mRNA_P-littoralis_Contig1201.1.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1201.1.1
Unique NamemRNA_P-littoralis_Contig1201.1.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1201.1.1 vs. uniprot
Match: A0A6H5K3F2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3F2_9PHAE)

HSP 1 Score: 385 bits (990), Expect = 2.130e-130
Identity = 184/293 (62.80%), Postives = 222/293 (75.77%), Query Frame = 1
Query:    7 RERRAWPLYIKPMLGDGTFKGRFRMHHVDFKILVDHLRPELERDTTMRALRNGAVPVEYQVGLTLRWLAGASMYEGMDGHVIARSTAYQTAFRVIKAINDCTELDCKWPATPEDVADKAAHFEKRCSVGVIRQCVGAMDGLFVRTIRPTTRDTAEPNSYYSGHKKGFGMNFQGICDAEYRIIAWTMNSPGCQNDRTAFKFSGFEQLLQDLPPDYFILGDAAYPASDRVLVPYPGTNLPTFHDAFNFWQSQGRISIEQTFGIMVRTWGILWRPMEFGLGRVVEVVGAVVRLHNF 885
            RERR+W  Y KPM+ DGTF+ RFRM + +F +L D LRP+LER+  M ALRNG +PVE+Q+ + LR+LAG S++E MDG+VIARSTAY    RVI AIN   ELDC WP   ED  D+   + +R + GVIR CVGAMDGLFVR  +P+ R    P S+YSGHKKGFGMNFQG+C+A Y IIAWTMN PG  NDRTAFK S F  +L+ LPP  +I+GDAAYPASD+VLVPYPGT+L    DA+NF+QSQ RISIEQ FGIMV+TWGILWRP++  L RV  V+ +VVRLHNF
Sbjct:   48 RERRSWYTYAKPMVQDGTFRLRFRMDYTEFALLADMLRPKLERNERMGALRNGVIPVEFQLAMALRFLAGGSVFEVMDGNVIARSTAYAIVHRVIDAINQTRELDCVWPEG-EDALDQCGMYRRRSTNGVIRMCVGAMDGLFVRMTQPSLRRHVNPRSFYSGHKKGFGMNFQGVCNARYEIIAWTMNCPGSCNDRTAFKHSVFGTVLKTLPPGAYIVGDAAYPASDQVLVPYPGTSLTRSQDAYNFYQSQARISIEQAFGIMVKTWGILWRPLDMRLERVSSVINSVVRLHNF 339          
BLAST of mRNA_P-littoralis_Contig1201.1.1 vs. uniprot
Match: A0A6H5K6M2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6M2_9PHAE)

HSP 1 Score: 374 bits (959), Expect = 1.340e-125
Identity = 180/293 (61.43%), Postives = 221/293 (75.43%), Query Frame = 1
Query:    7 RERRAWPLYIKPMLGDGTFKGRFRMHHVDFKILVDHLRPELERDTTMRALRNGAVPVEYQVGLTLRWLAGASMYEGMDGHVIARSTAYQTAFRVIKAINDCTELDCKWPATPEDVADKAAHFEKRCSVGVIRQCVGAMDGLFVRTIRPTTRDTAEPNSYYSGHKKGFGMNFQGICDAEYRIIAWTMNSPGCQNDRTAFKFSGFEQLLQDLPPDYFILGDAAYPASDRVLVPYPGTNLPTFHDAFNFWQSQGRISIEQTFGIMVRTWGILWRPMEFGLGRVVEVVGAVVRLHNF 885
            RERR++  Y++PM+ D TF+ RFRM + DF  L D LRP+L+RD  M ALRNGA+PVE+Q+ +TLR+LAG S++E MD +VIA+STAY    RVI AIN   +L+CKWP   +D   +A  + +R + GVIR+CVGAMDGLFVR I P  +  A P S+YSGHKK FGMNFQGIC+A Y II WTMN PG QNDRTAFK SGF+ LL  +PPD FI+GDAAYPAS+RVLVP PGT L    DA+NF+QSQ RISIEQ FGI+V+TW ILW+P+   L RV  V+ A+VRLHNF
