mRNA_P-littoralis_Contig12.236.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig12.236.1
Unique NamemRNA_P-littoralis_Contig12.236.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig12.236.1 vs. uniprot
Match: A0A7S4A7X0_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A7X0_9STRA)

HSP 1 Score: 187 bits (476), Expect = 1.400e-48
Identity = 127/362 (35.08%), Postives = 171/362 (47.24%), Query Frame = 1
Query:  145 VTLAITTCKRLRAFLGTAEGL-QVLLGPLPQNVADGGDVPRVCQVLVVDDGSSPKDRGLMMSSFPRFTYVFKGPGDVKGHAGSMNLILSLTTTRYLLYVEDDWWAVHDYSLPPRSGVRNFLWRAMEVLKSSTERVSQASHVIINDQSTRNCAWGDTATCTSDIQGTMSGWPRTTAPAVSTPGQEHRYKGSADPMETAGDDAAGRSGMHYLNEGLCATSKGPEGDGGVCGSDRNVTRRSRSGRDTAFGGSTPVSSDRGGGGTAVVEYRLHEFGLLSPLQGFSHWPGFSLNPALWDLARLGGSYRQQYSRKFEFNPADDRFEQRISMELWGAGIAVAHLPDVTFRHVGAGQSAYEANAMRRPWD 1227
            VT+ +TTCKRLR F  T +GL +V  G L        D P VC+V+V+DDGSS  DR  MM  FPR  +V K   + KGHA SMNL+LS+  T YLLY+EDDW A+   S      V + L  A+ VL+++ E       V++NDQS+R+CA+     C   + G  +GWPR T+                                                DG                                      + YRLH++G + P   F++WPGFSLNPALWD+ RL  ++ + +     FN  D RFEQ  S++ + AGI VA+LP V+F H G  Q+AY  N   RP+D
Sbjct: 1013 VTVGLTTCKRLRHFRLTMQGLIRVFQGDLV-------DHPLVCRVVVIDDGSSEGDRLDMMREFPRVDFVLKNNEEHKGHARSMNLLLSMVQTPYLLYMEDDWLALDHVS------VTHVLDEALSVLRAAHEE-EPVVEVLLNDQSSRSCAYAAEEGC--PMLG-KAGWPRVTS------------------------------------------------DG--------------------------------------IAYRLHDYGTVEPGHAFTYWPGFSLNPALWDVRRLQCAFSESFGEPPVFNSTDARFEQSFSLKAYDAGIRVAYLPRVSFAHTGVDQTAYALNNFTRPFD 1271          
BLAST of mRNA_P-littoralis_Contig12.236.1 vs. uniprot
Match: A0A7S4SZ12_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4SZ12_9STRA)

HSP 1 Score: 171 bits (433), Expect = 2.940e-47
Identity = 118/352 (33.52%), Postives = 159/352 (45.17%), Query Frame = 1
Query:  175 LRAFLGTAEGLQVLLGPLPQNVADGGDVPRVCQVLVVDDGSSPKDRGLMMSSFPRFTYVFKGPGDVKGHAGSMNLILSLTTTRYLLYVEDDWWAVHDYSLPPRSGVRNFLWRAMEVLKSSTERVSQASHVIINDQSTRNCAWGDTAT-CTSDIQGTMSGWPRTTAPAVSTPGQEHRYKGSADPMETAGDDAAGRSGMHYLNEGLCATSKGPEGDGGVCGSDRNVTRRSRSGRDTAFGGSTPVSSDRGGGGTAVVEYRLHEFGLLSPLQGFSHWPGFSLNPALWDLARLGGSYRQQYSRKFEFNPADDRFEQRISMELWGAGIAVAHLPDVTFRHVGAGQSAYEANAMRRPWD 1227
            L+ FL T + LQ       + + +      +C VLVVDD SS +DR  MM +FP FTY+FK PG  KGHA S+NLIL++  TRYLLY+EDDW  +        +   + +  AM VL++  E  +  + V++NDQS+R+CA GD  T CT +     +GW R                                                                      +  F G T             V Y  HEFG++ P   FS+WPGFSLNPA+WDL RL             F+  D  FEQ  S++   AG+  AHLP + FRH+G G S+Y  N+ +RPWD
Sbjct:    1 LQLFLETVQSLQ---NAFAERLLES---KMICDVLVVDDSSSEEDRRTMMRTFPEFTYIFK-PGRDKGHASSLNLILNVIKTRYLLYIEDDWKTI--------ANTVDMITDAMIVLRAPVE--NPIAQVLLNDQSSRSCAHGDNITSCTKNKYYGKAGWKR----------------------------------------------------------------------EALFDGQT-------------VPYIEHEFGVVYPEHTFSYWPGFSLNPAIWDLDRLHSKMNVL------FDEEDITFEQTFSLKAMDAGLTFAHLPQINFRHIGQGISSYVLNSKQRPWD 246          
