mRNA_P-littoralis_Contig12.68.4 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig12.68.4 vs. uniprot
Match: D7G722_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G722_ECTSI) HSP 1 Score: 811 bits (2096), Expect = 3.820e-256 Identity = 447/711 (62.87%), Postives = 517/711 (72.71%), Query Frame = 2
Query: 194 MQSAPPSGGQGQGXXXXXXXXXXXTTVERLEHVRTLLAQKKPWPAFLGVAARGENAWKACPSPVQEALAWMATAGVEVLDTASVGPLKPVCQAFKALIEAAQGAARNEQTLQRLVSWCAFLTTVLIQHGQAVGPLAHVQKPIDDFVATTNQLAAFAAKLAKGSKCRALCCHRIDLAALTDYEEDLRRISNDIALVDGIAHRQETKALARDLRPPELPDMAAVPAGAPPEPHN-FVKRPALQEAVDYLVNPDEALAPYTVVGIGGGGKTVLVSAVVRNSSVRERFRGGIFWIGVGRGAKNSLLPLLQGLAREMGTTATDAPHKVSHVFDSLDQVKLHLSAAAASEGTLPRLVVLDDVWEREVVDTLLSLKLKLLVTTRDRSIGGGPESCLELGGMTDNEALELLLKTSETKHQPGNDVKAPMTKVVALSGRLPLVLAIAGSMAAVKGKGLTAGAWEELIAEFESSAAKMEACGEQLNSVNLVMETSFNALSNRRKTNFKKMAVLAAGATAPIEMLLNLWETEDVKGARDEAEGLASKCLLQHMGGDRYRVHDLLLEFATIKLKADVEMAKKAAALQARHLGRLDVVEGYEDPEHGAGDQGLFFLDALWRSVEKLSGNPKLEVSSYRASLAELESGGATADVADSYSSVGKLFHIQVGLCYPVCIHLLRRARSVEDRASKSWRKCTSEITPWLPSTHICITVSLDNRAGLFVR 2323
MQ AP SGGQ TTVERL+HV LLA+KKPWPAFL + AR W+ACP+PVQEALAWM T+ V VL ASVGPL PVC+AFKALIEAA+GAA + LQ LVS CAFL TVLIQHG+AVGPLA VQKPI DFV TTN+LA FAA+ AKG KCRA CCHR DL+AL +EE LRRI +DIALVDG+ H Q A L PP LPDMAAVP GA P + +V+R A+QE D L P+E+ APYTVVG+GGGGK+VL SA VR SVRE FRGGIFW+ VGRGAK+SLL LLQGLA ++G TDAPH V HV D L+QV+ HL AA AS GT PRLVVLDDVWEREVVD + L K+L+TTRDRS+ G P LELG MT+ EALELL KTS T QPG+DV+ MTKVVAL G LPLVLAIAGSM+ V+GKGLTA AWEEL E E+ A KM A GEQ +S+ +V+ETSF++L+ R++ F KMAVLAAGA APIEML NLWE ED +G RD+AEGL SKCLL +GG YRVHDL+LEFA ++A+ E KKA ALQA++LGRLDV+EGY DPEHGAG QGLFFLDALWRSVEKLSG+P+LEV+SY SL ELES AT VA SY SVG LF+IQ Y L R+ +++++ L H + SLDNRA L R
Sbjct: 44 MQRAPASGGQA---GLAAAAVVEPTTVERLDHVGKLLAEKKPWPAFLHIGARATEEWEACPTPVQEALAWMTTSAVGVLGVASVGPLVPVCEAFKALIEAAEGAAECQDKLQSLVSQCAFLATVLIQHGRAVGPLAQVQKPIQDFVVTTNELAGFAARWAKGGKCRAFCCHRPDLSALAGFEECLRRIGSDIALVDGLEHHQSFLAALPSLLPPSLPDMAAVPTGALELPSSSYVERAAVQEVADGLTTPEESRAPYTVVGMGGGGKSVLASAAVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLAWDVGAAPTDAPHGVPHVLDRLEQVQQHL-AAVASTGTSPRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGLPAGRLELGDMTEEEALELLRKTSGTVGQPGDDVRTKMTKVVALCGHLPLVLAIAGSMSVVRGKGLTAVAWEELAKELENVAKKMRARGEQSSSMKVVLETSFDSLAVRKQEEFLKMAVLAAGALAPIEMLRNLWEVEDAEGTRDDAEGLVSKCLLHAVGGGGYRVHDLVLEFAKTSIRAEEETVKKATALQAQYLGRLDVLEGYGDPEHGAGGQGLFFLDALWRSVEKLSGDPELEVASYHNSLGELESCEATKAVARSYWSVGFLFNIQGK--YAEAEPLYERSLAIQEKV--------------LGPEHPDVATSLDNRASLLER 734
BLAST of mRNA_P-littoralis_Contig12.68.4 vs. uniprot
Match: D7G720_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G720_ECTSI) HSP 1 Score: 797 bits (2058), Expect = 3.740e-247 Identity = 436/675 (64.59%), Postives = 505/675 (74.81%), Query Frame = 2
