mRNA_P-littoralis_Contig12.225.5 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig12.225.5 vs. uniprot
Match: A0A6H5KYX0_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYX0_9PHAE) HSP 1 Score: 726 bits (1874), Expect = 7.150e-215 Identity = 811/1995 (40.65%), Postives = 970/1995 (48.62%), Query Frame = 2
Query: 1040 AKYHSNQKPGRDSLVEGLADPVSWLPGTPVEISGGGGGADEAGLPTKNPAAPTERVRRPRHSITRKTPPQDREDPAMPSPALRRRTSVRTSRQPSFGS-------------LRSVSEETADAGDLLDVVSREE----EGGHA----GESDEQSSQRAATIMDAIKVELGQDG---DGDATSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSFDVEAFLGSPLDSPAQPRPVLGDAAETPESSVAGGDGHGERRDLFDARLQEVVRSRNAID-TPEPAAAAAVVLQKKGDRRETTEASRYGELLLYLGGGLPSPIHPASDGQPQQXXXXXXXGTIPLESSVPGAGGESSPADAAATPTGSDSSSATALSMHGILGLASPPGASFDGPGNGKAEEDGGAPATGEAEGGGRMMTPRFDRPFAKDGGSGGKDSGRTAENVSVLGLLDSTPSPGGGLDQSVADGSALRGKTLARLYNDNGSSXXXXXXXXXXXXXXXXXXXXXXXXXXNNGRRNTCDPGDFEDIIGDLGSASGTPPSAAGRNNSSIGEDALSPPAN------VRLPGGSSS-----PAKSTAAYARLQKXXXXXXXXXPTAVPTAGEGLDEDSFVSPDRAAGEDPAVKKKDERRSTASPSALGALLLDLGVDIEDKTNQHSTADSTEAXXXXXXXXXSEDSGRVPFAHGAAEVPSP-IAHTPSPPVARRTRSKSPASTQKTNAAELGFVSPRAA----PKRRSMAISASPVAKAPVSKTAPDSARGPLKSCLSSRKRSRGVSVSGSVSGSYGNGGEASTTISGGYRSSPASSLGSPGVTGSG--DGQANGGPLSPAATRPGSAAVRGA-AXXXXAGLKTPGAXXXXXXXXXXXERRMPASDFGLETPRRVMFGAPMAAEFNHTSPSNRLTPMPSRDAKTLFPLEKQQEAETDEDEDTAANSAQLAEWEGVEPSEADELEFDDFDGVNGSGGMFSPEQRXXXXXXXXXXXXXXXXXXXXXXXXFKASPGRRNRRRESLAIKSPIRKSIAAYSEDVRTMQEG-PPSPYDSDVDERSRMIANLNASLSG-SVSAGSRPPAADTSEEPNNRSFSISTSELHPLNDSDSSMELTGNFSTTDELKAPAIFAGS--SDACQAAQSGWLRGGGXXXXXXXXXXXXXXXXXXXXXXXXXDVDISMDLNDSSELESNLRGISIRDAISPAPNNGSATRRSSLLSVVGDVEHFEEEVLSQASGKKASRKDEGSRGTSDEEVLSPPPRAAVDRGHDESAGEEPEPASVPQ-----GQRWTPSLAFRQGETSRLATVVEEMSLGSPLSSDQSQAQSRRWQSLGGASTESTMEAQEDMMEHVNELMR-TTAEPAQAPXXXXXXXASSGMPRIPSSXXXXXXXXXXXXXXXXVQRKSLESKXXXXXXXXXXXKGVGQRSLRFGGAPPPLQS---------PXXXXXXLSPTVELSGALEAFMGDSSPIAAATGPGVVGGXXXXXXXXXXXXXXXXXXXXXR---TPEGKRRRQSSI-----------------------GGASNSPTVELAADVMGYCEDLVAH-PADHYAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTIVVAFTPPRDAAVEAEAEGDTNLGRGGDDRVGEAAPSSSVSXXXXXXXXXXTPTSAAGAVTVVPAPAPVVARPPLDRPRRSSVSMAAAAQRNTAQREEANRRASLQVIMGANRHKSVGTVPAAIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGHSGGMEQGYGAMDESM-----------------DDVTVDDVTENVAPLGMSDDDFVKFVAREMATGEARAVPSTVVRPDGGVFSPERLRGMPDELVYAVAAAVQEAASYMEGGGPLRQENAVDNVKVAWEMHTHIPTLGEIDRAIAEGVEFSDAAG 6703