BLAST of mRNA_P-littoralis_Contig12.236.1 vs. uniprot
Match: F0XYF1_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XYF1_AURAN)

HSP 1 Score: 171 bits (432), Expect = 9.760e-43
Identity = 124/360 (34.44%), Postives = 166/360 (46.11%), Query Frame = 1
Query:  139 GC-VTLAITTCKRLRAFLGTAEGLQVLLGPLPQNVADGGDVPR---VCQVLVVDDGSSPKDRGLMMSSFPRFTYVFKGPGDVKGHAGSMNLILSLTTTRYLLYVEDDWWAVHDYSLPPRSGVRNFLWRAMEVLKSSTERVSQASHVIINDQSTRNCAWGDTATCTSDIQGTMSGWPRTTAPAVSTPGQEHRYKGSADPMETAGDDAAGRSGMHYLNEGLCATSKGPEGDGGVCGSDRNVTRRSRSGRDTAFGGSTPVSSDRGGGGTAVVEYRLHEFGLLSPLQGFSHWPGFSLNPALWDLARLGGSYRQQYSRKFEFNPADDRFEQRISMELWGAGIAVAHLPDVTFRHVGAGQSAYEAN 1206
            GC VT+ +TTCKR R F  T  GL   L          GDV R   VC+V+VVDD SSP+DR  M ++FP F +++K P   KGHA SMN +L +  T YLLY+EDDW AV D + P     R+ +  A+ VL+++ E + Q   V++NDQS+R CA+     C  D  G  +GWPR      +TPG                                                                                 V YRLH+FG + P   F++WPGF+LNPALWDL  L  ++         F+P D  FE+  S++   AG+ VA+LP VT  H+G  +SAY  N
Sbjct:  972 GCNVTIGVTTCKRRRHFEATMRGLARALAV--------GDVARHGAVCRVVVVDDASSPEDRAAMAAAFPAFDFLYKSPAH-KGHARSMNALLRVVETPYLLYLEDDWLAV-DGAAP-----RDVVGDALAVLEAAAEPLVQ---VLLNDQSSRACAYAARDGC--DAVG-AAGWPR------ATPGG--------------------------------------------------------------------------------VAYRLHDFGTVEPGHAFTYWPGFTLNPALWDLRALACAFFDVLGEAPVFDPDDAEFERSFSLKARDAGLRVAYLPRVTLAHIGVDESAYALN 1224          
BLAST of mRNA_P-littoralis_Contig12.236.1 vs. uniprot
Match: A0A7S3NGS6_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NGS6_9STRA)

HSP 1 Score: 155 bits (392), Expect = 1.600e-37
Identity = 112/361 (31.02%), Postives = 156/361 (43.21%), Query Frame = 1
Query:  145 VTLAITTCKRLRAFLGTAEGLQVLLGPLPQNVADGGDVPRVCQVLVVDDGSSPKDRGLMMSSFPRFTYVFKGPGDVKGHAGSMNLILSLTTTRYLLYVEDDWWAVHDYSLPPRSGVRNFLWRAMEVLKSSTERVSQASHVIINDQSTRNCAWGDTATCTSDIQGTMSGWPRTTAPAVSTPGQEHRYKGSADPMETAGDDAAGRSGMHYLNEGLCATSKGPEGDGGVCGSDRNVTRRSRSGRDTAFGGSTPVSSDRGGGGTAVVEYRLHEFGLLSPLQGFSHWPGFSLNPALWDLARLGGSYRQQYSRKFEFNPADDRFEQRISMELWGAGIAVAHLPDVTFRHVGAGQSAYEANAMRRPWD 1227
            +T+ +TTCKRLR F  T   L  +L P+  N +     P VC+V VVDD SS  D+  M   +P   +V K P   +GHA SMNL++ L  +RY LY+EDDW  ++  +        + L   + VLK +         V++NDQS+R CA+     C +      +GWPR                                     +N+       GP                                            Y LHEFG+L P   F++WPGF+LNPALWDL  L   +         F+  D RFEQ  S++++ AG+ VA+LP V+  H+G  +SAY  N   RPWD
Sbjct:  969 LTIGLTTCKRLRHFQVTMRALSRVLDPV--NASSPLAHPLVCRVYVVDDTSSEFDKLQMAREWPDLDFVHKSP-KFRGHAQSMNLLMRLVESRYFLYLEDDWLTLNHVT------ANHLLDEPLAVLKYAESIGEPLLQVLLNDQSSRGCAYAIPNECPALGS---AGWPR------------------------------------QVND------TGPR-------------------------------------------YSLHEFGILHPNHAFTYWPGFTLNPALWDLYALVQDFSDVGFLPI-FDTEDRRFEQAFSLKVYDAGLMVAYLPRVSLAHIGVDESAYGLNNFTRPWD 1231          