Query: 194 MQSAPPSGGQGQGXXXXXXXXXXXTTVERLEHVRTLLAQKKPWPAFLGVAARGENAWKACPSPVQEALAWMATAGVEVLDTASVGPLKPVCQAFKALIEAAQGAARNEQTLQRLVSWCAFLTTVLIQHGQAVGPLAHVQKPIDDFVATTNQLAAFAAKLAKGSKCRALCCHRIDLAALTDYEEDLRRISNDIALVDGIAHRQETKALARDLRPPELPDMAAVPAGAPPEPHN-FVKRPALQEAVDYLVNPDEALAPYTVVGIGGGGKTVLVSAVVRNSSVRERFRGGIFWIGVGRGAKNSLLPLLQGLAREMGTTATDAPHKVSHVFDSLDQVKLHLSAAAASEGTLPRLVVLDDVWEREVVDTLLSLKLKLLVTTRDRSIGGGPESCLELGGMTDNEALELLLKTSETKHQPGNDVKAPMTKVVALSGRLPLVLAIAGSMAAVKGKGLTAGAWEELIAEFESSAAKMEACGEQLNSVNLVMETSFNALSNRRKTNFKKMAVLAAGATAPIEMLLNLWETEDVKGARDEAEGLASKCLLQHMGGDRYRVHDLLLEFATIKLKADVEMAKKAAALQARHLGRLDVVEGYEDPEHGAGDQGLFFLDALWRSVEKLSGNPKLEVSSYRASLAELESGGATADVADSYSSVGKLFHIQVGLCYPVCIHLLRRARSVEDR 2215
MQ AP SG Q TTVERL+HV LLA+KKPWPAFL + AR W+ACP+PVQEALAWM T+ V VL ASVGPL PVC+AFKALIEAA+GAA + LQ LVS CAFL TVLIQHG+AVGPLA VQKPI DFVATTN+LA FAA+ AKG KCRA CHR DL+AL +EE LRRI +DIALVDG+ H Q A L PP LPDMAAVPAGA P + +V+R A+QE D L P+E+ APYTVVG+GGGGK+VL SAVVR SVRE FRGGIFW+ VGRGAK+SLL LLQGLAR++G TDAP V V DSL+QV+ HL AA S GT RLVVLDDVWEREVVD + L K+L+TTRDRS+ G P LELG +T+ EALELL KTS QPG+DV+ MTKVVAL G LPLVLAIAGSM+ V+GKGLTA AWEEL E E+ A KM A GEQ +S+ +V+ETSF++L+ R++ F KMAVLAAGA APIEML NLWE ED +G RD+AEGL SKCLL +GG YRVHDL+LEFA ++A+ E KKA ALQA++LGRLDV+E Y DPEHG GDQGLFFLDALWRSVEKLSG+P LEV+SYRASL ELES AT VA SY SVG LF+IQ Y L R+R+++++
Sbjct: 27 MQRAPASGDQA---GLAAAAVVEPTTVERLDHVGKLLAEKKPWPAFLHIGARATEEWEACPTPVQEALAWMTTSAVGVLGVASVGPLVPVCEAFKALIEAAEGAAECQDKLQSLVSQCAFLATVLIQHGRAVGPLAQVQKPIQDFVATTNELAGFAARWAKGGKCRAFFCHRPDLSALAGFEECLRRIRSDIALVDGLEHHQSFLAALPSLLPPSLPDMAAVPAGALELPSSSYVERAAVQEVADGLTAPEESRAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLARDVGAAPTDAPCGVPRVLDSLEQVRQHL-AAVTSTGTSQRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGVPAGRLELGDVTEEEALELLRKTSGAVGQPGDDVRTKMTKVVALCGHLPLVLAIAGSMSVVRGKGLTAVAWEELAKELENVAKKMRARGEQSSSMKVVLETSFDSLAVRKQEEFLKMAVLAAGALAPIEMLRNLWEIEDAEGTRDDAEGLVSKCLLHAVGGGGYRVHDLVLEFAKTSIRAEEETVKKATALQAQYLGRLDVLESYGDPEHGTGDQGLFFLDALWRSVEKLSGDPGLEVASYRASLEELESCEATEAVATSYGSVGFLFNIQSK--YAEAEPLYERSRAIQEK 695
BLAST of mRNA_P-littoralis_Contig12.68.4 vs. uniprot
Match: A0A6H5KXS7_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXS7_9PHAE) HSP 1 Score: 749 bits (1934), Expect = 1.070e-241 Identity = 424/721 (58.81%), Postives = 498/721 (69.07%), Query Frame = 2
