mRNA_P-littoralis_Contig12.144.21 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig12.144.21
Unique NamemRNA_P-littoralis_Contig12.144.21
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig12.144.21 vs. uniprot
Match: A0A6H5KH67_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH67_9PHAE)

HSP 1 Score: 843 bits (2178), Expect = 1.210e-287
Identity = 485/959 (50.57%), Postives = 604/959 (62.98%), Query Frame = 1 
Query:  679 IFELFDEAGGGILHVHDLAAGLAVLCDGSVARSVRCACQLYRGAGGDMGFVEISSFTLSILKVVYAASPANWAWPGMLPRELSAVMSSEFLIQKGLPLSGRVGFEEWFASTIPEEDERSCDDSYGDAWAHLLQGLQNHDMQVILELLAAFVDQHGGISSPAFFGCIRALFEVDGRGPLTDAETAKLKVALTRLFIMLDDHRLGTVPFGDLASGISAFCDKHDNETARALFDIHGNEDGSIAEEDMRKLLVPFFKVMFEVDPHARNLTGTGTRRKSVDPESLAETIAACAFEDATLGPDGAMSFEGFYRWYSSSFEVPSSSVPVGDSPRSLASSDDALRTALDVGEVHRIFKLRDINAAGFIYGLSAASCQGRVSWISFLRYMHGFANARPLTEESRSAVMMARKLFDVYDEDKQREVDLRVLASGLAILCKGSWKDRATALFSVLDTERQGSLSREDMRVYFSSTSKLLCSVQPSVLTSTNSSALTEAFGTSPEEGVNETERFDERMFASLYSDMNNREGCRVTKGT--------SETLEQARQDTQLYTTPAAHTFGVLKDALNDQGRLTRPAMHRCLRQLRAMVHNQARHRENEKVKGAKGAVSEHTYSSAAAENVMNRLFDAVDVGNVGDVNFCEFASALSVLCGGSREEKMMAIFNLFHRSEGVGITVRDIATFTTSAFRVMYKLQPSLEGEVGITPEVLGNVTASNMMEEVEPNGDGRISPTNFGWWLSDEGNPNGVRRTTAAGFACHSSRVDSVGEGSTQPDEDVTQHDGNARAGFRGDQLEGQGHIVMRARKLLCLDCFSVNDLLEILAEVAIMKQGALAQDDFWRCIGYVLQLGGTAEGTTEWDEAFLLTECIYHAFEGNDGVVAFAAIACGVSILCQSTAEDKVLVAFLLLDTDGDGQLVFEEVSMYIASVLKVVYAIGQGVTAIINPDELGAALATQCFKQAKLAIDDK 3531
            +F+LFD+  GGILH+ DLAAGL VLCD S+A+ V+CAC+LYRG  GD GF ++   TLSILKV++A+  A+W WPGMLP+E+SAV+SSEF ++KGLPLSGRV  + W A  I EE ERS + + G  W HLLQGL+ +D+ V+L LL+AFVDQ GGIS PAF GC+RALFE DGR  L+ AET +LK++LTRL+ +LD  R+GTV   DLASGIS FC   +N + RA+F+++G  +GSIA + MRK L   FKV+F VDP AR L G   R + VDP  LAET  A AFEDA L PDG +  E F+ WYS     P                   + +A+ V E      LR +  A  ++   A +C  RVS I FLRY  G A++RPL EESR+A    R+  DV DE  +R V                                 G L  +           L     PS  T+ NS    EA  T P+E     E+  E       S  N     R  KG         SE+LEQAR+ T+L  T  A    VL+D +N+ GRL R ++H+C+R+LR  + N++R RE   V   +    + +YSS+AA +V+NRLFDAVDV N GDVNFCEFASALS+LCG +R+EKM AIFNLF   E  GIT RDIAT+TTSAFR MYKLQPSLE EVGI PE LG +TASNMMEE   NGDGRISP  F  WLSD+G+P+G               +   GE   +PDEDV            G+ L G+ H+VMRARKLLCLDCF+V +L+EI+AEV +   G +A DD WRCIGY+LQLGGT EGT EWD+AF LT+ I+ AF+ NDG+V FAA+ CG+S LCQ + EDK+LVAF L DTDGDGQL FEE+S  IASVL+VV A+GQ V  I NPD LGAALATQCF+QA ++ID+K
Sbjct:    1 MFDLFDDGRGGILHIQDLAAGLTVLCDASMAQFVQCACRLYRGPDGDSGFDDVFGLTLSILKVLHASGTADWPWPGMLPQEVSAVVSSEFFLRKGLPLSGRVTID-WSAVAILEETERSSETADGGCWGHLLQGLRKYDVTVVLGLLSAFVDQSGGISRPAFVGCMRALFEEDGRCVLSAAETMELKISLTRLYQVLDGDRMGTVAPRDLASGISLFCGNINNASVRAMFEVYGTVEGSIARDCMRKFLQAVFKVLFHVDPGARVLAGNDPRGERVDPAYLAETATAHAFEDAVLNPDGTLGSEKFHHWYSRFVGAP-------------------VTSAMGVRE------LRSMKGAKSLHN-GAVACCVRVSLIPFLRYCCGLASSRPLMEESRTAAATERRDLDVNDEGIERNV---------------------------------GGLHAQ-----------LHSKAHPSTSTAANSD---EASWTEPDELRGGLEKLAEGSANGSSSKENTGGEGRPCKGILDEVESPLSESLEQARRVTRLCNTSVAQVVAVLQDFVNEGGRLARQSVHQCIRRLRTAIENESRVRET--VGEYEENARDQSYSSSAARHVINRLFDAVDVHNAGDVNFCEFASALSILCGDTRQEKMRAIFNLFLGGEECGITARDIATYTTSAFRAMYKLQPSLEEEVGIAPEALGILTASNMMEEALRNGDGRISPRAFSGWLSDDGDPHGAEGFARDAEPLEPPGIGKAGEDDARPDEDVALRGDREVGHADGEGLSGKQHVVMRARKLLCLDCFNVTELMEIVAEVTVT--GTVALDDMWRCIGYLLQLGGTNEGTVEWDDAFFLTQRIHRAFQDNDGIVGFAALTCGISTLCQLSVEDKILVAFTLFDTDGDGQLTFEELSTCIASVLRVVCAVGQDVKGIANPDRLGAALATQCFRQATVSIDEK 881
[Close]
BLAST of mRNA_P-littoralis_Contig12.144.21 vs. uniprot
Match: D7FKQ2_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKQ2_ECTSI)

HSP 1 Score: 731 bits (1886), Expect = 8.430e-245
Identity = 449/984 (45.63%), Postives = 554/984 (56.30%), Query Frame = 1 
Query:  604 RAEFDVFLKDLASLLESPTLSTSIQIFELFDEAGGGILHVHDLAAGLAVLCDGSVARSVRCACQLYRGAGGDMGFVEISSFTLSILKVVYAASPANWAWPGMLPRELSAVMSSEFLIQKGLPLSGRVGFEEWFASTIPEEDERSCDDSYGDAWAHLLQGLQNHDMQVILELLAAFVDQHGGISSPAFFGCIRALFEVDGRGPLTDAETAKLKVALTRLFIMLDDHRLGTVPFGDLASGISAFCDKHDNETARALFDIHGNEDGSIAEEDMRKLLVPFFKVMFEVDPHARNLTGTGTRRKSVDPESLAETIAACAFEDATLGPDGAMSFEGFYRWYSSSFEVPSSSVPVGDSPRSLASSDDALRTALDVGEVHRIFKLRDINAAGFIYGLSAASCQGRVSWISFLRYMHGFANARPLTEESRSAVMMARKLFDVYDEDKQREVDLRVLASGLAILCKGSWKDRATALFSVLDTERQGSLSREDMRVYFSSTSKLLCSVQPSVLTSTNSSALTEAFGTSPEEGVNETERFDERMFASLYSDMNNREGCRVTKGT--------SETLEQARQDTQLYTTPAAHTFGVLKDALNDQGRLTRPAMHRCLRQLRAMVHNQARHRENEKVKGAKGAVSEHTYSSAAAENVMNRLFDAVDVGNVGDVNFCEFASALSVLCGGSREEKMMAIFNLFHRSEGVGITVRDIATFTTSAFRVMYKLQPSLEGEVGITPEVLGNVTASNMMEEVEPNGDGRISPTNFGWWLSDEGNPNGVRRTTAAGFACHSSRVDSVGEGSTQPDEDVTQHDGNARAGFRGDQLEGQGHIVMRARKLLCLDCFSVNDLLEILAEVAIMKQGALAQDDFWRCIGYVLQLGGTAEGTTEWDEAFLLTECIYHAFEGNDGVVAFAAIACGVSILCQSTAEDKVLVAFLLLDTDGDGQLVFEEVSMYIASVLKVVYAIGQGVTAIINPDELGAALATQCFKQAKLAIDDK 3531
            RAEFD  LK LA  L    LST+  IF LFD+  GGILH+ DLAAGL VLCD S+A+ V+CAC+LYRG  GD GF ++   TLSILKV++A+  A+W WPGMLP E+SAV+SS+F ++KGLPLSGRV  + W A    EE ERS + + G  W HLLQGL+ +D+ V+L LL+AFVDQ GGIS PAF GC+RALFE DG   L+ AET +LK++LTRL+ +LD  R+ TV F DLA  + A                                                                                                         PV    R                      ++R +N A  ++ L A +C  RVS   FLR+  G A++RPL EESR+A    R+  DV DE  +R VDL                                               +L     PS  T+ NS+   EA  T P+E   E E+  ER      S  +     R  KGT        SE+LEQAR+ T+L  T  A    VLKD +ND GRL R ++H+C+R+LR  + N++R RE   V   +    + +YSSAAA +V+NRLFDAVDV N GDVNFCEFASALSVLCG +R+EKM AIFNLF   E  GIT RDIAT+TTSAFR MYKLQPSLEGEVGI PE LG +TASNMMEE   NGDGRISP +F  WLSD+GNP+G               ++  GE   +PDEDV            G  L  + HIVMRARKLLCLDCF+V +L+EILAEV +   G LA  D WRCIGY+LQLGGT+EGT EWD+AF LT+ I+ AF+ NDG+V FAA+ CG+S LCQ + +DK+LVAF L DTDGDGQL FEE++  IASVL+VV A+GQ V  I NPD LGAALATQCF+QA ++ID+K
Sbjct:   15 RAEFDADLKHLAKNLGIEALSTTRAIFGLFDDGRGGILHIQDLAAGLTVLCDASMAQFVQCACRLYRGPDGDSGFDDVFGLTLSILKVLHASGRADWPWPGMLPHEVSAVVSSDFFLRKGLPLSGRVTID-WSAFAALEETERSSETAGGGCWGHLLQGLRKYDITVVLGLLSAFVDQSGGISRPAFVGCMRALFEEDGCCVLSAAETMELKISLTRLYQVLDGDRMETVAFRDLARFVRA---------------------------------------------------------------------------------------------------------PVTSGVR----------------------EIRSMNWAESLHNLGAVACCVRVSLTPFLRFCCGLASSRPLMEESRTAAATERRDLDVNDERIERNVDLHA---------------------------------------------RLHSKAHPSTSTAANSN---EASWTEPDELRGELEKLAERSANGSSSKEDTGGEGRPCKGTLDEVESPLSESLEQARRVTRLCNTSVAQVVVVLKDFVNDGGRLARQSVHQCIRRLRTAIENESRVRET--VGEYEENARDQSYSSAAAHHVINRLFDAVDVHNAGDVNFCEFASALSVLCGDTRQEKMRAIFNLFLGGEECGITARDIATYTTSAFRAMYKLQPSLEGEVGIAPEALGILTASNMMEEALRNGDGRISPRDFSGWLSDDGNPHGAEGFARDAEPLEPPGIEKAGEDDARPDEDVALRGDREVGHADGAGLSRKQHIVMRARKLLCLDCFNVMELMEILAEVTVT--GTLALGDMWRCIGYLLQLGGTSEGTVEWDDAFFLTQRIHRAFQDNDGIVGFAALTCGISTLCQLSVKDKILVAFTLFDTDGDGQLTFEELTTCIASVLRVVCAVGQDVKGIANPDRLGAALATQCFRQATVSIDEK 818
[Close]
BLAST of mRNA_P-littoralis_Contig12.144.21 vs. uniprot
Match: A0A2D4BN96_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BN96_PYTIN)

