mRNA_P-littoralis_Contig12.236.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig12.236.1 vs. uniprot
Match: A0A7S4A7X0_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A7X0_9STRA) HSP 1 Score: 187 bits (476), Expect = 1.400e-48 Identity = 127/362 (35.08%), Postives = 171/362 (47.24%), Query Frame = 1
Query: 145 VTLAITTCKRLRAFLGTAEGL-QVLLGPLPQNVADGGDVPRVCQVLVVDDGSSPKDRGLMMSSFPRFTYVFKGPGDVKGHAGSMNLILSLTTTRYLLYVEDDWWAVHDYSLPPRSGVRNFLWRAMEVLKSSTERVSQASHVIINDQSTRNCAWGDTATCTSDIQGTMSGWPRTTAPAVSTPGQEHRYKGSADPMETAGDDAAGRSGMHYLNEGLCATSKGPEGDGGVCGSDRNVTRRSRSGRDTAFGGSTPVSSDRGGGGTAVVEYRLHEFGLLSPLQGFSHWPGFSLNPALWDLARLGGSYRQQYSRKFEFNPADDRFEQRISMELWGAGIAVAHLPDVTFRHVGAGQSAYEANAMRRPWD 1227
VT+ +TTCKRLR F T +GL +V G L D P VC+V+V+DDGSS DR MM FPR +V K + KGHA SMNL+LS+ T YLLY+EDDW A+ S V + L A+ VL+++ E V++NDQS+R+CA+ C + G +GWPR T+ DG + YRLH++G + P F++WPGFSLNPALWD+ RL ++ + + FN D RFEQ S++ + AGI VA+LP V+F H G Q+AY N RP+D
Sbjct: 1013 VTVGLTTCKRLRHFRLTMQGLIRVFQGDLV-------DHPLVCRVVVIDDGSSEGDRLDMMREFPRVDFVLKNNEEHKGHARSMNLLLSMVQTPYLLYMEDDWLALDHVS------VTHVLDEALSVLRAAHEE-EPVVEVLLNDQSSRSCAYAAEEGC--PMLG-KAGWPRVTS------------------------------------------------DG--------------------------------------IAYRLHDYGTVEPGHAFTYWPGFSLNPALWDVRRLQCAFSESFGEPPVFNSTDARFEQSFSLKAYDAGIRVAYLPRVSFAHTGVDQTAYALNNFTRPFD 1271
BLAST of mRNA_P-littoralis_Contig12.236.1 vs. uniprot
Match: A0A7S4SZ12_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4SZ12_9STRA) HSP 1 Score: 171 bits (433), Expect = 2.940e-47 Identity = 118/352 (33.52%), Postives = 159/352 (45.17%), Query Frame = 1
Query: 175 LRAFLGTAEGLQVLLGPLPQNVADGGDVPRVCQVLVVDDGSSPKDRGLMMSSFPRFTYVFKGPGDVKGHAGSMNLILSLTTTRYLLYVEDDWWAVHDYSLPPRSGVRNFLWRAMEVLKSSTERVSQASHVIINDQSTRNCAWGDTAT-CTSDIQGTMSGWPRTTAPAVSTPGQEHRYKGSADPMETAGDDAAGRSGMHYLNEGLCATSKGPEGDGGVCGSDRNVTRRSRSGRDTAFGGSTPVSSDRGGGGTAVVEYRLHEFGLLSPLQGFSHWPGFSLNPALWDLARLGGSYRQQYSRKFEFNPADDRFEQRISMELWGAGIAVAHLPDVTFRHVGAGQSAYEANAMRRPWD 1227
L+ FL T + LQ + + + +C VLVVDD SS +DR MM +FP FTY+FK PG KGHA S+NLIL++ TRYLLY+EDDW + + + + AM VL++ E + + V++NDQS+R+CA GD T CT + +GW R + F G T V Y HEFG++ P FS+WPGFSLNPA+WDL RL F+ D FEQ S++ AG+ AHLP + FRH+G G S+Y N+ +RPWD
Sbjct: 1 LQLFLETVQSLQ---NAFAERLLES---KMICDVLVVDDSSSEEDRRTMMRTFPEFTYIFK-PGRDKGHASSLNLILNVIKTRYLLYIEDDWKTI--------ANTVDMITDAMIVLRAPVE--NPIAQVLLNDQSSRSCAHGDNITSCTKNKYYGKAGWKR----------------------------------------------------------------------EALFDGQT-------------VPYIEHEFGVVYPEHTFSYWPGFSLNPAIWDLDRLHSKMNVL------FDEEDITFEQTFSLKAMDAGLTFAHLPQINFRHIGQGISSYVLNSKQRPWD 246
BLAST of mRNA_P-littoralis_Contig12.236.1 vs. uniprot
