mRNA_P-littoralis_Contig121.59.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig121.59.1 vs. uniprot
Match: D8LEJ6_ECTSI (p28, 28 kDa light chain of axonemal inner dynein arms n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEJ6_ECTSI) HSP 1 Score: 412 bits (1060), Expect = 9.800e-144 Identity = 229/261 (87.74%), Postives = 232/261 (88.89%), Query Frame = 1
Query: 1 QQGMQFPMEVPPTLVKFDPPIFAGLEPSSDANKNRNGNSTHXXXXXXXXXXXXXXXXXXXXXXRQGKTSQLDDMVNSMLPPREWTEETGTWMQYVSKEPATRLAVITLQEQLDKKLLERQALETGICPVREDLYTQAFDELIRHVTLDGPERGLLCLRVRDEIRMTIDAYKTLYDSSVTFGVKKQLQAEQGMAEMEEQIAGLEENKKELELHVSELRNKVEVIEKGESERRTVDDKKRKEEVDFLKYQGQHLDSFLKQIGG 783
QQGMQFPMEVP TLVKFDPPIFAGLEPSSD N NG + XXXXXXXX +QGK SQLDDMVNSMLPPREWTEETGTWMQYVSKEPATRLAVI LQEQLD KLLERQALETGICPVREDLYTQAFDELIRHVTLDGPERGLLCLRVRDEIRMTIDAYKTLYDSSVTFGVKKQLQAEQGMAEMEEQIA L E+KK LELHVSELRNKVEVIEKGESERR VDDKKRKEEVDFLKYQGQHLDSFLKQIGG
Sbjct: 13 QQGMQFPMEVPQTLVKFDPPIFAGLEPSSDPN---NGGD-NALLMGGNGGXXXXXXXXMGGKGQQGKASQLDDMVNSMLPPREWTEETGTWMQYVSKEPATRLAVIALQEQLDNKLLERQALETGICPVREDLYTQAFDELIRHVTLDGPERGLLCLRVRDEIRMTIDAYKTLYDSSVTFGVKKQLQAEQGMAEMEEQIAALGEDKKGLELHVSELRNKVEVIEKGESERRAVDDKKRKEEVDFLKYQGQHLDSFLKQIGG 269
BLAST of mRNA_P-littoralis_Contig121.59.1 vs. uniprot
Match: A0A7S2CCB2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CCB2_9STRA) HSP 1 Score: 318 bits (815), Expect = 5.850e-107 Identity = 170/253 (67.19%), Postives = 194/253 (76.68%), Query Frame = 1
Query: 31 PPTLVKFDPPIFAGLEPSS-DANKNRNGNSTHXXXXXXXXXXXXXXXXXXXXXXRQGKTSQLDDMVNSMLPPREWTEETGTWMQYVSKEPATRLAVITLQEQLDKKLLERQALETGICPVREDLYTQAFDELIRHVTLDGPERGLLCLRVRDEIRMTIDAYKTLYDSSVTFGVKKQLQAEQGMAEMEEQIAGLEENKKELELHVSELRNKVEVIEKGESERRTVDDKKRKEEVDFLKYQGQHLDSFLKQIGGG 786
P LVK+DP +F G +P++ D R ++T SQLDDMVNSMLPPREWT+E+GTWMQYVSK+ ATRL VI LQE LDK+LLERQA ETGICPVREDLY+Q FDELIR VTLDGPERGLL LRVRDEI+MTIDAYK LY+SSVTFGV+KQLQAEQGMAE+E +I GLE KKELE V ELRNKVEV EK +ER+T++DKKRKEE+DFLKYQGQHLDSFL+Q+GGG
Sbjct: 12 PDALVKYDPALFVGFDPATNDVKATRKADAT---------------------------PSQLDDMVNSMLPPREWTQESGTWMQYVSKDSATRLDVINLQEMLDKRLLERQARETGICPVREDLYSQCFDELIRQVTLDGPERGLLTLRVRDEIKMTIDAYKILYESSVTFGVRKQLQAEQGMAELESEIEGLEAAKKELENQVLELRNKVEVSEKRGNERKTLEDKKRKEEIDFLKYQGQHLDSFLRQLGGG 237