BLAST of mRNA_P-littoralis_Contig12.236.1 vs. uniprot
Match: D7FTI3_ECTSI (Putative methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTI3_ECTSI)

HSP 1 Score: 140 bits (354), Expect = 1.440e-32
Identity = 71/95 (74.74%), Postives = 77/95 (81.05%), Query Frame = 1
Query:   97 WGNEGYEEDDDQGGGCVTLAITTCKRLRAFLGTAEGLQVLLGPLPQNVADGGDV-PRVCQVLVVDDGSSPKDRGLMMSSFPRFTYVFKGPGDVKG 378
            WG  G ++D+D   GCVTLAITTCKRLRAFLGTAEGLQ LLGPLP+    G    PRVCQVLVVDDGSSPKDRG+MMS FP+FTYVFKG GD KG
Sbjct: 1057 WGT-GQDDDEDDDRGCVTLAITTCKRLRAFLGTAEGLQALLGPLPRGEVRGDIAGPRVCQVLVVDDGSSPKDRGVMMSVFPKFTYVFKGAGDAKG 1150          
BLAST of mRNA_P-littoralis_Contig12.236.1 vs. uniprot
Match: A0A067CPZ5_SAPPC (Glyco_transf_41 domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CPZ5_SAPPC)

HSP 1 Score: 127 bits (320), Expect = 3.710e-28
Identity = 107/367 (29.16%), Postives = 148/367 (40.33%), Query Frame = 1
Query:  142 CVTLAITTCKRLRAFLGTAEGLQVLLGPLPQNVADGGDVPRVCQVLVVDDGSSPKDRGLMMSSFPRFTYVFKGPGDVKGHAGSMNLILSLTTTRYLLYVEDDWWAVHDYSLPPRSGVRNFLWRAMEVLKSS-TERVSQASHVIINDQSTRNCAWGDTATCTSDIQGTMSGWPRTTAPAVSTPGQEHRYKGSADPMETAGDDAAGRSGMHYLNEGLCATSKGPEGDGGVCGSDRNVTRRSRSGRDTAFGGSTPVSSDRGGGGTAVVEYRLHEFGLLSPLQGFSHWPGFSLNPALWDLARLGGSYRQQYSRKFEFNPADDRFEQRISMELWGAGIAVAHLPDVTFRHVGA----GQSAYEANAMRRPWD 1227
            CVTL +TTCKRL  FL T   L+ L+             P VC  LV+DD SS  DR +M S+FP   +V+     VKGHA SMN +LSL +TR++LYVEDDW  V        +   + +  A+E+ +S   +  ++ + V++NDQ                     SGW +                                                                            STP  S         V Y++ EFG+  P    +HWPGFSLNPA+WDL RL        +++  F+   D FE+  S+E+  AG+ VA L      H+GA      SAY  N + R +D
Sbjct:  862 CVTLVLTTCKRLSLFLHTMASLRELMAS-----------PLVCATLVIDDHSSEDDRRVMESTFPTVRFVYTR---VKGHAVSMNTLLSLVSTRFVLYVEDDWVFV--------ANATSLVADALEIFQSHWNDPHTRLAQVLLNDQE--------------------SGWLQ----------------------------------------------------------------------------STPSGS---------VSYKVLEFGVADPTHKMAHWPGFSLNPAVWDLDRLK-------AQRLVFDTTSDVFERGFSLEVRRAGLHVAALRQRAAEHIGAPPGSNASAYVLNGLPRRFD 1094          
BLAST of mRNA_P-littoralis_Contig12.236.1 vs. uniprot
Match: A0A3R7AQT5_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7AQT5_9STRA)

HSP 1 Score: 122 bits (305), Expect = 1.490e-27
Identity = 107/363 (29.48%), Postives = 140/363 (38.57%), Query Frame = 1
Query:  142 CVTLAITTCKRLRAFLGTAEGLQVLLGPLPQNVADGGDVPRVCQVLVVDDGSSPKDRGLMMSSFPRFTYVFKGPGDVKGHAGSMNLILSLTTTRYLLYVEDDW-WAVHDYSLPPRSGVRNFLWRAMEVLKSSTERVSQASHVIINDQSTRNCAWGDTATCTSDIQGTMSGWPRTTAPAVSTPGQEHRYKGSADPMETAGDDAAGRSGMHYLNEGLCATSKGPEGDGGVCGSDRNVTRRSRSGRDTAFGGSTPVSSDRGGGGTAVVEYRLHEFGLLSPLQGFSHWPGFSLNPALWDLARLGGSYRQQYSRKFEFNPADDRFEQRISMELWGAGIAVAHLPDVTFRHVGAGQSAYEANAMRRPWD 1227
