A0A2H9ZTZ8_9ASPA) HSP 1 Score: 522 bits (1344), Expect = 8.480e-173 Identity = 253/408 (62.01%), Postives = 303/408 (74.26%), Query Frame = 2
Query: 332 EAEERMITEEYKVWKKNTPFLYDVVMTHALEWPSLTVQWLPSVKSQESKDYAVHKLVLGTHTSGSEQNYLMVANVNLPVPGAEIDNRTYDDEKGEMGGFGGVHGKVEVTVKINHDGEVNRARYMPQNEFVIATKSPSADVCVFDISKHPSVPPSNGGCRPEHRCKGHTKEGYGLSWNPHVEGRLLSGSDDGLVCYWDLKGA--GQTVEATQKFEGHTSVVGDVAWHQQNPKLFGSVGDDKQLLFWDT-SMDGSKPTTVIPNAHSANINCLAFNPFNEFLLATGSSDTTVALWDMRNMAKPMHLLERHSSEGGDGEVLGVQWASFDETILGSCSADRRVKVWSLSRIGEEQSPEDAEDGPPELLFIHGGHTSRVGDFSWNTNDDWVCASVSEDNILQVWQMAENIYAEE 1546
E EER+I EEYK+WKKNTPFLYD+V+THALEWPSLTVQWLP KDY+V K++LGTHTS +E NYLM+A V LP+ AE D R YDDE+GE+GGFG GKV+V +INHDGEVNRARYMPQN FVIATK+ SADV VFD SKHPS PP +G C P+ R KGHT EGYGLSW+ +G LLSGSDD +C WD+ ++++A Q F+ H VV DVAWH ++ LFGSVGDD+ LL WD + SKP + AH +NCLAFNPFNE+++ATGS+D TV L+D+R M +H + H E V V W+ +ETIL SC RR+ VW LSRI EEQ+PEDAEDGPPELLFIHGGHTS++ DFSWN +DWV ASV+EDNILQ+WQMAENIY +E
Sbjct: 11 EIEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVQWLPDRDEPPGKDYSVQKMILGTHTSDNEPNYLMLAQVQLPLEDAENDARQYDDERGEIGGFGCSSGKVQVIQQINHDGEVNRARYMPQNPFVIATKTVSADVYVFDYSKHPSKPPLDGTCNPDLRLKGHTTEGYGLSWSLFKQGHLLSGSDDAQICLWDINATPKNKSLDALQIFKVHDGVVEDVAWHLRHEYLFGSVGDDQHLLIWDLRNSTASKPIQSVL-AHQGEVNCLAFNPFNEWVVATGSTDKTVKLFDLRKMNSALHTFDCHREE-----VFQVGWSPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVIASVAEDNILQIWQMAENIYHDE 412
BLAST of mRNA_P-littoralis_Contig121.95.1 vs. uniprot
Match: UPI001C4C3D16 (WD-40 repeat-containing protein MSI1-like n=2 Tax=Zingiber officinale TaxID=94328 RepID=UPI001C4C3D16) HSP 1 Score: 521 bits (1342), Expect = 1.570e-172 Identity = 245/407 (60.20%), Postives = 299/407 (73.46%), Query Frame = 2
Query: 332 EAEERMITEEYKVWKKNTPFLYDVVMTHALEWPSLTVQWLPSVKSQESKDYAVHKLVLGTHTSGSEQNYLMVANVNLPVPGAEIDNRTYDDEKGEMGGFGGVHGKVEVTVKINHDGEVNRARYMPQNEFVIATKSPSADVCVFDISKHPSVPPSNGGCRPEHRCKGHTKEGYGLSWNPHVEGRLLSGSDDGLVCYWDLKGA--GQTVEATQKFEGHTSVVGDVAWHQQNPKLFGSVGDDKQLLFWDTSMDGSKPTTVIPNAHSANINCLAFNPFNEFLLATGSSDTTVALWDMRNMAKPMHLLERHSSEGGDGEVLGVQWASFDETILGSCSADRRVKVWSLSRIGEEQSPEDAEDGPPELLFIHGGHTSRVGDFSWNTNDDWVCASVSEDNILQVWQMAENIYAEE 1546
E EER+I EEYK+WKKNTPFLYD+V+THALEWPSLTVQW P KDY+V K++LGTHTS +E NYLM+A V LP+ AE D R YDDE GE+GGFG GKV++ +INHDGEVNRARYMPQN F+IATK+ SA+V VFD SKHPS PP +G C P+ R +GH EGYGLSW+ +G LLSGSDD +C WD+ A +T++A Q F+ H VV DVAWH ++ FGSVGDD LL WD +KP + AH +NCLAFNPFNE+++ATGS+D TV L+D+R + +H L+ H E V V W+ +ETIL SC RR+ VW LSRI EEQ+PEDA DGPPELLFIHGGHTS++ DFSWN+ +DW+ ASV+EDNILQ+WQMAENIY +E
Sbjct: 11 ELEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVQWFPDRDEPAGKDYSVQKMILGTHTSDNEPNYLMLAQVQLPLEDAEYDARQYDDEHGEIGGFGSAGGKVQIVQQINHDGEVNRARYMPQNTFIIATKTVSAEVYVFDYSKHPSKPPLDGACNPDLRLRGHNSEGYGLSWSQFKQGHLLSGSDDAQICLWDINAAPKNKTLDALQIFKVHDGVVEDVAWHLRHEYYFGSVGDDHYLLLWDLRTTNNKPVKSVV-AHQGEVNCLAFNPFNEWIVATGSTDKTVKLFDLRKLETALHTLDCHKEE-----VFQVGWSPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAADGPPELLFIHGGHTSKISDFSWNSCEDWIVASVAEDNILQIWQMAENIYHDE 411
BLAST of mRNA_P-littoralis_Contig121.95.1 vs. uniprot
Match: A0A833R4V8_9POAL (Multicopy suppressor of IRA1 n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833R4V8_9POAL) HSP 1 Score: 518 bits (1335), Expect = 1.870e-171 Identity = 246/404 (60.89%), Postives = 300/404 (74.26%), Query Frame = 2