HSP 1 Score: 338 bits (866), Expect = 2.460e-94
Identity = 309/1093 (28.27%), Postives = 482/1093 (44.10%), Query Frame = 1 
Query:  505 LAELRRKLGICTFPAEDVLNALRSTAASDGKLTRAEFDVFLKDLASLLESPTLSTSIQ----------------IFELFDEAGGGILHVHDLAAGLAVLCDGSVARSVRCACQLYRGAG-GDMGFVEISSFTLSILKVVYAASPANWAWPGMLPRELSAVMSSEFLIQKGLPLSGRVGFEE---WFAST-----IPEEDER--SCDDSYGDAWAHLLQGLQNHDMQVILELLAAFVDQHGGISSPAFFGCIRALFEVDGRGPLTDAETAKLKVALTRLFIMLDDHRLGTVPFGDLASGISAFCDKHDNETARALFDIHG-NEDGSIAEEDMRKLLVPFFKVMFEVDPHARNLTGTGTRRKSVDPESLAETIAACAFEDATLGPDGAMSFEGFYRWYSSSFEVPSSSVPVGDSPRSLASSDDALRTALDVGEVHRIFKLRDINAAGFIYGLSAASCQGRVSWISFLRYMHGFANARPLTEESRS---AVMMARKLFDVYDEDKQREVDLRVLASGLAILCKGSWKDRATALFSVLDTERQGSLSREDMRVYFSSTSKLLCSVQPSVLTSTNSSALTEA-FGTSPEEGVNETERFDERMFASLYSDMNNR---EGCRVTKGTSET------------LEQARQDTQLYTTPAAHTFGVLKDALNDQGRLTRPAMHRCLRQLRAMVHNQARHRENEKVKGAKGAVSEHTYSSAAAENVMNRLFDAVDVGNVGDVNFCEFASALSVLCGGSREEKMMAIFNLFHRSEGVGITVRDIATFTTSAFRVMYKLQPSLEGEVGITPEVLGNVTASNMMEEVEPNGDGRISPTNFGWWLSDEGNPNGVRRTTAA-GFACHSSRVDSVGE--GSTQPDEDVTQHDGNARAGFRGDQ-------------------------LEGQGHIVMRARKLLCLDCFSVNDLLEILAEVAIMKQGALAQDDFWRCIGYVLQLGGTAEGTTEWDEAFLLTECIYHAFEGN-DGVVAFAAIACGVSILCQSTAEDKVLVAFLLLDTDGDGQLVFEEVSMYIASVLKVVYAIGQGVTAI--INPDELGAALATQCFKQAKLAIDDKKFLLEY 3549
            L E++    +  F  E+V     S A  DG ++R  F+   + + + L+S      +                 +F+LFD    G +   +LA+GL+VLC G+  + VR A  L+   G G +   E++ +  S+ +V++  +P +    G+ P EL  V + +   +      GR+ FEE   W+        + ++ E+  S D+      A  L  L +     + E LA   D+ G +S  AF  C R+ F    RG +   E  ++   L RLF + D  + G V F +++SG+S FC    +E  RA F ++  N DG I+ ++M + L   FKV+ E  P       +   R    PE L    A  AF +A L  DG +SF  F  WY +S       +   + P  L+  +    T L   + + + +      A F      AS  G ++  +F R    FA  R  + + ++     ++  ++F ++D D    VD   LASGL+ILC G+  D+  A F++ D    G +S  +MR+Y +S  K+L  V P           T+A  G SPEE    T    E+ FA   SD + R   E  RV     +T            L+  ++ T L        F V  +  ++ G ++R A   C  QL       AR R +E          EH         +++RLF   D    G V+FCE +S LSVLCGGSRE+K+ + F L+  ++   I++ ++  + TS F+V+Y+  PS    +G+ PE L  +TA     E + N DG++S   F  W S   +        A+ G   H  R +   +  GS Q         G   A F  +                          L      + RAR+LL LD + VND+ EI AE A    G L   +F +C   +++L G  E T E  EA  +   ++  F+ +    V F  +A G+S+L  S  +DKV  AF L D +GDG +  EE+  Y+ S+ KV+Y   +       ++P+EL    A QCFK+A L  D+K    E+
Sbjct:   17 LNEIKELTNLAQFEPEEVFEVFASEADKDGLISREAFNTSFRRIVAGLDSAAPRPGVDGMPLDKQERFQEVINGLFDLFDSDKSGSVDFGELASGLSVLCGGTKDQKVRAAFSLFDFNGDGYISLDEMTRYLTSVFRVLFQVNP-DAQKVGVSPEELGQVTAEQAFAEADQDHDGRLTFEEFQEWYQQPGGIGEVAKDGEQLFSLDE------ARRLTKLGDFSPLEVFEALADCADEQGFVSKEAFDSCFRS-FIASKRGGIRGDEYERISAVLNRLFELFDVDKNGVVDFSEISSGLSVFCGGTSDEKVRAAFSLYDYNGDGFISLDEMTRYLTAVFKVLKEASP-------SSVSRVKDSPEELGARTAKQAFAEADLDHDGQLSFSEFRHWYLTSSTANIERLIENNIPEWLSLQEVRRLTNLGAFKPNEVLE----TFASF------ASEDGTLNKEAFRR---AFAELRTPSNDQQANDRLRLLVDRIFALFDTDHNGVVDFSELASGLSILCGGNDVDKVRAAFNLYDVNHDGFISMGEMRLYLTSVFKVLFEVNPE----------TQARMGVSPEELAAITA---EQAFAEADSDGDGRLSFEEFRVWYAQPDTAANQSHVPEWVSLQVVKEMTHLERYSPNDVFEVFANRCSEDGTISREAFEDCFEQL-----IDARFRNDE----------EHLNRLRL---ILDRLFTVFDTDGNGIVDFCELSSGLSVLCGGSREDKVRSAFALYDLNQDGFISLDEMVRYLTSVFKVLYETNPSTRQSLGVEPEELAVITAEQCFLEADLNHDGQLSFDEFVQWYSRSPDFQAPSAGVASLGTQQHLKRQEEARQSNGSKQSPHGKASSTGADNAEFESESYPTSKLYALRSGDNSPQLLSPRSAGLNMNSTSMERARRLLKLDTYEVNDIFEIFAEAA--PSGELNFANFKKCFDQIIKLAGGHETTEEKQEAEQMVRRLFRVFDTDKSNTVDFGELASGLSVLSGSNMDDKVRAAFQLYDINGDGFISQEEMISYMTSIFKVMYETSESAKQKMGVSPEELARVTAIQCFKEADLNNDNKXSFEEF 1048
[Close]
BLAST of mRNA_P-littoralis_Contig12.144.21 vs. uniprot
Match: W2ZEK2_PHYPR (Uncharacterized protein n=1 Tax=Phytophthora parasitica P10297 TaxID=1317064 RepID=W2ZEK2_PHYPR)

HSP 1 Score: 332 bits (850), Expect = 1.610e-89
Identity = 305/1113 (27.40%), Postives = 484/1113 (43.49%), Query Frame = 1 
Query:  505 LAELRRKLGICTFPAEDVLNALRSTAASDGKLTRAEF-DVFLKDLASLLESPTLSTSIQ-----------IFELFDEAGGGILHVHDLAAGLAVLCDGSVARSVRCACQLYRGAG-GDMGFVEISSFTLSILKVVYAASPANWAWPGMLPRELSAVMSSEFLIQKGLPLSGRVG---FEEWFASTIP-EEDERSCDDSYGDAWAHLLQGLQNHDMQVILELLAAFVDQHGGISSPAFFGCIRALFEVDGRGPLTDAETAKLKVALTRLFIMLDDHRLGTVPFGDLASGISAFCDKHDNETARALFDIHG-NEDGSIAEEDMRKLLVPFFKVMFEVDPHARNLTGTGTRRKSVDPESLAETIAACAFEDATLGPDGAMSFEGFYRWYSSSFEVPSSSVPVGDSPRSLASSDDALRTALDVGEVHRIFKLRDINAAGFIYGLSA-ASCQGRVSWISFLRYMHGFANARPLTEESRSAV-MMARKLFDVYDEDKQREVDLRVLASGLAILCKGSWKDRATALFSVLDTERQGSLSREDMRVYFSSTSKLLCSVQPSVLTSTNSSALTEAFGTSPEE--GVNETERFDE-----------RMFASLYSDMNNREGCRVTKGTSE-------------TLEQARQDTQLYTTPAAHTFGVLKDALNDQGRLTRPAMHRCLRQLRAMVHNQARHRENEKVKGAKGAVSEHTYSSAAAENVMNRLFDAVDVGNVGDVNFCEFASALSVLCGGSREEKMMAIFNLFHRSEGVGITVRDIATFTTSAFRVMYKLQPSLEGEVGITPEVLGNVTASNMMEEVEPNGDGRISPTNFGWWLSD----EGNPNGVRRTTAAGFACHSSRVDSVGEGSTQPDED-VTQHDGN------------------------ARAGFRGDQLEGQ----GHIVM----------------RARKLLCLDCFSVNDLLEILAEVAIMKQGALAQDDFWRCIGYVLQLGGTAEGTTEWDEAFLLTECIYHAFE-GNDGVVAFAAIACGVSILCQSTAEDKVLVAFLLLDTDGDGQLVFEEVSMYIASVLKVVYAIGQGVTAI--INPDELGAALATQCFKQAKLAIDDKKFLLEY 3549
            L E+++   +  +  E+V       A  DG L+R  F + F K ++      T ++ ++           +F+LFD    G +   +LA+GL+VLC G+  + V  A  L+   G G +   E++ +  S+ +V++  SP   +  G+ P EL  V + +   +      G++    F++W+       E  ++ +  +  A A  L  LQ      + E LA   D+ G +   +F  C R +   + +G  +D E  ++   L RLF + D  + G V F +++SG+S FC     E  RA F ++  N DG I+ E+M + L   F+V+ E  P      G    R+S  PE L    A  AF +A L  DG +SF  F +WY+ S       +   + P  L+           + EV R+  L   +A   +   +   +  G +   +F +    F      T+ESR  + ++  ++F+++D+D    VD   LASGL++LC GS  D+  A F++ D    G +S  +MR+Y +S  K+L  V P      +S A     G +PEE   +   + F E             F+  Y          V     E             +L+  +Q T L    A   F +  +  ++ G L+R A   C  QL   V  Q ++ E                S A    ++NRLF   D    G V+FCE  S LSVLCGGSREEK+ A F+L+  ++   I++ ++  +  S F+V+Y+  P  + ++G+ PE L  +TA     E + N DG++S   F  W S     E    GV        A   +  +S   GS   D   V    G+                        A   F  D++ G     G  ++                  R+LL LD + VND+LEI AE A    G L    F +C   +++L G  E T E  EA  +   ++  F+  N   V F  +A G+S+L  S+ +DKV  AF L D +GDG +  EE+  Y+ S+ KV+Y           ++P+EL    A QCFK+A L  D+K    E+
Sbjct: 1403 LNEIKQLTNLAQYEPEEVFEIFAGEADEDGLLSRDAFNESFRKVISGQKSKGTQASDVETQKKLQEVVDGLFDLFDTDNSGAVDFGELASGLSVLCGGTKDQKVEAAFSLFDFNGDGFISLDEMTRYLTSVFRVLFQVSPDTQSL-GVTPEELGEVTAQQAFAEADQDHDGQLTLKEFQQWYQQPGGIGEVAKNGEQLFSLAEARRLTNLQAFSPMEVFEALAECADEQGYVPRESFDKCFRKIISTN-QGIKSD-EYQRINTILNRLFELFDVDKNGMVDFSEISSGLSVFCGGSSEEKIRAAFALYDYNADGYISMEEMTRYLTSVFRVLKEASPSGLQQLG----RES--PEELGVRTAQQAFAEADLDHDGRLSFPEFRKWYTRSNAANMERLIQNNIPEWLS-----------LREVRRLTNLESFSAQQVLNTFAKFTAADGTMDKETFRQAFDHF-KVESATQESRDRLQLLVDRIFELFDKDSNGLVDFNELASGLSVLCGGSQADKVRAAFNLYDVNHDGYISLGEMRLYLTSVFKVLFEVNP------DSEA---RMGVTPEELGEITAEQAFVEADHDRDGKLSFEEFSQWYMQPKRVGDLPVPAVLGEQQQERKHQVPDWVSLDVVKQMTNLEKYTADEVFEIFANRCSENGTLSREAFEECFEQL---VDEQYKNDE---------------VSLARLRLILNRLFIIFDENQDGTVDFCELTSGLSVLCGGSREEKVRAAFSLYDLNQDGFISLDEMVRYLASVFKVLYETSPGTDRKLGVRPEELATITAEQCFLEADLNEDGKLSFDEFVAWYSKSSRFEAPAAGVSSILGQQQATKGNTSESQSNGSFSRDNSKVGSQSGSPAPESPRKTVWGAGKGPGPSGVSTAPVSFPSDKIYGMTGSNGDALLSPNSASALNMNSSNMEHVRQLLKLDTYEVNDVLEIFAEAA--PSGELTFAAFKKCFDQIIRLAGGHESTEERQEADAMIRRLFCVFDTDNSNTVDFGELASGLSVLSGSSMDDKVRAAFQLYDINGDGYITQEEMISYMTSIFKVMYETTDSTKTKMGVSPEELARVTAEQCFKEADLNGDNKLSFEEF 2465