Query: 278 RLEHVRTLLAQKKPWPAFLGVAARGENAWKACPSPVQEALAWMATAGVEVLDTASVGPLKPVCQAFKALIEAAQGAARNEQTLQRLVSWCAFLTTVLIQHGQAVGPLAHVQKPIDDFVATTNQLAAFAAKLAKGSKCRALCCHRIDLAALTDYEEDLRRISNDIALVDGIAHRQETKALARDLRPPELPDMAAVPAGAPPEP-HNFVKRPALQEAVDYLVNPDEALAPYTVVGIGGGGKTVLVSAVVRNSSVRERFRGGIFWIGVGRGAKNSLLPLLQGLAREMGTTATDAPHKVSHVFDSLDQVKLHLSAAAASEGTLPRLVVLDDVWEREVVDTLLSLKLKLLVTTRDRSIGGGPESCLELGGMTDNEALELLLKTSETKHQPGNDVKAPMTKVVALSGRLPLVLAIAGSMAAVKGKGLTAGAWEELIAEFESSAAKMEACGEQLNSVNLVMETSFNALSNRRKTNFKKMAVLAAG-----------------------------ATAPIEMLLNLWETEDVKGARDEAEGLASKCLLQHMGGDRYRVHDLLLEFATIKLKADVEMAKKAAALQARHLGRLDVVEGYEDPEHGAGDQGLFFLDALWRSVEKLSGNPKLEVSSYRASLAELESGGATADVADSYSSVGKLFHIQVGLCYPVCIHLLRRARSVEDRASKSWRKCTSEITPWLPSTHICITVSLDNRAGLFVRLLLLRSSRH 2350
RLE V LLA+K+PWPAFL + AR W+ACP+ QEAL W+ATA V VLD ASVGPL PVC+AFKALIEAA+GAA ++ LQ LVS CAFL TVLIQHG+AVGPLA V KPI+DFV TTN LA FAA+ A G KCRA CHR DL+AL D+EE LRRI +DIALVDG+ H Q A L PP LPDMAAVPAGA P ++V+R A+QE D L +P++ APYTVVG+GGGGK+VL SAVVR SVRE FRGGIFW+ VGRGAK+SLL LLQGLAREMG TDAPH V HV D L+QVK HL AA AS GT PRLVVLDDVWEREVVD + L K+L+TTRDRS+ P LE+G MT+ EALELL K+S QPG+DV+ MTKVVAL G LPLVLAIAGSM+ VKGKGLTA AW+EL E+ A KM A GEQ +S+N V+ETSF++L+ R++ F K+AVLAA A APIEML NLWE ED +G RDEAEGL SKCLL +GG YRVHDL+LE+A +++AD EM +K ALQA LGRLDV++ Y DPEHGAG+Q LFFLDALWRSVEKLSG+P+LEV+ LES AT VA SY SVG LF+IQ Y L R++++++ L H + SL+NRA LLL + RH
Sbjct: 15 RLERVGKLLAEKRPWPAFLHIEARATEEWEACPTVAQEALTWIATATVGVLDVASVGPLVPVCEAFKALIEAAEGAAESQHKLQSLVSQCAFLATVLIQHGRAVGPLAQVHKPIEDFVVTTNDLAGFAARWANGGKCRAFFCHRPDLSALADFEECLRRIRSDIALVDGLEHHQSFLAALPSLLPPSLPDMAAVPAGALELPCSSYVERAAVQEVADGLTSPEDPRAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLAREMGAARTDAPHTVPHVLDGLEQVKQHL-AAVASTGTFPRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVVVPAGRLEVGDMTEEEALELLRKSSGAVGQPGDDVRTKMTKVVALCGHLPLVLAIAGSMSVVKGKGLTAVAWKELAENLENVAKKMRARGEQSSSINAVLETSFDSLAVRKQEEFLKLAVLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAPIEMLRNLWEIEDAEGTRDEAEGLVSKCLLHAVGGGGYRVHDLVLEYAKTRIRADAEMVRKVTALQAHFLGRLDVLKSYRDPEHGAGNQSLFFLDALWRSVEKLSGDPELEVA--------LESCEATEAVARSYWSVGFLFNIQGK--YAEAEPLYERSQAIQENV--------------LGPEHPDVGTSLNNRA-----LLLEKQVRH 705
BLAST of mRNA_P-littoralis_Contig12.68.4 vs. uniprot
Match: D8LGG5_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGG5_ECTSI) HSP 1 Score: 779 bits (2011), Expect = 7.750e-234 Identity = 424/683 (62.08%), Postives = 500/683 (73.21%), Query Frame = 2
Query: 266 TTVERLEHVRTLLAQKKPWPAFLGVAARGENAWKACPSPVQEALAWMATAGVEVLDTASVGPLKPVCQAFKALIEAAQGAARNEQTLQRLVSWCAFLTTVLIQHGQAVGPLAHVQKPIDDFVATTNQLAAFAAKLAKGSKCRALCCHRIDLAALTDYEEDLRRISNDIALVDGIAHRQETKALARDLRPPELPDMAAVPAGAPPEPHNFVKRPALQEAVDYLVNPDEALAPYTVVGIGGGGKTVLVSAVVRNSSVRERFRGGIFWIGVGRGAKNSLLPLLQGLAREMGTTATDAPHKVSHVFDSLDQVKLHLSAAAASEGTLPRLVVLDDVWEREVVDTLLSLKLKLLVTTRDRSIGGGPESCLELGGMTDNEALELLLKTSETKHQPGNDVKAPMTKVVALSGRLPLVLAIAGSMAAVKGKGLTAGAWEELIAEFESSAAKMEACGEQLNSVNLVMETSFNALSNRRKTNFKKMAVLAAGATAPIEMLLNLWETEDVKGARDEAEGLASKCLLQHMGGDRYRVHDLLLEFATIKLKADVEMAKKAAALQARHLGRLDVVEGYEDPEHGAGDQGLFFLDALWRSVEKLSGNPKLEVSSYRASLAELESGGATADVADSYSSVGKLFHIQVGLCYPVCIHLLRRARSVEDRASKSWRKCTSEITPWLPSTHICITVSLDNRAGL 2314