Query: 332 EAEERMITEEYKVWKKNTPFLYDVVMTHALEWPSLTVQWLPSVKSQESKDYAVHKLVLGTHTSGSEQNYLMVANVNLPVPGAEIDNRTYDDEKGEMGGFGGVHGKVEVTVKINHDGEVNRARYMPQNEFVIATKSPSADVCVFDISKHPSVPPSNGGCRPEHRCKGHTKEGYGLSWNPHVEGRLLSGSDDGLVCYWDLKG--AGQTVEATQKFEGHTSVVGDVAWHQQNPKLFGSVGDDKQLLFWDTSMDGSKPTTVIPNAHSANINCLAFNPFNEFLLATGSSDTTVALWDMRNMAKPMHLLERHSSEGGDGEVLGVQWASFDETILGSCSADRRVKVWSLSRIGEEQSPEDAEDGPPELLFIHGGHTSRVGDFSWNTNDDWVCASVSEDNILQVWQMAENIY 1537
E EER+I EEYK+WKKNTPFLYD+V+THALEWPSLTVQWLP KDY+V K+VLGTHTS +E NYLM+A V LPV AE D R Y+DE GE+GGFG GKV++ +INHDGEVNRARYMPQN+F+IATK+ SA+V VFD SKHPS PP +G C P+ R +GH+ EGYGLSW+ +G LLSGSDD +C WD+KG +T++A Q F+ H VV DVAWH ++ LFGSVGDD LL WD +P + AH +NCLAFNPFNE+++ATGS+D TV L+D+R ++ +H + H + V V W+ +ETIL SC RR+ VW LSRI EQ+PEDAEDGPPELLFIHGGHTS++ DFSWN +DWV ASV+EDNILQ+WQMAENIY
Sbjct: 11 EIEERLINEEYKIWKKNTPFLYDLVVTHALEWPSLTVQWLPDRDEPAGKDYSVQKMVLGTHTSDNEPNYLMLAQVQLPVEDAEGDARQYEDEHGEIGGFGCATGKVQIIQQINHDGEVNRARYMPQNQFIIATKTVSAEVYVFDYSKHPSKPPLDGTCNPDLRLRGHSSEGYGLSWSVFKDGHLLSGSDDAQICMWDIKGNSKNKTLDALQIFKYHEGVVEDVAWHLRHEYLFGSVGDDHHLLIWDLRSRSQQPVEKVV-AHQGEVNCLAFNPFNEWVVATGSTDKTVKLFDLRKISTALHTFDCHKED-----VFQVGWSPKNETILASCCLGRRLMVWDLSRIDAEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVIASVAEDNILQIWQMAENIY 408
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Stop | 1 |
| Start | 1 |
| Seed ortholog | 112098.XP_008621591.1 |
| Preferred name | RBBP4 |
| PFAMs | CAF1C_H4-bd,WD40 |
| Model size | 3232 |
| Max annot lvl | 2759|Eukaryota |
| KEGG ko | ko:K10752,ko:K11659 |
| KEGG Pathway | ko04218,map04218 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000003,GO:0000070,GO:0000118,GO:0000122,GO:0000228,GO:0000278,GO:0000280,GO:0000281,GO:0000775,GO:0000776,GO:0000777,GO:0000778,GO:0000779,GO:0000780,GO:0000785,GO:0000790,GO:0000793,GO:0000794,GO:0000819,GO:0000910,GO:0000976,GO:0000977,GO:0000978,GO:0000987,GO:0001012,GO:0001067,GO:0001558,GO:0001708,GO:0002064,GO:0002065,GO:0002066,GO:0002244,GO:0002376,GO:0002520,GO:0003002,GO:0003006,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003723,GO:0003824,GO:0004407,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005667,GO:0005694,GO:0005700,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006277,GO:0006281,GO:0006323,GO:0006325,GO:0006333,GO:0006334,GO:0006335,GO:0006336,GO:0006338,GO:0006342,GO:0006351,GO:0006355,GO:0006357,GO:0006464,GO:0006473,GO:0006475,GO:0006476,GO:0006479,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007059,GO:0007076,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007304,GO:0007306,GO:0007307,GO:0007346,GO:0007379,GO:0007389,GO:0007548,GO:0008150,GO:0008152,GO:0008213,GO:0008283,GO:0008284,GO:0008285,GO:0008406,GO:0009058,GO:0009059,GO:0009266,GO:0009408,GO:0009611,GO:0009628,GO:0009653,GO:0009719,GO:0009725,GO:0009790,GO:0009792,GO:0009887,GO:0009888,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010033,GO:0010035,GO:0010038,GO:0010286,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010564,GO:0010605,GO:0010629,GO:0010927,GO:0010948,GO:0014070,GO:0016043,GO:0016070,GO:0016458,GO:0016569,GO:0016570,GO:0016571,GO:0016573,GO:0016575,GO:0016580,GO:0016581,GO:0016584,GO:0016589,GO:0016787,GO:0016810,GO:0016811,GO:0017053,GO:0018130,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0019213,GO:0019219,GO:0019222,GO:0019438,GO:0019538,GO:0019899,GO:0019953,GO:0022402,GO:0022412