[Close]
BLAST of mRNA_P-littoralis_Contig12.144.21 vs. uniprot
Match: W2ZBH8_PHYPR (Uncharacterized protein n=1 Tax=Phytophthora parasitica P10297 TaxID=1317064 RepID=W2ZBH8_PHYPR)

HSP 1 Score: 332 bits (850), Expect = 1.610e-89
Identity = 305/1113 (27.40%), Postives = 484/1113 (43.49%), Query Frame = 1 
Query:  505 LAELRRKLGICTFPAEDVLNALRSTAASDGKLTRAEF-DVFLKDLASLLESPTLSTSIQ-----------IFELFDEAGGGILHVHDLAAGLAVLCDGSVARSVRCACQLYRGAG-GDMGFVEISSFTLSILKVVYAASPANWAWPGMLPRELSAVMSSEFLIQKGLPLSGRVG---FEEWFASTIP-EEDERSCDDSYGDAWAHLLQGLQNHDMQVILELLAAFVDQHGGISSPAFFGCIRALFEVDGRGPLTDAETAKLKVALTRLFIMLDDHRLGTVPFGDLASGISAFCDKHDNETARALFDIHG-NEDGSIAEEDMRKLLVPFFKVMFEVDPHARNLTGTGTRRKSVDPESLAETIAACAFEDATLGPDGAMSFEGFYRWYSSSFEVPSSSVPVGDSPRSLASSDDALRTALDVGEVHRIFKLRDINAAGFIYGLSA-ASCQGRVSWISFLRYMHGFANARPLTEESRSAV-MMARKLFDVYDEDKQREVDLRVLASGLAILCKGSWKDRATALFSVLDTERQGSLSREDMRVYFSSTSKLLCSVQPSVLTSTNSSALTEAFGTSPEE--GVNETERFDE-----------RMFASLYSDMNNREGCRVTKGTSE-------------TLEQARQDTQLYTTPAAHTFGVLKDALNDQGRLTRPAMHRCLRQLRAMVHNQARHRENEKVKGAKGAVSEHTYSSAAAENVMNRLFDAVDVGNVGDVNFCEFASALSVLCGGSREEKMMAIFNLFHRSEGVGITVRDIATFTTSAFRVMYKLQPSLEGEVGITPEVLGNVTASNMMEEVEPNGDGRISPTNFGWWLSD----EGNPNGVRRTTAAGFACHSSRVDSVGEGSTQPDED-VTQHDGN------------------------ARAGFRGDQLEGQ----GHIVM----------------RARKLLCLDCFSVNDLLEILAEVAIMKQGALAQDDFWRCIGYVLQLGGTAEGTTEWDEAFLLTECIYHAFE-GNDGVVAFAAIACGVSILCQSTAEDKVLVAFLLLDTDGDGQLVFEEVSMYIASVLKVVYAIGQGVTAI--INPDELGAALATQCFKQAKLAIDDKKFLLEY 3549
            L E+++   +  +  E+V       A  DG L+R  F + F K ++      T ++ ++           +F+LFD    G +   +LA+GL+VLC G+  + V  A  L+   G G +   E++ +  S+ +V++  SP   +  G+ P EL  V + +   +      G++    F++W+       E  ++ +  +  A A  L  LQ      + E LA   D+ G +   +F  C R +   + +G  +D E  ++   L RLF + D  + G V F +++SG+S FC     E  RA F ++  N DG I+ E+M + L   F+V+ E  P      G    R+S  PE L    A  AF +A L  DG +SF  F +WY+ S       +   + P  L+           + EV R+  L   +A   +   +   +  G +   +F +    F      T+ESR  + ++  ++F+++D+D    VD   LASGL++LC GS  D+  A F++ D    G +S  +MR+Y +S  K+L  V P      +S A     G +PEE   +   + F E             F+  Y          V     E             +L+  +Q T L    A   F +  +  ++ G L+R A   C  QL   V  Q ++ E                S A    ++NRLF   D    G V+FCE  S LSVLCGGSREEK+ A F+L+  ++   I++ ++  +  S F+V+Y+  P  + ++G+ PE L  +TA     E + N DG++S   F  W S     E    GV        A   +  +S   GS   D   V    G+                        A   F  D++ G     G  ++                  R+LL LD + VND+LEI AE A    G L    F +C   +++L G  E T E  EA  +   ++  F+  N   V F  +A G+S+L  S+ +DKV  AF L D +GDG +  EE+  Y+ S+ KV+Y           ++P+EL    A QCFK+A L  D+K    E+
Sbjct: 1403 LNEIKQLTNLAQYEPEEVFEIFAGEADEDGLLSRDAFNESFRKVISGQKSKGTQASDVETQKKLQEVVDGLFDLFDTDNSGAVDFGELASGLSVLCGGTKDQKVEAAFSLFDFNGDGFISLDEMTRYLTSVFRVLFQVSPDTQSL-GVTPEELGEVTAQQAFAEADQDHDGQLTLKEFQQWYQQPGGIGEVAKNGEQLFSLAEARRLTNLQAFSPMEVFEALAECADEQGYVPRESFDKCFRKIISTN-QGIKSD-EYQRINTILNRLFELFDVDKNGMVDFSEISSGLSVFCGGSSEEKIRAAFALYDYNADGYISMEEMTRYLTSVFRVLKEASPSGLQQLG----RES--PEELGVRTAQQAFAEADLDHDGRLSFPEFRKWYTRSNAANMERLIQNNIPEWLS-----------LREVRRLTNLESFSAQQVLNTFAKFTAADGTMDKETFRQAFDHF-KVESATQESRDRLQLLVDRIFELFDKDSNGLVDFNELASGLSVLCGGSQADKVRAAFNLYDVNHDGYISLGEMRLYLTSVFKVLFEVNP------DSEA---RMGVTPEELGEITAEQAFVEADHDRDGKLSFEEFSQWYMQPKRVGDLPVPAVLGEQQQERKHQVPDWVSLDVVKQMTNLEKYTADEVFEIFANRCSENGTLSREAFEECFEQL---VDEQYKNDE---------------VSLARLRLILNRLFIIFDENQDGTVDFCELTSGLSVLCGGSREEKVRAAFSLYDLNQDGFISLDEMVRYLASVFKVLYETSPGTDRKLGVRPEELATITAEQCFLEADLNEDGKLSFDEFVAWYSKSSRFEAPAAGVSSILGQQQATKGNTSESQSNGSFSRDNSKVGSQSGSPAPESPRKTVWGAGKGPGPSGVSTAPVSFPSDKIYGMTGSNGDALLSPNSASALNMNSSNMEHVRQLLKLDTYEVNDVLEIFAEAA--PSGELTFAAFKKCFDQIIRLAGGHESTEERQEADAMIRRLFCVFDTDNSNTVDFGELASGLSVLSGSSMDDKVRAAFQLYDINGDGYITQEEMISYMTSIFKVMYETTDSTKTKMGVSPEELARVTAEQCFKEADLNGDNKLSFEEF 2465
[Close]
BLAST of mRNA_P-littoralis_Contig12.144.21 vs. uniprot
Match: W2Q9D3_PHYPN (Uncharacterized protein n=19 Tax=Phytophthora TaxID=4783 RepID=W2Q9D3_PHYPN)

HSP 1 Score: 332 bits (850), Expect = 1.610e-89
Identity = 305/1113 (27.40%), Postives = 484/1113 (43.49%), Query Frame = 1 
Query:  505 LAELRRKLGICTFPAEDVLNALRSTAASDGKLTRAEF-DVFLKDLASLLESPTLSTSIQ-----------IFELFDEAGGGILHVHDLAAGLAVLCDGSVARSVRCACQLYRGAG-GDMGFVEISSFTLSILKVVYAASPANWAWPGMLPRELSAVMSSEFLIQKGLPLSGRVG---FEEWFASTIP-EEDERSCDDSYGDAWAHLLQGLQNHDMQVILELLAAFVDQHGGISSPAFFGCIRALFEVDGRGPLTDAETAKLKVALTRLFIMLDDHRLGTVPFGDLASGISAFCDKHDNETARALFDIHG-NEDGSIAEEDMRKLLVPFFKVMFEVDPHARNLTGTGTRRKSVDPESLAETIAACAFEDATLGPDGAMSFEGFYRWYSSSFEVPSSSVPVGDSPRSLASSDDALRTALDVGEVHRIFKLRDINAAGFIYGLSA-ASCQGRVSWISFLRYMHGFANARPLTEESRSAV-MMARKLFDVYDEDKQREVDLRVLASGLAILCKGSWKDRATALFSVLDTERQGSLSREDMRVYFSSTSKLLCSVQPSVLTSTNSSALTEAFGTSPEE--GVNETERFDE-----------RMFASLYSDMNNREGCRVTKGTSE-------------TLEQARQDTQLYTTPAAHTFGVLKDALNDQGRLTRPAMHRCLRQLRAMVHNQARHRENEKVKGAKGAVSEHTYSSAAAENVMNRLFDAVDVGNVGDVNFCEFASALSVLCGGSREEKMMAIFNLFHRSEGVGITVRDIATFTTSAFRVMYKLQPSLEGEVGITPEVLGNVTASNMMEEVEPNGDGRISPTNFGWWLSD----EGNPNGVRRTTAAGFACHSSRVDSVGEGSTQPDED-VTQHDGN------------------------ARAGFRGDQLEGQ----GHIVM----------------RARKLLCLDCFSVNDLLEILAEVAIMKQGALAQDDFWRCIGYVLQLGGTAEGTTEWDEAFLLTECIYHAFE-GNDGVVAFAAIACGVSILCQSTAEDKVLVAFLLLDTDGDGQLVFEEVSMYIASVLKVVYAIGQGVTAI--INPDELGAALATQCFKQAKLAIDDKKFLLEY 3549
            L E+++   +  +  E+V       A  DG L+R  F + F K ++      T ++ ++           +F+LFD    G +   +LA+GL+VLC G+  + V  A  L+   G G +   E++ +  S+ +V++  SP   +  G+ P EL  V + +   +      G++    F++W+       E  ++ +  +  A A  L  LQ      + E LA   D+ G +   +F  C R +   + +G  +D E  ++   L RLF + D  + G V F +++SG+S FC     E  RA F ++  N DG I+ E+M + L   F+V+ E  P      G    R+S  PE L    A  AF +A L  DG +SF  F +WY+ S       +   + P  L+           + EV R+  L   +A   +   +   +  G +   +F +    F      T+ESR  + ++  ++F+++D+D    VD   LASGL++LC GS  D+  A F++ D    G +S  +MR+Y +S  K+L  V P      +S A     G +PEE   +   + F E             F+  Y          V     E             +L+  +Q T L    A   F +  +  ++ G L+R A   C  QL   V  Q ++ E                S A    ++NRLF   D    G V+FCE  S LSVLCGGSREEK+ A F+L+  ++   I++ ++  +  S F+V+Y+  P  + ++G+ PE L  +TA     E + N DG++S   F  W S     E    GV        A   +  +S   GS   D   V    G+                        A   F  D++ G     G  ++                  R+LL LD + VND+LEI AE A    G L    F +C   +++L G  E T E  EA  +   ++  F+  N   V F  +A G+S+L  S+ +DKV  AF L D +GDG +  EE+  Y+ S+ KV+Y           ++P+EL    A QCFK+A L  D+K    E+
