mRNA_P-littoralis_Contig12.65.2 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig12.65.2 vs. uniprot
Match: D8LAT7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAT7_ECTSI) HSP 1 Score: 421 bits (1081), Expect = 9.050e-139 Identity = 231/239 (96.65%), Postives = 235/239 (98.33%), Query Frame = 2
Query: 212 MNLFGKAKAKPQTADTTSTILKLRETLDSLDKRENHIQKKIKTQLLDAKAKSSAKDKRGALFALKRKKMYEGEVNKLNGARMTLESQIIALEGSNMNMQTFNAMRSGAKAMQDARGRLDVDQVDDVMDDIKDEMDIAEQIGDAIARPADDLFDDDALLEELDMLEEADLEEQLLAPPAVPSARPAAPEGVEQPSVAESKVPAGYDLPSVPSNTPVSAPVAVEEDEDARALRELEASMAM 928
MNLFGKAKAKPQ ADTTSTILKLRETLDSLDKRENHIQKKIK QLLDAKAKSSAKDKRGALFALKRKKMYEGEVNKLNGARMTLESQIIALEGSNMNMQTFNAMRSGAKAMQDARGRLDVDQVDDVMDDIKDEMDIAEQIGDAIARPADDLFDDDALLEELDMLEEADLEEQLLAPPAVP+ARPAAP+GVEQP+VAESKVP GY+LPSVPS TPVSAPVAVEEDEDARALRELEASMAM
Sbjct: 1 MNLFGKAKAKPQAADTTSTILKLRETLDSLDKRENHIQKKIKAQLLDAKAKSSAKDKRGALFALKRKKMYEGEVNKLNGARMTLESQIIALEGSNMNMQTFNAMRSGAKAMQDARGRLDVDQVDDVMDDIKDEMDIAEQIGDAIARPADDLFDDDALLEELDMLEEADLEEQLLAPPAVPTARPAAPQGVEQPAVAESKVPEGYELPSVPSTTPVSAPVAVEEDEDARALRELEASMAM 239
BLAST of mRNA_P-littoralis_Contig12.65.2 vs. uniprot
Match: A0A836CAA0_9STRA (Snf7-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAA0_9STRA) HSP 1 Score: 259 bits (661), Expect = 1.100e-76 Identity = 162/250 (64.80%), Postives = 187/250 (74.80%), Query Frame = 2
Query: 212 MNLFGKAK--AKPQTADTTSTILKLRETLDSLDKRENHIQKKIKTQLLDAKAKSSAKDKRGALFALKRKKMYEGEVNKLNGARMTLESQIIALEGSNMNMQTFNAMRSGAKAMQDARGRLDVDQVDDVMDDIKDEMDIAEQIGDAIARPADDLFDDDALLEELDMLEEADLEEQLLAPPAVPSARPAA-----------PEGVEQPSVAESKVPAGYDLPSVPSNTPVSAPVAVEEDEDARALRELEASM 922
MNLFGK K A D T TI+KL+ET+D+L+KRE H+QKKIK QLL+AKAKS DK+GALFALKRKKMYE E+NK+NGAR+TLE Q IALEGSN N+QTF AM SG KAMQ ARG+LDVD VD VMDDI++EMDIA+QIG+AIARPA+ LFDDD LL EL +EEA++EE LLA PAVP+ P+A P G QP VA +G DLPSVP+ V P A EEDED RALRELEASM
Sbjct: 1 MNLFGKKKSAASGTPTDPTPTIMKLQETIDTLEKRETHLQKKIKAQLLEAKAKSQT-DKKGALFALKRKKMYEAEINKINGARITLEQQKIALEGSNTNLQTFQAMNSGRKAMQAARGQLDVDDVDAVMDDIQEEMDIADQIGEAIARPAEGLFDDDDLLAELGAMEEAEMEETLLAAPAVPARPPSAAMAAGSPTLVVPGGARQP-VAAGSGSSGMDLPSVPTGD-VRVPAA-EEDEDLRALRELEASM 246
BLAST of mRNA_P-littoralis_Contig12.65.2 vs. uniprot