Sbjct:   52 RERRSFYTYVRPMVEDNTFRKRFRMDYTDFMTLADILRPKLQRDEKMGALRNGAIPVEFQLAMTLRFLAGGSVFEVMDSNVIAKSTAYAIVHRVIDAINQTRQLNCKWPYG-DDAEAQAELYRRRSTNGVIRRCVGAMDGLFVRLIPPCLKRHAVPGSFYSGHKKAFGMNFQGICNASYEIITWTMNCPGSQNDRTAFKHSGFDALLSKMPPDCFIVGDAAYPASNRVLVPDPGTALTLSQDAYNFYQSQARISIEQAFGILVKTWEILWKPLAIRLDRVGHVMNAIVRLHNF 343          
BLAST of mRNA_P-littoralis_Contig1201.1.1 vs. uniprot
Match: A0A6H5L6B6_9PHAE (DDE Tnp4 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6B6_9PHAE)

HSP 1 Score: 357 bits (917), Expect = 2.390e-119
Identity = 167/263 (63.50%), Postives = 204/263 (77.57%), Query Frame = 1
Query:  100 ILVDHLRPELERDTTMRALRNGAVPVEYQVGLTLRWLAGASMYEGMDGHVIARSTAYQTAFRVIKAINDCTELDCKWPATPEDVADKAAHFEKRCSVGVIRQCVGAMDGLFVRTIRPTTRDTAEPNSYYSGHKKGFGMNFQGICDAEYRIIAWTMNSPGCQNDRTAFKFSGFEQLLQDLPPDYFILGDAAYPASDRVLVPYPGTNLPTFHDAFNFWQSQGRISIEQTFGIMVRTWGILWRPMEFGLGRVVEVVGAVVRLHNFC 888
            +LVDHLRP L+++  M  LRNGA+PVE QV +TLRWLAG S+YE MDGHVIARSTAY     VI A+N C EL+CKWP   ED A  A  F  R S+ V+R+CVGA DGLFVR I+P+ ++ AEPN YY+GHKKGFGMNFQ +CDA+YRI+AW MN PG QNDRTAF FSGF++LL  LP  +F++GDAAY AS+RV+VP+PGT+L    DA N++ SQ R++IEQT+GI+VR WGILWRPME  + +   VV AVVRLHNFC
Sbjct:   72 VLVDHLRPALQKNQQMGLLRNGAIPVEDQVAMTLRWLAGGSIYECMDGHVIARSTAYHVTSTVINALNACPELNCKWPEG-EDAARAAELFRNRSSMDVVRKCVGATDGLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQAVCDAQYRIMAWMMNCPGSQNDRTAFNFSGFDKLLAGLPEGHFVVGDAAYGASERVVVPFPGTSLSASQDACNYYVSQCRMAIEQTYGILVRRWGILWRPMEVRIEKFEHVVNAVVRLHNFC 333          
BLAST of mRNA_P-littoralis_Contig1201.1.1 vs. uniprot
Match: A0A6H5JJA1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJA1_9PHAE)

HSP 1 Score: 325 bits (833), Expect = 6.320e-107
Identity = 163/294 (55.44%), Postives = 201/294 (68.37%), Query Frame = 1
Query:    7 RERRAWPLYIKPMLGDGTFKGRFRMHHVDFKILVDHLRPELERDTTMRALRNGAVPVEYQVGLTLRWLAGASMYEGMDGHVIARSTAYQTAFRVIKAINDCTELDCKWPATPEDVADKAAHFEKRCSVGVIRQCVGAMDGLFVRTIRPTTRDTAEPNSYYSGHKKGFGMNFQGICDAEYRIIAWTMNSPGCQNDRTAFKFSGFEQLLQDLPPDYFILGDAAYPASDRVLVPYPGTNLPTFHDAFNFWQSQGRISIEQTFGIMVRTWGILWRPMEFGLGRVVEVVGAVVRLHNFC 888
            RERR +  YIKPML D TF  RFRM + DF++LVDHLRP L+++     LRNGA+PVEYQV +TLRWLAG S+YE MDGHVIARSTAY     VI A+N C EL+CKWP   ED+ +  +       + V+R+CVGAMDGLFVR I+P+ ++ AEPN YY+GHKKGFGMNFQ +C                QNDRTAF FSGF++LL  LP  +F++G+AAY AS+RV+VP+PGT+ P                 EQT+GI+VR WGILWRPME  + +   VV AVVRLHNFC