Sbjct: 1408 LNEIKQLTNLAQYEPEEVFEIFAGEADEDGLLSRDAFNESFRKVISGQKSKGTQASDVETQKKLQEVVDGLFDLFDTDNSGAVDFGELASGLSVLCGGTKDQKVEAAFSLFDFNGDGFISLDEMTRYLTSVFRVLFQVSPDTQSL-GVTPEELGEVTAQQAFAEADQDHDGQLTLKEFQQWYQQPGGIGEVAKNGEQLFSLAEARRLTNLQAFSPMEVFEALAECADEQGYVPRESFDKCFRKIISTN-QGIKSD-EYQRINTILNRLFELFDVDKNGMVDFSEISSGLSVFCGGSSEEKIRAAFALYDYNADGYISMEEMTRYLTSVFRVLKEASPSGLQQLG----RES--PEELGVRTAQQAFAEADLDHDGRLSFPEFRKWYTRSNAANMERLIQNNIPEWLS-----------LREVRRLTNLESFSAQQVLNTFAKFTAADGTMDKETFRQAFDHF-KVESATQESRDRLQLLVDRIFELFDKDSNGLVDFNELASGLSVLCGGSQADKVRAAFNLYDVNHDGYISLGEMRLYLTSVFKVLFEVNP------DSEA---RMGVTPEELGEITAEQAFVEADHDRDGKLSFEEFSQWYMQPKRVGDLPVPAVLGEQQQERKHQVPDWVSLDVVKQMTNLEKYTADEVFEIFANRCSENGTLSREAFEECFEQL---VDEQYKNDE---------------VSLARLRLILNRLFIIFDENQDGTVDFCELTSGLSVLCGGSREEKVRAAFSLYDLNQDGFISLDEMVRYLASVFKVLYETSPGTDRKLGVRPEELATITAEQCFLEADLNEDGKLSFDEFVAWYSKSSRFEAPAAGVSSILGQQQATKGNTSESQSNGSFSRDNSKVGSQSGSPAPESPRKTVWGAGKGPGPSGVSTAPVSFPSDKIYGMTGSNGDALLSPNSASALNMNSSNMEHVRQLLKLDTYEVNDVLEIFAEAA--PSGELTFAAFKKCFDQIIRLAGGHESTEERQEADAMIRRLFCVFDTDNSNTVDFGELASGLSVLSGSSMDDKVRAAFQLYDINGDGYITQEEMISYMTSIFKVMYETTDSTKTKMGVSPEELARVTAEQCFKEADLNGDNKLSFEEF 2470
[Close]
BLAST of mRNA_P-littoralis_Contig12.144.21 vs. uniprot
Match: A0A6G0SMC9_9STRA (Uncharacterized protein n=7 Tax=Phytophthora TaxID=4783 RepID=A0A6G0SMC9_9STRA)

HSP 1 Score: 329 bits (843), Expect = 1.210e-88
Identity = 307/1124 (27.31%), Postives = 481/1124 (42.79%), Query Frame = 1 
Query:  505 LAELRRKLGICTFPAEDVLNALRSTAASDGKLTRAEFDVFL-------KDLASLLESPTLSTSIQ-----IFELFDEAGGGILHVHDLAAGLAVLCDGSVARSVRCACQLYRGAG-GDMGFVEISSFTLSILKVVYAASPANWAWPGMLPRELSAVMSSEFLIQKGLPLSGRVG---FEEWFASTIP-EEDERSCDDSYGDAWAHLLQGLQNHDMQVILELLAAFVDQHGGISSPAFFGCIRALFEVDGRGPLTDAETAKLKVALTRLFIMLDDHRLGTVPFGDLASGISAFCDKHDNETARALFDIHG-NEDGSIAEEDMRKLLVPFFKVMFEVDPHARNLTGTGTRRKSVDPESLAETIAACAFEDATLGPDGAMSFEGFYRWYSSSFEVPSSSVPVGDSPRSLASSDDALRTALDVGEVHRIFKLRDINAAGFIYGLSA-ASCQGRVSWISFLRYMHGFANARPLTEESRSAV-MMARKLFDVYDEDKQREVDLRVLASGLAILCKGSWKDRATALFSVLDTERQGSLSREDMRVYFSSTSKLLCSVQPSVLTSTNSSALTEA-FGTSPEE--GVNETERFDER-----------MFASLY----------------------SDMNNREGCRVTKGTSETLEQARQDTQLYTTPAAHTFGVLKDALNDQGRLTRPAMHRCLRQLRAMVHNQARHRENEKVKGAKGAVSEHTYSSAAAENVMNRLFDAVDVGNVGDVNFCEFASALSVLCGGSREEKMMAIFNLFHRSEGVGITVRDIATFTTSAFRVMYKLQPSLEGEVGITPEVLGNVTASNMMEEVEPNGDGRISPTNFGWWLSD----EGNPNGVRRTTAA----GFACHSSRVDSVGEGSTQPDEDVTQHDGN---------------------------------ARAGFRGDQLEGQGHI---------VMRARKLLCLDCFSVNDLLEILAEVAIMKQGALAQDDFWRCIGYVLQLGGTAEGTTEWDEAFLLTECIYHAFE-GNDGVVAFAAIACGVSILCQSTAEDKVLVAFLLLDTDGDGQLVFEEVSMYIASVLKVVYAIGQGVTAI--INPDELGAALATQCFKQAKLAIDDKKFLLEY 3549
            L E+++   +  +  E+V       A  DG L+R  F+          K   +   SP +   +Q     +F+LFD    G +   +LA+GL+VLC G+  + V  A  L+   G G +   E++ +  S+ +V++  SP   +  G+ P EL  V + +   +      G++    F+ W+       E  ++ +  +  A A  L  LQ      + E LA   D+ G +S  AF  C R +   + +G +   E  ++   L RLF + D  + G V F +++SG+S FC     E  RA F ++  N DG I+ E+M + L   F+V+ E  P A        +     PE L    A  AF +A L  DG +SF  F RWY+ S       +   + P  L+           + EV R+  L   +A   +   +   S  G +   +F R   G       TE++   + M+  ++F+++D+D    VD   LASGL++LC GS  D+  A F++ D    G +S  +MR+Y +S  K+L  V P           TEA  G +PEE   V   + F E             F+  Y                           ++  RV    +  L+  +Q T L    A   F +  +  ++ G L+R A   C  QL   V  Q ++ E                + A    ++NRLF   D    G V+FCE  S LSVLCGGSR+EK+ A F+L+  ++   I++ ++  +  S F+V+Y+  P  + ++G+ PE L  +TA     E + N DG++S   F  W S     E    GV    A     G   ++S   S G    +  +  +QH G+                                 A  G  GD L               +   R+LL LD + VND+LEI AE A    G L    F +C   +++L G  +   E  EA ++   ++  F+  N   V F  +A G+S+L  S+ +DKV  AF L D +GDG +  EE+  Y  S+ KV+Y           ++P+EL  A A QCFK+A L  D+K    E+
Sbjct: 1418 LNEIKQLTNLAQYEPEEVFEIFAGEADEDGLLSRDAFNESFRKVIDGQKSKGTRAASPDMQKKLQEVIDGLFDLFDRDNSGAVDFGELASGLSVLCGGTKDQKVEAAFSLFDFNGDGFISLDEMTRYLTSVFRVLFQVSPDTQSL-GVTPEELGEVTAQQAFAEADQDHDGQLTLKEFQHWYQQPGGIGEVAKNGEQLFSLAEARRLTNLQAFSPMEVFEALAECADEQGYVSREAFDNCFREIISTN-QG-IRSEEYQRINPILNRLFELFDVDKNGMVDFSEISSGLSVFCGGSSEEKIRAAFALYDYNADGYISMEEMTRYLTSVFRVLKEGSPSALQ------QMDRESPEELGVRTAQQAFAEADLDNDGRLSFPEFRRWYTRSSAANMERLIQNNIPEWLS-----------LREVRRLTNLGSFSAQQVLNTFAKFTSADGTMDKETF-RQAFGHFRVDSATEKTEERLEMLVDRIFELFDKDSNGLVDFNELASGLSVLCGGSQTDKVRAAFNLYDANHDGYISLGEMRLYLTSVFKVLFEVNPD----------TEARMGVTPEELGEVTAEQAFVEADLDKDGKLSFAEFSQWYMQPKQVGDLPMPAVLGAPEQQQQQQKAKQPQRVPDWVN--LDVVKQMTNLEKYTADEVFEIFANRCSEDGTLSREAFEECFEQL---VDEQYKNDEA---------------NLARLRLILNRLFVIFDEDRSGTVDFCELCSGLSVLCGGSRDEKVRAAFSLYDLNQDGFISLDEMVRYLASVFKVLYETSPGTDEKLGVQPEELATITAEQCFLEADLNEDGKLSFDEFVVWYSKSAGFEAPAAGVGTILAQDNRQGVNGNTSESRSDGSVHQESSKGGSQHSGSPAPESPRKTVWGAEKGPTSSSAPAVSFPSDKIYAMTGSNGDALLSPSSASALNMNSSNMEHVRQLLKLDTYEVNDVLEIFAEAA--PSGELTFAAFKKCFDQIIRLAGGHDAPEERQEADVMIRRLFRVFDTDNSNTVDFGELASGLSVLSGSSMDDKVSAAFQLYDINGDGYITQEEMISYTTSIFKVMYETTDSTKTKMGVSPEELARATAEQCFKEADLNGDNKLSFEEF 2488
[Close]
BLAST of mRNA_P-littoralis_Contig12.144.21 vs. uniprot
Match: G4YZI8_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YZI8_PHYSP)

HSP 1 Score: 327 bits (837), Expect = 6.640e-88
Identity = 308/1132 (27.21%), Postives = 490/1132 (43.29%), Query Frame = 1 
Query:  505 LAELRRKLGICTFPAEDVLNALRSTAASDGKLTRAEF-DVFLKDLA------SLLESPTLSTSIQ-----IFELFDEAGGGILHVHDLAAGLAVLCDGSVARSVRCACQLYRGAG-GDMGFVEISSFTLSILKVVYAASPANWAWPGMLPRELSAVMSSEFLIQKGLPLSGRVG---FEEWFASTIP-EEDERSCDDSYGDAWAHLLQGLQNHDMQVILELLAAFVDQHGGISSPAFFGCIRALFEVDGRGPLTDAETAKLKVALTRLFIMLDDHRLGTVPFGDLASGISAFCDKHDNETARALFDIHG-NEDGSIAEEDMRKLLVPFFKVMFEVDPHARNLTGTGTRRKSVDPESLAETIAACAFEDATLGPDGAMSFEGFYRWYSSSFEVPSSSVPVGDSPRSLASSDDALRTALDVGEVHRIFKLRDINAAGFIYGLSA-ASCQGRVSWISFLRYMHGFANARPLTEESRSAV-MMARKLFDVYDEDKQREVDLRVLASGLAILCKGSWKDRATALFSVLDTERQGSLSREDMRVYFSSTSKLLCSVQPSVLTSTNSSALTEAFGTSPEE--GVNETERF-------DERMFASLYSDM-------------------------------NNREGCRVTKGTSETLEQARQDTQLYTTPAAHTFGVLKDALNDQGRLTRPAMHRCLRQLRAMVHNQARHRENEKVKGAKGAVSEHTYSSAAAENVMNRLFDAVDVGNVGDVNFCEFASALSVLCGGSREEKMMAIFNLFHRSEGVGITVRDIATFTTSAFRVMYKLQPSLEGEVGITPEVLGNVTASNMMEEVEPNGDGRISPTNFGWWLSD----EGNPNGVRRTTAA-----GFACHSSRVDSVGEGSTQPDEDVTQHDGN-------------------------ARAGFRGDQLEGQ----GHIVM----------------RARKLLCLDCFSVNDLLEILAEVAIMKQGALAQDDFWRCIGYVLQLGGTAEGTTEWDEAFLLTECIYHAFE-GNDGVVAFAAIACGVSILCQSTAEDKVLVAFLLLDTDGDGQLVFEEVSMYIASVLKVVYAIGQGVTAI--INPDELGAALATQCFKQAKLAIDDKKFLLEY 3549