Match: A0A6H5KZ84_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ84_9PHAE) HSP 1 Score: 249 bits (637), Expect = 1.010e-74 Identity = 136/144 (94.44%), Postives = 141/144 (97.92%), Query Frame = 2
Query: 497 MNMQTFNAMRSGAKAMQDARGRLDVDQVDDVMDDIKDEMDIAEQIGDAIARPADDLFDDDALLEELDMLEEADLEEQLLAPPAVPSARPAAPEGVEQPSVAESKVPAGYDLPSVPSNTPVSAPVAVEEDEDARALRELEASMAM 928
MNMQTFNAMRSGAKAM+ ARGRLDVDQVDDVMDDIKDEMDIAEQIGDAIARPADDLFDDDALLEELDMLEEADLEEQLLAPPAVP+ARPAAP+GVEQP+VAESKVP GY+LPSVPS TPVSAPVAVEEDEDARALRELEASMAM
Sbjct: 1 MNMQTFNAMRSGAKAMEGARGRLDVDQVDDVMDDIKDEMDIAEQIGDAIARPADDLFDDDALLEELDMLEEADLEEQLLAPPAVPTARPAAPQGVEQPAVAESKVPQGYELPSVPSTTPVSAPVAVEEDEDARALRELEASMAM 144
BLAST of mRNA_P-littoralis_Contig12.65.2 vs. uniprot
Match: A0A1W0A9Q0_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A9Q0_9STRA) HSP 1 Score: 199 bits (505), Expect = 1.310e-54 Identity = 128/244 (52.46%), Postives = 168/244 (68.85%), Query Frame = 2
Query: 212 MNLFGKAKAKPQT---ADTTSTILKLRETLDSLDKRENHIQKKIKTQLLDAKAKSSAKDKRGALFALKRKKMYEGEVNKLNGARMTLESQIIALEGSNMNMQTFNAMRSGAKAMQDARGRLDVDQVDDVMDDIKDEMDIAEQIGDAIARPADD-LFDDDALLEELDMLEEADLEEQLLAPPAVPSARPAAPEGVEQPSVAESKVPAGYDLPSVPSNTPVSAPVAVEEDEDA-RALRELEASMAM 928
MNLFG+ A P A+T TI KLRE LD L+KRE+HI+KKI+ QL +AK KS+AKDKRGA+F LKRKKMYE E+ KL GARMTLE+Q++ LE + +NMQTF A+R+GA M+ G+++VD VDD+MDDI++EM A++IG AI++P + L+DDD L ELDML E DLE+QL A P+ PA P V P+ A + + + P PS+ + V+ + D D LR LEASMAM
Sbjct: 1 MNLFGRKAAAPVKTGPAETAETIRKLREQLDILEKRESHIEKKIEAQLEEAKKKSAAKDKRGAIFCLKRKKMYESEIEKLQGARMTLETQVMTLESTQVNMQTFTALRTGANQMKAIHGQMNVDSVDDIMDDIQEEMATADEIGRAISQPLGNALYDDDELAAELDMLVEEDLEKQLDAAHQQPA--PAQPARV--PAQAPATAASMFTFPEAPSHAVTNIKVSGKADADELEELRRLEASMAM 240
BLAST of mRNA_P-littoralis_Contig12.65.2 vs. uniprot
Match: A0A482SS87_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SS87_9ARCH) HSP 1 Score: 195 bits (496), Expect = 1.840e-53 Identity = 127/245 (51.84%), Postives = 165/245 (67.35%), Query Frame = 2
Query: 212 MNLFGKAKAKPQTADTTS---TILKLRETLDSLDKRENHIQKKIKTQLLDAKAKSSAKDKRGALFALKRKKMYEGEVNKLNGARMTLESQIIALEGSNMNMQTFNAMRSGAKAMQDARGRLDVDQVDDVMDDIKDEMDIAEQIGDAIARPADDLFDDDALLEELDMLEEADLEEQLL--APPAVPSARPAAPEGVEQPSVAESKVPAGYDLPSVPSN--TPV-SAPVAVEEDEDARALRELEASM 922
