mRNA_P-littoralis_Contig1201.1.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1201.1.1 vs. uniprot
Match: A0A6H5K3F2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3F2_9PHAE) HSP 1 Score: 385 bits (990), Expect = 2.130e-130 Identity = 184/293 (62.80%), Postives = 222/293 (75.77%), Query Frame = 1
Query: 7 RERRAWPLYIKPMLGDGTFKGRFRMHHVDFKILVDHLRPELERDTTMRALRNGAVPVEYQVGLTLRWLAGASMYEGMDGHVIARSTAYQTAFRVIKAINDCTELDCKWPATPEDVADKAAHFEKRCSVGVIRQCVGAMDGLFVRTIRPTTRDTAEPNSYYSGHKKGFGMNFQGICDAEYRIIAWTMNSPGCQNDRTAFKFSGFEQLLQDLPPDYFILGDAAYPASDRVLVPYPGTNLPTFHDAFNFWQSQGRISIEQTFGIMVRTWGILWRPMEFGLGRVVEVVGAVVRLHNF 885
RERR+W Y KPM+ DGTF+ RFRM + +F +L D LRP+LER+ M ALRNG +PVE+Q+ + LR+LAG S++E MDG+VIARSTAY RVI AIN ELDC WP ED D+ + +R + GVIR CVGAMDGLFVR +P+ R P S+YSGHKKGFGMNFQG+C+A Y IIAWTMN PG NDRTAFK S F +L+ LPP +I+GDAAYPASD+VLVPYPGT+L DA+NF+QSQ RISIEQ FGIMV+TWGILWRP++ L RV V+ +VVRLHNF
Sbjct: 48 RERRSWYTYAKPMVQDGTFRLRFRMDYTEFALLADMLRPKLERNERMGALRNGVIPVEFQLAMALRFLAGGSVFEVMDGNVIARSTAYAIVHRVIDAINQTRELDCVWPEG-EDALDQCGMYRRRSTNGVIRMCVGAMDGLFVRMTQPSLRRHVNPRSFYSGHKKGFGMNFQGVCNARYEIIAWTMNCPGSCNDRTAFKHSVFGTVLKTLPPGAYIVGDAAYPASDQVLVPYPGTSLTRSQDAYNFYQSQARISIEQAFGIMVKTWGILWRPLDMRLERVSSVINSVVRLHNF 339
BLAST of mRNA_P-littoralis_Contig1201.1.1 vs. uniprot
Match: A0A6H5K6M2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6M2_9PHAE) HSP 1 Score: 374 bits (959), Expect = 1.340e-125 Identity = 180/293 (61.43%), Postives = 221/293 (75.43%), Query Frame = 1
Query: 7 RERRAWPLYIKPMLGDGTFKGRFRMHHVDFKILVDHLRPELERDTTMRALRNGAVPVEYQVGLTLRWLAGASMYEGMDGHVIARSTAYQTAFRVIKAINDCTELDCKWPATPEDVADKAAHFEKRCSVGVIRQCVGAMDGLFVRTIRPTTRDTAEPNSYYSGHKKGFGMNFQGICDAEYRIIAWTMNSPGCQNDRTAFKFSGFEQLLQDLPPDYFILGDAAYPASDRVLVPYPGTNLPTFHDAFNFWQSQGRISIEQTFGIMVRTWGILWRPMEFGLGRVVEVVGAVVRLHNF 885
RERR++ Y++PM+ D TF+ RFRM + DF L D LRP+L+RD M ALRNGA+PVE+Q+ +TLR+LAG S++E MD +VIA+STAY RVI AIN +L+CKWP +D +A + +R + GVIR+CVGAMDGLFVR I P + A P S+YSGHKK FGMNFQGIC+A Y II WTMN PG QNDRTAFK SGF+ LL +PPD FI+GDAAYPAS+RVLVP PGT L DA+NF+QSQ RISIEQ FGI+V+TW ILW+P+ L RV V+ A+VRLHNF
Sbjct: 52 RERRSFYTYVRPMVEDNTFRKRFRMDYTDFMTLADILRPKLQRDEKMGALRNGAIPVEFQLAMTLRFLAGGSVFEVMDSNVIAKSTAYAIVHRVIDAINQTRQLNCKWPYG-DDAEAQAELYRRRSTNGVIRRCVGAMDGLFVRLIPPCLKRHAVPGSFYSGHKKAFGMNFQGICNASYEIITWTMNCPGSQNDRTAFKHSGFDALLSKMPPDCFIVGDAAYPASNRVLVPDPGTALTLSQDAYNFYQSQARISIEQAFGILVKTWEILWKPLAIRLDRVGHVMNAIVRLHNF 343