            L E+++   +  +  E+V       A  +G L+R  F + F K +A      +   SP     +Q     +F+LFD    G +   +LA+GL+VLC G+  + V  A  L+   G G +   E++ +  S+ +V++  SP   +  G+ P EL  V + +   +      G++    F+ W+       E  ++ +  +  A A  L  LQ      + E LA   D+ G +S  AF  C R +   + +G +   E  ++   L RLF + D  + G V F +++SG+S FC     E  RA F ++  N DG I+ E+M + L   F+V+ E  P A        +     PE L    A  AF +A L  DG +SF  F +WY+ S       +   + P  L+           + EV R+  L   +A   +   +   S  G +   +F R   G       TE++   + M+  ++F+++D+D    VD   LASGL++LC GS  D+  A F++ D    G +S  +MR+Y +S  K+L  V P      +S A     G +PEE   +   + F       D R+  S +S+                                  ++  R+    S  L+  +Q T L    A   F +  +  ++ G L+R A   C  QL   V  Q ++ E                +      ++NRLF   D  + G V+FCE  S LSVLCGGSREEK+ A F+L+  ++   I++ ++  +  S F+V+Y+  P  + ++G+ PE L  +TA     E + N DG++S   F  W S     E    GV  T  A     G   + S   S G    Q  +  +QH G+                         A   F  D++ G     G  ++                  R+LL LD + VND+LEI AE A    G L    F +C   +++L G  +   E  EA ++   ++  F+  N   V F  +A G+S+L  S+ +DKV  AF L D +GDG +  EE+  Y+ S+ KV+Y           ++P+EL  A A QCFK+A L  D+K    E+
Sbjct: 1339 LNEIKQLTNLAQYEPEEVFEIFAGEADENGLLSRDAFNESFRKVIAGQKAKGARATSPETQKKLQEVIDGLFDLFDRDNSGAVDFGELASGLSVLCGGTKDQKVEAAFSLFDFNGDGFISLDEMTRYLTSVFRVLFQVSPDTQSL-GVTPEELGEVTAQQAFAEADQDHDGQLTLKEFQHWYQQPGGIGEVAKNGEQLFSLAEARRLTNLQAFSPMEVFETLAECADEQGYVSREAFDNCFRKIISTN-QG-IKSEEYQRINPILNRLFELFDVDKNGMVDFSEISSGLSVFCGGSSEEKIRAAFALYDYNADGYISMEEMTRYLTSVFRVLKEASPSAL------PQIDQESPEELGVRTAEQAFAEADLDNDGRLSFPEFRKWYTRSSAANMERLIQNNIPEWLS-----------LREVRRLTNLGSFSAQQVLNTFAKFTSADGTMDKETF-RQAFGHFQVESATEQAEDRLQMLVDRIFELFDKDNNGLVDFNELASGLSVLCGGSQTDKVRAAFNLYDVNHDGYISLGEMRLYLTSVFKVLFEVNP------DSEA---RMGVTPEELGEITAEQAFVEADLDKDGRLSFSEFSEWYMQPKKVGDLPMPAVLGEPEEQQXXXXXXXXXGKQQQRIPDWVS--LDVVKQMTNLEKYTADEVFEIFANRCSEDGTLSREAFEECFEQL---VDEQYKNDEA---------------NLTRLRLILNRLFVIFDEDHNGTVDFCELCSGLSVLCGGSREEKVRAAFSLYDLNQDGFISLDEMVRYLASVFKVLYETSPGTDEKLGVQPEELATITAEQCFLEADLNEDGKLSFDAFVIWYSKSAGFEAPAAGVGTTILAQNGRQGVNGNVSESRSGGSVHQQSSKGGSQHSGSPAPAPESPRKTMWGAGKGPNTNASTAPVSFPSDKIYGMTGSNGDALLSPNSASALNMNSSNMEHVRQLLKLDTYEVNDVLEIFAEAA--PSGELTFAAFKKCFDQIIRLAGGHDSPEERQEADVMIRRLFRVFDTDNSNTVDFGELASGLSVLSGSSMDDKVRAAFQLYDINGDGYITQEEMISYMTSIFKVMYETTDSTKTKMGVSPEELARATAEQCFKEADLNGDNKLSFEEF 2418
[Close]
BLAST of mRNA_P-littoralis_Contig12.144.21 vs. uniprot
Match: H3GGD8_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GGD8_PHYRM)

HSP 1 Score: 327 bits (837), Expect = 6.700e-88
Identity = 307/1124 (27.31%), Postives = 487/1124 (43.33%), Query Frame = 1 
Query:  505 LAELRRKLGICTFPAEDVLNALRSTAASDGKLTRAEF-DVFLKDLA------SLLESPTLSTSIQ-----IFELFDEAGGGILHVHDLAAGLAVLCDGSVARSVRCACQLYRGAG-GDMGFVEISSFTLSILKVVYAASPANWAWPGMLPRELSAVMSSEFLIQKGLPLSGRVG---FEEWFASTIP-EEDERSCDDSYGDAWAHLLQGLQNHDMQVILELLAAFVDQHGGISSPAFFGCIRALFEVDGRGPLTDAETAKLKVALTRLFIMLDDHRLGTVPFGDLASGISAFCDKHDNETARALFDIHG-NEDGSIAEEDMRKLLVPFFKVMFEVDPHARNLTGTGTRRKSVDPESLAETIAACAFEDATLGPDGAMSFEGFYRWYSSSFEVPSSSVPVGDSPRSLASSDDALRTALDVGEVHRIFKLRDINAAGFIYGLSA-ASCQGRVSWISFLRYMHGFANARPLTEESRSAV-MMARKLFDVYDEDKQREVDLRVLASGLAILCKGSWKDRATALFSVLDTERQGSLSREDMRVYFSSTSKLLCSVQPSVLTSTNSSALTEAFGTSPEEGVNET----------ERFDERMFAS-------------------LYSDMNNREGCRVTKGTSE--TLEQARQDTQLYTTPAAHTFGVLKDALNDQGRLTRPAMHRCLRQLRAMVHNQARHRENEKVKGAKGAVSEHTYSSAAAENVMNRLFDAVDVGNVGDVNFCEFASALSVLCGGSREEKMMAIFNLFHRSEGVGITVRDIATFTTSAFRVMYKLQPSLEGEVGITPEVLGNVTASNMMEEVEPNGDGRISPTNFGWWLSD----EGNPNGVRRTTA----AGFACHSSRVDSVGEGSTQPDEDV--TQHDGNARA-------------------------GFRGDQLEG----QGHIVM----------------RARKLLCLDCFSVNDLLEILAEVAIMKQGALAQDDFWRCIGYVLQLGGTAEGTTEWDEAFLLTECIYHAFE-GNDGVVAFAAIACGVSILCQSTAEDKVLVAFLLLDTDGDGQLVFEEVSMYIASVLKVVYAIGQGVTAI--INPDELGAALATQCFKQAKLAIDDKKFLLEY 3549
            L E+++   +  +  E+V       A  DG L+R  F + F K  A      S + SP   T +Q     +F+LFD    G +   +LA+GL+VLC G+  + V  A  L+   G G +   E++ +  S+ +V++  SP   A  G+ P EL  V + +   +      G++    F+ W+       E  ++ +  +  A A  L  LQ      + E LA   D+ G +S  AF  C R  F     G +   E  ++   L RLF + D  + G V F +++SG+S FC     E  RA F ++  N DG I+ E+M + L   F+V+ E  P A        +     PE L    A  AF +A L  DG +SF  F +WY+ S       +   + P  L+           + EV R+  L   +A   +   +   S  G +   +F R   G       T+++   + ++  ++FD++D D    VD   LASGL++LC GS  D+  A F++ D    G +S  +MR+Y +S  K+L  V P      +S A     G +PEE    T          +R  +  FA                    L      ++  +  +G  +  +L+  +Q T L    A   F +  +  ++ G L+R A   C  QL   V  Q ++ E                +      ++NRLF   D  + G V+FCE +S LSVLCGGSREEK+ A F+L+  ++   I++ ++  +  S F+V+Y+  P  + ++G+ P+ L  +TA     E + N DG++S   F  W S     E    GV    A         + +  ++  EGS  P+ +     H  ++ A                          F  D++ G     G  ++                  R+LL LD + VND+LEI AE A    G L    F +C   +++L G  +   E  EA  +   ++  F+  N   V F  +A G+S+L  S+ +DKV  AF L D +GDG +  EE+  Y+ S+ KV+Y           ++PDEL  A A QCFK+A L  D+K    E+
Sbjct: 1361 LNEIKQLTNLAQYEPEEVFEIFAGEADEDGLLSRDAFNESFRKVFAGQNSKGSRVSSPETQTKLQEVVDGLFDLFDRDNSGAVDFGELASGLSVLCGGTKDQKVEAAFSLFDFNGDGFISLDEMTRYLTSVFRVLFQVSPDTQAL-GVTPEELGEVTAQQAFAEADQDHDGQLTLKEFQHWYQQPGGIGEVAKNGEQLFSIAEARRLTNLQAFSPMEVFETLAECADEQGYVSREAFDDCFRK-FIATNEG-IKSEEYQRINPILNRLFELFDVDKNGMVDFSEMSSGLSVFCGGSSEEKIRAAFALYDYNADGFISMEEMTRYLTSVFRVLKEASPAALQ------QMNRESPEELGVRTAQQAFAEADLDHDGRLSFSEFRKWYTQSSAANMERLIQNNIPEWLS-----------LREVRRLTNLGSFSAQQVLNTFAKFTSADGAMDKETF-RQAFGHFKVESTTKQTDDRLQLLVDRIFDLFDRDNNGLVDFNELASGLSVLCGGSQTDKVRAAFNLYDVNHDGYISLGEMRLYLTSVFKVLFEVNP------DSEA---QMGVTPEELGEITAEQAFVEADHDRDGKLSFAEFSQWYMQPKRVGDLPIPAVLGEHEQQQQEQKQPEGVPDWVSLDVVKQMTNLEKYTADEVFEIFANRCSEDGTLSREAFEECFEQL---VDEQYKNDE---------------VNLTRLRLILNRLFVIFDEDHNGAVDFCELSSGLSVLCGGSREEKVRAAFSLYDLNQDGFISLDEMVRYLASVFKVLYETSPGTDEKLGVQPDELATITAEQCFLEADLNTDGKLSFDEFVTWYSKSSGFEAPAAGVSSILAQQKDGRQGVNGNTTENRSEGSLPPENNKGSRSHHSSSPAPESPRKTMWGAGKALNSSVMSTPPVSFPSDKIYGVTGSNGDALLSPNSASALNMNSSNMEHVRQLLKLDTYEVNDVLEIFAEAA--PSGELTFAAFKKCFDQIIRLAGGHDLPEERQEADTMIRRLFRVFDTDNSNTVDFGELASGLSVLSGSSMDDKVRAAFQLYDINGDGYITQEEMINYMTSIFKVMYETTDSTKTKMGVSPDELARATAEQCFKEADLNGDNKLSFEEF 2434
[Close]
BLAST of mRNA_P-littoralis_Contig12.144.21 vs. uniprot
Match: D0N1M0_PHYIT (Uncharacterized protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0N1M0_PHYIT)

HSP 1 Score: 325 bits (832), Expect = 2.760e-87
Identity = 303/1102 (27.50%), Postives = 484/1102 (43.92%), Query Frame = 1 
Query:  505 LAELRRKLGICTFPAEDVLNALRSTAASDGKLTRAEFDVFLKDLASLLESPTLSTSIQ------------IFELFDEAGGGILHVHDLAAGLAVLCDGSVARSVRCACQLYRGAG-GDMGFVEISSFTLSILKVVYAASPANWAWPGMLPRELSAVMSSEFLIQKGLPLSGRVGFEE---WFASTIP-EEDERSCDDSYGDAWAHLLQGLQNHDMQVILELLAAFVDQHGGISSPAFFGCIRALFEVDGRGPLTDAETAKLKVALTRLFIMLDDHRLGTVPFGDLASGISAFCDKHDNETARALFDIHG-NEDGSIAEEDMRKLLVPFFKVMFEVDPHARNLTGTGTRRKSVDPESLAETIAACAFEDATLGPDGAMSFEGFYRWYSSSFEVPSSSVPVGDSPRSLASSDDALRTALDVGEVHRIFKLRDINAAGFIYGLSA-ASCQGRVSWISFLRYMHGFANARPLTEESRSAVMMARKLFDVYDEDKQREVDLRVLASGLAILCKGSWKDRATALFSVLDTERQGSLSREDMRVYFSSTSKLLCSVQPSV-----LTSTNSSALT--EAFGTSPEE--GVNETERFDERMF-----------ASLYSDMNNREGCRVTKGTSE--TLEQARQDTQLYTTPAAHTFGVLKDALNDQGRLTRPAMHRCLRQLRAMVHNQARHRENEKVKGAKGAVSEHTYSSAAAENVMNRLFDAVDVGNVGDVNFCEFASALSVLCGGSREEKMMAIFNLFHRSEGVGITVRDIATFTTSAFRVMYKLQPSLEGEVGITPEVLGNVTASNMMEEVEPNGDGRISPTNFGWWLSDE--------------GNPNGVRRTTA-----AGFACHSSRVDS----------------VGEG------STQP-----DE--DVTQHDGNARAGFRG-DQLEGQGHIVMRARKLLCLDCFSVNDLLEILAEVAIMKQGALAQDDFWRCIGYVLQLGGTAEGTTEWDEAFLLTECIYHAFEGNDG-VVAFAAIACGVSILCQSTAEDKVLVAFLLLDTDGDGQLVFEEVSMYIASVLKVVYAIGQGVTAII--NPDELGAALATQCFKQAKLAIDDK 3531
