mRNA_P-littoralis_Contig12.21.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig12.21.1 vs. uniprot
Match: A0A6H5JDB4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDB4_9PHAE) HSP 1 Score: 288 bits (738), Expect = 1.940e-88 Identity = 146/280 (52.14%), Postives = 185/280 (66.07%), Query Frame = 1
Query: 190 RQAGAINSFVKLELEYGPHASIHSDMAALTANVSGRTLRSWVRHFVRGSRFKIQVREYSKRSLHSFIEDEDIRTMFREYLDERIYRRKKTDPQLRVQDVHRWINTVLLKDFITEESPRVSLRTTHAWMQAVGFRWRRHRKCVYVDGHNRPDVVEHRQTYVQTMLAVRTSTAMLVKQGEGPEAREVMLWPATREVAG-----EKEQCMHVELAGECDWEKFHNQTTSGVSGGMSDAEQVRLWATPPMRTPATPLPPGWELRAPKDVMEVIYHDECAWKEND 1014
RQA AI +FV LE+ G H HS++AAL V+G+ +R+WVR FV G RFK++VR+Y+ R+L S I DED R RE+LD +IY RK+ +PQLRV+D+ + +N LK ++ E + +S T H W+Q +GFRWRRHRKCVY DGHNRPD + R YV M + T L K GEGPEA EV LWPA E AG E MHV+L GEC WEK HN TSG + E++ LW T R PA PLPPG+ L P++VMEV+YHDECA+K+ND
Sbjct: 2 RQASAILTFVSLEIADGLHPIKHSEVAALPVGVTGKVVRAWVRDFVNGKRFKVRVRDYAARNLLSVINDEDFREESREWLDAKIYGRKEGEPQLRVRDLQKHLNDTALKPYMEEGARGISFDTVHRWLQDLGFRWRRHRKCVYADGHNRPDNIRRRMGYVTEMQEHQKRTVKLAKIGEGPEAEEVALWPAVFESAGGDPLGEGSTWMHVQLEGECGWEKQHNLRTSGKLEELPVDERLELWCTERQRVPAQPLPPGFRLLEPREVMEVVYHDECAYKQND 281
BLAST of mRNA_P-littoralis_Contig12.21.1 vs. uniprot
Match: A0A6H5L7W4_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7W4_9PHAE) HSP 1 Score: 257 bits (656), Expect = 7.520e-74 Identity = 149/333 (44.74%), Postives = 191/333 (57.36%), Query Frame = 1
Query: 40 AARVAREAHRKKVYLEASAALNEAVRYLKFEGIVEKP-EKLRDANGTAAAARQAGAINSFVKLELEYGPHASIHSDMAALTANVSGRTLRSWVRHFVRGSRFKIQVREYSKRSLHSFIEDEDIRTMFREYLDERIYRRKKTDPQLRVQDVHR--WINTVLLKDFITEESPRVSLRTTHAWMQAVGFRWRRHRKCVYVDGHNRPDVVEHRQTYVQTMLAVRTSTAMLVKQGEGPEAREVMLWPATREVAG-----EKEQCMHVELAGECDWEKFHNQTTSGVSGGMSDAEQVRLWATPPMRTPATPLPPGWELRAPKDVMEVIYHDECAWKEND 1014
AAR+ + R +++ +A L AVR+ + E IVE P E L N A RQA AI +FV LE+ G H HS++AAL V+G+ +R+WVR FV G RFK++VR+Y+ R+L S R Y + + V R +N LK ++ E + +SL T H W+Q +GFRWRRHR CVY DGHNRPD + R YV M + T L K GEGPEA EV LWPA E AG E MHV+L GEC WEK HN TSG + E++ LW T R PA PLPPG+ L P++VMEV+YHDECA+K+ND
Sbjct: 307 AARLKVQQERLEIFEQAKGILFPAVRHFRLENIVENPDEALATDNKKGYAMRQASAILTFVSLEIADGLHPIKHSEVAALPVGVTGKVVRAWVRDFVNGKRFKVRVRDYAARNLLSLFSTTRTFAKSRASGWTPRYTAARRGSRSYVFGTSRSEHLNDTALKPYMEEGARGISLDTVHRWLQDLGFRWRRHRNCVYADGHNRPDNIRRRTGYVTEMQEHQKRTVKLAKIGEGPEAEEVALWPAVSESAGGDPLGEGSTWMHVQLEGECGWEKQHNLRTSGKLEELPVDERLELWCTERQRVPAQPLPPGFRLLEPREVMEVVYHDECAYKQND 639
BLAST of mRNA_P-littoralis_Contig12.21.1 vs. uniprot
Match: A0A6H5J8S2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8S2_9PHAE) HSP 1 Score: 169 bits (429), Expect = 3.290e-48 Identity = 87/174 (50.00%), Postives = 114/174 (65.52%), Query Frame = 1