            CVT+ +TTCKRL  FL T          LP           VC +LV+DD SS  DR +M  +FP   +VF      KGHA S+N +L L TTR++LY+EDDW W   + SLP        L  A+ +L+     V     V++N Q                     SGWPR                                              + P  D                  DT+FG                  Y  HE+G++     F +WPGFSLNP +WDL RL             FN + D FE+  S+ +W  G+ VA LP  T  H+G   SAY  N + R +D
Sbjct:  136 CVTVVVTTCKRLSLFLATMHSF------LPYAATSS-----VCMLLVLDDHSSAADRRVMQDTFPAVEFVFTRQ---KGHAHSLNTMLELVTTRFMLYLEDDWRW---EPSLPHHP-----LAHALAILEHDPTIVQ----VLVNTQ--------------------RSGWPR----------------------------------------------RLPTTD------------------DTSFG-----------------LYFRHEYGVVD--HAFGYWPGFSLNPGVWDLKRLSRC------PALRFNESSDVFEREFSLAVWRCGLHVAMLPYTTAVHIGTNGSAYVLNGLPRRFD 363          
BLAST of mRNA_P-littoralis_Contig12.236.1 vs. uniprot
Match: A0A418BSJ8_9STRA (Uncharacterized protein n=8 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418BSJ8_9STRA)

HSP 1 Score: 122 bits (306), Expect = 4.600e-27
Identity = 107/363 (29.48%), Postives = 140/363 (38.57%), Query Frame = 1
Query:  142 CVTLAITTCKRLRAFLGTAEGLQVLLGPLPQNVADGGDVPRVCQVLVVDDGSSPKDRGLMMSSFPRFTYVFKGPGDVKGHAGSMNLILSLTTTRYLLYVEDDW-WAVHDYSLPPRSGVRNFLWRAMEVLKSSTERVSQASHVIINDQSTRNCAWGDTATCTSDIQGTMSGWPRTTAPAVSTPGQEHRYKGSADPMETAGDDAAGRSGMHYLNEGLCATSKGPEGDGGVCGSDRNVTRRSRSGRDTAFGGSTPVSSDRGGGGTAVVEYRLHEFGLLSPLQGFSHWPGFSLNPALWDLARLGGSYRQQYSRKFEFNPADDRFEQRISMELWGAGIAVAHLPDVTFRHVGAGQSAYEANAMRRPWD 1227
            CVT+ +TTCKRL  FL T          LP           VC +LV+DD SS  DR +M  +FP   +VF      KGHA S+N +L L TTR++LY+EDDW W   + SLP        L  A+ +L+     V     V++N Q                     SGWPR                                              + P  D                  DT+FG                  Y  HE+G++     F +WPGFSLNP +WDL RL             FN + D FE+  S+ +W  G+ VA LP  T  H+G   SAY  N + R +D
Sbjct:  239 CVTVVVTTCKRLSLFLATMHSF------LPYAATSS-----VCMLLVLDDHSSAADRRVMQDTFPAVEFVFTRR---KGHAHSLNTMLELVTTRFMLYLEDDWRW---ELSLPHHP-----LAHALAILEHDPTIVQ----VLVNTQ--------------------RSGWPR----------------------------------------------RLPTTD------------------DTSFG-----------------LYFRHEYGVVD--HAFGYWPGFSLNPGVWDLKRLSRC------PALRFNESSDVFEREFSLAVWRCGLHVAMLPYTTAVHIGTNGSAYVLNGLPRRFD 466          
BLAST of mRNA_P-littoralis_Contig12.236.1 vs. uniprot
Match: A0A3R6ZPX5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6ZPX5_9STRA)

HSP 1 Score: 119 bits (298), Expect = 3.980e-26
Identity = 106/366 (28.96%), Postives = 140/366 (38.25%), Query Frame = 1
Query:  142 CVTLAITTCKRLRAFLGTAEGLQVLLGPLPQNVADGGDVPRVCQVLVVDDGSSPKDRGLMMSSFPRFTYVFKGPGDVKGHAGSMNLILSLTTTRYLLYVEDDWWAVHDYSLPPRSGVRNFLWRAMEVLKSSTERVSQASHVIINDQSTRNCAWGDTATCTSDIQGTMSGWPRTTAPAVSTPGQEHRYKGSADPMETAGDDAAGRSGMHYLNEGLCATSKGPEGDGGVCGSDRNVTRRSRSGRDTAFGGSTPVSSDRGGGGTAVVEYRLHEFGLLSPLQGFSHWPGFSLNPALWDLARLGGSYRQQYSRKFEFNPADDRFEQRISMELWGAGIAVAHLPDVTFRHVGAGQ----SAYEANAMRRPWD 1227