MNLFGK K Q T S TI KLRE+L+ L+KRE HI KKI L +AK KS KDK GALFALKRKK+YE EV KL GAR+T+E+QI++LE +++N++TF AM++GA AM+ RG +D D+VDDVMD + +E DI + I +AI+RP DLF+D+ LL+EL L+ ++E + PA P A P P+ V ++ P+VP+ +PV S PVA EEDED RALRELEASM
Sbjct: 1 MNLFGKKKQAQQPVPTQSPIETIAKLRESLNILEKREEHINKKIDASLQEAKLKSQKKDKNGALFALKRKKLYEAEVAKLQGARITMETQILSLESASVNIETFKAMKTGANAMKAMRGDIDADKVDDVMDALAEEKDIQDAISEAISRPGQDLFNDEELLDELAELDALEMEASVANTVAPAAPVAPP--PQSV-------------FNFPAVPTKAVSPVPSKPVAHEEDEDERALRELEASM 230
BLAST of mRNA_P-littoralis_Contig12.65.2 vs. uniprot
Match: A0A7S3XYN0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XYN0_HETAK) HSP 1 Score: 192 bits (489), Expect = 1.950e-52 Identity = 119/242 (49.17%), Postives = 164/242 (67.77%), Query Frame = 2
Query: 212 MNLFGKAK--AKPQTADTTSTILKLRETLDSLDKRENHIQKKIKTQLLDAKAKSSAKDKRGALFALKRKKMYEGEVNKLNGARMTLESQIIALEGSNMNMQTFNAMRSGAKAMQDARGRLDVDQVDDVMDDIKDEMDIAEQIGDAIARPADDLFDDDALLEELDMLEEADLEEQLLAPPAVPSARPAAPEGVEQPSVAESKVPAGYDLPSVPSNTPVSAPVAVEED-EDARALRELEASMAM 928
MNLFGK K A P +T TI++LR T+++LDKRE I KI Q +AKAK KD+RGA+F LKRKKMYE E++KLNGA++ LE QI ALEG+++N + F A R+ A++ ARG +D D V++ +DDI +EM++A +IG+AI+RPA +LF+D+ LL+EL LEE +EE LLA PA P P A E E+K PA YDLP+ P+ ++ + + D +D ALR LEA +A+
Sbjct: 1 MNLFGKKKKAAVPAATNTADTIIRLRGTIETLDKRETFIAAKIVQQTNEAKAKLKKKDQRGAMFCLKRKKMYEKEIDKLNGAKLQLEQQIFALEGAHINTEAFEASRAAVGALKAARGNIDADTVEETLDDINEEMELANEIGEAISRPAQELFEDEELLDELRELEELGVEEDLLAAPAAPVRAPPAAAVAE-----EAKQPA-YDLPAAPTGAVAASAIQGDVDADDLDALRALEAELAV 236
BLAST of mRNA_P-littoralis_Contig12.65.2 vs. uniprot
Match: A0A7S3NK50_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NK50_9STRA) HSP 1 Score: 190 bits (483), Expect = 9.180e-52 Identity = 118/244 (48.36%), Postives = 155/244 (63.52%), Query Frame = 2
Query: 212 MNLFGKAKAKPQ-----TADTTSTILKLRETLDSLDKRENHIQKKIKTQLLDAKAKSSAKDKRGALFALKRKKMYEGEVNKLNGARMTLESQIIALEGSNMNMQTFNAMRSGAKAMQDARGRLDVDQVDDVMDDIKDEMDIAEQIGDAIARPADDLFDDDALLEELDMLEEADLEEQLLAPPAVPSARPAAPEGVEQPSVAESKVPAGYDLPSVPSNTPVSAPVAVEEDEDARALRELEASMAM 928
MNLFGK KA D TIL+LR T+++L+KR+ H+ KKI+ QL +AK K + KDKRGAL+ LKRKKMYEGE+ K+NGAR+TLE Q+IA+EG+ N +T AM +G AM AR + VD V ++MDDI DE++ A I +AI+ PA+ + DD+ LL EL+ LEE +LE QLL PAVP+ DLP VP+ TP +ED D +ALRELEA+MA+
