mRNA_P-littoralis_Contig1209.7.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1209.7.1 vs. uniprot
Match: D7FV02_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV02_ECTSI) HSP 1 Score: 117 bits (294), Expect = 1.250e-25 Identity = 141/430 (32.79%), Postives = 198/430 (46.05%), Query Frame = 1
Query: 1 LGIPLSKDLLWGFRRVLVKFGGKKLAWARRPSRLSPSRTLPSPPSRQSR*TGQSGGQERRTPSSSSRSRTSSC--W*RRRRMISIC-------------PYRWTSTRRSTTLPWAQVHRMKGLTFTQNPGACWTKFGALKTEYTKGTQAQFDMGPQSEDDFESGKTSEDYMMKLLQYMWTQSTEYKTAAAQDLTGD------------------------ESGGAATXXXXXXXXXXXXXXXXXXXTAPGRGLRRPRAMAKEDVGVTSSSGVGSGSAAGLVTGGNAGTAGSARKKLPEMPEGWLYPHLIMACAWSPWSGNTPSEWKNLCASGGKPEALKEEDK------------LDTGSNPLSSPAAMAXXXXXXXXXXXXXXXXXXXXTEAAAKAEADRLRRAQKDKENMALMKETEVTRKKGVAAME 1137
L I L++D++WGF R KFGG+K+ A L + +P + + G+ + R + S R + + W I +C P+ W TTL + R TF +NP A +TKF ALKTEYTKG Q FD P+S + SG + D + L M+ ++T+ AA +D D + A XXXXXXXXXXXXXXXXXXXT+P RR + ++ ++SG GSG+ G G ++P+ + YP+L++AC WS WSGNTPSEWK+L AS G + DK + T NP+ SP AM A K E +++++ K+KEN+AL E TRK+G+AAME
Sbjct: 14 LNIDLTEDMMWGFHRYCDKFGGRKMNQAG----LKALQCVPIAHAALAVKQGEDMKSDVRNAAMSKRMQEIAVPGW------IKVCEAAIKDSQGELVFPHGWKDALYYTTLGTGENPRQ---TFMKNPKALFTKFKALKTEYTKGAQLWFDTHPESSTELNSGTQTTDALDDLSADMYRKATK-GNAAKEDAAADIFFNTPRRSAEGVVVSGVTTTSPLPTPAADAXXXXXXXXXXXXXXXXXXXTSPQALARRAAEALRREMASPTASGSGSGANLGRPEGNE------------DIPDDYYYPYLLLACPWSSWSGNTPSEWKHLAASSGPRNRASKGDKGNSNGNDNSNEVVITDDNPIGSPRAMGLMNANGDAVSRRQYF-------ANIKKEKEQVKKDAKEKENVALRNEALDTRKRGLAAME 410
BLAST of mRNA_P-littoralis_Contig1209.7.1 vs. uniprot
Match: A0A6H5LQW7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LQW7_9PHAE) HSP 1 Score: 90.5 bits (223), Expect = 2.290e-18 Identity = 43/75 (57.33%), Postives = 58/75 (77.33%), Query Frame = 3
Query: 78 LGQKTFQALPIAYAAVSTKQAKQMNGPERGTRTTDSLVKFAIPNFLLLVKEAAHDLDLPLPLDLDEKINYTTLGT 302
L QKTFQA PIAYAA++ KQ++QM+ ER T +LV+FAIP F++L K AA L+LPLPLD+++K+ T+LGT
Sbjct: 56 LAQKTFQAFPIAYAAITCKQSEQMDKGERDVVCTKTLVEFAIPQFIVLAKAAAKKLELPLPLDIEDKMYLTSLGT 130
BLAST of mRNA_P-littoralis_Contig1209.7.1 vs. uniprot
Match: A0A6H5KAW6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAW6_9PHAE) HSP 1 Score: 93.2 bits (230), Expect = 6.190e-17 Identity = 44/76 (57.89%), Postives = 59/76 (77.63%), Query Frame = 3
Query: 78 LGQKTFQALPIAYAAVSTKQAKQMNGPERGTRTTDSLVKFAIPNFLLLVKEAAHDLDLPLPLDLDEKINYTTLGTG 305
L QKTFQA PIAYAA++ KQ++QM+ ER T +LV+FAIP F++L K AA L+LPLPLD+++K+ T+LGTG
Sbjct: 119 LAQKTFQAFPIAYAAITCKQSEQMDKGERDVVCTKTLVEFAIPQFIVLAKAAAKKLELPLPLDIEDKMYLTSLGTG 194
BLAST of mRNA_P-littoralis_Contig1209.7.1 vs. uniprot
Match: A0A6H5KGF1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGF1_9PHAE) HSP 1 Score: 75.9 bits (185), Expect = 5.060e-12 Identity = 47/121 (38.84%), Postives = 64/121 (52.89%), Query Frame = 1
Query: 775 EMPEGWLYPHLIMACAWSPWSGNTPSEWKNLCASGGKPEALKEEDKLDTGSNPLSSPAAMAXXXXXXXXXXXXXXXXXXXXTEAAAKAEADRLRRAQKDKENMALMKETEVTRKKGVAAME 1137
E+PE W++P L++ A+SPWSG PSEWK+L +S G + K D NP+ SPA M+ AA K E ++ R+A DKE KET T+KKG+AA+E
Sbjct: 117 EVPEWWIFPFLLLTAAYSPWSGQAPSEWKHLDSSDGPSKKRKGGDVNVDSENPVCSPAVMSRLDPNGDALSRRQHF-------AAIKREKEQERKATADKELQESRKETLETKKKGLAALE 230
BLAST of mRNA_P-littoralis_Contig1209.7.1 vs. uniprot
Match: A0A6H5JTM3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTM3_9PHAE) HSP 1 Score: 63.2 bits (152), Expect = 2.110e-7 Identity = 43/120 (35.83%), Postives = 59/120 (49.17%), Query Frame = 1