,GO:0022414,GO:0022607,GO:0030097,GO:0030154,GO:0030261,GO:0030308,GO:0030703,GO:0030707,GO:0030855,GO:0031010,GO:0031055,GO:0031099,GO:0031101,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031497,GO:0031519,GO:0031523,GO:0031974,GO:0031981,GO:0032221,GO:0032259,GO:0032501,GO:0032502,GO:0032504,GO:0032774,GO:0032989,GO:0032991,GO:0033186,GO:0033554,GO:0033558,GO:0033698,GO:0033993,GO:0034080,GO:0034508,GO:0034605,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0034708,GO:0034723,GO:0034724,GO:0034728,GO:0035035,GO:0035097,GO:0035098,GO:0035239,GO:0035282,GO:0035295,GO:0035601,GO:0036211,GO:0040007,GO:0040008,GO:0040029,GO:0040035,GO:0042060,GO:0042127,GO:0042221,GO:0042246,GO:0042393,GO:0042766,GO:0042802,GO:0042803,GO:0042826,GO:0043044,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0043486,GO:0043543,GO:0043565,GO:0043687,GO:0043933,GO:0044085,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0044703,GO:0045137,GO:0045138,GO:0045165,GO:0045786,GO:0045814,GO:0045892,GO:0045926,GO:0045934,GO:0046483,GO:0046661,GO:0046689,GO:0046983,GO:0048285,GO:0048468,GO:0048477,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048545,GO:0048546,GO:0048557,GO:0048562,GO:0048565,GO:0048566,GO:0048568,GO:0048589,GO:0048598,GO:0048608,GO:0048609,GO:0048646,GO:0048731,GO:0048806,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051276,GO:0051301,GO:0051382,GO:0051383,GO:0051704,GO:0051716,GO:0051726,GO:0055123,GO:0060255,GO:0060429,GO:0061458,GO:0061640,GO:0061641,GO:0065003,GO:0065004,GO:0065007,GO:0070013,GO:0070176,GO:0070210,GO:0070316,GO:0070317,GO:0070370,GO:0070603,GO:0070822,GO:0070925,GO:0071103,GO:0071704,GO:0071824,GO:0071840,GO:0071897,GO:0080090,GO:0090304,GO:0090545,GO:0090568,GO:0090571,GO:0090598,GO:0097159,GO:0097659,GO:0098654,GO:0098687,GO:0098732,GO:0098813,GO:0140014,GO:0140096,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901576,GO:1902494,GO:1902679,GO:1903047,GO:1903506,GO:1903507,GO:1904949,GO:1990234,GO:1990483,GO:1990837,GO:2000112,GO:2000113,GO:2001141 |
| Exons | 8 |
| Evalue | 4.63e-186 |
| EggNOG OGs | KOG0264@1|root,KOG0264@2759|Eukaryota |
| Ec32 ortholog description | Nurf-55 |
| Ec32 ortholog | Ec-21_004560.1 |
| Description | chromatin organization |
| Cds size | 1530 |
| COG category | K |
| BRITE | ko00000,ko00001,ko03036 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680789522.3194473-UTR-P-littoralis_Contig121:387517..389152 | 1680789522.3194473-UTR-P-littoralis_Contig121:387517..389152 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig121 387518..389152 - |
| 1680789522.4243104-UTR-P-littoralis_Contig121:399337..399404 | 1680789522.4243104-UTR-P-littoralis_Contig121:399337..399404 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig121 399338..399404 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680789522.3348544-CDS-P-littoralis_Contig121:389152..389297 | 1680789522.3348544-CDS-P-littoralis_Contig121:389152..389297 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig121 389153..389297 - |
| 1680789522.3508773-CDS-P-littoralis_Contig121:390054..390239 | 1680789522.3508773-CDS-P-littoralis_Contig121:390054..390239 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig121 390055..390239 - |