Sbjct: 1 MNLFGKKKAAGSGTGGGNVDPAQTILQLRNTVETLEKRQVHLDKKIEQQLAEAKVKIAKKDKRGALYCLKRKKMYEGEIEKINGARLTLEQQMIAIEGTVTNSETVKAMTAGKDAMAKARAGVTVDDVGELMDDITDEVEQANDIAEAISAPANQVLDDEDLLNELNELEELELESQLLDAPAVPAT--------------------AIDLPDVPTATPEIPVQQNQEDADTKALRELEAAMAL 224
BLAST of mRNA_P-littoralis_Contig12.65.2 vs. uniprot
Match: A0A6G0XHZ3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XHZ3_9STRA) HSP 1 Score: 191 bits (485), Expect = 9.810e-52 Identity = 123/247 (49.80%), Postives = 165/247 (66.80%), Query Frame = 2
Query: 212 MNLFGK---AKAKPQTADTTSTILKLRETLDSLDKRENHIQKKIKTQLLDAKAKSSAKDKRGALFALKRKKMYEGEVNKLNGARMTLESQIIALEGSNMNMQTFNAMRSGAKAMQDARGRLDVDQVDDVMDDIKDEMDIAEQIGDAIARP-ADDLFDDDALLEELDMLEEADLEEQLL--APPAVPSA-RPAAPEGVEQPSVAESKVPAGYDLPSVPSNTPVSAPVAVEEDEDA-RALRELEASMAM 928
MNLFG+ A + +DT TI KLRE LD+L+KRE+HI+KKI QL +AK KS+AKDKRGA+F LKRKKMYE E+ KL GARMTLE+Q++ LE + +NM TF AMR G + M+ G+++V+ VDD+MDDI++EM A +I AI++P + L+DDD L EL LE+ +EE+L P A P+A RP A ++P A++ PA +LP P++ V + D D LR LEASMAM
Sbjct: 1 MNLFGRKAPAPVRTSPSDTAETIRKLREQLDTLEKRESHIEKKIALQLEEAKKKSAAKDKRGAIFCLKRKKMYESEIEKLQGARMTLETQVMTLESTQVNMATFQAMRVGTQQMKAIHGQMNVESVDDIMDDIQEEMATANEIAQAISQPIGNTLYDDDELESELAALEDLAMEEELANATPVAAPAAVRPPAQPVAQRPQPAQAVSPAVLNLPEAPTHAVSQVKVTGKADADELEELRRLEASMAM 247
BLAST of mRNA_P-littoralis_Contig12.65.2 vs. uniprot
Match: A0A418AQT0_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A418AQT0_9STRA) HSP 1 Score: 191 bits (484), Expect = 2.390e-51 Identity = 120/244 (49.18%), Postives = 166/244 (68.03%), Query Frame = 2
Query: 212 MNLFGK---AKAKPQTADTTSTILKLRETLDSLDKRENHIQKKIKTQLLDAKAKSSAKDKRGALFALKRKKMYEGEVNKLNGARMTLESQIIALEGSNMNMQTFNAMRSGAKAMQDARGRLDVDQVDDVMDDIKDEMDIAEQIGDAIARPADD-LFDDDALLEELDMLEEADLEEQLLAPPAVPSARPAAPEGVEQPSVAESKVPAGYDLPSVPSNTPVSAPVAVEEDEDA-RALRELEASMAM 928
MNLFG+ A + ADT TI K+RE LD+L+KRE HI+KK++ QL +AK KS+AKDKRGA+F LKRKKMYE E+ KL GARMTLE+Q++ LE + +NM TF A+RSGA M+ G+++VD VDD+MDDI++EM A++IG AI++P + L+D+D L ++L L++ +EEQL P V + A P+ Q + A+ A ++LP VP++ V + D D LR LEASMAM
Sbjct: 24 MNLFGRKAPAPVRTSPADTAETIRKIREQLDTLEKREAHIEKKMELQLEEAKKKSAAKDKRGAIFCLKRKKMYESEIEKLQGARMTLETQVMTLESTQVNMATFTALRSGANQMKAIHGQMNVDSVDDIMDDIQEEMATADEIGRAISQPLGNALYDEDELEQQLRELDDLAMEEQLATPSPVAAPVQARPQPA-QAAPAQQPAQAMFNLPEVPTHAVSQVKVTGKADADELEELRRLEASMAM 266