            C+T+A+TTCKRL  FL T +       P   + A       +C +LV+DD SS  DR +M  SFP   +VF      KGHA S+NL+L L +T ++LY+EDDW  + D    P       +  A+ VL S    V     V++N Q                     SGWPRT                                 MH                                        S P              Y  HEFG++     F +WPGFSLNP +W+L RL      +   +  FN   D FE+  S+ +W  G+ VA LP  T  H+GA      SAY  N M R +D
Sbjct:  204 CLTVALTTCKRLSLFLATMKSFL----PYANSTAVA-----ICMILVLDDHSSAADRRVMQESFPTVQFVFTRR---KGHAHSLNLLLDLVSTPFVLYLEDDWQWLQDLPHHP-------IAHALAVLDSDPTLVQ----VLLNTQ--------------------FSGWPRT---------------------------------MHD---------------------------------------SHPFDV-----------YFRHEFGIVD--HAFGYWPGFSLNPGVWNLRRL------RQCPRLTFNERSDVFEREFSLAVWQCGLHVAMLPYTTAVHIGAAPGTNGSAYALNGMPRRFD 435          
BLAST of mRNA_P-littoralis_Contig12.236.1 vs. uniprot
Match: W4GAE9_9STRA (Glyco_transf_41 domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GAE9_9STRA)

HSP 1 Score: 119 bits (299), Expect = 1.990e-25
Identity = 104/363 (28.65%), Postives = 137/363 (37.74%), Query Frame = 1
Query:  142 CVTLAITTCKRLRAFLGTAEGLQVLLGPLPQNVADGGDVPRVCQVLVVDDGSSPKDRGLMMSSFPRFTYVFKGPGDVKGHAGSMNLILSLTTTRYLLYVEDDW-WAVHDYSLPPRSGVRNFLWRAMEVLKSSTERVSQASHVIINDQSTRNCAWGDTATCTSDIQGTMSGWPRTTAPAVSTPGQEHRYKGSADPMETAGDDAAGRSGMHYLNEGLCATSKGPEGDGGVCGSDRNVTRRSRSGRDTAFGGSTPVSSDRGGGGTAVVEYRLHEFGLLSPLQGFSHWPGFSLNPALWDLARLGGSYRQQYSRKFEFNPADDRFEQRISMELWGAGIAVAHLPDVTFRHVGAGQSAYEANAMRRPWD 1227
            CVT+ +TTCKRL  FL T          LP           VC +LV+DD SS  DR +M  +FP   +VF      KGHA S+N +L L TTR++LY+EDDW W   + SLP        L  A+ +L+     V     V++N Q                     SGWPR                     + T  D + G                                                              Y  HE+G++     F +WPGFSLNP +WDL RL             FN + D FE+  S+ +W  G+ VA LP  T  H+G   SAY  N + R +D
Sbjct:  968 CVTVVVTTCKRLSLFLATMHSF------LPYAATSS-----VCMLLVLDDHSSAADRRVMQDTFPAVEFVFTRR---KGHAHSLNTMLELVTTRFMLYLEDDWRW---EPSLPHHP-----LAHALAILEHDPTIVQ----VLVNTQ--------------------HSGWPRR--------------------LPTTDDSSFGL-------------------------------------------------------------YFRHEYGVVD--HAFGYWPGFSLNPGVWDLKRLSRC------PALRFNESSDVFEREFSLAVWRCGLHVAMLPYTTAVHIGTNGSAYVLNGLPRRFD 1195          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig12.236.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4A7X0_9STRA1.400e-4835.08Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A7S4SZ12_9STRA2.940e-4733.52Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
F0XYF1_AURAN9.760e-4334.44Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S3NGS6_9STRA1.600e-3731.02Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