TTVERLEHV LLA+K+PWPAFL + AR W+ACP+ QEAL WM TA V VLD ASVGPL PVCQA KALIEAA+GAA E +Q LVS CAFL TVLIQHG+AVG LA V KPI DFV TTN+LA FAA+ AK KCRA CHR DL+AL +EE LR I +DIALVDG+ Q A LRPP L DMAAVPAGA P +V+R A+QE D L P+E APYTVVG+GGGGK+VL SAVVR SVRE FRGGI W+ VGRGAKNSLLPLLQGLAREMG TDAPH V V DSL+QV+ HL+A AS GT PRLVVLDDVWEREVVD L+ L K+L+TTRD S+ P L+LG MT+ EALELL KTS T QPG+ V+ MTKVVAL G LPLVLAIAGSM+AVKGKGLTA AWEEL FE+ A KM A G+Q +++ +V+ETSF++L+ +++ F +M+VLAAGA APIEML NLWE ED +G RDEAEGL +KCLL +G YRVHD++LEFA ++AD E +KA ALQA+ LGRLDV++ Y DPEHGAGD+GLFFLD+LWRSVEKLSG+P+LEV++YRASL ELES AT D+A SYS+VG LF Q +H RA++++++ L H + SL+NRA L
Sbjct: 23 TTVERLEHVGKLLAEKRPWPAFLHIGARATEEWEACPTLAQEALTWMTTAAVGVLDVASVGPLVPVCQALKALIEAAEGAAECEDKVQSLVSQCAFLATVLIQHGRAVGALAQVHKPIQDFVVTTNELAGFAARWAKDGKCRAFFCHRPDLSALAGFEECLRGIRSDIALVDGLEQHQLFLAALPSLRPPRLLDMAAVPAGALDLPRGYVERAAVQEVADGLTAPEEPRAPYTVVGLGGGGKSVLASAVVRKPSVREHFRGGISWVRVGRGAKNSLLPLLQGLAREMGVAPTDAPHAVPQVLDSLEQVQQHLAAVVASTGTSPRLVVLDDVWEREVVDALVPLGFKVLLTTRDWSVVVVPARRLDLGDMTEEEALELLRKTSGTVGQPGDYVRMKMTKVVALCGHLPLVLAIAGSMSAVKGKGLTAVAWEELAKSFENVAKKMRARGQQSSAIKVVLETSFDSLAVQKQEEFLRMSVLAAGALAPIEMLRNLWEIEDAEGTRDEAEGLVNKCLLHAVGDGGYRVHDMVLEFAKTSIRADEETVEKATALQAQFLGRLDVLKSYRDPEHGAGDRGLFFLDSLWRSVEKLSGDPELEVTTYRASLRELESCKATEDMASSYSAVGFLFDAQRKYIEAEPLH--ERAQAMQEKV--------------LGPEHPGVAQSLNNRADL 689
BLAST of mRNA_P-littoralis_Contig12.68.4 vs. uniprot
Match: A0A6H5LJA6_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJA6_9PHAE) HSP 1 Score: 555 bits (1430), Expect = 2.680e-173 Identity = 305/487 (62.63%), Postives = 362/487 (74.33%), Query Frame = 2
Query: 848 MAAVPAGAPPEPHNFVKRPALQEAVDYLVNPDEALAPYTVVGIGGGGKTVLVSAVVRNSSVRERFRGGIFWIGVGRGAKNSLLPLLQGLAREMGTTATDAPHKVSHVFDSLDQVKLHLSAAAASEGTLPRLVVLDDVWEREVVDTLLSLKLKLLVTTRDRSIGGGPESCLELGGMTDNEALELLLKTSETKHQPGNDVKAPMTKVVALSGRLPLVLAIAGSMAAVKGKGLTAGAWEELIAEFESSAAKMEACGEQLNSVNLVMETSFNALSNRRKTNFKKMAVLAAGATAPIEMLLNLWETEDVKGARDEAEGLASKCLLQHMGGDRYRVHDLLLEFATIKLKADVEMAKKAAALQARHLGRLDVVEGYEDPEHGAGDQGLFFLDALWRSVEKLSGNPKLEVSSYRASLAELESGGATADVADSYSSVGKLFHIQVGLCYPVCIHLLRRARSVEDRASKSWRKCTSEITPWLPSTHICITVSLDNRA 2308
MAAVPAGA P ++V+R A+QE D L+ P+E APY VVG+GGGGKT+LVSAVVR S+VRE FRGG+FW+ VGR AKNSLL LLQGLAREM TD PH V HV +SL+QVK HL A AS GT PRLVVLDDVWEREVVD LLSL LK+LVTTRDRS+ G LELG MT+ EALELLLKTS T QPG++V+ MTKVV L G LPLVLAIAGSM+ VKGKGLTA AWEELI EFE+ A KM GEQ +S+ +V+ TSF+AL+ R++ KM VLAAGA APIEML NLWE ED +G R+EAEGL SKCLLQ +GG YRVHDL+LEF ++A+ EM +KA ALQA++LGR+DV++ Y DPEHGAG+QGLFFLDALWRSVEKLSG+P+LEV+SYRASL ELES AT DVA SY VG LF+IQ + L R+++++++ L H + SL+NRA