BLAST of mRNA_P-littoralis_Contig121.59.1 vs. uniprot
Match: A0A835YSJ6_9STRA (p28 protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSJ6_9STRA) HSP 1 Score: 316 bits (809), Expect = 4.610e-106 Identity = 168/257 (65.37%), Postives = 198/257 (77.04%), Query Frame = 1
Query: 13 QFPMEVPPTLVKFDPPIFAGLEPSSDANKNRNGNSTHXXXXXXXXXXXXXXXXXXXXXXRQGKTSQLDDMVNSMLPPREWTEETGTWMQYVSKEPATRLAVITLQEQLDKKLLERQALETGICPVREDLYTQAFDELIRHVTLDGPERGLLCLRVRDEIRMTIDAYKTLYDSSVTFGVKKQLQAEQGMAEMEEQIAGLEENKKELELHVSELRNKVEVIEKGESERRTVDDKKRKEEVDFLKYQGQHLDSFLKQIGG 783
Q P VP +LV++D PIF G+EP++ N +S+ +QL+DM+NSMLPPREWTEETGTWMQ VSK PATRL V+TLQE LDKKL ERQA +TGICPVR+DLY+QAFDELIR VTLDGPERGLL LRVRDEIRMTIDAY+TLYDSSV FG+KKQLQAEQGM EME +IA LEE+K+ LE ELRN+VE++EK E+E+R+V+DK+R+EEV+FLKYQGQHLDSFLKQIGG
Sbjct: 6 QHPNAVPDSLVRYDQPIFGGVEPATGHGGNGTASSS---------------------------IAQLEDMMNSMLPPREWTEETGTWMQCVSKNPATRLDVVTLQECLDKKLGERQARDTGICPVRDDLYSQAFDELIRQVTLDGPERGLLLLRVRDEIRMTIDAYRTLYDSSVVFGIKKQLQAEQGMDEMEAEIAQLEESKQALEYRAQELRNRVELMEKREAEQRSVEDKRRREEVEFLKYQGQHLDSFLKQIGG 235
BLAST of mRNA_P-littoralis_Contig121.59.1 vs. uniprot
Match: A0A7S2UXS2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXS2_9STRA) HSP 1 Score: 308 bits (790), Expect = 5.960e-103 Identity = 166/257 (64.59%), Postives = 190/257 (73.93%), Query Frame = 1
Query: 13 QFPMEVPPTLVKFDPPIFAGLEPSSDANKNRNGNSTHXXXXXXXXXXXXXXXXXXXXXXRQGKTSQLDDMVNSMLPPREWTEETGTWMQYVSKEPATRLAVITLQEQLDKKLLERQALETGICPVREDLYTQAFDELIRHVTLDGPERGLLCLRVRDEIRMTIDAYKTLYDSSVTFGVKKQLQAEQGMAEMEEQIAGLEENKKELELHVSELRNKVEVIEKGESERRTVDDKKRKEEVDFLKYQGQHLDSFLKQIGG 783
Q P P +LVKFD P+F GL+PSS N SQ+DDM+NSM+PPREWT+ +GTWMQY+SKE ATRL VITLQEQLDK+L+ERQA ET ICPVREDLY+Q FDELIRHVTLD PERGLL LRVRDEIRMTIDAYKTLYDSSVTFG+KKQLQAE GM++ME+QIA LE KKE E ELRNK+EVIEK E ERR +++KKRKEE+DFLKYQGQHLD+ +K +GG
Sbjct: 16 QDPANPPESLVKFDEPLFVGLQPSSHTKAAAIANIKADG----------------------ANASQIDDMMNSMIPPREWTDVSGTWMQYISKESATRLDVITLQEQLDKRLVERQARETDICPVREDLYSQCFDELIRHVTLDSPERGLLLLRVRDEIRMTIDAYKTLYDSSVTFGIKKQLQAEMGMSDMEKQIAILELTKKERENKTLELRNKLEVIEKREVERRGLEEKKRKEEIDFLKYQGQHLDTSIKHVGG 250
BLAST of mRNA_P-littoralis_Contig121.59.1 vs. uniprot