Sbjct:   52 RERRPFETYIKPMLQDHTFSMRFRMEYDDFRVLVDHLRPALQQNEKTGLLRNGAIPVEYQVAMTLRWLAGGSIYEYMDGHVIARSTAYHVTSTVINALNACPELNCKWPEG-EDLPEPPSFSATAALMDVVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQ-VCS---------------QNDRTAFNFSGFDKLLAGLPEGHFVVGNAAYGASERVVVPFPGTSPPX----------------EQTYGILVRRWGILWRPMEVRIEKFEHVVNAVVRLHNFC 312          
BLAST of mRNA_P-littoralis_Contig1201.1.1 vs. uniprot
Match: A0A6H5KCG0_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCG0_9PHAE)

HSP 1 Score: 281 bits (719), Expect = 2.710e-90
Identity = 133/224 (59.38%), Postives = 160/224 (71.43%), Query Frame = 1
Query:  214 GASMYEGMDGHVIARSTAYQTAFRVIKAINDCTELDCKWPATPEDVADKAAHFEKRCSVGVIRQCVGAMDGLFVRTIRPTTRDTAEPNSYYSGHKKGFGMNFQGICDAEYRIIAWTMNSPGCQNDRTAFKFSGFEQLLQDLPPDYFILGDAAYPASDRVLVPYPGTNLPTFHDAFNFWQSQGRISIEQTFGIMVRTWGILWRPMEFGLGRVVEVVGAVVRLHNF 885
            G S++E MDG V A+STAY   +RVI AIN   E DC WP   +D  D+   + +R +  VI  CVGAMDGLFV    P+ R    P  +YSGHKKGFGMNFQ +C+A Y+I AWTMN PG  NDRTAFK SGFE++L+ LP   +I+GD AYPASD+VLVPYPGT L    D++NF+QSQ RI IEQ FG MV+TWGILWRP++  LGRV  V+ AVVRLHNF
Sbjct:   51 GGSIFEVMDGCVFAKSTAYAIVYRVIDAINQTREFDCVWPEG-DDALDQCGVYRQRSTNNVIHMCVGAMDGLFVLIFEPSLRRHVNPRGFYSGHKKGFGMNFQAVCNARYKITAWTMNCPGSCNDRTAFKHSGFERVLKTLPKGAYIVGDGAYPASDQVLVPYPGTTLTPSQDSYNFYQSQARIFIEQAFGNMVKTWGILWRPLQVKLGRVSSVMNAVVRLHNF 273          
BLAST of mRNA_P-littoralis_Contig1201.1.1 vs. uniprot
Match: A0A6H5JVS8_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS8_9PHAE)

HSP 1 Score: 254 bits (650), Expect = 4.170e-80
Identity = 133/284 (46.83%), Postives = 169/284 (59.51%), Query Frame = 1
Query:    7 RERRAWPLYIKPMLGDGTFKGRFRMHHVDFKILVDHLRPELERDTTMRALRNGAVPVEYQVGLTLRWLAGASMYEGMDGHVIARSTAYQTAFRVIKAINDCTELDCKWPATPEDVADKAAHFEKRCSVGVIRQCVGAMDGLFVRTIRPTTRDTAEPNSYYSGHKKGFGMNFQGICDAEYRIIAWTMNSPGCQNDRTAFKFSGFEQLLQDLPPDYFILGDAAYPASDRVLVPYPGTNLPTFHDAFNFWQSQGRISIEQTFGIMVRTWGILWRPMEFGLGRVVEVV 858
            RERR +  +IKP+L D TF  RFRM + DF++L+DHLRP L ++  M  LR GA+PVEYQ+ +TLRWLAG S+YE MDGHVIARSTAY     VI A+N C EL+CKWP    DV               +R+CVGAMDGLFVR I+P+ ++ AEPN YY+GH+KG                                                 ++GDAAY AS+RV+VP+PGT+L    DA N + SQ R++IEQT+GI+VR WGILWRPME  + +   VV