BLAST of mRNA_P-littoralis_Contig1201.1.1 vs. uniprot
Match: A0A6H5L6B6_9PHAE (DDE Tnp4 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6B6_9PHAE) HSP 1 Score: 357 bits (917), Expect = 2.390e-119 Identity = 167/263 (63.50%), Postives = 204/263 (77.57%), Query Frame = 1
Query: 100 ILVDHLRPELERDTTMRALRNGAVPVEYQVGLTLRWLAGASMYEGMDGHVIARSTAYQTAFRVIKAINDCTELDCKWPATPEDVADKAAHFEKRCSVGVIRQCVGAMDGLFVRTIRPTTRDTAEPNSYYSGHKKGFGMNFQGICDAEYRIIAWTMNSPGCQNDRTAFKFSGFEQLLQDLPPDYFILGDAAYPASDRVLVPYPGTNLPTFHDAFNFWQSQGRISIEQTFGIMVRTWGILWRPMEFGLGRVVEVVGAVVRLHNFC 888
+LVDHLRP L+++ M LRNGA+PVE QV +TLRWLAG S+YE MDGHVIARSTAY VI A+N C EL+CKWP ED A A F R S+ V+R+CVGA DGLFVR I+P+ ++ AEPN YY+GHKKGFGMNFQ +CDA+YRI+AW MN PG QNDRTAF FSGF++LL LP +F++GDAAY AS+RV+VP+PGT+L DA N++ SQ R++IEQT+GI+VR WGILWRPME + + VV AVVRLHNFC
Sbjct: 72 VLVDHLRPALQKNQQMGLLRNGAIPVEDQVAMTLRWLAGGSIYECMDGHVIARSTAYHVTSTVINALNACPELNCKWPEG-EDAARAAELFRNRSSMDVVRKCVGATDGLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQAVCDAQYRIMAWMMNCPGSQNDRTAFNFSGFDKLLAGLPEGHFVVGDAAYGASERVVVPFPGTSLSASQDACNYYVSQCRMAIEQTYGILVRRWGILWRPMEVRIEKFEHVVNAVVRLHNFC 333
BLAST of mRNA_P-littoralis_Contig1201.1.1 vs. uniprot
Match: A0A6H5JJA1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJA1_9PHAE) HSP 1 Score: 325 bits (833), Expect = 6.320e-107 Identity = 163/294 (55.44%), Postives = 201/294 (68.37%), Query Frame = 1
Query: 7 RERRAWPLYIKPMLGDGTFKGRFRMHHVDFKILVDHLRPELERDTTMRALRNGAVPVEYQVGLTLRWLAGASMYEGMDGHVIARSTAYQTAFRVIKAINDCTELDCKWPATPEDVADKAAHFEKRCSVGVIRQCVGAMDGLFVRTIRPTTRDTAEPNSYYSGHKKGFGMNFQGICDAEYRIIAWTMNSPGCQNDRTAFKFSGFEQLLQDLPPDYFILGDAAYPASDRVLVPYPGTNLPTFHDAFNFWQSQGRISIEQTFGIMVRTWGILWRPMEFGLGRVVEVVGAVVRLHNFC 888
RERR + YIKPML D TF RFRM + DF++LVDHLRP L+++ LRNGA+PVEYQV +TLRWLAG S+YE MDGHVIARSTAY VI A+N C EL+CKWP ED+ + + + V+R+CVGAMDGLFVR I+P+ ++ AEPN YY+GHKKGFGMNFQ +C QNDRTAF FSGF++LL LP +F++G+AAY AS+RV+VP+PGT+ P EQT+GI+VR WGILWRPME + + VV AVVRLHNFC
Sbjct: 52 RERRPFETYIKPMLQDHTFSMRFRMEYDDFRVLVDHLRPALQQNEKTGLLRNGAIPVEYQVAMTLRWLAGGSIYEYMDGHVIARSTAYHVTSTVINALNACPELNCKWPEG-EDLPEPPSFSATAALMDVVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQ-VCS---------------QNDRTAFNFSGFDKLLAGLPEGHFVVGNAAYGASERVVVPFPGTSPPX----------------EQTYGILVRRWGILWRPMEVRIEKFEHVVNAVVRLHNFC 312
BLAST of mRNA_P-littoralis_Contig1201.1.1 vs. uniprot