BLAST of mRNA_P-littoralis_Contig12.65.2 vs. uniprot
Match: A0A024GI76_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GI76_9STRA) HSP 1 Score: 186 bits (472), Expect = 4.290e-50 Identity = 123/247 (49.80%), Postives = 168/247 (68.02%), Query Frame = 2
Query: 212 MNLFGKAKAKPQ---TADTTSTILKLRETLDSLDKRENHIQKKIKTQLLDAKAKSSAKDKRGALFALKRKKMYEGEVNKLNGARMTLESQIIALEGSNMNMQTFNAMRSGAKAMQDARGRLDVDQVDDVMDDIKDEMDIAEQIGDAIARPAD-DLFDDDALLEELDMLEEADLEEQLLAPPAVPSARPAAPEGVEQPS-VAESKVPAGYDLPSVPSN---TPVSAPVAVEEDEDARALRELEASMAM 928
MNLF + A ++ T TI KLRE LD+L+KRE HI K+ +QL +AK KS+AKDKRGA+FALKRKKMYE E+ KL GARMTLE+QI+ LE +++NM+TFNAMRSGA M+ G++ VD VD++MDDI++EM A++I AI++P +L+DDD L EL+ +EE +EE + PAV AR +PS V + +PA Y+LP P++ + V E++E+ ALR LE+SMAM
Sbjct: 1 MNLFRRKTASSHQNTSSQTADTIKKLREQLDTLEKREQHICTKVSSQLQEAKKKSAAKDKRGAIFALKRKKMYENEIEKLQGARMTLETQIMTLESAHVNMETFNAMRSGAGQMKAIHGQISVDTVDNIMDDIQEEMATADEISRAISQPVGTELYDDDELEAELEAMEELSVEE---SKPAVAEAR--------KPSKVTNTPIPA-YNLPEPPTHKVENRTNPIVGAEDEEELEALRRLESSMAM 235 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig12.65.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig12.65.2 >prot_P-littoralis_Contig12.65.2 ID=prot_P-littoralis_Contig12.65.2|Name=mRNA_P-littoralis_Contig12.65.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=240bp MNLFGKAKAKPQTADTTSTILKLRETLDSLDKRENHIQKKIKTQLLDAKAback to top mRNA from alignment at P-littoralis_Contig12:284144..291000- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig12.65.2 ID=mRNA_P-littoralis_Contig12.65.2|Name=mRNA_P-littoralis_Contig12.65.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=6857bp|location=Sequence derived from alignment at P-littoralis_Contig12:284144..291000- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig12:284144..291000- >mRNA_P-littoralis_Contig12.65.2 ID=mRNA_P-littoralis_Contig12.65.2|Name=mRNA_P-littoralis_Contig12.65.2|organism=Pylaiella littoralis U1_48|type=CDS|length=720bp|location=Sequence derived from alignment at P-littoralis_Contig12:284144..291000- (Pylaiella littoralis U1_48)back to top |