Sbjct:   52 RERRPFETHIKPLLQDHTFSVRFRMEYDDFRVLIDHLRPALHKNEKMGLLRIGAIPVEYQIAMTLRWLAGGSIYECMDGHVIARSTAYHVTSTVINALNACPELNCKWPEARMDV---------------VRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHRKGV------------------------------------------------VVGDAAYGASERVVVPFPGTSLSASQDACNNYVSQYRMAIEQTYGILVRRWGILWRPMEVRIEKFEHVV 272          
BLAST of mRNA_P-littoralis_Contig1201.1.1 vs. uniprot
Match: A0A6H5KNF2_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNF2_9PHAE)

HSP 1 Score: 241 bits (616), Expect = 6.280e-76
Identity = 107/167 (64.07%), Postives = 136/167 (81.44%), Query Frame = 1
Query:  388 VGVIRQCVGAMDGLFVRTIRPTTRDTAEPNSYYSGHKKGFGMNFQGICDAEYRIIAWTMNSPGCQNDRTAFKFSGFEQLLQDLPPDYFILGDAAYPASDRVLVPYPGTNLPTFHDAFNFWQSQGRISIEQTFGIMVRTWGILWRPMEFGLGRVVEVVGAVVRLHNFC 888
            V V+R+CVGAMDGLFVR I+P+ ++ AEPN YY+GHK GFGMNFQ +CDA+YRI+AWTM+ PG QNDRTAF F+ F++LL  LP  +F++GDAAY AS+RV+VP+PGT+L    DA N++ SQ R++IEQT+GI+VR WGILWRPME  + +   VV AVVRLHNFC
Sbjct:   15 VDVVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHKNGFGMNFQAVCDAQYRIVAWTMSCPGSQNDRTAFNFAWFDKLLAGLPEGHFVVGDAAYGASERVVVPFPGTSLSASQDACNYYVSQCRMAIEQTYGILVRRWGILWRPMEVRIEKFEHVVNAVVRLHNFC 181          
BLAST of mRNA_P-littoralis_Contig1201.1.1 vs. uniprot
Match: A0A6H5K540_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K540_9PHAE)

HSP 1 Score: 230 bits (586), Expect = 2.050e-70
Identity = 129/294 (43.88%), Postives = 158/294 (53.74%), Query Frame = 1
Query:    7 RERRAWPLYIKPMLGDGTFKGRFRMHHVDFKILVDHLRPELERDTTMRALRNGAVPVEYQVGLTLRWLAGASMYEGMDGHVIARSTAYQTAFRVIKAINDCTELDCKWPATPEDVADKAAHFEKRCSVGVIRQCVGAMDGLFVRTIRPTTRDTAEPNSYYSGHKKGFGMNFQGICDAEYRIIAWTMNSPGCQNDRTAFKFSGFEQLLQDLPPDYFILGDAAYPASDRVLVPYPGTNLPTFHDAFNFWQSQGRISIEQTFGIMVRTWGILWRPMEFGLGRVVEVVGAVVRLHNFC 888
            R RR +  YIKPML D TF  RFRM + DF++LVDHLRP L+++  M  LRNGA+PVEYQV +TLRWLAG S YE MDGHVIARSTAY                                                                                     +CDA+YRI+AW MN PG QNDRTAF FSGF++LL  LP  +F++GDAAY AS+RV+VP+PGT+L    DA N++ SQ R++IEQT+GI+V   G+    +E        VV AVVRLHNFC