Match: A0A6H5KCG0_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCG0_9PHAE) HSP 1 Score: 281 bits (719), Expect = 2.710e-90 Identity = 133/224 (59.38%), Postives = 160/224 (71.43%), Query Frame = 1
Query: 214 GASMYEGMDGHVIARSTAYQTAFRVIKAINDCTELDCKWPATPEDVADKAAHFEKRCSVGVIRQCVGAMDGLFVRTIRPTTRDTAEPNSYYSGHKKGFGMNFQGICDAEYRIIAWTMNSPGCQNDRTAFKFSGFEQLLQDLPPDYFILGDAAYPASDRVLVPYPGTNLPTFHDAFNFWQSQGRISIEQTFGIMVRTWGILWRPMEFGLGRVVEVVGAVVRLHNF 885
G S++E MDG V A+STAY +RVI AIN E DC WP +D D+ + +R + VI CVGAMDGLFV P+ R P +YSGHKKGFGMNFQ +C+A Y+I AWTMN PG NDRTAFK SGFE++L+ LP +I+GD AYPASD+VLVPYPGT L D++NF+QSQ RI IEQ FG MV+TWGILWRP++ LGRV V+ AVVRLHNF
Sbjct: 51 GGSIFEVMDGCVFAKSTAYAIVYRVIDAINQTREFDCVWPEG-DDALDQCGVYRQRSTNNVIHMCVGAMDGLFVLIFEPSLRRHVNPRGFYSGHKKGFGMNFQAVCNARYKITAWTMNCPGSCNDRTAFKHSGFERVLKTLPKGAYIVGDGAYPASDQVLVPYPGTTLTPSQDSYNFYQSQARIFIEQAFGNMVKTWGILWRPLQVKLGRVSSVMNAVVRLHNF 273
BLAST of mRNA_P-littoralis_Contig1201.1.1 vs. uniprot
Match: A0A6H5JVS8_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS8_9PHAE) HSP 1 Score: 254 bits (650), Expect = 4.170e-80 Identity = 133/284 (46.83%), Postives = 169/284 (59.51%), Query Frame = 1
Query: 7 RERRAWPLYIKPMLGDGTFKGRFRMHHVDFKILVDHLRPELERDTTMRALRNGAVPVEYQVGLTLRWLAGASMYEGMDGHVIARSTAYQTAFRVIKAINDCTELDCKWPATPEDVADKAAHFEKRCSVGVIRQCVGAMDGLFVRTIRPTTRDTAEPNSYYSGHKKGFGMNFQGICDAEYRIIAWTMNSPGCQNDRTAFKFSGFEQLLQDLPPDYFILGDAAYPASDRVLVPYPGTNLPTFHDAFNFWQSQGRISIEQTFGIMVRTWGILWRPMEFGLGRVVEVV 858
RERR + +IKP+L D TF RFRM + DF++L+DHLRP L ++ M LR GA+PVEYQ+ +TLRWLAG S+YE MDGHVIARSTAY VI A+N C EL+CKWP DV +R+CVGAMDGLFVR I+P+ ++ AEPN YY+GH+KG ++GDAAY AS+RV+VP+PGT+L DA N + SQ R++IEQT+GI+VR WGILWRPME + + VV
Sbjct: 52 RERRPFETHIKPLLQDHTFSVRFRMEYDDFRVLIDHLRPALHKNEKMGLLRIGAIPVEYQIAMTLRWLAGGSIYECMDGHVIARSTAYHVTSTVINALNACPELNCKWPEARMDV---------------VRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHRKGV------------------------------------------------VVGDAAYGASERVVVPFPGTSLSASQDACNNYVSQYRMAIEQTYGILVRRWGILWRPMEVRIEKFEHVV 272
BLAST of mRNA_P-littoralis_Contig1201.1.1 vs. uniprot
Match: A0A6H5KNF2_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNF2_9PHAE) HSP 1 Score: 241 bits (616), Expect = 6.280e-76 Identity = 107/167 (64.07%), Postives = 136/167 (81.44%), Query Frame = 1
Query: 388 VGVIRQCVGAMDGLFVRTIRPTTRDTAEPNSYYSGHKKGFGMNFQGICDAEYRIIAWTMNSPGCQNDRTAFKFSGFEQLLQDLPPDYFILGDAAYPASDRVLVPYPGTNLPTFHDAFNFWQSQGRISIEQTFGIMVRTWGILWRPMEFGLGRVVEVVGAVVRLHNFC 888