A++HSNQKPGRDSL +GL +P S PG + G GG E P NPAAPTER+RRP+ SI++ TPP + E+ A+P+P R S+R S QP+F S L S S ET D G+LL +S GG G+++ Q A +DA+ EL DG G XXXXXXXXXXXX + V++ LGS LDSP +AET S GG E + +D T + A K+ RR+T + S + +LL P+ PA+ G+ L ++ PG G A A TP GS S ATA+SM G+ P G AE +G P GGG ++TPRFDR + GG G KDSG TA N SV GLLDSTPSPGGG DQS +G RGK L + G+ NGRR TC+P +F D+I L S TP A+ R++S +GEDA SP + P S+S A AA Q XXX P + DEDSF SP + ++ K++++RRSTASP+ LGALL DLG ED+T++H T +STE +SG P GAAE SP IAHTPSPPVARRTRSKSPAS ++ N ELG VSPR A KR SM+ISASP +KA + AP+SARG LKSCLSSRKR+RG +G S S G SP++SLG+P T S DG SP+ +R G AA G A G+KTPG+ R PASD LETPRRVMFGAPMAAEFNH SPSNRLTPMPSRDAK+LFPLEK++EAETDEDEDTAANSAQLAEWEGVEP +LEFDDFDGVNG MFS EQ KASP SLAIKSP+RKSI AYSEDVR M G PPSPYDSD D +R + NLNASL G + SA R +A + EEP NRSFSI+ S+LH LNDSDSS+ELTG F+T ++++ + A + DA A G G DVD SM+LNDSSELES L G SIRDA SPAP+ + SLLSVV DVE FEEEVLSQASG+K + + ++ VL PPP D+ G+ W PSLAF QGE +RLATVVEEMS S LSSDQS AQSRRW+SLGGAS +ST E Q D+M+ ++ELM T PA A XXX ++ PR V R + S XXXXXX R GAP XXXXXX SPTVELSGALE +MGD V XXXXXXXXXXXXXXXXXXXXX G +RR SS G A SPTVEL+A++MGY DLVA PA A A XXXXXXXXXXXXXX A+A +A P++ + AV V AP PV+ RPP++ + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX E GA D SM DD+TENVAPL MS +D +KF A E E R ++V P G S +RLR MPDELVYA+A A+ +AA ME ++ +A++ ++AW+ H+ +P LGEIDR IAEG S A G
Sbjct: 278 ARHHSNQKPGRDSLAQGLVEPASLPPGALGRVGSGAGGVKEVAPPANNPAAPTERLRRPKDSISKATPPDNSENLAVPTPRPRHHDSLRLSHQPTFHSPNADSAASRNIDTLGSGSGETGDVGNLLADLSANSMISSAGGEVELDQGDAEGDHGQYTAMNVDAVMAELESDGLGGRGGVKGRDDRPXXXXXXXXXXXXAGSGGGVGTGRKKKRRNTAEKLTVDSLLGS-LDSPPVQSSGRARSAETCRDSAEGG-----------GATPEGAGEPSGVDPTSKQLAVLLPKAGKRSSRRDTVDPSDFQDLLRDTDMVTPT-SSPAAITAAAADAVALGDGSSALAATSPGEQG----AAAXXTP-GSGRSGATAVSMRGVFEPIDPAL-------GGSAEREG-LPV-----GGGGVITPRFDRRVSGFGGGGRKDSGGTAGNGSVCGLLDSTPSPGGGFDQSFGEGEG-RGK-LPPMTGRAGA--------IAAILDSGTRGGRSSAKAAKNGRRYTCEPEEFGDVIAGLDSEPDTP--ASSRDDSRVGEDAASPQEKEGSVETLSTPSSSASHDSCPEASGPAAQQSGQDAGANXXXGGPEE--SMDVDTDEDSFDSPGGGSEDENKPKEREDRRSTASPTTLGALLEDLGAQGEDETDEHGTVNSTEVVKASPPQ--ENESG--PSDDGAAENTSPVIAHTPSPPVARRTRSKSPASMKQVNVGELGLVSPRPALSAKNKRSSMSISASPASKASAPRPAPESARGRLKSCLSSRKRARG-GPAGVASSSSGR--------------SPSASLGTPDATNSAGTDGSLAMAGSSPSPSRGGGAAAGGGVAEGAPPGVKTPGSSWGVSCGGG----RGPASDMVLETPRRVMFGAPMAAEFNHLSPSNRLTPMPSRDAKSLFPLEKKEEAETDEDEDTAANSAQLAEWEGVEPMGTGDLEFDDFDGVNGGESMFSLEQEAFS----------------------KASP--------SLAIKSPVRKSIMAYSEDVRAMGGGGPPSPYDSDFDPAARRVENLNASLLGPAASAAKRGASAASYEEPQNRSFSINNSQLHRLNDSDSSLELTGTFTTGEDIRVTPVMAAAVPRDAAVAGADGGAAVG-TGGTGDLSRPTAGGAGDAERSGGDADVDDSMELNDSSELESTLHGASIRDAASPAPDPKRLSS-GSLLSVVDDVEEFEEEVLSQASGEKKTAPEGDDVPEKEQRVLLPPPATGADQXXXXXXXXXXXXXXXXXXHGSAGRSWVPSLAFGQGENARLATVVEEMSPNSLLSSDQSHAQSRRWESLGGASADSTFELQADIMDSMSELMGPATGRPAPASKGGPXXXXTAVEPRT---------------RRESVGRGTATSSTAAGAXXXXXXXXXXXR-FATAGAPQDAGGVRXXXXXXXXXXXXXXTSPTVELSGALEGYMGDEGGAQRRXXSSVSXXXXXXXXXXXXXXXXXXXXXXXXXXGADAGGQRRLSSASXXXXAGVAXXXXXXXXXXXXXXGAAPASPTVELSAELMGYVNDLVAGAPAGETAVAGVGKARPLSLSPFSPAPASTPAGNVNAEMDVRRAGASEXXXXXXXXXXXXXXXXXXXXXXXXXXXAVADAI--------------KAQPAAG---------------DGSTAVAVAAAPVPVLGRPPVNH-------------------------------LPPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFATGDGGVGTTTQSHDRRESAAGRLRRRLSSVESLHSGQEMTAVAEPEPQSSEEAEDGAEDASMRLXXXXXXXXXXXXXXXXXXXDDDLTENVAPLRMSMEDLIKFAAPEGVESERRWPARSMVVPLKGTLSRDRLRDMPDELVYAIAGALDDAAIEMEEWAEGKKTHAMNCGEMAWKYHSQVPILGEIDRVIAEGEGSSAANG 2096
BLAST of mRNA_P-littoralis_Contig12.225.5 vs. uniprot
Match: D7FTI1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTI1_ECTSI) HSP 1 Score: 681 bits (1758), Expect = 4.690e-207 Identity = 607/1387 (43.76%), Postives = 717/1387 (51.69%), Query Frame = 2
Query: 4001 AYSEDVRTMQEG-PPSPYDSDVDERSRMIANLNASLSG-SVSAGSRPPAADTSEEPNNRSFSISTSELHPLNDSDSSMELTGNFSTTDELK-APAIFAGSSDACQAAQSGWLRGGGXXXXXXXXXXXXXXXXXXXXXXXXXDVDI--SMDLNDSSELESNLRGISIRDAISPAPNNGSATRRSSLLSVVGDVEHFEEEVLSQASGKKASRKDEGSRGTSDEEVLSPPPRAAVDRGHDESAGEEPEPASVPQ-----GQRWTPSLAFRQGETSRLATVVEEMSLGSPLSSDQSQAQSRRWQSLGGASTESTMEAQEDMMEHVNELMRTTAEPAQAPXXXXXXXASSGMPRIPSSXXXXXXXXXXXXXXXXVQRKSLESKXXXXXXXXXXXKGVGQRSLRFG--------GAPPPLQS----------PXXXXXXLSPTVELSGALEAFMGDSSPIAAATGPGV------------------------------VGGXXXXXXXXXXXXXXXXXXXXXRTPEGKRRRQSSIGG-ASNSPTVELAADVMGYCEDLVAH-PADHYAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTIVVAFTPPRDAAV-EAEAEGDTNLGRGGDDRVGEAAPSSSVSXXXXXXXXXXTPTSAAGAVTVV---------PAPAPVVARPP----LDRPRRSSVSMAAAAQRNTAQREEANRRASLQVIMGANRHKSVGTVPAAIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGHSGGMEQGYGAMDESMDDVTVDDVTENVAPLGMSDDDFVKFVAREMATGEARAVPSTVVRPDGGVFSPERLRGMPDELVYAVAAAVQEAASYMEGGGPLRQENAVDNVKVAWEMHTHIPTLGEIDRAIAEGVEFSDAAGDPSFRVRGLSAKIKAGLERQWGAWEVGVLARMADEAAKVLSNVSQRREAFVKRGDELAEMLSRVELAENAIA----QEERRASVRSRLASGEAKAEEARSEIRVLEEGVTALELQQEEIAAKKAALLAGKARREERVKAVAERSASVVRLMELESDAIRSEREAVEMKETLDVQLGLRLWCQPVVVLPDEVVVAFVAPHDRVLKHQLKFSLNGSSVTSATSAAVRDSLRYPQKLGVFSPKGGMASVGGTNSASGRLSRLIFEGRSGLFSSGVGAAVAGLGGVKTVSDMRAEVQSAEWFVGRAYSLIQEICNLEKMYACTTTSAEHGSASTATGKGGAVLCVEVANWRSKQKLVSLRFRLSTPLVCCVGAPEVEVEIGDLDPSVVSEAVRKAKGDRAGILSVTKAVQAATSCM 7927
AYSEDVR M G PPSPYDSD D +R + NLNASL G + SA R +A + EEP NRSFSI+ S+LH LNDSDSS+ELTG F+T++E++ PA+ A S XXXXXX D D+ SMDLN+SSELES L G SIRDA SPAP+ + SLLSVV DVE FEEEVLSQASG+ + + G ++ VLSPPP G+ W PSLAF QGE +RLATVVEEMS S LSSDQS AQSRRW+SLGGAS +ST E Q D+M+ ++ELM P AS G P XXXXXXXV+ K G GAP XXXXXX SPTVELSGALE +MGD GG R RRRQSS+GG A SPTVEL+A++MGY DL A PA AA + A R A V E E + +G A XXXXXXXXXX P PV PP RASLQ +M R S T +G XXXXXXXXXXXXXXXXXXXXXXX N APL M +D +KF A E E R ++V P G S +RLR MPDELVYA+A A+ +AA ME ++ +AV+ ++AW+ H+ +P LGEIDR IAEG E S A GD + RVRGL+A+I AG+ERQ GAWEV VL R+ADEA KVLS VSQ REA VKRGDEL +++S +LAE AIA QEE+RASVRS++A + +E ++++ LEE + ALEL+Q+ +AAKKAALL GKARREER KA A+RSASVVRLMELE+ +I E+EA+EMKE LDVQLGLRLWCQP+ +LPD+V+VAF APHD LKHQLKF ++ +S S T VR P+K GV S KGGMA+VG NSASGRLSRLIFEG G+F G AVAGL VKTV+DMR EVQ+AEWFV RAYSL+QE+ +LEK YACT T E+ AS A AVLCVEVANWRSKQKLV LRF LST C VGAP VEV+IG L+ SVV EA+RKA GDRAG++S+TK V+AA +CM
Sbjct: 2 AYSEDVRAMGGGGPPSPYDSDFDPAARRVENLNASLLGPAASAVKRGASAASYEEPQNRSFSINNSQLHRLNDSDSSLELTGTFTTSEEVRITPAMAAAVSAPRDXXXXXXXXXXXXXXXXXGDLSRPAAGGAGEAEPSVGDADVDDSMDLNESSELESTLHGASIRDAASPAPDPKRLSS-GSLLSVVDDVEEFEEEVLSQASGETQTTPEGGEGPEKEQRVLSPPPAPXXXXXXXXXXXXXXXXXXXXXDHGSAGRSWVPSLAFGQGENARLATVVEEMSPNSLLSSDQSHAQSRRWESLGGASADSTFELQADIMDSMSELM--------GPATGRPAPASKGAPXX------------XXXXXXXVEPKKRRESVGGRTGTSSTAAGAXXXXXXXXXXXXFATVGAPQDAGGVRRQRXXXXXXXXXXXXTSPTVELSGALEGYMGDEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGADAGGQRRLSSAFAGAAAGVAHGGGQRM----RRRQSSVGGVAPASPTVELSAELMGYANDLAAGAPASESAAGGVGKARSPSLGPLSPAPASTPAGK------------------------------LSAEGKARRAGVPEEEXXXXXXXXENRNTAIGTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGRPPVTQLPPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRASLQEMMKQARCSSFATGDGGVGVKTQSDGQRESAAGRLRRRLSSVGSVHSGREMAAAAAAAAEPEVQSSEEAVDGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------------NFAPLRMGMEDLIKFAAPEGVDRERRWATRSMVVPLKGTLSRDRLRDMPDELVYAIAGALDDAAIEMEEWAEGKKTHAVNCGEMAWKYHSQVPILGEIDRVIAEGEESSAANGDLASRVRGLAAQINAGMERQIGAWEVTVLTRIADEATKVLSKVSQSREALVKRGDELEDLMSHADLAEKAIAEEIRQEEQRASVRSQIAKTAERTKEVQADVCGLEEELAALELRQQAVAAKKAALLEGKARREERAKAAAKRSASVVRLMELEAKSIGFEKEALEMKEKLDVQLGLRLWCQPITLLPDKVMVAFAAPHDWALKHQLKFVVDETSAASGTCTMVRGP--KPEKRGVLSKKGGMATVGDMNSASGRLSRLIFEGEGGIFGGAEGMAVAGLAWVKTVADMRTEVQNAEWFVSRAYSLLQEVHDLEKKYACTVTVVENDGASAAV----AVLCVEVANWRSKQKLVRLRFGLSTSFACLVGAPLVEVDIGSLEVSVVDEAIRKAGGDRAGLMSITKGVEAAAACM 1307
BLAST of mRNA_P-littoralis_Contig12.225.5 vs. uniprot
Match: D7FTI0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTI0_ECTSI) HSP 1 Score: 516 bits (1330), Expect = 6.730e-152 Identity = 528/1262 (41.84%), Postives = 629/1262 (49.84%), Query Frame = 2
Query: 314 MDVVDENQKFRSAAVGSPPARRKMASGIRAAGASPLAERPRDAQGLVVETPSHRAAG----SGYTSAGSNGSYKRSRRSRPGADGSRRKTASNLAVANVLDLLASPSTGEVSVDGLEEAATEGATVPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAG--------------------------------NGDGQAEEGVVGEAGDADAGRSDTAVDVSSILNPVKEGPSXXXXXXXXXXXXXXXXXXXXX------------RAKYHSNQKPGRDSLVEGLADPVSWLPGTPVEISGGGGGADEAGLPTKNPAAPTERVRRPRHSITRKTPPQDREDPAMPSPALRRRTSVRTSRQPSFGSLRSVSEETAD-------------AGDLLDVVSREE--EGGHAGESDEQSSQRAATIMDAIKVEL---GQDGDGDATSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSFDVEAFLGSPLDSPAQPRPVLGDAAETPESSVAGGDGHGERRDLFDARLQEVVRSRNAIDTPEPAAAAAVVLQKKGDRRETTEASRYGELLLYLGGGLPSPIHPASDGQPQQXXXXXXXGTIPLESSVPGAGGESSPADAAATPTGSDSSSATALSMHGILGLASPP-GASFDGPGNGKAEEDGGAPATGEAEGGGRMMTPRFDRPFAKDGGSGGKDSGRTAENVSVLGLLDSTPSPGGGLDQSVADGSALRGKTLARLYNDNGSSXXXXXXXXXXXXXXXXXXXXXXXXXXNNGRRNTCDPGDFEDIIGDLGSASGTPPSAAGRNNSSIGEDALSPPANVRLPGGSSSPAKSTAAYARLQKXXXXXXXXXPTAVPTAGEG---------LDEDSFVSPDRAAGEDPAVKKKDERRSTASPSALGALLLDLGVDIEDKTNQHSTADSTEAXXXXXXXXXSEDSGRVPFAHGAAEVPSPI-AHTPSPPVARRTRSKSPASTQKTNAAELGFVSPRAAP----KRRSMAISASPVAKAPVSKTAPDSARGPLKSCLSSRKRSRGVSVSGSVSGSYGNGGEASTTISGGYRSSPASSLGSPGVTGSG--DGQANGGPLSPAATRPGSAAV-RGAAXXXXAGLKTPGAXXXXXXXXXXXERRMPASDFGLETPRRVMFGAPMAAEFNHTSPSNRLTPMPSRDAKTLFPLEKQQEAETDEDEDTAANSAQLAEWEGVEPSEADELEFDDFDGVNGSGGMFSPEQ 3847