| 1680789522.3592103-CDS-P-littoralis_Contig121:391091..391253 | 1680789522.3592103-CDS-P-littoralis_Contig121:391091..391253 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig121 391092..391253 - |
| 1680789522.36788-CDS-P-littoralis_Contig121:391781..391921 | 1680789522.36788-CDS-P-littoralis_Contig121:391781..391921 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig121 391782..391921 - |
| 1680789522.3798862-CDS-P-littoralis_Contig121:392730..392894 | 1680789522.3798862-CDS-P-littoralis_Contig121:392730..392894 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig121 392731..392894 - |
| 1680789522.390737-CDS-P-littoralis_Contig121:394026..394181 | 1680789522.390737-CDS-P-littoralis_Contig121:394026..394181 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig121 394027..394181 - |
| 1680789522.4050767-CDS-P-littoralis_Contig121:394825..395039 | 1680789522.4050767-CDS-P-littoralis_Contig121:394825..395039 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig121 394826..395039 - |
| 1680789522.4146612-CDS-P-littoralis_Contig121:398972..399337 | 1680789522.4146612-CDS-P-littoralis_Contig121:398972..399337 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig121 398973..399337 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig121.95.1 >prot_P-littoralis_Contig121.95.1 ID=prot_P-littoralis_Contig121.95.1|Name=mRNA_P-littoralis_Contig121.95.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=510bp
MSSEGGGTVSGDSSAAGAPPLTVVSSSAVAESSSNGAAATASAAASEAAP AGDKAPSEAAPAAPAPAPAPPQQLADHNNGNDVSAANEEAEERMITEEYK VWKKNTPFLYDVVMTHALEWPSLTVQWLPSVKSQESKDYAVHKLVLGTHT SGSEQNYLMVANVNLPVPGAEIDNRTYDDEKGEMGGFGGVHGKVEVTVKI NHDGEVNRARYMPQNEFVIATKSPSADVCVFDISKHPSVPPSNGGCRPEH RCKGHTKEGYGLSWNPHVEGRLLSGSDDGLVCYWDLKGAGQTVEATQKFE GHTSVVGDVAWHQQNPKLFGSVGDDKQLLFWDTSMDGSKPTTVIPNAHSA NINCLAFNPFNEFLLATGSSDTTVALWDMRNMAKPMHLLERHSSEGGDGE VLGVQWASFDETILGSCSADRRVKVWSLSRIGEEQSPEDAEDGPPELLFI HGGHTSRVGDFSWNTNDDWVCASVSEDNILQVWQMAENIYAEEAEVEDPE EVEDQDLED* back to topmRNA from alignment at P-littoralis_Contig121:387518..399404- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig121.95.1 ID=mRNA_P-littoralis_Contig121.95.1|Name=mRNA_P-littoralis_Contig121.95.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=11887bp|location=Sequence derived from alignment at P-littoralis_Contig121:387518..399404- (Pylaiella littoralis U1_48) GCGGCACCACAGCAACAAGAGTCCCTAGCTTTCGCTCTCGGCCACCCCCA
CACCAATAACGTGCACGATGTCATCTGAAGGAGGAGGAACAGTGTCAGGT
GATTCCAGTGCGGCTGGTGCACCACCATTAACGGTGGTATCCTCTTCTGC
TGTGGCGGAGAGCAGCAGCAATGGCGCAGCTGCGACAGCTTCGGCGGCCG
CTTCAGAGGCGGCACCCGCAGGTGACAAGGCTCCTTCAGAGGCAGCACCA
GCAGCTCCAGCTCCAGCGCCAGCGCCTCCGCAGCAGCTAGCTGACCACAA
CAATGGAAATGATGTTAGCGCTGCCAACGAGGAGGCAGAGGAGAGGATGA
TAACGGAGGAATACAAGGTGTGGAAGAAGAACACGCCCTTCTTATACGAC
GTGGTCATGACCCACGCGCTGGAGTGGCCAAGGTGTGTTGGGGGGTAGGG
TTAGGTCCTGTTTTCAAGACAGAAAACTAACTGCTGCTGCCTGTTTGAGG
CAATTGATTTCAACCCGAGGGTAGGTAGACACGAGCGCCAAAGGGCGATG
AACGGACTTTGGAAGGGACAGGGGGTGGCGACGCTTCGGCGTCAGCGCTT
TTATGTGTGGTCGATACAGCTATCCCCCCAAGAGAGAGAGAGAGGTGGGG
ACAGGCATCTCCCGGCCGCTGTCGCACATCACGGACAGATCACACAGCAC
ACACATTCGAATTCAAAATCAGACGAAAGGAGCTCGAACCCACTCCTCGG
ATACTGCTGTATTGCTTGCACTACGTCTCTACATCGGACTTCCTGTAGAA
AAGCAAAACGAGTACGTAGCGCCTCAGACGCTAGATCAGTCCCCACACCT
CACACACATCTTTGGACCTTTTCTCGAAACTCGATTGCCTCTCACGAGCA
AGCCAGTGTCGATGCTCAAGAGAGTGGGCGTTGAAATCATGGAACCATCC
