mRNA_P-littoralis_Contig121.45.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig121.45.1
Unique NamemRNA_P-littoralis_Contig121.45.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig121.45.1 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE)

HSP 1 Score: 346 bits (888), Expect = 1.940e-116
Identity = 167/242 (69.01%), Postives = 196/242 (80.99%), Query Frame = 1
Query:   19 QILGRGNCFD-INQLSLMSKSMAAATFHKFCKNFAKEMFEEHMYLPTGTYQDEVMDCYRKLGFTAAIGSTDVTHVGWGMCPFTVGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDETIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEMSWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNM 741
            Q+LG+GNCFD + QLS MSKSMA  TFHKFC++FA EMF+EH+YLPTGTY DEVM  + +LG+T A GSTDVTH+GW MCPFT+GRSFTGKEGFPT+A++VTVDH GR + VT GFTGATND+TI+RYD+ V  IR    Y +REYKLRKA+GT+  R+GC+LIVDNGYHE  WVTL+APSKYP   +D AFS+ LESVRKDV CF        RILKLR+ YH RE +DNIFFTCCILHNM
Sbjct:   42 QVLGKGNCFDDVEQLSKMSKSMAQPTFHKFCRHFAAEMFDEHIYLPTGTYLDEVMGIFHQLGWTGACGSTDVTHIGWNMCPFTLGRSFTGKEGFPTIAYDVTVDHDGRDLAVTNGFTGATNDKTIIRYDSGVNKIRTASQYTEREYKLRKANGTKRMRRGCFLIVDNGYHE--WVTLIAPSKYPQRNEDTAFSRDLESVRKDVGCF--------RILKLRMPYHKREYVDNIFFTCCILHNM 273          
BLAST of mRNA_P-littoralis_Contig121.45.1 vs. uniprot
Match: A0A6H5KSI7_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSI7_9PHAE)

HSP 1 Score: 337 bits (865), Expect = 6.200e-113
Identity = 163/243 (67.08%), Postives = 192/243 (79.01%), Query Frame = 1
Query:   16 LQILGRGNCFD-INQLSLMSKSMAAATFHKFCKNFAKEMFEEHMYLPTGTYQDEVMDCYRKLGFTAAIGSTDVTHVGWGMCPFTVGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDETIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEMSWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNM 741
            L++LG+GNCFD + QLS MS+S+A A FHKFC++ A EMF+EH+YLPTGTY DEVM  + +LG T A GSTDVTH+G  MCPFT+GRSFTGKEGFPT+A+EVTVDHAGRA+ VT GF G TND+T +RYD+ V  IR    Y +REYKLRK +GTE TR+GC+LIVDNGY+E +              +D AFS+ LESVRKDVECFFGILKGRFRILKLR+ YH RE IDNIFFTCCILHNM
Sbjct:  137 LKVLGKGNCFDDVEQLSKMSESIAQALFHKFCRHSAAEMFDEHIYLPTGTYLDEVMGIFHQLGCTGACGSTDVTHIGRNMCPFTLGRSFTGKEGFPTIAYEVTVDHAGRALAVTNGFAGGTNDKTTIRYDSGVNKIRTESQYTEREYKLRKVNGTERTRRGCFLIVDNGYYESN--------------EDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNM 365          
BLAST of mRNA_P-littoralis_Contig121.45.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE)

HSP 1 Score: 339 bits (869), Expect = 5.480e-112
Identity = 157/248 (63.31%), Postives = 198/248 (79.84%), Query Frame = 1
Query:    1 QILTALQILGRGNCF-DINQLSLMSKSMAAATFHKFCKNFAKEMFEEHMYLPTGTYQDEVMDCYRKLGFTAAIGSTDVTHVGWGMCPFTVGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDETIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEMSWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNM 741
            ++L  LQIL RGNCF DI  +S +S   AAATFH+F + FA+EM+ EH++LPTG YQ +VM  Y +LGF+ A GSTDVTH+ WGMCP+   RS+TGKEG+PT+A++VTVDH  R + VT GFTG+TND++I+RYD AV  IR + +Y ++E+ + +ADGT +  KGCYL+VDNGYH+  WVTL+ PSKYP D +D AFSK LESVRKDVECFFGI+KGRFRILKL + YH +EDIDN+FFTCCILHNM
Sbjct:  158 KVLACLQILARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPTGDYQKKVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHK--WVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNM 403          
BLAST of mRNA_P-littoralis_Contig121.45.1 vs. uniprot
Match: A0A6H5KEB6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEB6_9PHAE)