Match: F0XYF1_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XYF1_AURAN) HSP 1 Score: 171 bits (432), Expect = 9.760e-43 Identity = 124/360 (34.44%), Postives = 166/360 (46.11%), Query Frame = 1
Query: 139 GC-VTLAITTCKRLRAFLGTAEGLQVLLGPLPQNVADGGDVPR---VCQVLVVDDGSSPKDRGLMMSSFPRFTYVFKGPGDVKGHAGSMNLILSLTTTRYLLYVEDDWWAVHDYSLPPRSGVRNFLWRAMEVLKSSTERVSQASHVIINDQSTRNCAWGDTATCTSDIQGTMSGWPRTTAPAVSTPGQEHRYKGSADPMETAGDDAAGRSGMHYLNEGLCATSKGPEGDGGVCGSDRNVTRRSRSGRDTAFGGSTPVSSDRGGGGTAVVEYRLHEFGLLSPLQGFSHWPGFSLNPALWDLARLGGSYRQQYSRKFEFNPADDRFEQRISMELWGAGIAVAHLPDVTFRHVGAGQSAYEAN 1206
GC VT+ +TTCKR R F T GL L GDV R VC+V+VVDD SSP+DR M ++FP F +++K P KGHA SMN +L + T YLLY+EDDW AV D + P R+ + A+ VL+++ E + Q V++NDQS+R CA+ C D G +GWPR +TPG V YRLH+FG + P F++WPGF+LNPALWDL L ++ F+P D FE+ S++ AG+ VA+LP VT H+G +SAY N
Sbjct: 972 GCNVTIGVTTCKRRRHFEATMRGLARALAV--------GDVARHGAVCRVVVVDDASSPEDRAAMAAAFPAFDFLYKSPAH-KGHARSMNALLRVVETPYLLYLEDDWLAV-DGAAP-----RDVVGDALAVLEAAAEPLVQ---VLLNDQSSRACAYAARDGC--DAVG-AAGWPR------ATPGG--------------------------------------------------------------------------------VAYRLHDFGTVEPGHAFTYWPGFTLNPALWDLRALACAFFDVLGEAPVFDPDDAEFERSFSLKARDAGLRVAYLPRVTLAHIGVDESAYALN 1224
BLAST of mRNA_P-littoralis_Contig12.236.1 vs. uniprot
Match: A0A7S3NGS6_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NGS6_9STRA) HSP 1 Score: 155 bits (392), Expect = 1.600e-37 Identity = 112/361 (31.02%), Postives = 156/361 (43.21%), Query Frame = 1
Query: 145 VTLAITTCKRLRAFLGTAEGLQVLLGPLPQNVADGGDVPRVCQVLVVDDGSSPKDRGLMMSSFPRFTYVFKGPGDVKGHAGSMNLILSLTTTRYLLYVEDDWWAVHDYSLPPRSGVRNFLWRAMEVLKSSTERVSQASHVIINDQSTRNCAWGDTATCTSDIQGTMSGWPRTTAPAVSTPGQEHRYKGSADPMETAGDDAAGRSGMHYLNEGLCATSKGPEGDGGVCGSDRNVTRRSRSGRDTAFGGSTPVSSDRGGGGTAVVEYRLHEFGLLSPLQGFSHWPGFSLNPALWDLARLGGSYRQQYSRKFEFNPADDRFEQRISMELWGAGIAVAHLPDVTFRHVGAGQSAYEANAMRRPWD 1227
+T+ +TTCKRLR F T L +L P+ N + P VC+V VVDD SS D+ M +P +V K P +GHA SMNL++ L +RY LY+EDDW ++ + + L + VLK + V++NDQS+R CA+ C + +GWPR +N+ GP Y LHEFG+L P F++WPGF+LNPALWDL L + F+ D RFEQ S++++ AG+ VA+LP V+ H+G +SAY N RPWD
Sbjct: 969 LTIGLTTCKRLRHFQVTMRALSRVLDPV--NASSPLAHPLVCRVYVVDDTSSEFDKLQMAREWPDLDFVHKSP-KFRGHAQSMNLLMRLVESRYFLYLEDDWLTLNHVT------ANHLLDEPLAVLKYAESIGEPLLQVLLNDQSSRGCAYAIPNECPALGS---AGWPR------------------------------------QVND------TGPR-------------------------------------------YSLHEFGILHPNHAFTYWPGFTLNPALWDLYALVQDFSDVGFLPI-FDTEDRRFEQAFSLKVYDAGLMVAYLPRVSLAHIGVDESAYGLNNFTRPWD 1231
BLAST of mRNA_P-littoralis_Contig12.236.1 vs. uniprot