            L E+++   +  +  E+V       A  DG L+R  F+   + +    +S    TS              +F+LFD    G +   +LA+GL+VLC G+  + V+ A  L+   G G +   E++ +  S+ +V++  SP   +  G+ P EL  V + +   +      G++  EE   W+       E  ++ +  +  A A  L  LQ+     + E LA   D+ G +S  AF  C R +   + +G +   E  ++   L RLF + D  + G V F +++SG+S FC     E  RA F ++  N DG I+ E+M + L   F+V+ E  P      G    R+S  PE L    A  AF +A L  DG +SF  F +WY+ S       +   + P  L+           + EV R+  L   +A   +   +   +  G +   +F +    F     + E      ++  ++F+++D+D+   VD   LASGL++LC GS  D+  A F++ D    G +S  +MR+Y +S  K+L  V P       +T      +T  +AF  +  +  G    E F +              A L      ++  +V +   +  +L+  +Q T L    A   F +  +  ++ G L+R A   C  QL   V  Q ++ E                S      ++NRLF   D    G V+FCE  S LSVLCGGSREEK+ A F+L+  ++   I++ ++  +  S F+V+Y+  P  +  +G+ PE L  +TA     E + N DGR+S   F  W S                G P      T+       F+  +S+V S                VG+G      ST P     D+   +T  +G+A         L      +   R+LL L  + VND+LEI AE A    G L    F +C   +++L G  E   E  EA  +   ++  F+ +D   V F  +A G+S+L  S+ +DKV  AF L D +GDG +  EE+  Y+ S+ KV+Y         I  +P+EL    A QCFK+A L  D+K
Sbjct: 1324 LNEIKQLTNLAQYEPEEVFEIFAGEADEDGLLSRDAFNESFRKVIGGQKSQGARTSDAETQKKLREVIDGLFDLFDRDNSGAVDFGELASGLSVLCGGTKDQKVKAAFSLFDFNGDGFISLEEMTRYLTSVFRVLFQVSPDTQSL-GVTPEELGQVTAQQAFAEADQDHDGQLTLEEFQQWYQQPGGIGEVAKNGEQLFSLAEARRLTNLQSFSPMEVFEALAECADEQGYVSREAFDKCFRKIISTN-QG-IKSEEYQRINTVLNRLFELFDVDKNGLVDFSEISSGLSVFCGGSSEEKIRAAFALYDFNADGFISMEEMTRYLTSVFRVLKEASPSGLQQLG----RES--PEVLGVRTAQQAFAEADLDHDGRLSFPEFRKWYTRSNAANMERLIQNNIPEWLS-----------LREVRRLTNLESFSAQQVLNTFAKFTAADGTMDKETFRQAFDHFKVESAVQESRERLQLLVDRIFELFDKDRNGLVDFNELASGLSVLCGGSQADKVRAAFNLYDVNHDGFISLGEMRLYLTSVFKVLFEVNPDSEARMSVTPEELGEITAEQAFAEADHDRDGKLSFEEFSQWYMQPKRVGDLPVPAVLGEQEQEQQPRKVLQHKPDWVSLDVVKQMTNLEKYSADEVFEIFANRCSENGTLSREAFEECFEQL---VDEQYKNDE---------------VSLERLRLILNRLFVIFDENLDGTVDFCELTSGLSVLCGGSREEKVRAAFSLYDLNQDGFISLDEMVRYLASVFKVLYETGPGTDQTLGVQPEELATITAEQCFLEADLNEDGRLSFDEFVAWYSRSSGFEAPTAGANSILGQPQAPNGNTSESQSDGSFSRDTSKVGSYSGSPAPESPRKTVWGVGKGPHPSGISTAPVCFPSDKIYGITGSNGDALLSPNSASALNMNSSNMEHVRQLLKLGTYEVNDVLEIFAEAA--PSGELTFAAFKKCFDQIIRLAGGHESPEERQEADGMIRRLFRTFDTDDSNTVDFGELASGLSVLSGSSMDDKVRAAFQLYDINGDGYITQEEMISYMTSIFKVMYETTDSTKTKIGVSPEELARVTADQCFKEADLNGDNK 2385
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig12.144.21 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KH67_9PHAE1.210e-28750.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FKQ2_ECTSI8.430e-24545.63EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A2D4BN96_PYTIN2.460e-9428.27Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
W2ZEK2_PHYPR1.610e-8927.40Uncharacterized protein n=1 Tax=Phytophthora paras... [more]
W2ZBH8_PHYPR1.610e-8927.40Uncharacterized protein n=1 Tax=Phytophthora paras... [more]
W2Q9D3_PHYPN1.610e-8927.40Uncharacterized protein n=19 Tax=Phytophthora TaxI... [more]
A0A6G0SMC9_9STRA1.210e-8827.31Uncharacterized protein n=7 Tax=Phytophthora TaxID... [more]
G4YZI8_PHYSP6.640e-8827.21Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
H3GGD8_PHYRM6.700e-8827.31Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
D0N1M0_PHYIT2.760e-8727.50Uncharacterized protein n=1 Tax=Phytophthora infes... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig12contigP-littoralis_Contig12:615682..630970 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog4792.ETI46778
PFAMsEF-hand_1,EF-hand_5,EF-hand_7
Model size3907
Max annot lvl4776|Peronosporales
Hectar predicted targeting categoryother localisation
Exons21
Evalue5.4e-91
EggNOG OGsCOG5126@1|root,KOG0034@2759|Eukaryota,KOG0044@2759|Eukaryota,3QB7C@4776|Peronosporales
DescriptionEF-hand domain pair
Cds size3540
COG categoryT
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789509.9971738-UTR-P-littoralis_Contig12:615681..6157501680789509.9971738-UTR-P-littoralis_Contig12:615681..615750Pylaiella littoralis U1_48UTRP-littoralis_Contig12 615682..615750 +
1680789510.26717-UTR-P-littoralis_Contig12:630672..6309701680789510.26717-UTR-P-littoralis_Contig12:630672..630970Pylaiella littoralis U1_48UTRP-littoralis_Contig12 630673..630970 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789510.0115392-CDS-P-littoralis_Contig12:615750..6158011680789510.0115392-CDS-P-littoralis_Contig12:615750..615801Pylaiella littoralis U1_48CDSP-littoralis_Contig12 615751..615801 +
1680789510.0234444-CDS-P-littoralis_Contig12:622218..6222901680789510.0234444-CDS-P-littoralis_Contig12:622218..622290Pylaiella littoralis U1_48CDSP-littoralis_Contig12 622219..622290 +
1680789510.0316985-CDS-P-littoralis_Contig12:622698..6229651680789510.0316985-CDS-P-littoralis_Contig12:622698..622965Pylaiella littoralis U1_48CDSP-littoralis_Contig12 622699..622965 +
1680789510.040313-CDS-P-littoralis_Contig12:623174..6233201680789510.040313-CDS-P-littoralis_Contig12:623174..623320Pylaiella littoralis U1_48CDSP-littoralis_Contig12 623175..623320 +
1680789510.0491745-CDS-P-littoralis_Contig12:623565..6238241680789510.0491745-CDS-P-littoralis_Contig12:623565..623824Pylaiella littoralis U1_48CDSP-littoralis_Contig12 623566..623824 +
1680789510.0581121-CDS-P-littoralis_Contig12:624634..6247681680789510.0581121-CDS-P-littoralis_Contig12:624634..624768Pylaiella littoralis U1_48CDSP-littoralis_Contig12 624635..624768 +
1680789510.0685189-CDS-P-littoralis_Contig12:625023..6252161680789510.0685189-CDS-P-littoralis_Contig12:625023..625216Pylaiella littoralis U1_48CDSP-littoralis_Contig12 625024..625216 +
1680789510.108599-CDS-P-littoralis_Contig12:625382..6254301680789510.108599-CDS-P-littoralis_Contig12:625382..625430Pylaiella littoralis U1_48CDSP-littoralis_Contig12 625383..625430 +
1680789510.1233454-CDS-P-littoralis_Contig12:625792..6258661680789510.1233454-CDS-P-littoralis_Contig12:625792..625866Pylaiella littoralis U1_48CDSP-littoralis_Contig12 625793..625866 +
1680789510.1340568-CDS-P-littoralis_Contig12:626143..6262701680789510.1340568-CDS-P-littoralis_Contig12:626143..626270Pylaiella littoralis U1_48CDSP-littoralis_Contig12 626144..626270 +
1680789510.143917-CDS-P-littoralis_Contig12:626457..6266301680789510.143917-CDS-P-littoralis_Contig12:626457..626630Pylaiella littoralis U1_48CDSP-littoralis_Contig12 626458..626630 +
1680789510.1521266-CDS-P-littoralis_Contig12:626818..6271641680789510.1521266-CDS-P-littoralis_Contig12:626818..627164Pylaiella littoralis U1_48CDSP-littoralis_Contig12 626819..627164 +
1680789510.1628969-CDS-P-littoralis_Contig12:627273..6273931680789510.1628969-CDS-P-littoralis_Contig12:627273..627393Pylaiella littoralis U1_48CDSP-littoralis_Contig12 627274..627393 +
1680789510.1775918-CDS-P-littoralis_Contig12:627537..6277201680789510.1775918-CDS-P-littoralis_Contig12:627537..627720Pylaiella littoralis U1_48CDSP-littoralis_Contig12 627538..627720 +