CTTCGAGGGCTTTCAAAAACCTGTATTCAGAGGTATGATACTATGATACA
TTTACATACTCTCGAAAGTTGTAGGTGTAACTTTCACGTATCATACTCCC
TGTTACAGCAGACGGGAGTTCCTGTACAGCAGTACTCAGTACTTGTGCAA
GTACGAGTAGAGTGATGTGATCGACATCGTTTGATGTTGGCACTCTCTTC
TCGTGATAGAAACTTCGTACATACATACCGATATATTTCTGTGTTCCTTG
CTAATCTGCTCCAGATCCTTCTTCGGAGAGAGGCGGACACATTATTCTGA
TACAGCAGCAGTATGTGTGTGAGAAATGAATGTGTGTGTGCAGGAAAAGT
AAAAAATACTACAGCAAGGTGGGGGCTACGGTTTAAGGCCACACTGCTGT
TGTGTTCAGTACTTCGAAGTCTATAAAATAAAAAAAGGGTTGTGTAGAGG
AGTGGCATTTTGCAACAGAGAACCAAATGACTTGAACATAGTGTTAAGGA
TTAGGATTTGCAGAAATGCAACTTTATGTGGAAGGGGTTCAAATCATACC
CGAAATATCGTCTTTTTAGCAGCTTTTTGGGCCGTAGATTGAGTTTAGGA
ATTGTGCCCAACCAAAAACCTCTGTAGGTCGGTGCCTTAGAAGATCGCCC
GGTAAGCCAGCTAAATTCGCGTCCGATTCGTTTGTTGATCGGGGGTACAC
ACGCGGAGAACGGTGGCATCGTGCAAACGCACCCGCAGATCCCATTTTGG
TGTATTTTCGGACTGCTTCAGGCATCAAGATACAGTACAGCAGGTACAAC
ACGAATACTTCTAGAAGGGTTTCTGGCTGCCTGCTGCTGCTGTCAAGGCA
TAGGACGCCACTCACACACCACATCAGACACCACATCAGTAGGCTGTGAC
AATTTGAAACAGTGTGGTGGCTGTGGCGAGCTTGCTCTGTCCGTAGCTGA
AGCACATTTTCTGCCTTGTTTAGCGCAAATAAACCATGCGGCGAGATGGT
CCTCAAAGGATTCATTTTGAGCACCTCGATCTCGCGATACAAGGCATTTA
CAGAGGTTGGGCACAATTCTAACCCACACGGGAGTTGAAGCTGCTGCGAG
ATCTCTTAAACCCTACAGAGGTCTGTGCCTCCAAAGCTGAATTGCGGAGG
GTGGGTATGGAGCGTACAGCAGCAGTCAGGGGGGGCACCGACCAGGATTT
TTATCTAGAAGTTTAAGACGCGGGGAAACAAATTATACTGTGGAGCCAAA
AACACCACCACGGGGTCCAAGGGGATGATGCCCAGCGTCCCCATCAGTGT
TGCCTTAAGAGAGGGGAGTGCCAAGCTATATATGTTGCTCTCTCTTAAAC
CCGACCTTCTCTACCGGTTTGGTTTCTCTTAAACCGAGCTCTTTAACCGA
ATGTACGGGTTTTCTCTTAAAGAACCCTATCTAGGTCCTTTCTATTGCAT
GTACCCCTTTATTTCCTCATTTTTCCCTCAGTATGTGTGTGTGTTGTCGT
CCCTTTAATTGGACGCCACTCTACACCTTTCGGGTAGGTCGACGCTCCAA
CTGGGGTCACACAGGGGGAAGTCAACACAGGAGTTTTTTTTTTCTCCACT
TCTCTCTGCGGTGCTTGCCTTGTTTTGGTTGAGCTTTTATCGCGAGAAAG
GGGACAGCAATCCCTTTCCCTCGTCGATGGTACGATCGAATTTTGTTTAC
TCACGAATTAATCGCTTTCCACTTTCACGGGCATTGTGAGAAGCAAACCC
AGATCGTGTTACTGCACTGGGATTCGAACTCACGCGTGAATGTCAGAAGG
TTACGTGGATTATCAACTGCACCACCGGGGCGACCGGTGTAGTATACACG
GCAGAAGAAATGTGCTGTACACCAGTCCACTTCTACTTCGTACTTCGAAG
TACTACGTTAGGTTTTCGACTGGGCTACAAGGGGGACTCGGTTTAAGAGA
ATTGGCGTTCGGTTCAAGAAGTGTGGTGCCAAGCCATTTTAACCTCTCTC
AAACCGGCAATTCTCTTAAACTCAGCTCTCTCAAACCGTTGCCATGACTG
CACAGAAAAGCTGCCCTTCGCGTTCGTCGATAACGGACACTTGCCAACTT
TTCGAACTTGGTCACATACCAGTAATTACACTGGATCTCAGTGTGTGAGA
GAGACGAACACACTTGTCATGCGTCTTTTCAAGAAAAATAGAGAGAAAGA
CGTCAAAATAGTCGTATATCTGTCTCCAGACGAGGGTTTAAGGGAGATTA
GCAACGAACACAATGTGAAATGCAAATACTGCGTGGTGCGGTGTTGTTTA
CATGCCTTTGTATCGTATGTGTTTGTGTGTGCCTGTCTTTCTTTTTCCTT
GCAGAGACATCACTAAAGGCGTCCCTCTTTAGACGAGGATTTATCGTAGC
GTAGATAGGCAACGAACACAATGTTTAACAAATCCATCTCAGACTATCGT
GTGTTTCTAAAACCCGTCAGATAATGTACGGCAGTCGCGGCTAACCTTAG
GTAATCGCGCTCAACAAGACGATTGGGAGGTCGTCTTGGCTACGATACAT
CGTGTGCGCGTGGTGAAGCATCATATGTATGAACGTATCTACGGTCGACG
TGGGTCCGCTGTCGGCATATCATACTGTGAACTGGGGTTGAAATTTTGTC
TTTTTCGTCCTTTTGTATCATTTCACGTACCCGGTACTGCTGGAATTCTT
TTTGCTGTTGTGTGACTCAACAGAGCTATCCAGGGGAGTTTTAGTACCAC
AAACTTCTCCAGGTTATTTATCGTACAGCACAGGTGTTTCGGTCTCGGCT
GGAATGTACAGGCCGGAACCTCCTCTTTACTGAAGGGAGTTCGAATTATC
TACATATCCCTTGAAGTTTTCTTCGCGAGGGGGCGCAGCGGGGGTGTCCT
TGTTGGATGTTGCATATGTTTTGTCAAGAAACGTTAGATGGCTCACTTTT
TGATATCTGCTGTTGCCATGTCCCTGGACCAGCTCTTACCTGGTCCCTGC
TGGGCCTCTGTACTCTCGGTGTACCTACTCGTAGCCGACCCGGTGTATCC
AGATTTTTACCACCCATCGCCGGACACATAAGAACAAAAAAAACATCCTT
TTCGAGTTGTCCCGTTACCCGTCGCGTGAGAAACTTTCACACCCCGGCGA
TGAATATCGCCCCCCCCCCCTTTCCCAAAAAATATTCCTTCCAGGTGATT
CAAGCAACTTATTTTGTATTTTGCGCACGGGACAACTATACGAGGGGTGA