Sbjct:   52 RVRRPFETYIKPMLQDHTFSMRFRMEYDDFRVLVDHLRPALQKNEKMGLLRNGAIPVEYQVAMTLRWLAGGSTYECMDGHVIARSTAYHA-----------------------------------------------------------------------------------VCDAQYRIMAWMMNCPGSQNDRTAFNFSGFDKLLAGLPEGHFVVGDAAYGASERVVVPFPGTSLSASQDACNYYMSQCRMAIEQTYGILVSVVGMAKVVVE-------HVVNAVVRLHNFC 255          
BLAST of mRNA_P-littoralis_Contig1201.1.1 vs. uniprot
Match: A0A6H5L386_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L386_9PHAE)

HSP 1 Score: 218 bits (555), Expect = 9.500e-65
Identity = 116/295 (39.32%), Postives = 170/295 (57.63%), Query Frame = 1
Query:   10 ERRAWPLYIKPMLGDGTFKGRFRMHHVDFKILVDHLRPELERDTTMRALR--NGAVPVEYQVGLTLRWLAGASMYEGMDGHVIARSTAYQTAFRVIKAINDCTELDCKW-PATPEDVADKAAHFEKRCSVGVIRQCVGAMDGLFVRTIRPTTRDTAEPNSYYSGHKKGFGMNFQGICDAEYRIIAWTMNSPGCQNDRTAFKFSGFEQLLQDLPPDYFILGDAAYPASDRVLVPYPGTNLPTFHDAFNFWQSQGRISIEQTFGIMVRTWGILWRPMEFGLGRVVEVVGAVVRLHNF 885
            +R  W  +   +     FK  +RM    F+ L + L P L  +     LR  NGA+ V+ ++ + LR LAGAS  +      +   T Y T + VI AIN   E+   + P T  D    AA F+++ + G+   CV  +DGLFV+T+ P+ +DTA   +YYSG K  +G+N Q +C A+YR  + +  +PG  ND  A+  S   + +  LP  +++LGDAAYP S+++L PYPG NLP   D+FNF  SQ R+ IEQ+FGI+V TWGILWRP++       +++ A+ RLHNF
Sbjct:   66 QRLDWDEHADDLEERDCFKRMYRMPRHAFEKLAELLAPLLTVNKHFAELRTLNGAISVQIRLAVALRILAGASYLDVAVMFGLGLPTVYATLWMVIDAINSTPEVGAFFFPQTEFDCRGHAARFKRKSTNGIFSFCVACVDGLFVKTLAPSPKDTANVIAYYSGQKCAYGINVQAMCTADYRFCSMSAITPGATNDWAAWLRSKLSRAVNRLPKGFYVLGDAAYPLSEQLLTPYPGKNLPLGEDSFNFHLSQLRVKIEQSFGILVGTWGILWRPLKVDFAGRTDLITALFRLHNF 360          
BLAST of mRNA_P-littoralis_Contig1201.1.1 vs. uniprot
Match: A0A6H5JV75_9PHAE (DDE Tnp4 domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV75_9PHAE)

HSP 1 Score: 209 bits (531), Expect = 7.280e-61
Identity = 110/295 (37.29%), Postives = 165/295 (55.93%), Query Frame = 1
Query:   10 ERRAWPLYIKPMLGDGTFKGRFRMHHVDFKILVDHLRPELERDT--TMRALRNGAVPVEYQVGLTLRWLAGASMYEGMDGHVIARSTAYQTAFRVIKAINDCTELD-CKWPATPEDVADKAAHFEKRCSVGVIRQCVGAMDGLFVRTIRPTTRDTAEPNSYYSGHKKGFGMNFQGICDAEYRIIAWTMNSPGCQNDRTAFKFSGFEQLLQDLPPDYFILGDAAYPASDRVLVPYPGTNLPTFHDAFNFWQSQGRISIEQTFGIMVRTWGILWRPMEFGLGRVVEVVGAVVRLHNF 885
             R  W  +   +      +  +RM    F  L   L P L+       +  R GAV  + ++ + LR +AGAS  +      +++ TA+   ++V+ AIN   E+    +P + ++   +AA +E++ + G  +  V A DGLFV+T+ PT  +T    SYYSG K G+G+N Q  CDA YR  + +  +PG  ND TA+  S     +++LPP +++LGDAAYP SD +L PYPG  LP   DAFNF+ SQ R+ IEQ FGI+V  WGILW+P+        +++ A+ RLHNF