V V+R+CVGAMDGLFVR I+P+ ++ AEPN YY+GHK GFGMNFQ +CDA+YRI+AWTM+ PG QNDRTAF F+ F++LL LP +F++GDAAY AS+RV+VP+PGT+L DA N++ SQ R++IEQT+GI+VR WGILWRPME + + VV AVVRLHNFC
Sbjct: 15 VDVVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHKNGFGMNFQAVCDAQYRIVAWTMSCPGSQNDRTAFNFAWFDKLLAGLPEGHFVVGDAAYGASERVVVPFPGTSLSASQDACNYYVSQCRMAIEQTYGILVRRWGILWRPMEVRIEKFEHVVNAVVRLHNFC 181
BLAST of mRNA_P-littoralis_Contig1201.1.1 vs. uniprot
Match: A0A6H5K540_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K540_9PHAE) HSP 1 Score: 230 bits (586), Expect = 2.050e-70 Identity = 129/294 (43.88%), Postives = 158/294 (53.74%), Query Frame = 1
Query: 7 RERRAWPLYIKPMLGDGTFKGRFRMHHVDFKILVDHLRPELERDTTMRALRNGAVPVEYQVGLTLRWLAGASMYEGMDGHVIARSTAYQTAFRVIKAINDCTELDCKWPATPEDVADKAAHFEKRCSVGVIRQCVGAMDGLFVRTIRPTTRDTAEPNSYYSGHKKGFGMNFQGICDAEYRIIAWTMNSPGCQNDRTAFKFSGFEQLLQDLPPDYFILGDAAYPASDRVLVPYPGTNLPTFHDAFNFWQSQGRISIEQTFGIMVRTWGILWRPMEFGLGRVVEVVGAVVRLHNFC 888
R RR + YIKPML D TF RFRM + DF++LVDHLRP L+++ M LRNGA+PVEYQV +TLRWLAG S YE MDGHVIARSTAY +CDA+YRI+AW MN PG QNDRTAF FSGF++LL LP +F++GDAAY AS+RV+VP+PGT+L DA N++ SQ R++IEQT+GI+V G+ +E VV AVVRLHNFC
Sbjct: 52 RVRRPFETYIKPMLQDHTFSMRFRMEYDDFRVLVDHLRPALQKNEKMGLLRNGAIPVEYQVAMTLRWLAGGSTYECMDGHVIARSTAYHA-----------------------------------------------------------------------------------VCDAQYRIMAWMMNCPGSQNDRTAFNFSGFDKLLAGLPEGHFVVGDAAYGASERVVVPFPGTSLSASQDACNYYMSQCRMAIEQTYGILVSVVGMAKVVVE-------HVVNAVVRLHNFC 255
BLAST of mRNA_P-littoralis_Contig1201.1.1 vs. uniprot
Match: A0A6H5L386_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L386_9PHAE) HSP 1 Score: 218 bits (555), Expect = 9.500e-65 Identity = 116/295 (39.32%), Postives = 170/295 (57.63%), Query Frame = 1
Query: 10 ERRAWPLYIKPMLGDGTFKGRFRMHHVDFKILVDHLRPELERDTTMRALR--NGAVPVEYQVGLTLRWLAGASMYEGMDGHVIARSTAYQTAFRVIKAINDCTELDCKW-PATPEDVADKAAHFEKRCSVGVIRQCVGAMDGLFVRTIRPTTRDTAEPNSYYSGHKKGFGMNFQGICDAEYRIIAWTMNSPGCQNDRTAFKFSGFEQLLQDLPPDYFILGDAAYPASDRVLVPYPGTNLPTFHDAFNFWQSQGRISIEQTFGIMVRTWGILWRPMEFGLGRVVEVVGAVVRLHNF 885
+R W + + FK +RM F+ L + L P L + LR NGA+ V+ ++ + LR LAGAS + + T Y T + VI AIN E+ + P T D AA F+++ + G+ CV +DGLFV+T+ P+ +DTA +YYSG K +G+N Q +C A+YR + + +PG ND A+ S + + LP +++LGDAAYP S+++L PYPG NLP D+FNF SQ R+ IEQ+FGI+V TWGILWRP++ +++ A+ RLHNF