CCGCACAGCAGTAGTTCCCGCTTCCTGCCCCCCCTCCCCCACCCCCTTGT
AGTGTACCAGGTACATGACATTCCACACCGACGAGTGTACGCGATACGCT
GTCTTCCTGACCCCCTCCCCCCCCCTTCCCTGCCCTTTCCCCCGCGCCGC
ACTCCCTGTGCACAGCCTGACAGTCCAGTGGTTGCCTTCCGTTAAGTCTC
AGGAGAGCAAGGACTACGCGGTGCACAAGCTGGTCCTGGGCACGCACACG
TCGGGCTCGGAGCAAAACTACCTCATGGTGGCCAACGTTAACTTGCCGGT
ACCCGGAGCGGAGATCGACAACCGTACTTACGACGACGAGAAGGGGGAGA
TGGGCGGCTTCGGCGGGGTCCACGGAAAGGTCAGCGAGATCATCAGCGGG
ATAAAGTTTTGGTGTTGGTGTTGGTGTTGGTGCTTGTGCTGGTGCTGGTG
TTTGTGGTGGTGGTGCTATCGTATTGTTTTTGCTTTTTTCATTGTTGTTG
TTGTTGATGGTGTTGATGTCGGTGGTACTTTTGTTTTGTTTTTTGGTTGA
GTTGTTGCATCAGCAGCAGCAGCAGCAGCAGCAGTGCTGCAGCTTTTAGT
GCCACATCTAATTGTTTTGGTTTAAAACGGCCGTCAGTGTGTGCACGCTC
CGATGTTTGAAAAGAACGGACACGATTTTCACGAGCAGGTGCCTGTCCAA
TGGTGAACCCCAGGGGGGAGGCAACCGAATGCGTGTGGGTACAGTTTGGA
GGTTTGGCTGCTTGTACATGCCCCGTGGGACAGGAATACATTAAAATACT
GGTTTAGGGTGGTACTTCGAAGTATTTCTTTGTGCTTTACTGCTGCCGCA
CCAGCACCTGCAGCACCACAGCACCAAGCAACAGGGGCACCTATCATAGA
CAGCAGCAATAAGGTTCTATTTTGTTTTGTTCTGTTCCCCCCCCCAACGT
CCTGAAACTGGCTTGTCTTCCTTGCCCTCTAACTCCCTCCCTCCCTCTCT
CCCTCCCTCCCCTCCCATTGCAGGTGGAGGTGACTGTGAAGATCAACCAC
GACGGGGAGGTGAACCGCGCGCGCTACATGCCGCAAAACGAGTTCGTGAT
CGCCACCAAGTCTCCCTCTGCCGACGTGTGCGTCTTCGACATCTCCAAAC
ACCCCAGCGTTCCCCCCTCCAACGGCGGGTGAGGAGGCAAAGCAACGAAC
GAAATGTATACTGTTTATCATATACTTCGAAGTATCATATGGATGTGACA
TGTGTGTGTGTGCTATCACAGCAGTAGCGTACAGCAGTACTCGCTGTACA
TGCACCCTCACAAGCGCCGCCGGCACAGAACGTCGGCTCGTTTCCTAAAG
GAGCGAAAATGAAACTACTGCAGTTATGGTGAAGGGTACGTTTTTTTTGC
AGCAGGGCTGAACTGAAAGGCGGCGTTTACACCAAGAGGAGACGCACGCT
CCGGGATACGGAACGCAGCCAGATCGTCTCGGCTAAAAATGAGCTGTTCC
GGTTCCCTGTGATGTTTGTCTTCGGACCGGCGTCGTGGAAAGGAGCAGCG
TGAGCTTGCTCGCCTGCGCCCGCTCCGCCTCCTCGCAACGAACGGTGGCG
GAGTCACGACAACATAACCTTCGAAGTTTTAACTTTTCCACGCTTCGGAG
AGAGAGTAACTGTTAAAGGAGTCACCGACAACATAAACTTCGGAGCTTTC
CACACTTCGGAGAGGGGAAAATCGTCGAAGGAGCGGGCAGCTGGTAGGGG
GGGGGGGGGGTGCAGAGGCCAAACTACGCATGAATACGCGTTGAGTGAGA
GAAACGAAACGGGAGGAGGGAGGGAACGAGGGGCACAGTGACTGGTACAG
AGATAATGAAGAGGGGGGGAGGGGGGGGGGGTACGAAATGCAAGCCGACC
TCTATAGACGTCCGTCAAACCGTAATCCTTGTAAATCTCGTGTGTGAACA
ACTTCCTTGTGTGTGACACATTTGAGATCAGAACACACACACACCAAAGG
CCACGTACGGTCCTTTGTTGGACCCCGAGCCGGAAGGGGCGCAAGATGAT
GCCGCTCACTTGCCCGTTACCATCTCGCCCCCTGACCTCGCGGTCATGTA
CGACACACACCTGTCGCGGGCACCAACACACACTCGCACCCACAGGTATT
GCCACTCAATGTGCGCCAAGTATAAGATATGTAGCATATTCTACTGTGTT
GGTCGGAGACGGGGGGGCTAAAAAACGAGTCGAACTGAAAAAACCTACCG
GCAACAAGAAAAAAATAGTACCGCACGCACGTACTGCTGTATCGTAATAT
TATATGATAGGTGCCGACCAGAGCACCGGTGCAAGGGGCACACCAAGGAG
GGCTACGGCCTCAGCTGGAACCCACACGTAGAGGGTCGGCTGCTGTCCGG
GAGCGACGACGGCCTGGTGTGCTACTGGGACCTCAAGGGGGCGGGCCAGA
CCGTAGAGGCGACGCAAAAATTTGGTGAGAGCAGGAGAATGCTTAGTTTT
TTGGTATTTGTTTACATACATTGTATGATGTGGGCCTCCAAAGAGATTTA
TAAACTTTTTTTTGTCAAGTGTTATGATAGCCCGGCATCTTCCAGAGGGT
GGCGTAGAGGCCAACAGAGAGAGAGAGAGAGAGAGAGACGTGCGCTGGCG
TAGCTAAAAGAGAGACGGAATGAACACGCAAGAAATAGAAAACAAAAAAC
TTCCGGACTGCTTTTTTTTTTTTTCCACAGTTTTTGTTTTAGTTTTGTTT
CCTCGTTTTTTTGCCGTCCTGTTCGACACGCCTGTCATACCCAATGTCAA
AGAGTGCCGTGTTCAAGATGTTCATGACATGCACAGAATTCGCCAGGTGA
AGCTGAAACGGGTGGGGGATTGGGAATAGAAAGGATATTTGATGTCTAAG
GGCGCGGGTGGAGCGGGGGCGTATGGTGGAATTTCTCGGTGACGGCAGGC
TGTTGTGCCATATCCACGGCCACTTGTGAATGGCGTGTGTGTGTTTGTGT
ACCAGGTATTTCTTTGGGGGGGGGGGGTGCTATGCGCGCCGTAGTTCCGT
TCTCTTCCGTCGCCGCACCGGGAGTTTCTTCCCACGAACATAAAAAAACA
AGCAGTGCATTTTTCTGACCTCCCTCCACTAACCCCCTCCCCTCCCCTCC
GGCTTCCGCTCCCGCTCCTGCTCCTGCTCTCCCTCAATCGCATCGCCATG