Sbjct:   73 RRLVWEDHAADLKKRKLLRRMYRMEEPVFNKLAGLLEPILQLYDYYARKRYRRGAVSTKIRLAIGLRMMAGASYIDAAMLFGVSKETAFSILWQVVDAINSTAEVGPFFFPQSEDECTRQAAEWEEKSTGGAFQGVVAAGDGLFVKTLAPTALNTPNVLSYYSGSKCGYGVNVQATCDANYRFCSMSCIAPGSTNDWTAWNHSDLSTAVKNLPPGFYMLGDAAYPLSDHLLTPYPGRGLPLDKDAFNFYLSQLRVRIEQAFGILVGQWGILWKPLRVQFAGRCDLITALFRLHNF 367          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1201.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K3F2_9PHAE2.130e-13062.80DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5K6M2_9PHAE1.340e-12561.43DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5L6B6_9PHAE2.390e-11963.50DDE Tnp4 domain-containing protein n=3 Tax=Ectocar... [more]
A0A6H5JJA1_9PHAE6.320e-10755.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KCG0_9PHAE2.710e-9059.38DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JVS8_9PHAE4.170e-8046.83DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KNF2_9PHAE6.280e-7664.07DDE Tnp4 domain-containing protein n=2 Tax=Ectocar... [more]
A0A6H5K540_9PHAE2.050e-7043.88DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5L386_9PHAE9.500e-6539.32DDE Tnp4 domain-containing protein (Fragment) n=1 ... [more]
A0A6H5JV75_9PHAE7.280e-6137.29DDE Tnp4 domain-containing protein n=4 Tax=Ectocar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1201contigP-littoralis_Contig1201:2721..4562 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog4792.ETI53028
PFAMsDDE_Tnp_4
Model size888
Max annot lvl4776|Peronosporales
Hectar predicted targeting categorymitochondrion
Exons3
Evalue4.03e-44
EggNOG OGsKOG4585@1|root,KOG4585@2759|Eukaryota,3QI3U@4776|Peronosporales
Descriptionnuclease activity
Cds size888
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789516.1656296-CDS-P-littoralis_Contig1201:2720..32421680789516.1656296-CDS-P-littoralis_Contig1201:2720..3242Pylaiella littoralis U1_48CDSP-littoralis_Contig1201 2721..3242 +
1680789516.1777074-CDS-P-littoralis_Contig1201:3647..39171680789516.1777074-CDS-P-littoralis_Contig1201:3647..3917Pylaiella littoralis U1_48CDSP-littoralis_Contig1201 3648..3917 +