Sbjct: 1 MAAVPAGALTLPQSYVERAAVQEVADGLIKPEEPRAPYAVVGMGGGGKTMLVSAVVRKSNVREHFRGGVFWMRVGRHAKNSLLSLLQGLAREMSAAPTDTPHGVPHVLESLEQVKQHL-ATVASAGTSPRLVVLDDVWEREVVDALLSLGLKVLVTTRDRSVVGVSGGLLELGDMTEEEALELLLKTSRTVGQPGHEVRTQMTKVVVLCGHLPLVLAIAGSMSVVKGKGLTAVAWEELIKEFENVAKKMRVRGEQSSSIKVVLGTSFDALAARKQEESLKMTVLAAGALAPIEMLRNLWEIEDAEGTREEAEGLVSKCLLQAVGGSGYRVHDLVLEFVKTSIRAEEEMVEKATALQAQYLGRVDVLKSYGDPEHGAGNQGLFFLDALWRSVEKLSGDPELEVASYRASLGELESCEATEDVASSYRWVGFLFNIQGK--FTEAEPLYGRSQAIQEKV--------------LGPEHPDVATSLNNRA 470
BLAST of mRNA_P-littoralis_Contig12.68.4 vs. uniprot
Match: A0A6H5KU94_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU94_9PHAE) HSP 1 Score: 557 bits (1435), Expect = 2.660e-166 Identity = 310/493 (62.88%), Postives = 361/493 (73.23%), Query Frame = 2
Query: 680 SKCRALCCHRIDLAALTDYEEDLRRISNDIALV-DGIAHRQETKALARDLRPPELPDMAAVPAGAPPEPHN-FVKRPALQEAVDYLVNPDEALAPYTVVGIGGGGKTVLVSAVVRNSSVRERFRGGIFWIGVGRGAKNSLLPLLQGLAREMGTTATDAPHKVSHVFDSLDQVKLHLSAAAASEGTLPRLVVLDDVWEREVVDTLLSLKLKLLVTTRDRSIGGGPESCLELGGMTDNEALELLLKTSETKHQPGNDVKAPMTKVVALSGRLPLVLAIAGSMAAVKGKGLTAGAWEELIAEFESSAAKMEACGEQLNSVNLVMETSFNALSNRRKTNFKKMAVLAAGATAPIEMLLNLWETEDVKGARDEAEGLASKCLLQHMGGDRYRVHDLLLEFATIKLKADVEMAKKAAALQARHLGRLDVVEGYEDPEHGAGDQGLFFLDALWRSVEKLSGNPKLEVSSYRASLAELESGGATADVADSYSSVGKLFHIQ 2152
S C+ LC + + E+ L+ I D+ V D I+ K + PP LPDMA VPA A + +V+R A+++ D + NP+E APYTV G+GGGGK+VL SAVVR SSVRE FRGGIFW+ VGRGAK LLPLLQGL +MG TD PH V HV DSL+QV+ HL A A S GT PRLVVLDDVWEREVVD LL L K+LVTTRDRS+ G P CLELG MT+ EALELLLKTS T +PG+ V+ MTKVV L GRLPLVLAIAGS+ VKGKGLTAGAW +LI E E+ KMEA E NS+N+V+ETSF+AL+ R+K FKK AVLA GA A EMLLNLWETED G R++AEGL SKCLLQ +GG YRVHDL+L+F IK+KAD+EMAKK AALQA+ LGRL+V++ YE PEHGAG+QGLF LDALWRSVE+LSG+PKLEV SY SLA LES AT VA SYSSVG LF IQ
Sbjct: 83 SCCKRLCKSITRCSRHKELEKQLQGIDGDVRRVLDAIS----AKGATGTVLPPSLPDMAKVPAEAVALSDSLYVERAAVRKVADGITNPEEPRAPYTVFGMGGGGKSVLASAVVRKSSVREHFRGGIFWLTVGRGAKKRLLPLLQGLTGDMGAAPTDTPHGVPHVLDSLEQVQRHLGAVA-STGTSPRLVVLDDVWEREVVDALLPLGFKVLVTTRDRSVVGVPTRCLELGDMTEEEALELLLKTSGTVGRPGDSVRTVMTKVVTLCGRLPLVLAIAGSLPVVKGKGLTAGAWGKLIDELENVVTKMEASLEDSNSLNVVLETSFDALTFRKKQAFKKTAVLAPGAVASTEMLLNLWETEDTGGTREDAEGLVSKCLLQDVGGGGYRVHDLVLDFVKIKIKADMEMAKKIAALQAQFLGRLNVLKSYEHPEHGAGNQGLFVLDALWRSVEQLSGDPKLEVPSYSTSLAALESCEATTVVASSYSSVGFLFSIQ 570
BLAST of mRNA_P-littoralis_Contig12.68.4 vs. uniprot
Match: D7FUD7_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD7_ECTSI) HSP 1 Score: 550 bits (1418), Expect = 9.300e-161 Identity = 302/474 (63.71%), Postives = 357/474 (75.32%), Query Frame = 2