Query: 190 RQAGAINSFVKLELEYGPHASIHSDMAALTANVSGRTLRSWVRHFVRGSRFKIQVREYSKRSLHSFIEDEDIRTMFREYLDERIYRRKKTDPQLRVQDVHRWINTVLLKDFITEESPRVSLRTTHAWMQAVGFRWRRHRKCVYVDGHNRPDVVEHRQTYVQTMLAVRTSTAMLV 711
RQA AI +FV LE+ G H HS++AAL V+G+ +R+WVR FV G RFK++VR+Y+ R+L S I DED R RE+LD +IY RK+ +PQLRV+D + +N LK ++ E + L T H W+Q +GFRWRRHRKCVY DGHNRPD + R YV M + T V
Sbjct: 2 RQASAILTFVSLEIADGLHPIKHSEVAALPVGVTGKVVRAWVRDFVNGKRFKVRVRDYAARNLLSVINDEDFREESREWLDAKIYGRKEGEPQLRVRDFQKHLNDTALKPYMEEGARGNCLDTVHRWLQDLGFRWRRHRKCVYADGHNRPDNIRRRMGYVTEMQEHQKRTVKCV 175
BLAST of mRNA_P-littoralis_Contig12.21.1 vs. uniprot
Match: A0A6H5K1P6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1P6_9PHAE) HSP 1 Score: 154 bits (390), Expect = 3.190e-42 Identity = 90/202 (44.55%), Postives = 116/202 (57.43%), Query Frame = 1
Query: 109 AVRYLKFEGIVEKP-EKLRDANGTAAAARQAGAINSFVKLELEYGPHASIHSDMAALTANVSGRTLRSWVRHFVRGSRFKIQVREYSKRSLHSFIEDEDIRTMFREYLDERIYRRKKTDPQLRVQDVHRWINTVLLKDFITEESPRVSLRTTHAWMQAVGFRWRRHRKCVYVDGHNRPDVVEHRQTYVQTMLAVRTSTAMLV 711
AVR+ + E IVE P E L N A RQA AI +FV LE+ G H HS++AAL V+G+ +R+WVR FV G RFK++VR+ + R+L S I DED R RE+LD +IY RK+ +PQLRV+D+ +W+ Q +GFRWRRHRKCV DGHNRPD + R YV M + T V
Sbjct: 12 AVRHFRLENIVENPDEALATDNKKGYAMRQASAILTFVSLEIADGLHPIKHSEVAALPVGVTGKVVRAWVRDFVNGKRFKVRVRDLAARNLLSVINDEDFREESREWLDAKIYGRKEGEPQLRVRDLQKWL-------------------------QDLGFRWRRHRKCVNADGHNRPDNIRRRMGYVTEMQEHQKRTVKCV 188
BLAST of mRNA_P-littoralis_Contig12.21.1 vs. uniprot
Match: A0A6H5KM05_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM05_9PHAE) HSP 1 Score: 157 bits (398), Expect = 5.910e-41 Identity = 79/163 (48.47%), Postives = 104/163 (63.80%), Query Frame = 1
Query: 202 AINSFVKLELEYGPHASIHSDMAALTANVSGRTLRSWVRHFVRGSRFKIQVREYSKRSLHSFIEDEDIRTMFREYLDERIYRRKKTDPQLRVQDVHRWINTVLLKDFITEESPRVSLRTTHAWMQAVGFRWRRHRKCVYVDGHNRPDVVEHRQTYVQTMLAVR 690
A + K+ ++ G HS AA A V + +R WV+ F +G F + R+Y+KR HSFIEDED R R Y+D ++YRRKK +P+LR+ DV +WIN LLKD + + VS RT H WMQ +GFRW RH KCVYVDGHNRPD+V R+ +V +L R
Sbjct: 271 AYDKLQKVRIQEGVAKMDHSRAAAEVAKVESKAVRRWVKEFCKGGAFVVPKRQYNKREPHSFIEDEDKRNHLRGYIDRKLYRRKKDEPRLRIADVQKWINEELLKDELAG-TKGVSRRTVHKWMQKLGFRWSRHHKCVYVDGHNRPDIVNDRRGFVAYLLGPR 432
BLAST of mRNA_P-littoralis_Contig12.21.1 vs. uniprot
Match: A0A6H5K527_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K527_9PHAE) HSP 1 Score: 162 bits (411), Expect = 7.440e-41 Identity = 99/282 (35.11%), Postives = 137/282 (48.58%), Query Frame = 1