1680789510.1900134-CDS-P-littoralis_Contig12:627931..6282551680789510.1900134-CDS-P-littoralis_Contig12:627931..628255Pylaiella littoralis U1_48CDSP-littoralis_Contig12 627932..628255 +
1680789510.200871-CDS-P-littoralis_Contig12:628573..6287291680789510.200871-CDS-P-littoralis_Contig12:628573..628729Pylaiella littoralis U1_48CDSP-littoralis_Contig12 628574..628729 +
1680789510.2114646-CDS-P-littoralis_Contig12:628957..6293321680789510.2114646-CDS-P-littoralis_Contig12:628957..629332Pylaiella littoralis U1_48CDSP-littoralis_Contig12 628958..629332 +
1680789510.2206173-CDS-P-littoralis_Contig12:629503..6297161680789510.2206173-CDS-P-littoralis_Contig12:629503..629716Pylaiella littoralis U1_48CDSP-littoralis_Contig12 629504..629716 +
1680789510.228396-CDS-P-littoralis_Contig12:629886..6300071680789510.228396-CDS-P-littoralis_Contig12:629886..630007Pylaiella littoralis U1_48CDSP-littoralis_Contig12 629887..630007 +
1680789510.2379787-CDS-P-littoralis_Contig12:630305..6303741680789510.2379787-CDS-P-littoralis_Contig12:630305..630374Pylaiella littoralis U1_48CDSP-littoralis_Contig12 630306..630374 +
1680789510.2575858-CDS-P-littoralis_Contig12:630583..6306721680789510.2575858-CDS-P-littoralis_Contig12:630583..630672Pylaiella littoralis U1_48CDSP-littoralis_Contig12 630584..630672 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig12.144.21prot_P-littoralis_Contig12.144.21Pylaiella littoralis U1_48polypeptideP-littoralis_Contig12 615751..630672 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig12.144.21

>prot_P-littoralis_Contig12.144.21 ID=prot_P-littoralis_Contig12.144.21|Name=mRNA_P-littoralis_Contig12.144.21|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1180bp
MECFTVKVQDPQGRVTKDVLLYPGIPGSEVQQVLKAAFSFQVAGLANPLL
DIYFPTTLFSRVPKYFSKRAPYRIVPVCGGGEWREIGEETKIDRGSRIAC
SEDTFGVILQELFLTDTEVQRTEPIVPRSSVDRVTPSNARPLNPGLAELR
RKLGICTFPAEDVLNALRSTAASDGKLTRAEFDVFLKDLASLLESPTLST
SIQIFELFDEAGGGILHVHDLAAGLAVLCDGSVARSVRCACQLYRGAGGD
MGFVEISSFTLSILKVVYAASPANWAWPGMLPRELSAVMSSEFLIQKGLP
LSGRVGFEEWFASTIPEEDERSCDDSYGDAWAHLLQGLQNHDMQVILELL
AAFVDQHGGISSPAFFGCIRALFEVDGRGPLTDAETAKLKVALTRLFIML
DDHRLGTVPFGDLASGISAFCDKHDNETARALFDIHGNEDGSIAEEDMRK
LLVPFFKVMFEVDPHARNLTGTGTRRKSVDPESLAETIAACAFEDATLGP
DGAMSFEGFYRWYSSSFEVPSSSVPVGDSPRSLASSDDALRTALDVGEVH
RIFKLRDINAAGFIYGLSAASCQGRVSWISFLRYMHGFANARPLTEESRS
AVMMARKLFDVYDEDKQREVDLRVLASGLAILCKGSWKDRATALFSVLDT
ERQGSLSREDMRVYFSSTSKLLCSVQPSVLTSTNSSALTEAFGTSPEEGV
NETERFDERMFASLYSDMNNREGCRVTKGTSETLEQARQDTQLYTTPAAH
TFGVLKDALNDQGRLTRPAMHRCLRQLRAMVHNQARHRENEKVKGAKGAV
SEHTYSSAAAENVMNRLFDAVDVGNVGDVNFCEFASALSVLCGGSREEKM
MAIFNLFHRSEGVGITVRDIATFTTSAFRVMYKLQPSLEGEVGITPEVLG
NVTASNMMEEVEPNGDGRISPTNFGWWLSDEGNPNGVRRTTAAGFACHSS
RVDSVGEGSTQPDEDVTQHDGNARAGFRGDQLEGQGHIVMRARKLLCLDC
FSVNDLLEILAEVAIMKQGALAQDDFWRCIGYVLQLGGTAEGTTEWDEAF
LLTECIYHAFEGNDGVVAFAAIACGVSILCQSTAEDKVLVAFLLLDTDGD
GQLVFEEVSMYIASVLKVVYAIGQGVTAIINPDELGAALATQCFKQAKLA
IDDKKFLLEYWQGPERNASLTAVDSHPMV*
back to top

mRNA from alignment at P-littoralis_Contig12:615682..630970+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig12.144.21 ID=mRNA_P-littoralis_Contig12.144.21|Name=mRNA_P-littoralis_Contig12.144.21|organism=Pylaiella littoralis U1_48|type=mRNA|length=15289bp|location=Sequence derived from alignment at P-littoralis_Contig12:615682..630970+ (Pylaiella littoralis U1_48)
AACACAGCTCTGCTGTGTCTGCTGTGTTCGAGTGCGCCGATCAGTAGAAG
TAACCTCCGCAAAAGAAGCATGGAATGCTTTACAGTGAAAGTACAAGACC
CGCAAGGGCGAGTCACCAAGGTATGCGGTGGTGAAAGTATTTTGCGCAAC
CAGAAGAACTAGTGCGGTATGCAAACCACATTTCCGGCTAGAGCAGTATC
GAGATCTTCTGCGGTTGTTGCGAACTTCATGCAAGAAAAAGATGCAAATG
GTGAAACACTTACTGCTGCATGGTTCGCGGGTGCTCCCCGCCTTCACCTC
TGCCCAACCGATAATGAGTTCGCTAAGAGCGCTCTAGTAGCTGGTCACAT
CTCAGCTCTCCCACCCAGATAGTGCGAAACTAGCATGTGTGCACGCTGCG
ATCTTGTACTTGTATGCGCACATGAAATCAGCCATATCATACGAAATATT
GTGCATCGATGTTCAACAGCACTTGTGTCCGCTTGGCCGCATGGATTGGA
CCCGACGGACCAAAACATCAAAACATGGATGGATGGAAGCATGCTGTTTG
TGACATACGTGCTGCTGAACTTATTTGCTTGTAGAATGTGAGGTAGACGA
TTACTTGTGAGAAGTGTGATTCCGATACCCAAACACACTCACAACTGCTG
TACCAGGAAGATCCTCTGAAGAGTGAGCGTGTCCCGTCAAGGATGAGTCT
ATTTCCGAAATTTTGAAATTTTAATTTTTGAACTTTTGTGTTGTTGTCGT
ATCATGCTGGTGTGCAGTGCCTGGTATCACATAATCTTATTAGCTTCGTT
CCTGCCGGTTCGACCTTGCTGGTCTCTCGTGCGTCTAGAGCCCCAAAATC
GGCACGAGGGCAGCGCCGTTCAGTTATTTTTATTTTTCTTCGCTCATGGC
GAGGCCTCAATCTGTGCCTGCCGCTGTCCCGCCCGAGTTTCGCGCTCTGG
CGTGCCGTGAGTCTCGAGCTGCGGCATCGACACCGCCGCCCCAAGGCAGT
GGCTGCGGCGCATTTTCTCTCCCCGAGGCCGCTGTCTTGCGGCATCCTGC
TGACGATCGTCGCTTTGGCCAATCACCGGTCAATATATTGCTTTAAATCT
GCAGTCCCCGGCTACATTTGTCCAATCACCGGTCGATTTGTTTGTTTTGA
CGTTTTGACCCACAGCTGTAGTCCCCGTCTGTTTACCGTCATCAGCCCAC
CACGAAGAGTTCCAGAAGGGAATATCAAACGACGGCAAAAATCGGGTCCA
CTTCTTTGCTGTGCTGCTGCACGTTGGGCAAAACTTATGTAGGCGCCAAA
GCACCTGTCAATACCCTCTGCAAGTCGCAGAGCATGATGACTACTGCATA
TGAAAGTTCGGCTGCTGCACCAAGCAACGACGCCATATCACAGCAGCAGC
CGCAGGAGCAGCAGCAGCAAGTAGGATCAAGAAGGACAGCAGCAGCACTG
CTGCATGTTTTGCGGCGAGTACACACAGAAGTATCTCTGGGGGCAGCTCG
TTGTTTTACACTCTGCCAGCTACACACTTTAATCGTTGCCGACCTGCGGA
TAGCAGTAATGCTGGGTGCGACTTGGTTTGGTAAAATCAGGCAGAGACTG
AGAAGAAAGTGGGCACTGCTGTGTACAGCAGCAGCAGCAGCATAGTGTCA
TGTCGGTAGAAGATGTATCGGGTGTGTGTGTACTGCTGCTGCTGTTATAT
TTGTAGTTGTATGTGGTGTGTATCGTGTGTGTATTTTCACTGTTTTTGCT
CCCAGAGCGCGTTTCTCCAGAAGCAGTACGCTGGACATTTGGAGGTTTCC
ATCACAGCGGCAGCGGCTGCCGATCTTACATGATAGATAGAGCTGACGAG
CTGTATCTTTGCGACTTGAGTCCACCCAACAGAGGCAAGGGTTGAGGGGC
TACATGTGTGGCGAACAGTGCTGCTGTGTGCGAAGATAGACGAATCGAAA
AAAAAGTGGAGAGATATTGACTGCTACTGACTGTGGAACAGAGCAGGAAT
CAAAGTACCTGAAAATAAAAAAGAGGGCACCAATGCAACGGCCGGTTGGA
TACTACCGAGCACGTAGCGGCATACTGTTTGGGGGGGGGAATGCACCTTG
TGAACACATCATAAAAATTGCTCGCTCAATCCATCTCAGACCACTCACTT
CCAGTGAACAGCCGGGGACTGACTGTAGGTAAAAGCAATGAATCGACCGG
TGATCGGCCAAAACAATCGACGATCGCCAGCAGGATGTGGCAAAACAGCT
ACGACGGGGGGCGTCAACACGCGTTTCAACCACTGCTTTGCGGCGGTAAC
CTGTAGGAGGGTTATTTGTAATCGCACGCGCTTTTTGTCGCTACTCAGTG
CCTGGTTTTTTATTATTTCTTTTTTTCTCCCCATGTTGCAAGAATCTCTT
GACGGAATGAAAAAACACATCATCCGGTTGCGATTGCCTGCTGTCTCTGT
GACGGCGCGAAAGCTGGTCCGTCCATCAGTTCAAGTAGAAGTAAACTGCT
GTCGTAGTAGGGTACAATCTGTGTTCTGCGTTGTAGAAATGTTTCTTTCA
TCCATCCCTTACATTGCTGCCAAAATATCCACAACTTTTATACTACATTC
TGCAGGTAGTTGTGCGACTCCCGCAGTCAAATCTGCTCGTTTACGCAGAA
TTTAGTTGTTGGGACATTTGCGTATGTGCTTGAGATAGTCCAGGGTTCTC
CTGCAGTCCATTATAATTACTTCACTTTCTTCCTATTTTTGGTTTGCCGG
TTGCGGTCGGGTGTTCAGCTGTATGCCCTTTCTGTGATATACTTTTCTGT
GTTCAGGTTGCAACGTAAGTAGTAGGTTTGGGCCGAGTCTTCAGCTCCAT
GCCCTTTCTACGGTATGCGCCCTCGTTTTTGTATCTCCTTCTCGTGGCTT
GCATTCCCTTTACGATTCAGATTGTGCCTTCTCCCAGTGTTTAGAAGTGA
TACTTCGTATATCCACAGCTATTAGCTGTGGGCTTGCGGCAATACGATTG
ATGGACGTTTTCAGCGTCCTTAATATTTCTATATCCGTTCAAGGCACTGG
GTGCCGTGTCTCACGTCTTGCAAGAAGTAGGTGTCATCGGTTCGACGAAT
CTACTCGCGATTCGTTAAAAATACTTATTTACACGTGCAGTATTTCTTTT
TTTTTGTTTCTCTTTTCTGACTACCAGGTATGTGTTCTGAGATAATTCCA
TATTATGTTGCTTTTTCCCTTCTGCCCGTTTGTCACCAACGTTTTCTTCA
CATGGAACAGTCAAATACAGAATCTGGTCGCGATTTGATTGCCAGCAATC