D7FTI3_ECTSI1.440e-3274.74Putative methyltransferase n=1 Tax=Ectocarpus sili... [more]
A0A067CPZ5_SAPPC3.710e-2829.16Glyco_transf_41 domain-containing protein n=1 Tax=... [more]
A0A3R7AQT5_9STRA1.490e-2729.48Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A418BSJ8_9STRA4.600e-2729.48Uncharacterized protein n=8 Tax=Aphanomyces astaci... [more]
A0A3R6ZPX5_9STRA3.980e-2628.96Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
W4GAE9_9STRA1.990e-2528.65Glyco_transf_41 domain-containing protein n=3 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig12contigP-littoralis_Contig12:1015086..1018374 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog44056.XP_009033262.1
PFAMsCHAT,Glyco_trans_1_4,Glyco_transf_41,Glycos_transf_2,TPR_2,TPR_7,TPR_8
Model size1232
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons5
Evalue1.6e-43
EggNOG OGsCOG3914@1|root,KOG4626@2759|Eukaryota
Descriptionprotein N-acetylglucosaminyltransferase activity
Cds size1230
COG categoryO
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789513.0444095-CDS-P-littoralis_Contig12:1015085..10152211680789513.0444095-CDS-P-littoralis_Contig12:1015085..1015221Pylaiella littoralis U1_48CDSP-littoralis_Contig12 1015086..1015221 -
1680789513.0593863-CDS-P-littoralis_Contig12:1015887..10164201680789513.0593863-CDS-P-littoralis_Contig12:1015887..1016420Pylaiella littoralis U1_48CDSP-littoralis_Contig12 1015888..1016420 -
1680789513.0713255-CDS-P-littoralis_Contig12:1016957..10171421680789513.0713255-CDS-P-littoralis_Contig12:1016957..1017142Pylaiella littoralis U1_48CDSP-littoralis_Contig12 1016958..1017142 -
1680789513.0832067-CDS-P-littoralis_Contig12:1017527..10176931680789513.0832067-CDS-P-littoralis_Contig12:1017527..1017693Pylaiella littoralis U1_48CDSP-littoralis_Contig12 1017528..1017693 -
1680789513.0958452-CDS-P-littoralis_Contig12:1018164..10183741680789513.0958452-CDS-P-littoralis_Contig12:1018164..1018374Pylaiella littoralis U1_48CDSP-littoralis_Contig12 1018165..1018374 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig12.236.1prot_P-littoralis_Contig12.236.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig12 1015086..1018374 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig12.236.1

>prot_P-littoralis_Contig12.236.1 ID=prot_P-littoralis_Contig12.236.1|Name=mRNA_P-littoralis_Contig12.236.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=410bp
TSEELRGEKQRGSDGFNGGLGDDGDSGIPHFDWGNEGYEEDDDQGGGCVT
LAITTCKRLRAFLGTAEGLQVLLGPLPQNVADGGDVPRVCQVLVVDDGSS
PKDRGLMMSSFPRFTYVFKGPGDVKGHAGSMNLILSLTTTRYLLYVEDDW
WAVHDYSLPPRSGVRNFLWRAMEVLKSSTERVSQASHVIINDQSTRNCAW
GDTATCTSDIQGTMSGWPRTTAPAVSTPGQEHRYKGSADPMETAGDDAAG
RSGMHYLNEGLCATSKGPEGDGGVCGSDRNVTRRSRSGRDTAFGGSTPVS
SDRGGGGTAVVEYRLHEFGLLSPLQGFSHWPGFSLNPALWDLARLGGSYR