Query: 127 FEGIVEKPEKLRDANGTAAAARQAGAINSFVKLELEYGPHASIHSDMAALTANVSGRTLRSWVRHFVRGSRFKIQVREYSKRSLHSFIEDEDIRTMFREYLDERIYRRKKTDPQLRVQDVHRWINTVLLKDFITEESPRVSLRTTHAWMQAVGFRWRRHRKCVYVDGHNRPDVVEHRQTYVQTMLAVR--------TSTAMLVKQGEGPEAR-------------------EVMLWPATREVAGEKEQCMHVELAGECDWEKF-HNQTTSGVSGGMSDAEQV 888
+ +VEKP+ + R GA+ +++ +E+ G HS V RT+R WV F + +F + REY KR +I+DEDIR REY+DERIYRRKK P+ RV D RW+NTV LK+ + T H W+ +GFRWRRH KCVYVDGHNRPDVV+ R+ Y + M +R T ++VK + + E +LWPA R + HV + G+ E H++ + VS D E
Sbjct: 436 YTSLVEKPDTMLARVRAVRVCRVIGAVRTYLTMEINEGVKKLAHSRAVGEAVGVHARTVRKWVTDFCKDGKFVVPHREYVKRQPFCYIDDEDIREQCREYVDERIYRRKKGQPRFRVADFQRWVNTVCLKEEFAGGGG-ICRSTAHVWIAQLGFRWRRHGKCVYVDGHNRPDVVQARRLYTEKMFVMRRLMSIPEKVETVVMVKVRDARDREKTSTDDRRDDNITAAVACAEPVLWPAVRTMPDGGVDFKHVLVYGDKFTEATGHDRCCTRVSVDAGDLEMT 716
BLAST of mRNA_P-littoralis_Contig12.21.1 vs. uniprot
Match: A0A6H5K550_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K550_9PHAE) HSP 1 Score: 162 bits (409), Expect = 1.250e-40 Identity = 82/199 (41.21%), Postives = 120/199 (60.30%), Query Frame = 1
Query: 127 FEGIVEKPEKLRDANGTAAAARQAGAINSFVKLELEYGPHASIHSDMAALTANVSGRTLRSWVRHFVRGSRFKIQVREYSKRSLHSFIEDEDIRTMFREYLDERIYRRKKTDPQLRVQDVHRWINTVLLKDFITEESPRVSLRTTHAWMQAVGFRWRRHRKCVYVDGHNRPDVVEHRQTYVQTMLAVRTSTAMLVKQGE 723
+ +VE + + R A A+ F++LE+ G HS + V T+R WV+ F G F ++ R+Y+KR HS+I+DED+R REY+D R+YRRKK +P+LR+ DV +WI+ LLK+ + + VS RT H WMQ +GFRW RH KCVYVDGHNRPDVV R+++V + +R ++ ++ E
Sbjct: 4 YGSVVEDSKTQLNEAHVVHTTRVARAVKHFLQLEIRDGVTKMAHSREVGEVSEVDPTTVRRWVKEFCNGGSFVVRKRQYNKREAHSYIDDEDVRYRLREYIDRRLYRRKKNEPRLRIADVQKWIHEDLLKEELAG-TRGVSWRTVHKWMQKLGFRWSRHHKCVYVDGHNRPDVVTDRRSFVALLKRLRQKMSIPLRVEE 201
BLAST of mRNA_P-littoralis_Contig12.21.1 vs. uniprot
Match: A0A6H5JJM4_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJM4_9PHAE) HSP 1 Score: 160 bits (406), Expect = 3.020e-40 Identity = 82/170 (48.24%), Postives = 112/170 (65.88%), Query Frame = 1
Query: 256 HSDMAALTANVSGRTLRSWVRHFVRGSRFKIQVREYSKRSLHSFIEDEDIRTMFREYLDERIYRRKKTDPQLRVQDVHRWINTVLLKDFITEESPRVSLRTTHAWMQAVGFRWRRHRKCVYVDGHNRPDVVEHRQTYVQTM--------LAVRTSTAMLVKQGEGPEARE 741
HS A A+V RT+R WV+ F +G F ++ R+Y+KR HS+I+DEDIR REY+D R+YRRKK +P+LR+ DV +WIN LLK+ + + +S RT H WMQ +GFRW RH KCVYVDGHNRPDVV R+++V+ + + VR ++V G EAR+
Sbjct: 3 HSREAGKVADVDSRTVRRWVKEFCKGDSFVVRKRQYNKREPHSYIDDEDIRGRLREYIDRRLYRRKKDEPRLRIADVQKWINEDLLKEELAG-TRGISRRTVHKWMQKLGFRWSRHHKCVYVDGHNRPDVVTDRRSFVELLKRLHQNMSIPVRVEETVMVATSRG-EARQ 170
BLAST of mRNA_P-littoralis_Contig12.21.1 vs. uniprot
Match: A0A6H5JJ42_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ42_9PHAE) HSP 1 Score: 160 bits (406), Expect = 3.670e-40 Identity = 94/252 (37.30%), Postives = 132/252 (52.38%), Query Frame = 1