Query: 737 EEDLRRISNDIA-LVDGIAHRQETKALARDLRPPELPDMAAVPAGAPPEPHN-FVKRPALQEAVDYLVNPDEALAPYTVVGIGGGGKTVLVSAVVRNSSVRERFRGGIFWIGVGRGAKNSLLPLLQGLAREMGTTATDAPHKVSHVFDSLDQVKLHLSAAAASEGTLPRLVVLDDVWEREVVDTLLSLKLKLLVTTRDRSIGGGPESCLELGGMTDNEALELLLKTSETKHQPGNDVKAPMTKVVALSGRLPLVLAIAGSMAAVKGKGLTAGAWEELIAEFESSAAKMEACGEQLNSVNLVMETSFNALSNRRKTNFKKMAVLAAGATAPIEMLLNLWETEDVKGARDEAEGLASKCLLQHMGGDRYRVHDLLLEFATIKLKADVEMAKKAAALQARHLGRLDVVEGYEDPEHGAGDQGLFFLDALWRSVEKLSGNPKLEVSSYRASLAELESGGATADVADSYSSVGKLFHIQ 2152
E+ L+ I D+ +VD IA K + D+ PP LPDMA VP GA PH+ +V+R A+QE D L NP+E PYTVVGIGGGGK+VL SAVVR SVRE FRGGI W+ VGRGAKNSLLPLLQGLARE+G TDAPH V H DSL+QV+ HL+A A++ + PRLVVLDDVWEREVVD + L KLL+TTRDRSI P LELG MT+ EALELL KTS T PG+DV+ MTKVVAL G LPLVLAIAGSM+AVKGKGLTA AWEEL EFE+ A KM A G+Q +S+ +V+ET+F++L+ R++ F MAVLAAGA APIEML NLWE ED +G EAEGL SK LL +GG YR+HDL+L+FA ++A+ E K+A ALQA++LGRLDVVE Y DPEHGAGDQG+FFLDALWRSVEKLSG+P+LEV+SYRASL LE G AT A SY SVG LF++Q
Sbjct: 10 EKKLQEIGGDVCRVVDAIA----AKRIFTDILPPSLPDMAEVPVGALELPHSSYVERAAVQEVADGLTNPEEPRTPYTVVGIGGGGKSVLASAVVRMPSVREHFRGGISWVRVGRGAKNSLLPLLQGLAREVGAAPTDAPHGVPHALDSLEQVQQHLAAVASTRNS-PRLVVLDDVWEREVVDAFVPLGFKLLLTTRDRSIVCDPAGRLELGDMTEEEALELLRKTSGTV-DPGDDVRMKMTKVVALCGHLPLVLAIAGSMSAVKGKGLTAVAWEELAKEFENVAKKMRARGQQSSSIKVVLETTFDSLATRKQKEFLMMAVLAAGALAPIEMLSNLWEIEDAEGTHAEAEGLVSKYLLHAVGGGGYRMHDLVLDFAKTSIRAEEETVKRATALQAQYLGRLDVVESYGDPEHGAGDQGIFFLDALWRSVEKLSGDPQLEVASYRASLGALEWGEATEAAARSYFSVGFLFNVQ 477
BLAST of mRNA_P-littoralis_Contig12.68.4 vs. uniprot
Match: D8LPV9_ECTSI (NB-ARC and TPR repeat-containig protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPV9_ECTSI) HSP 1 Score: 510 bits (1313), Expect = 8.660e-150 Identity = 276/455 (60.66%), Postives = 333/455 (73.19%), Query Frame = 2
Query: 788 AHRQETKALARDLRPPELPDMAAVPAGAPPEPHNFVKRPALQEAVDYLVNPDEALAPYTVVGIGGGGKTVLVSAVVRNSSVRERFRGGIFWIGVGRGAKNSLLPLLQGLAREMGTTATDAPHKVSHVFDSLDQVKLHLSAAAASEGTLPRLVVLDDVWEREVVDTLLSLKLKLLVTTRDRSIGGGPESCLELGGMTDNEALELLLKTSETKHQPGNDVKAPMTKVVALSGRLPLVLAIAGSMAAVKGKGLTAGAWEELIAEFESSAAKMEACGEQLNSVNLVMETSFNALSNRRKTNFKKMAVLAAGATAPIEMLLNLWETEDVKGARDEAEGLASKCLLQHMGGDRYRVHDLLLEFATIKLKADVEMAKKAAALQARHLGRLDVVEGYEDPEHGAGDQGLFFLDALWRSVEKLSGNPKLEVSSYRASLAELESGGATADVADSYSSVGKLFHIQ 2152
A R+ + RD+ PP LP AAVP GA P ++V+RP +QEA+ L++P++ALAPY +VG+GGGGKTVL SA+VR SSV E FRGGIFW+ +GRGA SLL LQGLAREMG TDAPH V HVFDSL+QV HL AA S G+ PRLVVLDDVWEREVV L + LK+LVTTRDRSI G P LELG M ++EALELL KTS T QPG+ V+ MTKVV GRLPLVLAIAGSM VKGKGL GAWEELI EFE+ M GE+ ++++V+ SFNAL+ R++ F +MAVLA GA AP EML NLWE +DV+G ++EAEGL +KCLLQ + G YRVHDLLL++ +K+K D E KKA ALQA++LGRLDVV Y D +HGA +QGLF L LWR +EKLSG+P LE +SYRA L EL+S ATA+VA+ V L+ IQ