MDVVDENQ +GSP R+ A+ A+ ASPLAER RDAQG+V+E+ A G SG +S GSN + KR+RR+ GSRR+TASNL +A VL+ L SPSTGEV +EEAA G V A XXXXXXXXXXXXXXXXXX A G G A++ + G A +AD G D D S+I V +G + RA++HSNQKPGRDSL +GL +P S PG + G GG E NPAAPTERVRRP+HSI+R+TPP + E A+P+P R R S+R S QP+F S + S G LL +S G +E Q A +DA+ EL G G G+ XXXXXXXXXXXXX + V++ LGS LDSP A TP S GG + EP+ AA + + + LG G S L SS PG G A AAATP GS S ATA+SM G+ SP G S DG G GGG ++TPRFDR + G G KDSG TA N SV GLLDSTPSPGGGLDQS +G RGK L + G+ NGRRNTC+P +F D+I DL S TP A+ R++S +GEDA SP S+P+ S++ + + XXXXXXXXX G DEDSF SP + ++ K++D+RRSTASP+ LGALL DLG ED+T++H T +STE +SG P G E SPI HTPSPPVARRTRSKSPAS ++ N E+G SPR A KR SM+ISASP +K + AP+SARG LKSCLSSRKR+RG G A S G SP++SLG+P +T S DG SP+ +R G AA G G+KTPG XXXXX R PASD GLETPRRVMFGAPMAAEFNH SPSNRLTPMPSRDAK+LFPLEKQ+EAETDEDEDTAANSAQLAEWEGVEP +LEFDDFDGVNG+G MFSPEQ
Sbjct: 1 MDVVDENQGSHGI-IGSPVRRKVSAASHAASSASPLAERARDAQGVVMESQRQAAGGKKAVSGRSSTGSNSASKRARRTGKEPHGSRRETASNLELAGVLEALGSPSTGEVV---MEEAAVGGEAVAACAKKSRMRHKRRMTADILDINNIFDDSMSSDGXXXXXXXXXXXXXXXXXXRTGPAQAASPAGGSLTSSVYDGLDYVSSRSSGSRRSSLEGGGGADQMMAG-AEEADGG--DETADFSAIFKLVAQGTTPAGKNTRTPPGEGSQAVGAGVGSSSTPPPAGPPRARHHSNQKPGRDSLAQGLVEPASLPPGALGRVGSGAGGVKEVAPAANNPAAPTERVRRPKHSISRETPPDNWEHMAVPTPGPRHRDSLRPSHQPTFHSPNADSAAXXXXXXXXXXXXXXXXVGKLLADLSANSMISSAGGGSDEEDDGQYTAMNVDAVMAELESDGMGGRGEVRGCDDHPTAVDMDARVAELADGXXXXXXXXXXXXXNTAEKLTVDSLLGS-LDSPPVQSSGGTRLAGTPRDSAEGG-------------------GATPLGAAEPSGVAAT------SEQPAVLLPKAAADAVALGDGSSS-----------------------LASSSPGEQG----AAAAATP-GSGRSGATAVSMRGVFEPISPSLGGSADG--------------EGVPVGGGCVVTPRFDRRVSGSVGGGRKDSGGTAGNGSVCGLLDSTPSPGGGLDQSFGEGEG-RGK-LPPMTGRAGA--------IAAILDSGTRGRRSSAKAGKNGRRNTCEPEEFGDVIADLDSEPDTP--ASSRDHSRVGEDAASPQEKGEPVETLSTPSSSSSLDSSPEXXXXXXXXXXXXXXXXXXXGGPEESMDVDTDEDSFDSPGGGSEDENKPKERDDRRSTASPTTLGALLEDLGAQGEDETDEHGTVNSTEGVKASPPQ--ENESG--PSDDGVEENTSPIITHTPSPPVARRTRSKSPASMKRANVGEVGLASPRPAASARNKRSSMSISASPASKVSAPQPAPESARGRLKSCLSSRKRARG--------------GPAGVASSSGR--SPSASLGTPDLTNSAGTDGSLAMAGSSPSPSRGGGAAAGSGVIAGAPHGVKTPGPSSGVSGXXXXXXRG-PASDMGLETPRRVMFGAPMAAEFNHLSPSNRLTPMPSRDAKSLFPLEKQEEAETDEDEDTAANSAQLAEWEGVEPMGEGDLEFDDFDGVNGAGSMFSPEQ 1154