Match: A0A6V1KR45_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1KR45_HETAK) HSP 1 Score: 288 bits (738), Expect = 4.250e-95 Identity = 156/259 (60.23%), Postives = 183/259 (70.66%), Query Frame = 1
Query: 7 GMQFPMEVPPTLVKFDPPIFAGLEPSSDANKNRNGNSTHXXXXXXXXXXXXXXXXXXXXXXRQGKTSQLDDMVNSMLPPREWTEETGTWMQYVSKEPATRLAVITLQEQLDKKLLERQALETGICPVREDLYTQAFDELIRHVTLDGPERGLLCLRVRDEIRMTIDAYKTLYDSSVTFGVKKQLQAEQGMAEMEEQIAGLEENKKELELHVSELRNKVEVIEKGESERRTVDDKKRKEEVDFLKYQGQHLDSFLKQIGG 783
G Q P P +L+KFD PIF GL+PS N+N +QLDDM+NSMLPPREWTEE+GTWMQY+SKEPATRL VITLQE LDK L+ERQA ETGICPVREDLY+QAFDELIRHVTLD PERGLL LR RDE+RMT+DAYKTLY SSVTFGVKKQLQAE GM+EM QI L E ++ E +ELR +++ EK +ER+ ++ + R+ E+DFLKYQGQHLD FLK +GG
Sbjct: 11 GGQGPANPPESLLKFDEPIFVGLQPS---NQNEGFKMPEAPKGELT-------------------NAQLDDMLNSMLPPREWTEESGTWMQYISKEPATRLDVITLQEHLDKCLVERQARETGICPVREDLYSQAFDELIRHVTLDSPERGLLLLRARDEVRMTVDAYKTLYGSSVTFGVKKQLQAELGMSEMANQIEALGEARRARERRCAELRARLDAAEKRAAERQQLEGQARRAEIDFLKYQGQHLDGFLKHVGG 247
BLAST of mRNA_P-littoralis_Contig121.59.1 vs. uniprot
Match: A0A8J2S909_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S909_9STRA) HSP 1 Score: 282 bits (722), Expect = 6.890e-93 Identity = 151/254 (59.45%), Postives = 177/254 (69.69%), Query Frame = 1
Query: 31 PPTLVKFDPPIFAGLEPSSDANKNRNGNSTHXXXXXXXXXXXXXXXXXXXXXXRQGKTSQLDDMVNSMLPPREWTEETGTWMQYVSKEPATRLAVITLQEQLDKKLLERQALETGICPVREDLYTQAFDELIRHVTLDGPERGLLCLRVRDEIRMTIDAYKTLYDSSVTFGVKKQLQAEQGMAEMEEQIAGLEENKKELELHVSELRNKVEVIEKGESERRTVDDKKRKEEVDFLKYQGQHLDSFLKQIGGGSK 792
P +L+K D P+F G + + A K QL +MVNSMLPPREWTE TGTWMQYVSK PA+R VI +QE LD KLLERQA + GICPVREDLY Q FDELIR +TLDGPERGLL LRVRDE+RMT+DAYK LYDSSVTFGV+KQLQAEQGMAE++ ++A LE K+LE V ELRN VEV+EK SE + + DKKRK+E+DFLKYQGQHLD FL+Q+G +K
Sbjct: 10 PASLLKHDEPLFVGFDGADSAAK-----------------------------PGTAAGGQLGEMVNSMLPPREWTEPTGTWMQYVSKAPASRTDVIAMQEALDAKLLERQARDAGICPVREDLYAQCFDELIRQLTLDGPERGLLLLRVRDEVRMTVDAYKVLYDSSVTFGVRKQLQAEQGMAELQGRVAELEAENKDLENRVLELRNGVEVVEKRASEHKAMADKKRKDEIDFLKYQGQHLDQFLRQLGPAAK 234
BLAST of mRNA_P-littoralis_Contig121.59.1 vs. uniprot
Match: F0Y5N0_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y5N0_AURAN) HSP 1 Score: 280 bits (715), Expect = 1.910e-92 Identity = 140/187 (74.87%), Postives = 165/187 (88.24%), Query Frame = 1