1680789516.188113-CDS-P-littoralis_Contig1201:4466..45621680789516.188113-CDS-P-littoralis_Contig1201:4466..4562Pylaiella littoralis U1_48CDSP-littoralis_Contig1201 4467..4562 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1201.1.1prot_P-littoralis_Contig1201.1.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1201 2721..4562 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1201.1.1

>prot_P-littoralis_Contig1201.1.1 ID=prot_P-littoralis_Contig1201.1.1|Name=mRNA_P-littoralis_Contig1201.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=296bp
LLRERRAWPLYIKPMLGDGTFKGRFRMHHVDFKILVDHLRPELERDTTMR
ALRNGAVPVEYQVGLTLRWLAGASMYEGMDGHVIARSTAYQTAFRVIKAI
NDCTELDCKWPATPEDVADKAAHFEKRCSVGVIRQCVGAMDGLFVRTIRP
TTRDTAEPNSYYSGHKKGFGMNFQGICDAEYRIIAWTMNSPGCQNDRTAF
KFSGFEQLLQDLPPDYFILGDAAYPASDRVLVPYPGTNLPTFHDAFNFWQ
SQGRISIEQTFGIMVRTWGILWRPMEFGLGRVVEVVGAVVRLHNFC
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mRNA from alignment at P-littoralis_Contig1201:2721..4562+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1201.1.1 ID=mRNA_P-littoralis_Contig1201.1.1|Name=mRNA_P-littoralis_Contig1201.1.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1842bp|location=Sequence derived from alignment at P-littoralis_Contig1201:2721..4562+ (Pylaiella littoralis U1_48)
TTGCTGCGAGAAAGGCGAGCGTGGCCTCTTTACATCAAGCCCATGCTAGG AGACGGGACCTTCAAGGGGCGCTTCCGCATGCACCATGTCGACTTCAAGA TCCTGGTTGATCATCTTCGGCCGGAGCTGGAGAGAGACACTACGATGAGA GCCCTCCGGAACGGCGCCGTTCCGGTCGAGTATCAGGTCGGTTTGACCCT GCGCTGGTTGGCTGGTGCGTCCATGTACGAAGGCATGGACGGGCATGTCA TCGCTAGGAGTACCGCATACCAGACAGCTTTTCGCGTTATCAAGGCCATC AACGACTGTACTGAGCTGGACTGCAAGTGGCCCGCCACGCCGGAGGACGT CGCCGACAAGGCCGCTCACTTCGAGAAACGCTGCTCAGTCGGTGTTATCC GACAATGCGTCGGGGCCATGGACGGGCTCTTTGTCCGCACCATCAGACCG ACCACCAGAGATACAGCCGAACCGAACAGCTACTACAGCGGTCACAAGAA GGGATTCGGCATGAACTTTCAGGTACACACTACGAAATCTGAAGTAGAAG GGCGTCTTCTGTTTTCATGTACCCACCTCTCTCTCTCTCTCTACAATAAA TATGGCATTGATCTCATAAAAACAAAGGGATCCGTATTTGATGCTCTGGT GCACTCTGCTAGTACAGCAGTACATTTACGTATGCACTACTGCTGTAATG TGCATGACACACCTTAACAACTACAACTGCTGCAGCCCCTTCCGAATACG GACATGCCGCCTGACAAAAGAGAACATGCATGTATGACAAAATTTGCAAA TGCGGTGATAAGGCCATGTGGTAACCGCGGATGGCTGAAGTGCACATCGA TCCGCTGTCCTACTCGATGTGAGTATGTGTCCCCAAAACTGAACTGTTCG CGAACTCTTGCCCTCTCACTTATACAGGGGATCTGCGACGCGGAGTACAG GATCATCGCATGGACCATGAACAGTCCCGGGTGCCAAAATGACCGCACGG