Match: D7FTI3_ECTSI (Putative methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTI3_ECTSI) HSP 1 Score: 140 bits (354), Expect = 1.440e-32 Identity = 71/95 (74.74%), Postives = 77/95 (81.05%), Query Frame = 1
Query: 97 WGNEGYEEDDDQGGGCVTLAITTCKRLRAFLGTAEGLQVLLGPLPQNVADGGDV-PRVCQVLVVDDGSSPKDRGLMMSSFPRFTYVFKGPGDVKG 378
WG G ++D+D GCVTLAITTCKRLRAFLGTAEGLQ LLGPLP+ G PRVCQVLVVDDGSSPKDRG+MMS FP+FTYVFKG GD KG
Sbjct: 1057 WGT-GQDDDEDDDRGCVTLAITTCKRLRAFLGTAEGLQALLGPLPRGEVRGDIAGPRVCQVLVVDDGSSPKDRGVMMSVFPKFTYVFKGAGDAKG 1150
BLAST of mRNA_P-littoralis_Contig12.236.1 vs. uniprot
Match: A0A067CPZ5_SAPPC (Glyco_transf_41 domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CPZ5_SAPPC) HSP 1 Score: 127 bits (320), Expect = 3.710e-28 Identity = 107/367 (29.16%), Postives = 148/367 (40.33%), Query Frame = 1
Query: 142 CVTLAITTCKRLRAFLGTAEGLQVLLGPLPQNVADGGDVPRVCQVLVVDDGSSPKDRGLMMSSFPRFTYVFKGPGDVKGHAGSMNLILSLTTTRYLLYVEDDWWAVHDYSLPPRSGVRNFLWRAMEVLKSS-TERVSQASHVIINDQSTRNCAWGDTATCTSDIQGTMSGWPRTTAPAVSTPGQEHRYKGSADPMETAGDDAAGRSGMHYLNEGLCATSKGPEGDGGVCGSDRNVTRRSRSGRDTAFGGSTPVSSDRGGGGTAVVEYRLHEFGLLSPLQGFSHWPGFSLNPALWDLARLGGSYRQQYSRKFEFNPADDRFEQRISMELWGAGIAVAHLPDVTFRHVGA----GQSAYEANAMRRPWD 1227
CVTL +TTCKRL FL T L+ L+ P VC LV+DD SS DR +M S+FP +V+ VKGHA SMN +LSL +TR++LYVEDDW V + + + A+E+ +S + ++ + V++NDQ SGW + STP S V Y++ EFG+ P +HWPGFSLNPA+WDL RL +++ F+ D FE+ S+E+ AG+ VA L H+GA SAY N + R +D
Sbjct: 862 CVTLVLTTCKRLSLFLHTMASLRELMAS-----------PLVCATLVIDDHSSEDDRRVMESTFPTVRFVYTR---VKGHAVSMNTLLSLVSTRFVLYVEDDWVFV--------ANATSLVADALEIFQSHWNDPHTRLAQVLLNDQE--------------------SGWLQ----------------------------------------------------------------------------STPSGS---------VSYKVLEFGVADPTHKMAHWPGFSLNPAVWDLDRLK-------AQRLVFDTTSDVFERGFSLEVRRAGLHVAALRQRAAEHIGAPPGSNASAYVLNGLPRRFD 1094
BLAST of mRNA_P-littoralis_Contig12.236.1 vs. uniprot
Match: A0A3R7AQT5_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7AQT5_9STRA) HSP 1 Score: 122 bits (305), Expect = 1.490e-27 Identity = 107/363 (29.48%), Postives = 140/363 (38.57%), Query Frame = 1
Query: 142 CVTLAITTCKRLRAFLGTAEGLQVLLGPLPQNVADGGDVPRVCQVLVVDDGSSPKDRGLMMSSFPRFTYVFKGPGDVKGHAGSMNLILSLTTTRYLLYVEDDW-WAVHDYSLPPRSGVRNFLWRAMEVLKSSTERVSQASHVIINDQSTRNCAWGDTATCTSDIQGTMSGWPRTTAPAVSTPGQEHRYKGSADPMETAGDDAAGRSGMHYLNEGLCATSKGPEGDGGVCGSDRNVTRRSRSGRDTAFGGSTPVSSDRGGGGTAVVEYRLHEFGLLSPLQGFSHWPGFSLNPALWDLARLGGSYRQQYSRKFEFNPADDRFEQRISMELWGAGIAVAHLPDVTFRHVGAGQSAYEANAMRRPWD 1227
CVT+ +TTCKRL FL T LP VC +LV+DD SS DR +M +FP +VF KGHA S+N +L L TTR++LY+EDDW W + SLP L A+ +L+ V V++N Q SGWPR + P D DT+FG Y HE+G++ F +WPGFSLNP +WDL RL FN + D FE+ S+ +W G+ VA LP T H+G SAY N + R +D