Query: 778 MPEGWLYPHLIMACAWSPWSGNTPSEWKNLCASGGKPEALKEEDKLDTGSNPLSSPAAMAXXXXXXXXXXXXXXXXXXXXTEAAAKAEADRLRRAQKDKENMALMKETEVTRKKGVAAME 1137
+PE W++P L++ A+SPWSG PSEWK+L +S G + K D NP+ SPA M+ AA K E ++ +A +KE KE T KKG+AA E
Sbjct: 137 VPEWWVFPFLLLTAAYSPWSGQAPSEWKHLDSSDGPSKKRKGADVTVDSENPVCSPAVMSRLNPNGDALSRRQHF-------AAIKREKEQEMKAAAEKELQEARKEPLET-KKGLAAFE 248
BLAST of mRNA_P-littoralis_Contig1209.7.1 vs. uniprot
Match: A0A6H5KDD8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDD8_9PHAE) HSP 1 Score: 60.1 bits (144), Expect = 3.890e-7 Identity = 27/57 (47.37%), Postives = 36/57 (63.16%), Query Frame = 1
Query: 775 EMPEGWLYPHLIMACAWSPWSGNTPSEWKNLCASGGKPEALKEEDKLDTGSNPLSSP 945
E+PE W++P L++ A+SPWSG PSEWK+L +S G K D NP+SSP
Sbjct: 117 EVPEWWVFPFLLLTAAYSPWSGQAPSEWKHLDSSDGPSIKRKGGDVTVDSDNPVSSP 173
BLAST of mRNA_P-littoralis_Contig1209.7.1 vs. uniprot
Match: A0A6H5K7S4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7S4_9PHAE) HSP 1 Score: 61.2 bits (147), Expect = 7.880e-7 Identity = 27/58 (46.55%), Postives = 37/58 (63.79%), Query Frame = 1
Query: 775 EMPEGWLYPHLIMACAWSPWSGNTPSEWKNLCASGGKPEALKEEDKLDTGSNPLSSPA 948
E+PE W++P L++ A+SPWSG PSEWK+L +S G + K D NP+ SPA
Sbjct: 105 EVPEWWVFPFLLLTAAYSPWSGQAPSEWKHLDSSDGPSKKRKGGDVTVDSENPVCSPA 162
BLAST of mRNA_P-littoralis_Contig1209.7.1 vs. uniprot
Match: A0A6H5KJW8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJW8_9PHAE) HSP 1 Score: 60.8 bits (146), Expect = 9.220e-7 Identity = 42/121 (34.71%), Postives = 58/121 (47.93%), Query Frame = 1
Query: 775 EMPEGWLYPHLIMACAWSPWSGNTPSEWKNLCASGGKPEALKEEDKLDTGSNPLSSPAAMAXXXXXXXXXXXXXXXXXXXXTEAAAKAEADRLRRAQKDKENMALMKETEVTRKKGVAAME 1137
E+PE W++P L++ A+SPWSG PSEWK+L +S G + D NP+ SPA M+ AA K E + R+A DKE + + KKG AA+E
Sbjct: 120 EVPEWWVFPFLLLTAAYSPWSGQAPSEWKHLDSSDGLSKKRTGGDVTVDSENPVYSPAVMSRLNPNGDALSRRQHF-------AAIKREKEEERKAAADKE-LQXXXXXALETKKGPAALE 232
BLAST of mRNA_P-littoralis_Contig1209.7.1 vs. uniprot
Match: A0A6H5KVE3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVE3_9PHAE) HSP 1 Score: 57.4 bits (137), Expect = 1.770e-6 Identity = 27/61 (44.26%), Postives = 36/61 (59.02%), Query Frame = 1
Query: 775 EMPEGWLYPHLIMACAWSPWSGNTPSEWKNLCASGGKPEALKEEDKLDTGSNPLSSPAAMA 957
E+ E W++P L+ A+SPWSG PSEWK+L +S G K D NP+ SPA M+
Sbjct: 31 EVSEWWVFPFLLHTAAYSPWSGQAPSEWKHLDSSDGPSIKRKGGDVTVDSENPVCSPAVMS 91 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1209.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1209.7.1 >prot_P-littoralis_Contig1209.7.1 ID=prot_P-littoralis_Contig1209.7.1|Name=mRNA_P-littoralis_Contig1209.7.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=301bp MISICPYRWTSTRRSTTLPWAQVHRMKGLTFTQNPGACWTKFGALKTEYTback to top mRNA from alignment at P-littoralis_Contig1209:10868..14337+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1209.7.1 ID=mRNA_P-littoralis_Contig1209.7.1|Name=mRNA_P-littoralis_Contig1209.7.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3470bp|location=Sequence derived from alignment at P-littoralis_Contig1209:10868..14337+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1209:10868..14337+ >mRNA_P-littoralis_Contig1209.7.1 ID=mRNA_P-littoralis_Contig1209.7.1|Name=mRNA_P-littoralis_Contig1209.7.1|organism=Pylaiella littoralis U1_48|type=CDS|length=903bp|location=Sequence derived from alignment at P-littoralis_Contig1209:10868..14337+ (Pylaiella littoralis U1_48)back to top |