Sbjct: 217 AQRKAFSTMIRDVLPPTLPQRAAVPTGALALPRSYVERPGVQEAMGDLMDPEKALAPYMIVGMGGGGKTVLASALVRKSSVLEHFRGGIFWMEMGRGANKSLLHRLQGLAREMGAAPTDAPHGVPHVFDSLEQVMQHL-AAVVSRGSSPRLVVLDDVWEREVVAAFLGVGLKVLVTTRDRSIVGVPGGLLELGDMAEDEALELLWKTSGTVGQPGDGVRTQMTKVVDRCGRLPLVLAIAGSMPVVKGKGLKDGAWEELIEEFENVTTIMWEPGEESRNLDMVLGASFNALAARKREEFLRMAVLAPGAVAPFEMLRNLWEIQDVEGTKEEAEGLVNKCLLQDVDGVGYRVHDLLLKYLRVKIKQDGERVKKATALQAQYLGRLDVVMSYGDQKHGADNQGLFGLGTLWRCLEKLSGDPVLETASYRAILGELDSCEATAEVANCLEWVALLYDIQ 670
BLAST of mRNA_P-littoralis_Contig12.68.4 vs. uniprot
Match: A0A6H5JW28_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW28_9PHAE) HSP 1 Score: 420 bits (1080), Expect = 5.600e-128 Identity = 255/485 (52.58%), Postives = 300/485 (61.86%), Query Frame = 2
Query: 365 KACPSPVQEALAWMATAGVEVLDTASVGPLKPVCQAFKALIEAAQGAARNEQTLQRLVSWCAFLTTVLIQHGQAVGPLAHVQKPIDDFVATTNQLAAFAAKLAKGSKCRALCCHRIDLAALTDYEEDLRRISNDIALVDGIAHRQETKALARDLRPPELPDMAAVPAGAPPEPHNFVKRPALQEAVDYLVNPDEALAPYTVVGIGGGGKTVLVSAVVRNSSVRERFRGGIFWIGVGRGAKNSLLPLLQGLAREMGTTATDAPHKVSHVFDSLDQVKLHLSAAAASEGTLPRLVVLDDVWEREVVDTLLSLKLKLLVTTRDRSIGGGPESCLELGGMTDNEALELLLKTSETKHQPGNDVKAPMTKVVALSGRLPLVLAIAGSMAAVKGKGLTAGAWEELIAEFESSAAKMEACGEQLNSVNLVMETSFNALSNRRKTNFKKMAVLAAGATAPIEMLLNLWETEDVKGARDEAEGLASKCLLQHMG 1819
+ACPSPVQEAL WMAT+ V VLD ASVGPL+PVCQAFKALIEAA+GA +++ LQ LVS C FLTTVLI+H +AV PLA VQ PI DFV TTN+LAAFA + CHR DL+ LTD+EE LRRI DI DG+ + Q++ L R L PP LPDMAAVPAGA PH++V+R A+QE D L NP+E APY+ VG+GGGGK+VL SAVVR SSV + FRGG + +G R + PRLVVLDDVWE EVVD LL L LK+LVTT DRS+ G C+E+G MT+ EALELL KTS T + A T V R G A + KGLTAGAW +LI E E A KMEA E +S+N+V+ETSFNAL+ +K FKK AVLA GA EMLLNLWET+D G R+EAEGL SKCL G
Sbjct: 5 EACPSPVQEALPWMATSAVGVLDIASVGPLEPVCQAFKALIEAAEGAVESQEKLQSLVSRCRFLTTVLIRHRRAVDPLAQVQTPIGDFVVTTNKLAAFAESGPGVASAGRFFCHRTDLSTLTDFEEGLRRIGADINSEDGLEYHQQSIGLGRALLPPSLPDMAAVPAGALALPHSYVERAAVQEVADGLTNPEEPRAPYSAVGMGGGGKSVLASAVVRKSSVTQHFRGGRWALGHPRAS--------------------------------------------------PRLVVLDDVWEPEVVDALLPLGLKVLVTTIDRSVLGVSSGCVEVGDMTEGEALELLRKTSRTVGRC-----ALWTSTVGARDR--------GFHARRERKGLTAGAWGKLI-ELEDVATKMEASDEDSDSLNVVLETSFNALTLTKKREFKKSAVLAPGAVVSTEMLLNLWETKDTGGTREEAEGLVSKCLPARCG 425
BLAST of mRNA_P-littoralis_Contig12.68.4 vs. uniprot
Match: D7G6W2_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6W2_ECTSI) HSP 1 Score: 451 bits (1161), Expect = 2.940e-127 Identity = 294/633 (46.45%), Postives = 365/633 (57.66%), Query Frame = 2