Sbjct: 136 CVTVVVTTCKRLSLFLATMHSF------LPYAATSS-----VCMLLVLDDHSSAADRRVMQDTFPAVEFVFTRQ---KGHAHSLNTMLELVTTRFMLYLEDDWRW---EPSLPHHP-----LAHALAILEHDPTIVQ----VLVNTQ--------------------RSGWPR----------------------------------------------RLPTTD------------------DTSFG-----------------LYFRHEYGVVD--HAFGYWPGFSLNPGVWDLKRLSRC------PALRFNESSDVFEREFSLAVWRCGLHVAMLPYTTAVHIGTNGSAYVLNGLPRRFD 363
BLAST of mRNA_P-littoralis_Contig12.236.1 vs. uniprot
Match: A0A418BSJ8_9STRA (Uncharacterized protein n=8 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418BSJ8_9STRA) HSP 1 Score: 122 bits (306), Expect = 4.600e-27 Identity = 107/363 (29.48%), Postives = 140/363 (38.57%), Query Frame = 1
Query: 142 CVTLAITTCKRLRAFLGTAEGLQVLLGPLPQNVADGGDVPRVCQVLVVDDGSSPKDRGLMMSSFPRFTYVFKGPGDVKGHAGSMNLILSLTTTRYLLYVEDDW-WAVHDYSLPPRSGVRNFLWRAMEVLKSSTERVSQASHVIINDQSTRNCAWGDTATCTSDIQGTMSGWPRTTAPAVSTPGQEHRYKGSADPMETAGDDAAGRSGMHYLNEGLCATSKGPEGDGGVCGSDRNVTRRSRSGRDTAFGGSTPVSSDRGGGGTAVVEYRLHEFGLLSPLQGFSHWPGFSLNPALWDLARLGGSYRQQYSRKFEFNPADDRFEQRISMELWGAGIAVAHLPDVTFRHVGAGQSAYEANAMRRPWD 1227
CVT+ +TTCKRL FL T LP VC +LV+DD SS DR +M +FP +VF KGHA S+N +L L TTR++LY+EDDW W + SLP L A+ +L+ V V++N Q SGWPR + P D DT+FG Y HE+G++ F +WPGFSLNP +WDL RL FN + D FE+ S+ +W G+ VA LP T H+G SAY N + R +D
Sbjct: 239 CVTVVVTTCKRLSLFLATMHSF------LPYAATSS-----VCMLLVLDDHSSAADRRVMQDTFPAVEFVFTRR---KGHAHSLNTMLELVTTRFMLYLEDDWRW---ELSLPHHP-----LAHALAILEHDPTIVQ----VLVNTQ--------------------RSGWPR----------------------------------------------RLPTTD------------------DTSFG-----------------LYFRHEYGVVD--HAFGYWPGFSLNPGVWDLKRLSRC------PALRFNESSDVFEREFSLAVWRCGLHVAMLPYTTAVHIGTNGSAYVLNGLPRRFD 466
BLAST of mRNA_P-littoralis_Contig12.236.1 vs. uniprot
Match: A0A3R6ZPX5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6ZPX5_9STRA) HSP 1 Score: 119 bits (298), Expect = 3.980e-26 Identity = 106/366 (28.96%), Postives = 140/366 (38.25%), Query Frame = 1
Query: 142 CVTLAITTCKRLRAFLGTAEGLQVLLGPLPQNVADGGDVPRVCQVLVVDDGSSPKDRGLMMSSFPRFTYVFKGPGDVKGHAGSMNLILSLTTTRYLLYVEDDWWAVHDYSLPPRSGVRNFLWRAMEVLKSSTERVSQASHVIINDQSTRNCAWGDTATCTSDIQGTMSGWPRTTAPAVSTPGQEHRYKGSADPMETAGDDAAGRSGMHYLNEGLCATSKGPEGDGGVCGSDRNVTRRSRSGRDTAFGGSTPVSSDRGGGGTAVVEYRLHEFGLLSPLQGFSHWPGFSLNPALWDLARLGGSYRQQYSRKFEFNPADDRFEQRISMELWGAGIAVAHLPDVTFRHVGAGQ----SAYEANAMRRPWD 1227
C+T+A+TTCKRL FL T + P + A +C +LV+DD SS DR +M SFP +VF KGHA S+NL+L L +T ++LY+EDDW + D P + A+ VL S V V++N Q SGWPRT MH S P Y HEFG++ F +WPGFSLNP +W+L RL + + FN D FE+ S+ +W G+ VA LP T H+GA SAY N M R +D