HSP 1 Score: 324 bits (831), Expect = 2.170e-104
Identity = 159/238 (66.81%), Postives = 184/238 (77.31%), Query Frame = 1
Query:   97 HKFCKNFAKEMFEEHMYLPTGTYQDEVMDCYRKLGFTAAIGSTDVTHVGWGMCPFTVGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDETIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNG----------YHE-------------MSWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNM 741
            HKFC++FA EMF+EH+YL TGTY DEVM  + +LG T A GST+VTH+GW MCPFT+GRSFTGKEGFPT+A EVTVDHAGRA+ VT GFTGATND+TI+RYD+ V  IR    Y +REYKLRKA+GTE TR+GC+LIVDNG          +H+             + WVTL+APSKYP   +D AFS+ LESVRKDVECFFGILKGRFRILKLR+ YH RE IDNIFFTCCILHNM
Sbjct:  246 HKFCRHFAAEMFDEHIYLLTGTYLDEVMGIFHQLGCTGACGSTNVTHIGWNMCPFTLGRSFTGKEGFPTIACEVTVDHAGRALAVTNGFTGATNDKTIIRYDSGVNKIRTESQYTEREYKLRKANGTERTRRGCFLIVDNGMSVPKDLCVVHHKNIVAKLPSSERVLIWWVTLIAPSKYPQSNEDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNM 483          
BLAST of mRNA_P-littoralis_Contig121.45.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE)

HSP 1 Score: 316 bits (810), Expect = 4.380e-104
Identity = 151/248 (60.89%), Postives = 189/248 (76.21%), Query Frame = 1
Query:    1 QILTALQILGRGNCF-DINQLSLMSKSMAAATFHKFCKNFAKEMFEEHMYLPTGTYQDEVMDCYRKLGFTAAIGSTDVTHVGWGMCPFTVGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDETIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEMSWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNM 741
            Q+L  LQIL RGN F DI  +S +S    A+TFH+FCK FA E+++E++YLPTG    +VM+ Y ++GF  A+GSTDVTH+ WGMCP+   R +TGKEG PT+AF+VTVDH+GR + VT+GFTGATND+TI+RYD AV  IR + VY +++YKL   DG +F  KGCYL+VDNGYH+  W TL+ PSK P D  D  FSK LES RKDVEC+FGILKGRFRI KL + +H +E IDN+FFTCCILHNM
Sbjct:   83 QVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHK--WRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNM 328          
BLAST of mRNA_P-littoralis_Contig121.45.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE)

HSP 1 Score: 315 bits (806), Expect = 2.750e-102
Identity = 150/248 (60.48%), Postives = 189/248 (76.21%), Query Frame = 1
Query:    1 QILTALQILGRGNCF-DINQLSLMSKSMAAATFHKFCKNFAKEMFEEHMYLPTGTYQDEVMDCYRKLGFTAAIGSTDVTHVGWGMCPFTVGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDETIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEMSWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNM 741
            ++L  LQIL RGN F DI  +S +S    A+TFH+FCK FA E+++E++YLPTG    +VM+ Y ++GF  A+GSTDVTH+ WGMCP+   R +TGKEG PT+AF+VTVDH+GR + VT+GFTGATND+TI+RYD AV  IR + VY +++YKL   DG +F  KGCYL+VDNGYH+  W TL+ PSK P D  D  FSK LES RKDVEC+FGILKGRFRI KL + +H +E IDN+FFTCCILHNM
Sbjct:  174 KVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHK--WRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNM 419          
BLAST of mRNA_P-littoralis_Contig121.45.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE)