Sbjct: 66 QRLDWDEHADDLEERDCFKRMYRMPRHAFEKLAELLAPLLTVNKHFAELRTLNGAISVQIRLAVALRILAGASYLDVAVMFGLGLPTVYATLWMVIDAINSTPEVGAFFFPQTEFDCRGHAARFKRKSTNGIFSFCVACVDGLFVKTLAPSPKDTANVIAYYSGQKCAYGINVQAMCTADYRFCSMSAITPGATNDWAAWLRSKLSRAVNRLPKGFYVLGDAAYPLSEQLLTPYPGKNLPLGEDSFNFHLSQLRVKIEQSFGILVGTWGILWRPLKVDFAGRTDLITALFRLHNF 360
BLAST of mRNA_P-littoralis_Contig1201.1.1 vs. uniprot
Match: A0A6H5JV75_9PHAE (DDE Tnp4 domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV75_9PHAE) HSP 1 Score: 209 bits (531), Expect = 7.280e-61 Identity = 110/295 (37.29%), Postives = 165/295 (55.93%), Query Frame = 1
Query: 10 ERRAWPLYIKPMLGDGTFKGRFRMHHVDFKILVDHLRPELERDT--TMRALRNGAVPVEYQVGLTLRWLAGASMYEGMDGHVIARSTAYQTAFRVIKAINDCTELD-CKWPATPEDVADKAAHFEKRCSVGVIRQCVGAMDGLFVRTIRPTTRDTAEPNSYYSGHKKGFGMNFQGICDAEYRIIAWTMNSPGCQNDRTAFKFSGFEQLLQDLPPDYFILGDAAYPASDRVLVPYPGTNLPTFHDAFNFWQSQGRISIEQTFGIMVRTWGILWRPMEFGLGRVVEVVGAVVRLHNF 885
R W + + + +RM F L L P L+ + R GAV + ++ + LR +AGAS + +++ TA+ ++V+ AIN E+ +P + ++ +AA +E++ + G + V A DGLFV+T+ PT +T SYYSG K G+G+N Q CDA YR + + +PG ND TA+ S +++LPP +++LGDAAYP SD +L PYPG LP DAFNF+ SQ R+ IEQ FGI+V WGILW+P+ +++ A+ RLHNF
Sbjct: 73 RRLVWEDHAADLKKRKLLRRMYRMEEPVFNKLAGLLEPILQLYDYYARKRYRRGAVSTKIRLAIGLRMMAGASYIDAAMLFGVSKETAFSILWQVVDAINSTAEVGPFFFPQSEDECTRQAAEWEEKSTGGAFQGVVAAGDGLFVKTLAPTALNTPNVLSYYSGSKCGYGVNVQATCDANYRFCSMSCIAPGSTNDWTAWNHSDLSTAVKNLPPGFYMLGDAAYPLSDHLLTPYPGRGLPLDKDAFNFYLSQLRVRIEQAFGILVGQWGILWKPLRVQFAGRCDLITALFRLHNF 367 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1201.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1201.1.1 >prot_P-littoralis_Contig1201.1.1 ID=prot_P-littoralis_Contig1201.1.1|Name=mRNA_P-littoralis_Contig1201.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=296bp LLRERRAWPLYIKPMLGDGTFKGRFRMHHVDFKILVDHLRPELERDTTMRback to top mRNA from alignment at P-littoralis_Contig1201:2721..4562+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1201.1.1 ID=mRNA_P-littoralis_Contig1201.1.1|Name=mRNA_P-littoralis_Contig1201.1.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1842bp|location=Sequence derived from alignment at P-littoralis_Contig1201:2721..4562+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1201:2721..4562+ >mRNA_P-littoralis_Contig1201.1.1 ID=mRNA_P-littoralis_Contig1201.1.1|Name=mRNA_P-littoralis_Contig1201.1.1|organism=Pylaiella littoralis U1_48|type=CDS|length=888bp|location=Sequence derived from alignment at P-littoralis_Contig1201:2721..4562+ (Pylaiella littoralis U1_48)back to top |