QQYSRKFEFNPADDRFEQRISMELWGAGIAVAHLPDVTFRHVGAGQSAYE
ANAMRRPWD*
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mRNA from alignment at P-littoralis_Contig12:1015086..1018374-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig12.236.1 ID=mRNA_P-littoralis_Contig12.236.1|Name=mRNA_P-littoralis_Contig12.236.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3289bp|location=Sequence derived from alignment at P-littoralis_Contig12:1015086..1018374- (Pylaiella littoralis U1_48)
ACATCCGAAGAGCTCCGGGGGGAAAAGCAGAGGGGTAGCGACGGTTTTAA CGGTGGTCTTGGCGATGATGGTGATAGTGGAATCCCGCATTTTGACTGGG GAAACGAAGGCTACGAGGAAGACGACGACCAAGGTGGAGGGTGCGTCACG CTCGCCATTACGACGTGCAAGAGGCTCCGAGCCTTTCTGGGGACGGCCGA GGGTCTGCAGGCACGTTGTTTATTTTATTTTTGCCTCTCGTAGATTATGG CCCACTTTCCAACACATGCTGCTCCGAGATTTTTCCTCTGCGTTTTTCCT TATATATTGGATAACCCTAAGTATCATATGACAGTAAAAAATGGTCACTA CACGAATTCGCCGAATCCTACCTTTAGCAAACAAGTATAGGGGCATCATC ACCTCAAACTTCACGGTTTTTTTGTTGGTTGTGCTCCAACTCGTTCATGA TGGAGGGGGGGGGGCGGAGGCTTCGAGAGTACCGGGCAACGAAATTACAC AAACGTAAATTGAAGCCAACGCGTGCCAAGGCTGTCAGCCTACTCCGACT AGCCTACGTTCGGAGTGGAAAATTGAGATACGAAACAGCCTTCTCAAACC ATACCCCCCCTCCCTCCAAGAGCAACCATATACTTCGTATTTCTTGACGC AAGCACGTATCTGATGCTTTGCTAAACTCAGGTTCTGCTCGGCCCTCTTC CGCAAAATGTGGCGGATGGAGGTGATGTCCCGAGGGTGTGCCAAGTGCTG GTCGTCGACGACGGGAGCTCTCCGAAAGACCGCGGCCTCATGATGTCGTC TTTTCCGCGCTTTACGTACGTCTTCAAGGGACCAGGAGATGTCAAAGGTA CGATAGCCGATTCATCATTGCAGACAATGTGGCTGCCCGCGGGGCTAGCA ATTTGTGTGTATGTCTCATGTGATAGCGTCCACTTTTGAGATGCACGATG CGCGATGGAGATGTACGGCAGGTGAGGCAAAGTGGCTCCTATTTCAAAGA TGGCCGTGGAGTGGGGGGTTCCTCCGGGCTCGACAAGACCGCGTCGTACT GAAAAGTGTTCCGCTTCAACGAAAGCCCCTGCATAGCGTCACGATACATC TCGGTTGTGTCGGCGCCTGCTCAAACTTAGCCAGCCCCACGGTGGTCCGT CTCTTTCTTCTGCGGCGGATATATGTGAAATTCAAGGCTCTCGAACTGTT ATTGTTACGCTGCTGCCCCCCCCCCCCGACAGGACACGCAGGTTCGATGA ACCTCATTTTGTCTCTGACCACGACACGATATCTGCTGTACGTGGAGGAC GACTGGTGGGCTGTTCACGATTATTCGCTGCCTCCCCGCTCGGGCGTGAG AAACTTCTTGTGGCGTGCGATGGAGGTGCTGAAATCGTCCACCGAACGGG TCTCGCAGGCAAGCCATGTCATCCATCGGCCCCGGGTGTTTGCTCCGCTG GCATGGCGAGCCTTTTTTATGGGCGAGGACTGTGTGTGCACAAAGATAAA CAAAGGTTTTGAGTAAGCAGCACGCGTGTTGTGCGTGTTTTCGGCGTGAT TATCCTGTCGTGCCGAATCCTACCGCTACATATAATAACTGGCTTTCTGA ACTTTCGCCAGCGCATGGATTACAGGACTGACATATTTCTCAACCATTTG TCTCGAATCACGCTGCACAGCTGGTTCCGAGACCCGGTCACCCGCGCTCG TTCCAGGCAGGCCATATCCAGTCAAATGTCGACAGCAGTTCATGATTGTT GTCTAAACAAGGTGGATGACTCCCGCCCTACAAAGTAGTATTATTTGACC CCCTCCACCCCGTCAAGCGTTGGTGACTCTGTTGAGAGTAAGAACGGTGC CCCGTCTTGACAGGGATGCGAGTTCGGTGGACGAACGGCGATGGCAGGCA ACACAATAACACGCCCCCAACTCCCCCCAATCCCTCCCCCAACACCACCC ACAGGTCATAATAAACGACCAGTCCACGAGAAACTGCGCTTGGGGTGATA CGGCCACTTGTACTTCAGATATACAGGGAACTATGTCGGGTTGGCCGCGT ACTACGGCCCCCGCTGTCTCAACGCCAGGCCAGGAGCACCGCTACAAAGG CTCCGCAGATCCAATGGAGACAGCGGGCGACGACGCAGCCGGCCGTAGCG GTATGCACTATCTGAACGAGGGATTGTGCGCCACCAGCAAAGGCCCCGAG GGTGATGGGGGCGTTTGCGGGAGCGATAGAAATGTGACGCGGAGGTCACG