Query: 194 MQSAPPSGGQGQGXXXXXXXXXXXTTVERLEHVRTLLAQKKPWPAFLGVAARGENAWKACPSPVQEALAWMATAGVEVLDTASVGPLKPVCQAFKALIEAAQGAARNEQTLQRLVSWCAFLTTVLIQHGQAVGPLAHVQKPIDDFVATTNQLAAFAAKLAKGSKCRALCCHRIDLAALTDYEEDLRRISNDIALVDGIAHRQETKALARDLRPPELPDMAAVPAGAPPEPHNFVKRPALQ-EAVDYLVNPDEALAPYTVVGIGGGGKTVLVSAVVRNSSVRERFRGGIFWIGVGRGAKNSLLPLLQGLA-REMGTTATDAPHKVSHVFDSLDQVKLHLSAAAASEGTLPRLVVLDDVWEREVVDTLLSLKLKLLVTTRDRSIGGGPESCLELGGMTDNEALELL-----------LKTSETKHQPGNDVKAPMTKVVALSGRLPLVLAIAGSMAAVKGKGLTAGAWEELIAEFESSAAKMEACGEQLNSVNLVMETSFNALSN--RRKTNFKKMAVLAAGATAPIEMLLNLWETEDVKGARDEAEGLASKCLLQHMGGDRYRVHDLLLEFATIKLKADVEMAKKAAALQARHLGRLDVVEGYEDPEHGAGDQGLFFLDALWRSVEKLSGNPKL 2047
MQ AP SGGQ T ERL+HV LLA+KKPWPAFL + AR W+ACP+PVQEAL WMA A V VLD ASVGPL+PVCQAFK LIEAA+GAA ++ L+ L+S CAFLTTVLIQH +AVGPLA VQKP+ DFVATTN LAAFAA AKG KCRAL CHR D + LTD+EE LR ISNDIALVDG+ H Q A+ R LRPP LP MA+VPAG + RP+L A+ YL N AP + G+ G GK+VL SAVVR+ VRE F G+FW+ R AK+ L L+G A R T+ T +P S+++V +L A A + PRLVVLDDVWERE+VD L L+LLVTTRDRS+ P C+E+G M ++EALE+L L +E P D K+ T ALS + L MA K V+ V+E S A+++ ++ +AVLA G AP +ML +LW+ E + A L + +LQ GD +RVHDL+L F KLKAD A + A +LG+L V+ Y G G++ L ALWRSVE L G ++
Sbjct: 1 MQRAPTSGGQA-----GLVAAVEPTAAERLDHVGKLLAEKKPWPAFLHIGARATEEWEACPTPVQEALVWMARATVGVLDIASVGPLEPVCQAFKGLIEAAEGAAESQDKLKGLISRCAFLTTVLIQHDRAVGPLAQVQKPMKDFVATTNDLAAFAATWAKGGKCRALFCHRSDRSTLTDFEEGLRTISNDIALVDGLEHHQLLLAVYRQLRPPTLPAMASVPAGPISLTDGHISRPSLLGRAIGYLTNTAVGDAPCVLTGMAGAGKSVLASAVVRDEKVREHFHAGMFWVRA-RDAKDQLHACLEGFALRVASTSGTTSPG-----LGSVEEVTRYLKAVCA-DSVSPRLVVLDDVWEREIVDALKLTGLQLLVTTRDRSVVSMPGECVEVGDMEEDEALEVLRVGCGASKNLELPRAEALQGPPQDPKSWRTLHEALSKAMSTRLGTDRIMAVPK-------------------------------RVDAVLEVSLGAMADDPAKQQRCLFLAVLAPGTLAPSDMLEDLWD-EAPGATKTFAAQLVDQSMLQP-AGDAFRVHDLVLLFLKPKLKADPNRPI-ATSRFAEYLGQLKVLRRYLGD--GETSDGVYALMALWRSVEDLVGESRV 585 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig12.68.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig12.68.4 >prot_P-littoralis_Contig12.68.4 ID=prot_P-littoralis_Contig12.68.4|Name=mRNA_P-littoralis_Contig12.68.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=722bp MQSAPPSGGQGQGGPGGPATPMEPTTVERLEHVRTLLAQKKPWPAFLGVAback to top mRNA from alignment at P-littoralis_Contig12:306283..318678- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig12.68.4 ID=mRNA_P-littoralis_Contig12.68.4|Name=mRNA_P-littoralis_Contig12.68.4|organism=Pylaiella littoralis U1_48|type=mRNA|length=12396bp|location=Sequence derived from alignment at P-littoralis_Contig12:306283..318678- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig12:306283..318678- >mRNA_P-littoralis_Contig12.68.4 ID=mRNA_P-littoralis_Contig12.68.4|Name=mRNA_P-littoralis_Contig12.68.4|organism=Pylaiella littoralis U1_48|type=CDS|length=2166bp|location=Sequence derived from alignment at P-littoralis_Contig12:306283..318678- (Pylaiella littoralis U1_48)back to top |