Query: 220 MVNSMLPPREWTEETGTWMQYVSKEPATRLAVITLQEQLDKKLLERQALETGICPVREDLYTQAFDELIRHVTLDGPERGLLCLRVRDEIRMTIDAYKTLYDSSVTFGVKKQLQAEQGMAEMEEQIAGLEENKKELELHVSELRNKVEVIEKGESERRTVDDKKRKEEVDFLKYQGQHLDSFLKQIG 780
MVNSMLPPREWT+ +GTWMQYVSK+ ATR+ VI+LQE LDK+LL+RQA + GICPVREDLY+Q +DELIR +TLDGPERGLL LRVRDEIRMTIDAYK LYDSSVTFG++KQLQAEQGM+E+E +IA LE K+LE V ELRN VEVIEK E+E + V+DKKRK+E+DFLKYQGQHLD+FL+Q+G
Sbjct: 1 MVNSMLPPREWTQTSGTWMQYVSKKTATRMDVISLQEDLDKRLLDRQARDAGICPVREDLYSQCYDELIRQITLDGPERGLLLLRVRDEIRMTIDAYKVLYDSSVTFGIRKQLQAEQGMSELEGRIAELEAENKDLENQVLELRNGVEVIEKRENEHKAVEDKKRKDEIDFLKYQGQHLDAFLRQLG 187
BLAST of mRNA_P-littoralis_Contig121.59.1 vs. uniprot
Match: A0A7S1GAQ8_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GAQ8_9STRA) HSP 1 Score: 269 bits (687), Expect = 1.910e-87 Identity = 139/195 (71.28%), Postives = 164/195 (84.10%), Query Frame = 1
Query: 211 LDDMVNSMLPPREWTEE-TGTWMQYVSKEPATRLAVITLQEQLDKKLLERQALETGICPVREDLYTQAFDELIRHVTLDGPERGLLCLRVRDEIRMTIDAYKTLYDSSVTFGVKKQLQAEQGMAEMEEQIAGLEENKKELELHVSELRNKVEVIEKGESERRTVDDKKRKEEVDFLKYQGQHLDSFLKQIGGGSK 792
+++++NS+LPPR W +E WMQYVSK PA+RL VI LQE LD+KL+ERQA E GICPVREDLY+Q FDELIR VT++ PERGLL LRVRDEIRMTIDAYKTLY+SSVTFGV+KQLQAEQG+AEME +I L E KK+L+ V ELRNKVEVIEK +ERR +++KKRKEE+DFLKYQGQHLD FLK +GG K
Sbjct: 49 IEEVLNSILPPRMWADEGAADWMQYVSKTPASRLDVINLQEALDEKLMERQAREMGICPVREDLYSQCFDELIRQVTINSPERGLLLLRVRDEIRMTIDAYKTLYESSVTFGVRKQLQAEQGLAEMESKIEELSEAKKDLQNQVLELRNKVEVIEKRATERRQLEEKKRKEEIDFLKYQGQHLDQFLKTLGGPGK 243
BLAST of mRNA_P-littoralis_Contig121.59.1 vs. uniprot
Match: A0A6G0XVN6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XVN6_9STRA) HSP 1 Score: 266 bits (681), Expect = 1.150e-86 Identity = 141/254 (55.51%), Postives = 178/254 (70.08%), Query Frame = 1
Query: 31 PPTLVKFDPPIFAGLEPSSDANKNRNGNSTHXXXXXXXXXXXXXXXXXXXXXXRQGKTSQLDDMVNSMLPPREWTEETGTWMQYVSKEPATRLAVITLQEQLDKKLLERQALETGICPVREDLYTQAFDELIRHVTLDGPERGLLCLRVRDEIRMTIDAYKTLYDSSVTFGVKKQLQAEQGMAEMEEQIAGLEENKKELELHVSELRNKVEVIEKGESERRTVDDKKRKEEVDFLKYQGQHLDSFLKQIGGGSK 792
P +LVKFD PIF G + G TH + S+++D++N+MLP + W E+TG WM+YVS EP+TR VI LQEQ+D KL++RQA E+GICPVRED+Y+Q FDELIR VT++ PERGLL LR+RDEIRMT DAYKTLYDSS+TFGV+KQLQAEQGM +E++I L E K+E E V EL NK+E+IEK +ERR + +K+ KEE++FLKYQGQHLD+FLK GG SK