HSP 1 Score: 300 bits (769), Expect = 4.240e-98
Identity = 146/250 (58.40%), Postives = 184/250 (73.60%), Query Frame = 1
Query:    1 QILTALQILGRGNCF-DINQLSLMSKSMAAATFHKFCKNFAKEMFEEHMYLPT--GTYQDEVMDCYRKLGFTAAIGSTDVTHVGWGMCPFTVGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDETIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEMSWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNM 741
            ++L  L ILGRGNCF  I Q+S MS       FHKFCK+FA+EM++EH+YLP+      D VM  Y +LGF+ A+GS DVTH+GW  CP+ + RS+TGKEG PT+ ++VTV+HAGRAI VT+GFT +TND+T V +DA V+ IR +  Y ++ + +   DGT  T KGCYL+VDNGYH+  W  LM P+KYP   +D  FSK LESVRKDVECFFGILKG FRI K+ +AYH +E IDN+FFTCCILHNM
Sbjct:   98 KVLAWLTILGRGNCFASIYQVSWMSAKTVQTMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTVCWDAVVEKIRTDNQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHK--WKILMEPTKYPLSENDILFSKRLESVRKDVECFFGILKGCFRIQKVAMAYHEQERIDNVFFTCCILHNM 345          
BLAST of mRNA_P-littoralis_Contig121.45.1 vs. uniprot
Match: A0A6H5K872_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K872_9PHAE)

HSP 1 Score: 298 bits (763), Expect = 7.860e-97
Identity = 148/243 (60.91%), Postives = 173/243 (71.19%), Query Frame = 1
Query:   16 LQILGRGNCFD-INQLSLMSKSMAAATFHKFCKNFAKEMFEEHMYLPTGTYQDEVMDCYRKLGFTAAIGSTDVTHVGWGMCPFTVGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDETIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEMSWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNM 741
            L +LG+GNCFD + QLS MS SMA ATFHKFC++FA EMF+EH++ PT TY DE M  + +LG T A  STDVTH+   MCPFT+GRSFTGKEGFPT+A+EVTVDHA RA+ VT GFTGA ND+T++ YD+ V  IR    Y +R+YKLRKA+GTE TR+GC+ IVDNGYHE                              DVECFFGILKGRFRILKLR+ YH RE IDNIFFTCCI HNM
Sbjct:  102 LTVLGKGNCFDDVEQLSKMSISMAQATFHKFCRHFAAEMFDEHIFSPTETYLDEFMGIFHQLGCTGACRSTDVTHIDCNMCPFTLGRSFTGKEGFPTIAYEVTVDHASRALAVTNGFTGAMNDKTVIWYDSGVNDIRTESQYTERQYKLRKANGTERTRRGCFSIVDNGYHE------------------------------DVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCIRHNM 314          
BLAST of mRNA_P-littoralis_Contig121.45.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE)

HSP 1 Score: 292 bits (747), Expect = 6.320e-94
Identity = 145/250 (58.00%), Postives = 179/250 (71.60%), Query Frame = 1
Query:    1 QILTALQILGRGNCF-DINQLSLMSKSMAAATFHKFCKNFAKEMFEEHMYLPT--GTYQDEVMDCYRKLGFTAAIGSTDVTHVGWGMCPFTVGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDETIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEMSWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNM 741
            ++L  L ILGRGN F  I  LS MS       FH+FC++FA EM++EH++LP+      D VM  Y KLGF  A+GSTDVTH+GW  CP+  GRS+TGKEG PT+ ++VTV+HAGR + VT+GFTG+TND+TI+  D AV  IR +K Y ++ + + K DGT  T KGCYLIVDNGYH+  W  L+ PSKYP    D  FSK LESVRKDVECFFGILK RFRILKL + Y  +E +D +FFTCCILHNM
Sbjct:  127 KVLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHK--WRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNM 374          
BLAST of mRNA_P-littoralis_Contig121.45.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE)