TGACCCGCCCTACCATACGCACCTCTGATATTAATCGAATGCCTCACGTG
TACGGACGGCACCAAACACGAACAACAACACAGAGGGTCACACTTCTGTG
GTTGGGGACGTGGCATGGCACCAGCAAAACCCGAAGCTTTTCGGTTCTGT
CGGCGACGATAAGCAGCTCCTCTTCTGGGATACGTCTATGGACGGGTCCA
AGCCGACGACGGTCATCCCGAACGTGAGAAGCGGGGATTTTTTTACTTTT
TTTTTGGGGGGGGGGGGGGCGAGTGCGGCACTCATCCTTGACGAATCGAA
ACAAAACGCAAGTCTCCTGGTCCTTCCGATAATTATCGCGGTAATGTGTC
CTACAAGTATCGTACCGAATTTTTGTTAGTGTGAAATGACGCCAACCTCA
AGCATCAGTCACTCAGACAGTAGTGAAGCAGAAATCGTTTTGACTGCGTC
TACCGCAGAAGCAAGCAGGAGGAAAAGAAAAAGAAAAAGAAAAAACGCCG
GCGTTGATCCCTTGTTGCTGTCTGTGTGACCCCCCGGTGGTGCGCCCAAT
TTATACCGAAAGGTGTAGGCTGGCGTCCAAAATACATGGGGTGTCAACAC
ACACAACACACAAGTACAGTCCGACCAATCAAATTACTTGTCTGTATTTA
GCGATTGTGTTTCCGTGCTGGACACGCAGCGACTGCAAGCCTTCGGCGAA
AAAAATGACCGCACCATGCTATACCATACACACACGACAAACGAACGACA
GGCGCACTCGGCGAACATCAACTGCTTGGCGTTCAACCCGTTCAACGAGT
TCCTGTTGGCTACGGGATCGTCGGACACGACCGTTGCGCTGTGGGATATG
CGCAACATGGCGAAGCCGATGCACCTGCTGGAGAGGCACAGCAGCGAGGG
GGGTGACGGAGAGGTATGCTGTTGCTGTCGCTATTGCTATTGCTGTTGTT
GTTGCTGTTGCTGTTGTTGTTGCTGTTGCTGTTGTTGCTGCTATTGCTGT
TGTTGCTGTTGCTGTTGCTGTTGTTCTTGCTGTTGTTCTTGTTCTTGTTC
TTGTTCTTGTTCTTGTTCTTGTCCTTGTTCTTGTTCTTGTTCATGTTCTT
GTTCATCTTGTTGTTGTTCATGTTCATGTTCTTGTTCTTGTTCTTGTTCA
TGTTGTTGTTGTTGTTGTTCATGTACCTGTTCTTGTTCTTGTCGTTGTTG
TCGTTGTTGGTGGTGGTGGTGGTAATGTTTCTCACACCAGCCTATCGCGA
ACATGAAGCCTGTGGTCGCGAAATACCGAGAGGCACACATGAAAAGGGAA
AAAACAGAGTATCGTATCATACACCCGGAATAAAAAACACAACACCAGTC
GTGTTTGGAGCATACAGGTGGCATATACTTCGTATCATATACCTGGAACA
TTCACAGCCCCACGTATTCAAAGCATGTTAAAACAAGTCGTGAGTCATGT
ACTGTATCAAAGCCCACCAACGCGCTGGAGGGAATGGTTGTTGCTTCTTC
TCGTGTGGTTCGCCTCGCGGCTTCGCCGTGTATCTGTCACCGGGACTCGA
CGTTTGTACTATTCCACTCAAAGGGTAGCCACGCGGAATGAATGATGACG
AAGGAGCACCCCCCCGCCCCTCCCACCTTTTCCCCTTCCCGTCCAAATGT
GTAGCCGATGAGGAATCCGTGGGCGTCGTTAGTAATACGTTACTGTAAGG
TTTTGCTCTCAAATGATACTGAACCCCCCCCTCCCCTTTCCTTCTTTAAC
CCCCAACATGTTAAGGTGTTGGGAGTCCAGTGGGCATCGTTCGACGAGAC
GATCCTCGGATCGTGCAGCGCGGACCGAAGGGTCAAGGTGTGGAGCCTCA
GCCGGATAGGGGAGGAGCAGAGCCCCGAGGACGCTGAGGACGGTCCGCCG
GAGCTGCTGTTCATCCACGGCGGCCACACCAGCCGAGTGGGAGACTTCAG
GTGCGCCTCGCCCCCCGCCCCCGCCCCTGCTCCTGCCCCCCACCTCCGCC
CCCAACCCCCGCTCCCTGGTGTTGTTGTGGAATCGGCTTGCGGTTTCTTG
AGGAAGAAGTAGCAGTAGCAGCAGCAACAGGAGGACGCAGCAGCAAAGCA
GTAGCCACCCCCGCGATTGACGGTGTTTGCTATCATACCCGTCGAACAGC
AGCAGAGAGTCAAAAACAAACGTCTCTGGATTTTTCACGAATGGTGTATG
TACACCAAAGGTGTTTCGTTCTGTTTGTGTTAGACTTTTGTGATGATTCT
TTTTTTTTGTCCATGCTGTATGATAGCATGCCTTGCTCCTCTCCCCCGCG
TTGTCACGTCCCAAGCTCTGGCGTTTTCGTCAATCGAATTTGCACACAGT
AACGCTTTCTTTTTAACGTAGTTCACGGTGCGTCTTTTTTTTTGGAGGAA
ACAAGGAAACCCAACTCCTCTTCCAGGCCAGCTAGAGGGTTCGTTGCTTG
TTTGTTGCGCGCATCGAGCCCATGAACCCTCCCCTCCTAGCTCCATCACG
AAAGGGAGGCGTGGTCAGTGGCCGAATGATAAAGGCACGCAACAAGATAC
CCCCCCCCCTCCACCCGCTGTTTGGTTAGTGCACACGGCGGTGTCAGACG
AGGATAACATCCTGACCCCCTCCTTTGCTCCCTCCCCTTACCCCCTCTAC
CCACTCCGTTGGAAATTCGATCTCCGCACCGCATATGCTTCGTACACATC
ACATCAGCTGGAACACGAACGACGACTGGGTTTGCGCGTCGGTCTCGGAG
GACAACATCCTGCAGGTGTGGCAGATGGCGGAAAACATCTACGCGGAGGA
GGCGGAAGTCGAGGACCCGGAAGAAGTGGAAGACCAGGATCTCGAGGACT
AGACTTACCTCAACTAAACGAAAATGTTTTTTTATCAAAATTTTTGCCAG
CTAGTCAGTTCCGTTTTTTTTGTTTTTTTTATCGAGAGTCTCAAAGAAGA
AGCCACTCAGCGCGTGTTTCTTTGTCGTGTATGGTGTAGTGACGGGACGT
GCGGGAGAGGCGGGCCGACGTCTGTAACCACGGGTTCCAGAGGTCGGGCG
TACGTGCGGAAAGCCGGTACTAATAACTGCTCCGTCTAAAGATACCATTT
GCTGTACCTGTCCAATTTTTTTCTTCGTGTGATGCCGGATCATATTAAGG
CCACCTCTGTTTACAGAGCCGCGGCACAGCAGTGTGAAAGACATCAAGCA