Query: 136 IVEKPEKLRDANGTAAAARQAGAINSFVKLELEYGPHASIHSDMAALTANVSGRTLRSWVRHFVRGSRFKIQVREYSKRSLHSFIEDEDIRTMFREYLDERIYRRKKTDPQLRVQDVHRWINTVLLKDFITEESPRVSLRTTHAWMQAVGFRWRRHRKCVYVDGHNRPDVVEHRQTYVQTMLAVR--------TSTAMLVK---QGEGPEA---------------REVMLWPATREVAGEKEQCMHVELAG 813
+VE E++ A R + ++ LE+ YG +HS A V +T+R WV F + +F + R Y KR ++I+DEDIR REY+DERIYRRK T + RV D HRW+N V L++ ++ +S T H W+ +GFRWRRH KCVYVDGHNRPDVVE R+ Y + M +R T ++VK EG E+ +E +LWP R++ + HV + G
Sbjct: 401 LVENEERMLTPERIACVCRVISVVRAYFDLEIRYGVQKMVHSRAVGEGAGVHAKTVRRWVTEFCKDGKFVVPDRAYVKRQPFTYIDDEDIRDQCREYIDERIYRRKGT--RFRVADFHRWVNEVCLEEEF-KDGGGISRSTAHHWISQLGFRWRRHGKCVYVDGHNRPDVVEARRLYTEKMFVMRRIISIPEKVETVVMVKVRDAEEGEESAMGDSDGSITGLAAGKEPVLWPVVRKMPDGRVDSKHVLVYG 649
BLAST of mRNA_P-littoralis_Contig12.21.1 vs. uniprot
Match: D7FZS4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZS4_ECTSI) HSP 1 Score: 144 bits (364), Expect = 5.210e-38 Identity = 77/174 (44.25%), Postives = 104/174 (59.77%), Query Frame = 1
Query: 136 IVEKPEKLRDANGTAAAARQAGAINSFVKLELEYGPHASIHSDMAALTANVSGRTLRSWVRHFVRGSRFKIQVREYSKRSLHSFIEDEDIRTMFREYLDERIYRRKKTDPQLRVQDVHRWINTVLLKDFITEESPRVSLRTTHAWMQAVGFRWRRHRKCVYVDGHNRPDVVEHR 657
+VE P+ + D R A+ F++LE++ G HS A V T+R WV+ +G I+ R+Y+KR H +I+DEDIR REY+D R+YRRK+ +P+LR+ DV +WIN LLK+ + + S RT H WMQ + FRW RHRK V VDGHNRPDVV R
Sbjct: 47 VVEDPKIMLDERHMVQTTRVVRAVKHFLQLEVQDGVAKMEHSREVAKVYEVDPSTVRRWVKKLCKGGSVVIRKRQYNKREAHPYIDDEDIRNGLREYIDRRLYRRKRDEPRLRIADVQKWINDDLLKEELAG-TRGFSRRTVHKWMQKLDFRWSRHRKWVDVDGHNRPDVVTPR 219 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig12.21.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig12.21.1 >prot_P-littoralis_Contig12.21.1 ID=prot_P-littoralis_Contig12.21.1|Name=mRNA_P-littoralis_Contig12.21.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=338bp MARKEAKRKENKRAARVAREAHRKKVYLEASAALNEAVRYLKFEGIVEKPback to top mRNA from alignment at P-littoralis_Contig12:74317..76109+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig12.21.1 ID=mRNA_P-littoralis_Contig12.21.1|Name=mRNA_P-littoralis_Contig12.21.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1793bp|location=Sequence derived from alignment at P-littoralis_Contig12:74317..76109+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig12:74317..76109+ >mRNA_P-littoralis_Contig12.21.1 ID=mRNA_P-littoralis_Contig12.21.1|Name=mRNA_P-littoralis_Contig12.21.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1014bp|location=Sequence derived from alignment at P-littoralis_Contig12:74317..76109+ (Pylaiella littoralis U1_48)back to top |