Sbjct: 204 CLTVALTTCKRLSLFLATMKSFL----PYANSTAVA-----ICMILVLDDHSSAADRRVMQESFPTVQFVFTRR---KGHAHSLNLLLDLVSTPFVLYLEDDWQWLQDLPHHP-------IAHALAVLDSDPTLVQ----VLLNTQ--------------------FSGWPRT---------------------------------MHD---------------------------------------SHPFDV-----------YFRHEFGIVD--HAFGYWPGFSLNPGVWNLRRL------RQCPRLTFNERSDVFEREFSLAVWQCGLHVAMLPYTTAVHIGAAPGTNGSAYALNGMPRRFD 435
BLAST of mRNA_P-littoralis_Contig12.236.1 vs. uniprot
Match: W4GAE9_9STRA (Glyco_transf_41 domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GAE9_9STRA) HSP 1 Score: 119 bits (299), Expect = 1.990e-25 Identity = 104/363 (28.65%), Postives = 137/363 (37.74%), Query Frame = 1
Query: 142 CVTLAITTCKRLRAFLGTAEGLQVLLGPLPQNVADGGDVPRVCQVLVVDDGSSPKDRGLMMSSFPRFTYVFKGPGDVKGHAGSMNLILSLTTTRYLLYVEDDW-WAVHDYSLPPRSGVRNFLWRAMEVLKSSTERVSQASHVIINDQSTRNCAWGDTATCTSDIQGTMSGWPRTTAPAVSTPGQEHRYKGSADPMETAGDDAAGRSGMHYLNEGLCATSKGPEGDGGVCGSDRNVTRRSRSGRDTAFGGSTPVSSDRGGGGTAVVEYRLHEFGLLSPLQGFSHWPGFSLNPALWDLARLGGSYRQQYSRKFEFNPADDRFEQRISMELWGAGIAVAHLPDVTFRHVGAGQSAYEANAMRRPWD 1227
CVT+ +TTCKRL FL T LP VC +LV+DD SS DR +M +FP +VF KGHA S+N +L L TTR++LY+EDDW W + SLP L A+ +L+ V V++N Q SGWPR + T D + G Y HE+G++ F +WPGFSLNP +WDL RL FN + D FE+ S+ +W G+ VA LP T H+G SAY N + R +D
Sbjct: 968 CVTVVVTTCKRLSLFLATMHSF------LPYAATSS-----VCMLLVLDDHSSAADRRVMQDTFPAVEFVFTRR---KGHAHSLNTMLELVTTRFMLYLEDDWRW---EPSLPHHP-----LAHALAILEHDPTIVQ----VLVNTQ--------------------HSGWPRR--------------------LPTTDDSSFGL-------------------------------------------------------------YFRHEYGVVD--HAFGYWPGFSLNPGVWDLKRLSRC------PALRFNESSDVFEREFSLAVWRCGLHVAMLPYTTAVHIGTNGSAYVLNGLPRRFD 1195 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig12.236.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig12.236.1 >prot_P-littoralis_Contig12.236.1 ID=prot_P-littoralis_Contig12.236.1|Name=mRNA_P-littoralis_Contig12.236.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=410bp TSEELRGEKQRGSDGFNGGLGDDGDSGIPHFDWGNEGYEEDDDQGGGCVTback to top mRNA from alignment at P-littoralis_Contig12:1015086..1018374- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig12.236.1 ID=mRNA_P-littoralis_Contig12.236.1|Name=mRNA_P-littoralis_Contig12.236.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3289bp|location=Sequence derived from alignment at P-littoralis_Contig12:1015086..1018374- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig12:1015086..1018374- >mRNA_P-littoralis_Contig12.236.1 ID=mRNA_P-littoralis_Contig12.236.1|Name=mRNA_P-littoralis_Contig12.236.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1230bp|location=Sequence derived from alignment at P-littoralis_Contig12:1015086..1018374- (Pylaiella littoralis U1_48)back to top |