HSP 1 Score: 288 bits (736), Expect = 1.750e-92
Identity = 149/278 (53.60%), Postives = 184/278 (66.19%), Query Frame = 1
Query:    1 QILTALQILGRGNCF-DINQLSLMSKSMAAATFHKFCKNFAKEMFEEHMYLPT--GTYQDEVMDCYRKLGFTAAIGSTDVTHVGWGMCPFTVGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDETIVRYDAAVQTIRNNKVYK----------------------------DREYKLRKADGTEFTRKGCYLIVDNGYHEMSWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNM 741
            ++L  L ILGRGNCF  I Q+S MS       FHKFC++FA+EM++E ++LPT      D VM  Y +LGFT A+GS DVTH+ W  CP+   RS+TGKEGFPT+A++VTVDHAGRAI VT+GFTG+TND+TIV +D AV+ I  +K Y                             ++ + +   DGT  T KGCYL+VDNGYH+  W  L+ PSKYP   +D  FSK LESVRKDVECFFGILKGRFRILKL + Y  +E IDN+FFTC ILHNM
Sbjct:   85 KVLAWLTILGRGNCFASIYQMSWMSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTTTTLKGCYLLVDNGYHK--WQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMEYQSQERIDNVFFTCYILHNM 360          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig121.45.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K796_9PHAE1.940e-11669.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KSI7_9PHAE6.200e-11367.08DDE Tnp4 domain-containing protein (Fragment) n=1 ... [more]
A0A6H5JAU4_9PHAE5.480e-11263.31Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KEB6_9PHAE2.170e-10466.81DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KY50_9PHAE4.380e-10460.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPH7_9PHAE2.750e-10260.48Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHI0_9PHAE4.240e-9858.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K872_9PHAE7.860e-9760.91DDE Tnp4 domain-containing protein (Fragment) n=1 ... [more]
A0A6H5JBE2_9PHAE6.320e-9458.00Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNX4_9PHAE1.750e-9253.60DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig121contigP-littoralis_Contig121:146288..147593 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FSK2
PFAMsPlant_tran
Model size741
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue8.37e-85
EggNOG OGs2E2RF@1|root,2S9YA@2759|Eukaryota
DescriptionPlant transposon protein
Cds size741
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789519.9161627-CDS-P-littoralis_Contig121:146287..1464941680789519.9161627-CDS-P-littoralis_Contig121:146287..146494Pylaiella littoralis U1_48CDSP-littoralis_Contig121 146288..146494 -
1680789519.9257164-CDS-P-littoralis_Contig121:147059..1475931680789519.9257164-CDS-P-littoralis_Contig121:147059..147593Pylaiella littoralis U1_48CDSP-littoralis_Contig121 147060..147593 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig121.45.1prot_P-littoralis_Contig121.45.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig121 146288..147593 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig121.45.1