Sbjct: 7 PESLVKFDAPIFTG-------ENHDGGKKTHPTS-------------------KIDPVSRIEDVLNAMLPAQSWKEDTGFWMRYVSAEPSTRFDVIKLQEQMDAKLIKRQARESGICPVREDIYSQCFDELIRQVTINSPERGLLLLRIRDEIRMTTDAYKTLYDSSITFGVRKQLQAEQGMGSIEDKILLLTEEKREYENKVLELTNKLEIIEKRSNERRALQEKRYKEEIEFLKYQGQHLDAFLKSAGGSSK 234
BLAST of mRNA_P-littoralis_Contig121.59.1 vs. uniprot
Match: A0A1V9YGG0_9STRA (Dynein light chain intermediate polypeptide n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9YGG0_9STRA) HSP 1 Score: 265 bits (677), Expect = 5.150e-86 Identity = 129/195 (66.15%), Postives = 164/195 (84.10%), Query Frame = 1
Query: 205 SQLDDMVNSMLPPREWTEETGTWMQYVSKEPATRLAVITLQEQLDKKLLERQALETGICPVREDLYTQAFDELIRHVTLDGPERGLLCLRVRDEIRMTIDAYKTLYDSSVTFGVKKQLQAEQGMAEMEEQIAGLEENKKELELHVSELRNKVEVIEKGESERRTVDDKKRKEEVDFLKYQGQHLDSFLKQIGGGS 789
++++D++N+MLPP++W E+TG WM+Y S EP+TR VI LQEQ+D KL++RQA E+GICPVRED+Y Q FDELIR VT++ PERGLL LR+RDEIRMT DAYKTLY+SS+TFGV+KQLQAEQGM +E++IA L E K+E E V EL NK+EVIEK SERRT+ +K+ KEE++FLKYQGQHLD+FLK GGG+
Sbjct: 41 ARIEDVLNAMLPPQQWKEDTGYWMRYTSAEPSTRFDVIKLQEQMDAKLIKRQARESGICPVREDIYAQCFDELIREVTINSPERGLLLLRIRDEIRMTTDAYKTLYESSITFGVRKQLQAEQGMGSLEDRIAVLTEEKREFENKVLELTNKLEVIEKRSSERRTLQEKRYKEEIEFLKYQGQHLDAFLKSAGGGA 235 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig121.59.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig121.59.1 >prot_P-littoralis_Contig121.59.1 ID=prot_P-littoralis_Contig121.59.1|Name=mRNA_P-littoralis_Contig121.59.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=262bp MQFPMEVPPTLVKFDPPIFAGLEPSSDANKNRNGNSTHNSGNELGGGGAGback to top mRNA from alignment at P-littoralis_Contig121:246449..251769+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig121.59.1 ID=mRNA_P-littoralis_Contig121.59.1|Name=mRNA_P-littoralis_Contig121.59.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=5321bp|location=Sequence derived from alignment at P-littoralis_Contig121:246449..251769+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig121:246449..251769+ >mRNA_P-littoralis_Contig121.59.1 ID=mRNA_P-littoralis_Contig121.59.1|Name=mRNA_P-littoralis_Contig121.59.1|organism=Pylaiella littoralis U1_48|type=CDS|length=786bp|location=Sequence derived from alignment at P-littoralis_Contig121:246449..251769+ (Pylaiella littoralis U1_48)back to top |