CCCGCAATGTTCCCGTATTTTGGTCATTTTTTTCTTGGCCGTCTGTTTTT
GACGGGGGCGGGGAAATCATTGCAGCATTTTGACTGCTGTCAATCTAAAA
TATCCATCCGCAAGATGGACGTTCCGATGCGTTTATTTTTTTACTCTACG
AGTATGTATCGAGCCGCTTGTTGTTGGTGTTGCACCTGATGAGAAAGGAC
AGAGGGCAGCATAATTTCATGTACGTAGTAGGAGGGTAGCACACGACCCA
CGAGGGCGGTACGATTGGGGGACACGGTCGGTAGAGGGGGAAGTCAAATC
ATGAAGTGTCCGTGTGTGCCATGCTGGTTTGATGCGGGTGCGAAGGCGGC
GGATGATTTGAATTCCTGCGCTTTCATTCTGCCGAAGTTGAGATTTTCAT
GGACAAACATGGCGGCACAGCAGCGCTGCCCGATGCACACAGCAAACGCT
CCTTGTTCCCTGCGTCTCATCAATGGTGTGCATGTTGGGGTCATGTAGGT
CGCATCGTCATTGGAAACCTGGACGATGGTGTACCCAAAGCGTATATGCC
TACAGCGGCAAAACTTCTGTCTTCTCTCTGCCTGTCCTTGTTTATTTTAG
TCAATTTTTGAGACGTTGAACAGTAGCATGGTACTACTGCACCGCCTGAA
GTTTGATTCAATGTTCCTCGTCATTTAGCGCGCGCGTTGGTTGCACTGGC
CTCGAGTGAAGAGTCAGGTGATTCGAGTTTTGGTTTGTACTTGTTGAACA
ACAATAATGCAGCTGTTGTATTTTACAGGCAGAGTGCGATGGATTGTTGG
CGTTCATTCATAGACCCTTAAACCTCTGTGGATCCCAACCCCGTGTCGAT
TTCTGGAATGTCAGCATTCCAACCTCTACTACTCTGTTCCACTGATGTAC
GCAAGTGTGTAGATGTGTGCTGGAAGTATCATGACGCAAAGAAAGCAAAG
ATGGATGTCCAAATAAGTATTGCGCGCGGGTTGCCGCCCCGCACAGGTGG
GAACGCGGAGAACTGTTGTTCCGATCTTCGTGAAATAAATTACTTTCTTG
TATCTTGTTCTATTTTTGTACAGCGTTGTGTGATTTCTCGGGGTCCGTTT
TTGTTTTTTGCCGGAGCCTCCTTGTCGTGCCTTTGTTTGGTGGACTGAGG
GGATCTCCCGAGTACTTTATACCTCTTCTGGGGCAAGCAGCCTGTGACCA
CGGAAATCGTACCTGATCGGTGGAGTACGGACATTAGAAGATACTGAGGA
GAGATCGGAATGGTTTTTAATGTGAAGACAACAACAA back to topCoding sequence (CDS) from alignment at P-littoralis_Contig121:387518..399404- >mRNA_P-littoralis_Contig121.95.1 ID=mRNA_P-littoralis_Contig121.95.1|Name=mRNA_P-littoralis_Contig121.95.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1530bp|location=Sequence derived from alignment at P-littoralis_Contig121:387518..399404- (Pylaiella littoralis U1_48) ATGTCATCTGAAGGAGGAGGAACAGTGTCAGGTGATTCCAGTGCGGCTGG TGCACCACCATTAACGGTGGTATCCTCTTCTGCTGTGGCGGAGAGCAGCA GCAATGGCGCAGCTGCGACAGCTTCGGCGGCCGCTTCAGAGGCGGCACCC GCAGGTGACAAGGCTCCTTCAGAGGCAGCACCAGCAGCTCCAGCTCCAGC GCCAGCGCCTCCGCAGCAGCTAGCTGACCACAACAATGGAAATGATGTTA GCGCTGCCAACGAGGAGGCAGAGGAGAGGATGATAACGGAGGAATACAAG GTGTGGAAGAAGAACACGCCCTTCTTATACGACGTGGTCATGACCCACGC GCTGGAGTGGCCAAGCCTGACAGTCCAGTGGTTGCCTTCCGTTAAGTCTC AGGAGAGCAAGGACTACGCGGTGCACAAGCTGGTCCTGGGCACGCACACG TCGGGCTCGGAGCAAAACTACCTCATGGTGGCCAACGTTAACTTGCCGGT ACCCGGAGCGGAGATCGACAACCGTACTTACGACGACGAGAAGGGGGAGA TGGGCGGCTTCGGCGGGGTCCACGGAAAGGTGGAGGTGACTGTGAAGATC AACCACGACGGGGAGGTGAACCGCGCGCGCTACATGCCGCAAAACGAGTT CGTGATCGCCACCAAGTCTCCCTCTGCCGACGTGTGCGTCTTCGACATCT CCAAACACCCCAGCGTTCCCCCCTCCAACGGCGGGTGCCGACCAGAGCAC CGGTGCAAGGGGCACACCAAGGAGGGCTACGGCCTCAGCTGGAACCCACA CGTAGAGGGTCGGCTGCTGTCCGGGAGCGACGACGGCCTGGTGTGCTACT GGGACCTCAAGGGGGCGGGCCAGACCGTAGAGGCGACGCAAAAATTTGAG GGTCACACTTCTGTGGTTGGGGACGTGGCATGGCACCAGCAAAACCCGAA GCTTTTCGGTTCTGTCGGCGACGATAAGCAGCTCCTCTTCTGGGATACGT CTATGGACGGGTCCAAGCCGACGACGGTCATCCCGAACGCGCACTCGGCG AACATCAACTGCTTGGCGTTCAACCCGTTCAACGAGTTCCTGTTGGCTAC GGGATCGTCGGACACGACCGTTGCGCTGTGGGATATGCGCAACATGGCGA AGCCGATGCACCTGCTGGAGAGGCACAGCAGCGAGGGGGGTGACGGAGAG GTGTTGGGAGTCCAGTGGGCATCGTTCGACGAGACGATCCTCGGATCGTG CAGCGCGGACCGAAGGGTCAAGGTGTGGAGCCTCAGCCGGATAGGGGAGG AGCAGAGCCCCGAGGACGCTGAGGACGGTCCGCCGGAGCTGCTGTTCATC CACGGCGGCCACACCAGCCGAGTGGGAGACTTCAGCTGGAACACGAACGA CGACTGGGTTTGCGCGTCGGTCTCGGAGGACAACATCCTGCAGGTGTGGC AGATGGCGGAAAACATCTACGCGGAGGAGGCGGAAGTCGAGGACCCGGAA GAAGTGGAAGACCAGGATCTCGAGGACTAG back to top
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