>prot_P-littoralis_Contig121.45.1 ID=prot_P-littoralis_Contig121.45.1|Name=mRNA_P-littoralis_Contig121.45.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=247bp
QILTALQILGRGNCFDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHMYL
PTGTYQDEVMDCYRKLGFTAAIGSTDVTHVGWGMCPFTVGRSFTGKEGFP
TLAFEVTVDHAGRAIGVTQGFTGATNDETIVRYDAAVQTIRNNKVYKDRE
YKLRKADGTEFTRKGCYLIVDNGYHEMSWVTLMAPSKYPGDVDDAAFSKM
LESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNM
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mRNA from alignment at P-littoralis_Contig121:146288..147593-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig121.45.1 ID=mRNA_P-littoralis_Contig121.45.1|Name=mRNA_P-littoralis_Contig121.45.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1306bp|location=Sequence derived from alignment at P-littoralis_Contig121:146288..147593- (Pylaiella littoralis U1_48)
CAGATCTTGACGGCCCTCCAGATACTCGGCAGGGGTAACTGCTTCGACAT CAACCAGCTGTCGTTAATGAGCAAATCTATGGCGGCAGCAACGTTCCACA AGTTCTGCAAGAACTTCGCGAAGGAGATGTTCGAGGAGCATATGTACCTT CCAACAGGAACGTACCAAGACGAAGTTATGGACTGCTACCGTAAACTGGG TTTTACTGCAGCAATCGGTTCTACCGACGTCACTCACGTCGGCTGGGGCA TGTGTCCGTTCACCGTTGGCCGTTCTTTCACGGGCAAGGAGGGGTTTCCA ACCCTGGCGTTCGAGGTTACCGTCGACCACGCGGGGCGCGCCATTGGCGT CACGCAAGGGTTCACCGGTGCGACCAACGACGAGACGATCGTCCGCTACG ACGCAGCCGTACAGACCATCAGGAACAACAAAGTGTACAAGGATCGAGAG TACAAGCTCAGGAAGGCGGATGGCACGGAGTTCACCCGGAAAGGATGCTA TTTGATCGTCGACAACGGCTATCACGAGATGAGTGTATTAGGGGCGTGGG TAGTATAGAATATCCGAACGTAGTGCGTGCTCCGTAACGCTTCGGGTTGA TGTGAAGCCCGAAAAAAAACACGCCGGTACACCGAAAGCAGACCAATGCC ATATTTGTCGGTACTGAATGAGGATCTTTATGGCGTGTCGGCCCCGTGCA TCGGGCGTCGACCTTACGCAGCGGCACACCAAGGTAAAAAACGTTTTGCC GCTTCGCGTTCATTCTGTTCGTAATTGTTTTTGTGCTGGTTCCGTTTGGA CGGTTGCGTTCACTTTCTTATATTTCGAGCATACATTACCCCATTTTTAA CACCAAAGGTTTTAAAAAACAAATCTGCTCAGGGGTGGTCAGATGGCAAA TATTGTACTTCGAAGTACAAAGTTGTAGGCATCTGTGTTGTCCACATGTC CACACGGTTCCTCGTTCCCCCCGAAGAGTTTGATCGTGAAAATATGTGCG TCGGGGCCTGAGGTCTCCAGAGCCTCTCCGTAGCTCACCAGTCGTCCCTT TCAACCCCCCACCCTGCTGCTGTTGTGCCGTCGTGTGCCAAATCAACAGT GGGTCACCCTCATGGCCCCATCGAAGTACCCGGGTGACGTGGATGACGCC GCCTTCTCCAAGATGCTTGAGAGTGTGCGCAAAGATGTGGAGTGTTTCTT CGGCATTCTGAAAGGGCGCTTCAGAATCCTGAAGCTCCGCCTGGCCTACC ACTGCAGGGAAGACATCGATAACATCTTCTTCACGTGCTGCATTCTCCAC AACATG
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Coding sequence (CDS) from alignment at P-littoralis_Contig121:146288..147593-

>mRNA_P-littoralis_Contig121.45.1 ID=mRNA_P-littoralis_Contig121.45.1|Name=mRNA_P-littoralis_Contig121.45.1|organism=Pylaiella littoralis U1_48|type=CDS|length=741bp|location=Sequence derived from alignment at P-littoralis_Contig121:146288..147593- (Pylaiella littoralis U1_48)
CAGATCTTGACGGCCCTCCAGATACTCGGCAGGGGTAACTGCTTCGACAT
CAACCAGCTGTCGTTAATGAGCAAATCTATGGCGGCAGCAACGTTCCACA
AGTTCTGCAAGAACTTCGCGAAGGAGATGTTCGAGGAGCATATGTACCTT
CCAACAGGAACGTACCAAGACGAAGTTATGGACTGCTACCGTAAACTGGG
TTTTACTGCAGCAATCGGTTCTACCGACGTCACTCACGTCGGCTGGGGCA
TGTGTCCGTTCACCGTTGGCCGTTCTTTCACGGGCAAGGAGGGGTTTCCA
ACCCTGGCGTTCGAGGTTACCGTCGACCACGCGGGGCGCGCCATTGGCGT
CACGCAAGGGTTCACCGGTGCGACCAACGACGAGACGATCGTCCGCTACG
ACGCAGCCGTACAGACCATCAGGAACAACAAAGTGTACAAGGATCGAGAG
TACAAGCTCAGGAAGGCGGATGGCACGGAGTTCACCCGGAAAGGATGCTA
TTTGATCGTCGACAACGGCTATCACGAGATGAGTTGGGTCACCCTCATGG
CCCCATCGAAGTACCCGGGTGACGTGGATGACGCCGCCTTCTCCAAGATG
CTTGAGAGTGTGCGCAAAGATGTGGAGTGTTTCTTCGGCATTCTGAAAGG
GCGCTTCAGAATCCTGAAGCTCCGCCTGGCCTACCACTGCAGGGAAGACA
TCGATAACATCTTCTTCACGTGCTGCATTCTCCACAACATG
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