GTCAGGCCGCGACACCGCCTTCGGCGGCAGCACACCCGTCTCAAGCGACC GGGGGGGGGGAGGCACAGCAGTGGTAGAGTATCGCCTGCATGAGTTCGGG CTGCTGTCACCGTTGCAAGGCTTCTCCCACTGGCCTGGGTTTTCCTTGAA CCCAGCGCTGTGGGATCTTGCGCGGCTTGGGGGCAGCTATCGACAACAGT ACAGCCGAAAGTTCGAGTTCAACCCTGCGGATGACAGGTCAGGCTCATGT ATGACACTTACAACGTAGACCAACGGAGTGATTCGTTCTCTTCCGGATGA TGTGCAGATACGCGAGGAACGCCCATACGTGAGGAACGCCCTTTGTAGCT CACCTCTCCAACGCAACAGCTTTTTATTGGCCGAGCGGGCATCATGGTAG TACTCGAGGCGATACTGCTGTACGTAGCGTTTCACCGCCTGACAAGATTT TCCACCGGCTTGTGGCCCTTACAGAATGCCTCCTGTTGGCAGGCGAAGCG TCGGGGCGTGTGTGTCTGTGCGTCGGACCAACAAGCACGTTTGCCCCCGG GATTAAAAAAAGTCTGCTCGGTCGATGGGCGTCTTGTCGAACGTCTTGGT TACAATTCACCCACGCGATCTTGTTTTTGATCCTTCAGTTCGATTTCTGG AATCACATAAGATTGATGCATACGAAACGTGCGTTTTTCTCCCTGGCCTC CACTTACCCATTCACCGTCCATCCCGCCGCTGAGAGAACACCAGGTGACG CAAACCGGCCCAACCCGAACCGAAAACACACCGCCGTTGTTTTCAACACA ATGTCAGCCCAGTACAGTAGTACACAAACAAACGAGCAACCCATCACACT GAACAGTGTGTCAACCCCCTCCCCGCCCTCCCAACCCATGATCACTCACT CAGATTCGAGCAACGTATTTCTATGGAGCTTTGGGGTGCGGGCATTGCCG TTGCGCATCTTCCAGACGTAACGTTTCGACACGTCGGAGCTGGCCAATCA GCGTACGAGGCCAACGCCATGCGAAGGCCGTGGGACTAA
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Coding sequence (CDS) from alignment at P-littoralis_Contig12:1015086..1018374-

>mRNA_P-littoralis_Contig12.236.1 ID=mRNA_P-littoralis_Contig12.236.1|Name=mRNA_P-littoralis_Contig12.236.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1230bp|location=Sequence derived from alignment at P-littoralis_Contig12:1015086..1018374- (Pylaiella littoralis U1_48)
ACATCCGAAGAGCTCCGGGGGGAAAAGCAGAGGGGTAGCGACGGTTTTAA
CGGTGGTCTTGGCGATGATGGTGATAGTGGAATCCCGCATTTTGACTGGG
GAAACGAAGGCTACGAGGAAGACGACGACCAAGGTGGAGGGTGCGTCACG
CTCGCCATTACGACGTGCAAGAGGCTCCGAGCCTTTCTGGGGACGGCCGA
GGGTCTGCAGGTTCTGCTCGGCCCTCTTCCGCAAAATGTGGCGGATGGAG
GTGATGTCCCGAGGGTGTGCCAAGTGCTGGTCGTCGACGACGGGAGCTCT
CCGAAAGACCGCGGCCTCATGATGTCGTCTTTTCCGCGCTTTACGTACGT
CTTCAAGGGACCAGGAGATGTCAAAGGACACGCAGGTTCGATGAACCTCA
TTTTGTCTCTGACCACGACACGATATCTGCTGTACGTGGAGGACGACTGG
TGGGCTGTTCACGATTATTCGCTGCCTCCCCGCTCGGGCGTGAGAAACTT
CTTGTGGCGTGCGATGGAGGTGCTGAAATCGTCCACCGAACGGGTCTCGC
AGGCAAGCCATGTCATAATAAACGACCAGTCCACGAGAAACTGCGCTTGG
GGTGATACGGCCACTTGTACTTCAGATATACAGGGAACTATGTCGGGTTG
GCCGCGTACTACGGCCCCCGCTGTCTCAACGCCAGGCCAGGAGCACCGCT
ACAAAGGCTCCGCAGATCCAATGGAGACAGCGGGCGACGACGCAGCCGGC
CGTAGCGGTATGCACTATCTGAACGAGGGATTGTGCGCCACCAGCAAAGG
CCCCGAGGGTGATGGGGGCGTTTGCGGGAGCGATAGAAATGTGACGCGGA
GGTCACGGTCAGGCCGCGACACCGCCTTCGGCGGCAGCACACCCGTCTCA
AGCGACCGGGGGGGGGGAGGCACAGCAGTGGTAGAGTATCGCCTGCATGA
GTTCGGGCTGCTGTCACCGTTGCAAGGCTTCTCCCACTGGCCTGGGTTTT
CCTTGAACCCAGCGCTGTGGGATCTTGCGCGGCTTGGGGGCAGCTATCGA
CAACAGTACAGCCGAAAGTTCGAGTTCAACCCTGCGGATGACAGATTCGA
GCAACGTATTTCTATGGAGCTTTGGGGTGCGGGCATTGCCGTTGCGCATC
TTCCAGACGTAACGTTTCGACACGTCGGAGCTGGCCAATCAGCGTACGAG
GCCAACGCCATGCGAAGGCCGTGGGACTAA
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