BLAST of mRNA_P-littoralis_Contig12.225.5 vs. uniprot
Match: A0A6H5KY64_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY64_9PHAE) HSP 1 Score: 318 bits (816), Expect = 4.470e-93 Identity = 184/272 (67.65%), Postives = 209/272 (76.84%), Query Frame = 2
Query: 7004 LEEGVTALELQQEEIAAKKAALLAGKARREERVKAVAERSASVVRLMELESDAIRSEREAVEMKETLDVQLGLRLWCQPVVVLPDEVVVAFVAPHDRVLKHQLKFSLNGSSVTSATSAAVRDSLRYPQKLGVFSPKGGMASVGGT---NSASGRLSRLIFEGRSGLFSSGVGAAVAGLGGVKTVSDMRAEVQSAEWFVGRAYSLIQEICNLEKMYACTTTSAEHGSASTATGKGGAVLCVEVANWRSKQKLVSLRFRLSTPLVCCVGAPEVE 7810
LEE + ALEL+Q+ +A+KKAALL GKARREER KA A+RSASVVRLMELE+ +I E+EA+EMKE LDVQLGLRLWCQP+ +LPD+V+VAF APHD LKHQLKF ++ SS TS T VR P+K GVFS KGGM +VG NSASGRLSRLIFEG G+F G AVAGL GVKTV+DMR EVQ+AEWFV RAYSL+QE+ +LEK YACT EH AS A K AVLCVEVANWRSKQKLV LRF LST C VGAP+VE
Sbjct: 124 LEEELAALELRQQAVASKKAALLEGKARREERAKAAAKRSASVVRLMELEAKSIGIEKEALEMKEKLDVQLGLRLWCQPITLLPDKVMVAFAAPHDWGLKHQLKFVVDESSATSGTCTMVRGP--KPEKRGVFSKKGGMTTVGDVGCENSASGRLSRLIFEGEGGIFGGAGGMAVAGLAGVKTVADMRTEVQNAEWFVSRAYSLLQEVHDLEKKYACTVAVVEHDGASAAVEKA-AVLCVEVANWRSKQKLVRLRFGLSTSFACLVGAPQVE 392 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig12.225.5 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig12.225.5 >prot_P-littoralis_Contig12.225.5 ID=prot_P-littoralis_Contig12.225.5|Name=mRNA_P-littoralis_Contig12.225.5|organism=Pylaiella littoralis U1_48|type=polypeptide|length=2539bp MDVVDENQKFRSAAVGSPPARRKMASGIRAAGASPLAERPRDAQGLVVETback to top mRNA from alignment at P-littoralis_Contig12:922272..955562- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig12.225.5 ID=mRNA_P-littoralis_Contig12.225.5|Name=mRNA_P-littoralis_Contig12.225.5|organism=Pylaiella littoralis U1_48|type=mRNA|length=33291bp|location=Sequence derived from alignment at P-littoralis_Contig12:922272..955562- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig12:922272..955562- >mRNA_P-littoralis_Contig12.225.5 ID=mRNA_P-littoralis_Contig12.225.5|Name=mRNA_P-littoralis_Contig12.225.5|organism=Pylaiella littoralis U1_48|type=CDS|length=7617bp|location=Sequence derived from alignment at P-littoralis_Contig12:922272..955562- (Pylaiella littoralis U1_48)back to top |