CCTTCAAGTTTTCCGGGTTCGAACAGCTCCTCCAGGACTTGCCCCCGGAC TACTTCATCCTGGGCGACGCGGCGTACCCCGCTTCCGACCGCGTCCTGGT CCCGTACCCCGGGACAAACCTGCCAACGTTCCACGACGCCTTCAACTTCT GGCAGTCTCAGGGGCGGATCTCCATCGAGCAGACCTTCGGCATAATGGTG AGTGCTCAACGCTTCAGCTGCTGGACTTCCAAATGACGACCATTCGGGGA CACCTATTTTGTGTAGCTGAGCTTGTTTGTGTGCGATCTCGAGGTATCTT GCGTGTCGACGATTTCGCCCATTTCTCTTTGATTTTCCCGCCGCGCGCGG TCCAGCACTGACTGTCAGCTAAAGTACAAGTTTTTATCGTGGGCTGCTGC GATTCAAAAAATTTCACCGTTTGAAAGTCATGCGGGTAGCCTTGGTCCCC GCTTGCTGGTGGTCCTCACTGCTGCTGTGCTGTTTCGGGAGATTAGGACA GCTCCCAGTGTAGGACCAAGTCGCAATTTTGTTCGAGCGGCAGGGTAAGC GAGACGCGTGTTTTATTTTTTAGAGCTGTGCGATTGGGGTCGATCACAGC TGTGAGCACACACTTTCGACGAGCAAACTTCGCGATTTTCTCTTTTGTCT GCTTATTTCAATTGTCTCTTTTCCTGCCAAGTAGTCGGAGACCATCCAAC ACCCACACCCGACGCCGTTCTTTCCCTGTGCTTGATATTTAAAAAGGTCC GGACGTGGGGAATCCTTTGGCGCCCCATGGAGTTTGGGCTGGGGCGGGTT GTTGAAGTGGTGGGGGCCGTCGTTCGCCTGCACAACTTCTGC
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Coding sequence (CDS) from alignment at P-littoralis_Contig1201:2721..4562+

>mRNA_P-littoralis_Contig1201.1.1 ID=mRNA_P-littoralis_Contig1201.1.1|Name=mRNA_P-littoralis_Contig1201.1.1|organism=Pylaiella littoralis U1_48|type=CDS|length=888bp|location=Sequence derived from alignment at P-littoralis_Contig1201:2721..4562+ (Pylaiella littoralis U1_48)
TTGCTGCGAGAAAGGCGAGCGTGGCCTCTTTACATCAAGCCCATGCTAGG
AGACGGGACCTTCAAGGGGCGCTTCCGCATGCACCATGTCGACTTCAAGA
TCCTGGTTGATCATCTTCGGCCGGAGCTGGAGAGAGACACTACGATGAGA
GCCCTCCGGAACGGCGCCGTTCCGGTCGAGTATCAGGTCGGTTTGACCCT
GCGCTGGTTGGCTGGTGCGTCCATGTACGAAGGCATGGACGGGCATGTCA
TCGCTAGGAGTACCGCATACCAGACAGCTTTTCGCGTTATCAAGGCCATC
AACGACTGTACTGAGCTGGACTGCAAGTGGCCCGCCACGCCGGAGGACGT
CGCCGACAAGGCCGCTCACTTCGAGAAACGCTGCTCAGTCGGTGTTATCC
GACAATGCGTCGGGGCCATGGACGGGCTCTTTGTCCGCACCATCAGACCG
ACCACCAGAGATACAGCCGAACCGAACAGCTACTACAGCGGTCACAAGAA
GGGATTCGGCATGAACTTTCAGGGGATCTGCGACGCGGAGTACAGGATCA
TCGCATGGACCATGAACAGTCCCGGGTGCCAAAATGACCGCACGGCCTTC
AAGTTTTCCGGGTTCGAACAGCTCCTCCAGGACTTGCCCCCGGACTACTT
CATCCTGGGCGACGCGGCGTACCCCGCTTCCGACCGCGTCCTGGTCCCGT
ACCCCGGGACAAACCTGCCAACGTTCCACGACGCCTTCAACTTCTGGCAG
TCTCAGGGGCGGATCTCCATCGAGCAGACCTTCGGCATAATGGTCCGGAC
GTGGGGAATCCTTTGGCGCCCCATGGAGTTTGGGCTGGGGCGGGTTGTTG
AAGTGGTGGGGGCCGTCGTTCGCCTGCACAACTTCTGC
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