TCTTAGTGTGGCGCGATATCTGGTCCGTGCTGTTCGCATGAGACGTGTAT
CTCTTTGCGTTCTGCCTTGAGAAAATGTTGGTTTTGTTTTGTCTTCCTTA
CTGCCAGCATTTCCAAAGTAAAATCTGCAGTCTGTTTTATTTTGCTATTG
CCTTACCCATTCGACCTTCGGCGACGCGAACATATCAGTATTTTACAACC
TTACGTCAGGTTACTAATATACCTAACGTAGAATTGTCCCCTTTCTTACA
CCTCAACCCCTTGGCATGATTCAAAGCCAACCCTTTCATATTTCGACGCC
ATACCATCGCCTCCATGCATCCGTACACATCGCCTACGACGGGCCGGCGC
CCTCTCGGGCGCCAGCGCAGCCCCTTTTACTTCAAGTTTCATGCAAGTTA
GACTTTTGAAAAAACGACAAAAGTAAAAGCGGAATAATAGTGCTGCATGA
AGTGTCGTGATATCATACAGGTATCCTTTGAGAATGCCCCCTTGGGGCGA
TCTTTTTGTTGGCGAAAAAGAAGATCCCGGCGTGTTCTCCAAGGTAAAGG
GGCGACCCCGTGAAATTAGGGATCTGCCTTCGACAAACGATCAGGGAGAA
GTGTACCCTTTGTGAAGGTCACGTCAAAAACACCCCCCCTTCTAAGACTT
TTGCTCATGTGTTCATGACAAAAAGTCGTCAAGGGTACCCGGAACGGCTG
GCGACGAATCATTCCATTTCTCTTAGGCATCTTTCGCGCGTTTTAAAGGG
GGCATCTTCGACGGACCTTTGTGGAAGTGTTTATTCTTTGCAAAGGTCAC
CTCCCCACGACCTTTAAAAAAAGCAATAGCCCTGGAGCGAAAAGTCACCC
GGGGGCGTTTTCTCTCTTCTTTTTTGCGCATTTCGTTACCAGCAGTGTGG
AGGTGGTGCTCGATATGAAGCTGATGATGTGTTTGTGTATTGTCACCGAT
TCTTTTCTGGACGCCAATGGACTACTTTCGGTAAACGTTGGGCGCACCAG
CCGGGGTTGTACAGAAGGAAGATAACGCAGGCAGGACTTTTTCTTCTCAT
TTTTTCGTGTTTTCATGTTCTCCACCTTCCATCTGCGATGCTTGCCCGAC
TTGTTGTCGCAAGATGTCCGATCATTTCCTCTCCTCGTCGACCTCTTTAG
AGGTTGATTTTGTTTTATGTATGGCATTTGCAATATACTCGCTTTTCACT
TCTACATACTGATTGTGTGAGACAAATCCAGTTCGCCGAGATCCGAATTC
AAGACCTACATAATGTAGCTGTCAGAAGGTTTCGAGTTTATCCTCTGAAC
CACCGCGGCGACCGGTGGAAAGGATTTCATTGCGAAAAGCCATAAACAAT
TCCACACCACAGCCACCAACACCAATAGCAACAACAATGACAACGACAAC
GACAACGTTACCACAATGGATGTCGTGGACTTTTCTGCGAATGTCCCGTG
TGGCGCCCAAAACAAAAATCGAAAAAAAAAAGAACACCCGTGTCGAACTT
GAAGAAGAGGGGCAAAGAAAAATGAAAACCCCGCGGCGTTCTCAAGATTT
GTGCTCAGTCGGCGGTATTGGGGGCGGAGGGGGGGTAGGCGTTCTCGTGG
TTCGGGGCGCTCCCACAAAAACTGCGGCATTCATGACGGCGAAAGCTGGT
GGCGTCGGTAGCTGTGCAGTTTTGTTGCCGAGAAAAAATGCAACAGTTTG
GTCCACAATCACCCAAGGTAAAGCTCACCTGCCCTTACCAGGCCGCCAGC
AGTTTCGCCCTGCTCATATTTGCACCATGAATACCACAACAGCCGTGAAT
CCGCAACTCTCAAGATTTTCGAGGGAAATCGTCGAGGACTTGTCGATAAA
CAATGCAGTAATTTACCGCATTTGCATGCCACACCATTGCTCAGTTGCCT
AAACGTCGCAACTTTAACTTCTGACAGCTAGGTCCTAAGCTCGACTTTCG
GTGAACCGTTTTTTTTCTCACGTCACATTCAGTAGTGGAGAGCGATTTTT
TCGTGAATAGACAAAACTCAATGCTAGAGTCGACGAGGGAAAGGGACGGG
CCCACCTGTTTCGCGATAAAAATGAAGAAGGCGAGCATCGCGAAAGGAAG
GCGGAGAAAAAAAATCCTGTGTTGACCTTTTTCTTGTGTGACTCCGGCGG
ATGCGCCCACGTAGGAGCACAGTACGAGCATATGTATACCGGAAGGTGGA
GACAGGTGTCTAGAATAATAGGAATGGCATCCCCCACACTCTGTTTGAGC
TTTGTTGGTGATATTCACTTCTCTTTGCCCGCGTCCTCTACATGGTTAAC
GTTGACCTTCATGCGCATGTGACTTCAGAAGCCTCGACAGAAATGGACAC
TCGTGTCCCAGGCGATTTCTAGAAGTATGCTGCTTCGAAATCCCTTCACG
AACTTGTAGGTGGTCGTGATGAAACAGCGCCCGAACATGCATACAATGTT
GATATTTACTTATTATGCGGCCGTTGCCCCCCGACAACATTTAGACCAGA
GGCCGGGAGAGAAAGCCTAGGGTTGATCCCCAACCCGGCGTATTGCTATA
TGGCAGTTTTGGAGTTGGATCATAAGGGTATGTTGGCGCCCAGCATGCCA
TACACCACATGCTATCGTTTCAATCGATTTGTCGTCACGGTGCTCTCCGG
CGGGCTGCAGCGTGTGCAGCTCCCGAATAGATATGTCATGCACAATTACT
TCTATTGGGGTTCCGGGCGAAGGCCTCGATGTGTTCTAGGAGTTTCTTGG
GTCTTGCGGAAGAGTATCATCACTGTGAACATGTCGCATTCCTTGTAGGA
ATCACAAAGGGGGTCGAATGTTGTGTTCTCCCATATTTACCATTGTTATC
AGGCCGTTGAAATTCGCCTAAAGGGTTATCAGGCGAGACTCTTCGTCTGC
GCGAACTTTAAAAATATCCCTCAGGGAAGAACATCAATACATCGTTGGAC
TCGAGCGAGTAAATCAGACACATTACCTCCGGAGAAGCTGTGAAGCTGGC
GCGTTCGACAACTGATGTGATTTGTAATAAGATCTGTTTTTTGTCCCCCA
ACAGAGTGTACTGGCAATGGTGCTGATAGTTGGAGGGTTATAACATGATC
CATAACCGGTGGTAATTTCCTACAAGCGCACTCACTGTGAATAAGGTGCG
TCATTTACAATTACGTCCGATTGGGAACTATTCCGAATAACCAATACCGA
TTCTGCGAAACGAACACGCACCAATCCTGTTGCGCAGGATGTACTTTTGT
ATCCAGGGATACCCGGGAGCGAGGTTCAACAGGTTCTAAAAGCTGCATTT
TCATTCCAGGTGAATAAACCAAAAAAAGGAGAAAGGTTCTCAGCAGATTA
CAACAAGAATGCGGTGGGTTGTGAGTTATGACCGTCAATATTGAAAGCAC
GAGGAGCGCACGGAATTCCGCAGGAAAGACAACAACAGACTTCGAAGGAT
TACAAATTTGGCACTTCGTGTTGGAGCGGTTGAAAGGAGCGAAAGTGGTC
GTAGATAACGCCGTCGATGACGTCGTGCCTGATGTCCGGGTGTTCAAACC
GTGGGTTTTGTTTCTCATGGGCTCTACCCTTCTCGCTCTGTGGTGACTTT
CTGCCGTTTTGAATTTAGAGCGCATGCGGTACGATTCGTATGCACTCACA
GTACATACACGGGCTGCAACGCCATGCTCTTTGCCGACTTTGCTACGGCG
TGCTGCGTGCAATCAAGGTGGCGGGACTCGCAAATCCGTTGCTGGACATA
TATTTCCCTACCACGCTTTTCTCCAGAGTGCCCAAGTACTTTTCGAAAAG
GGCCCCATACCGCATTGTGCCCGTGTGTGGAGGTGGGGAGTGGCGAGAAA
TTGGAGAAGAGACGAAAATCGACAGGGGATCGAGGATCGCATGCTCCGAG
GATACCTTCGGGGTAATTTTGCAGGAACTGTTTTTGACGGATACAGAAGT
TCAGCGAACGGAGCCTATTGTGCCCCGCAGCTCGGTGAGTCCAGGTCGCC
CTTTCATTTCAGTGGAATGGTTCAGGCGTTCTCTGAGCGATGTTGGAAGT
GCACCACAGGCAGCGCCGTTGATGAAGCGAGCCAAAGCCACCACCTTTGA
ATAGGGCGAGGTCGTATGCCATTACATCGGTATCGCTGCTGCAGGCATGA
GTTTGACAATTTGTTTTCCTGTTGCTCAAAACTTGGAGAGAAGGTGGATC
GAGTTACCCCAAGCAACGCTAGGCCTTTGAACCCTGGCTTGGCGGAGCTT
CGACGAAAACTGGGGATTTGCACTTTTCCAGCGGAGGACGTCTTGAATGC
ACTCCGCTCCACGGCGGCAAGTGACGGGAAATTAACCAGGTCAGTAAGAC
CATTGATGAGGTCAATTGAACCATATAGTACGCCTGAAAACCCGTTTGAT
TCTCTCGCCTGCAGTGGCCCAATGGCAAATATCATTTGTGGTCGACTGCT
GTTTGTTCCCTTGTGTTGTACCAATGACGGAACAGCGTTGCTTCGTATTC
GTACCACGGAATTGAACCAAGCTGGAGATATTGTCGCGAAAGCAGTGCTG
CTGACTTGTAATTATTCTTGCCGAACGTTCTCAGGGCCGAGTTCGATGTC
TTTTTGAAAGATTTGGCGAGCTTGCTGGAGAGTCCGACCCTGTCAACATC
TATCCAGATATTCGAGTTGTTCGACGAAGCAGGGGGGGGGATTCTTCACG
TTCACGATCTGGCTGCAGGGCTGGCAGTGTTGTGCGATGGGAGCGTAGCA
CGGTCTGTCCGATGCGCGTGCCAACTGTACAGAGGAGCTGGCGGTGACAT
GGGATTTGTTGAAATTTCTAGTTTCACCCTTTCTATTTTGAAGGTACGTT
TGAGGCCCAATTATTACTTCGGTGGCTGTTGTCGGACAGACAGCAGGGCA
GCGCGATCGGTGCATCACAACTTGTGTGAGTCGCGTAAACCCGAAGATGG
ACTTGCTGTCGACGTTTCCTGCGAGTGTCATGCAACGAAGCAAGCAAGGA
GCCCAAAGATGTATCTGTACTTTCAGTTCGCGGCACATGCATGACTCGTT
TCGTCCCCCTCAGACTGGACTTCGGGAGACAAAGGGAATTTGTGGCACAC
AGTTTTCTGATTGGTTAAAATATCTTCGGTCGGAAATTAAAAATTAAAAA
ACATTTCACTGGAAATAAGTCCGGGCAAGCATCACATGTAGAAACTGTTT
GTTTCGACCAATCAGAAAACTGCTCACCAATTCGTCCGTATTCAATTACT
CTGTCTTTGGAGCCCGCCACAAAGAGTTCCAAATTTTTCTTCAGGATTTA
TATTTTCTGCACAATTGTTCAAAACATCCAGTATTATTCACTAGGAGTAG
TCAGAAAATAAACTTTGTGCCAGTTGGTCTACATCTCTCTACCGAGTATC
GATGGAAGTGGCCGCCACAAATCAAGGAGTCTCCAGGAATGATTTCCTAA
CCGAAAAAATTCCTCACGATGACCGGCCGCGGTCGGTGATTCAAAGTCAC
CCTTCAAGTGACACCATTCATATCTAAAAGTCCTTCCTGAACGGCGGTGG
GTTACATCACCCGCCGTCTAAGGACCTTCTGTCGGCCCGGTTTTGTTTTT
CGACCTGAAGCTTTTTGACCAATCAGAAAATGCGTTCCACAATTTCTATC
TAGGTTGTCTATGCCGCTTCCCCCGCGAACTGGGCTTGGCCAGGGATGTT
ACCGCGTGAGCTGTCCGCCGTTATGTCGTCGGAGTTCTTGATACAAAAGG
GGCTGCCGTTAAGTGGACGCGTGGGTTTCGAGGAGTGGTGAGACCAACTC
TCGTCATTTTCATCATTTTGACACTGGTTCGATAATTCGAGCCCATCGAA
ACCTCTTGCAGCGAATTGTGTGAGAATCCCGGACTCTGGTCGTGTTCCAC
ACAGTATTCATTTGTAGAAGATAGAAGGTGGAGTCCTGTGTACCTGCCGA
TGCTAAACTGGAGCGAAATATGCGAGACTGCAAATATCTCGGAGCGAGGT
ATAACAACATCTTGACACACATACCATCATTCACACCCACAGGTTTGCTT
CTACCATCCCGGAGGAAGACGAGAGGAGCTGTGACGATTCGTATGGGGAT
GCTTGGGCGCACTTGCTTCAAGGTCTTCAAAATCATGACATGCAAGTCAT
CCTAGAGCTGTTGGCAGCGTTCGTTGACCAACATGGCGGCATTTCTTCAC
CTGCATTCTTCGGGTGTATACGAGCGTTGTTCGAGGCGAGTTTGATTTTC
TTATGCATGAGAGGTGTGAAGAGAATCTCAGATTGCACACCTGCTCGATA
CCAACCATCAGTGGCATGCAGTACACACTCAGCCAATGTGGGATACTGAT
CACGAATCTGGGTTGCCGCGATGGGTGTCGTTGACTATCTCATGTGTTCA
GGTCGACGGACGCGGCCCTCTGACCGATGCGGAGACAGCGAAACTCAAGG
TCGGAAGGATGGGTGTTACCTTCGGTCTCTTTCATCTGTCTCTTTCATCT
ACGGCCAACGTGGTCGATGTTGTGGCTTCGTCAAGTTTCCTTTCGCAACA
GCCGCAAAATTTATCTGCTCAAGAACCCAGTACTTGCCCGGTCTTTCGCA
CATATAGTGTTCTTGTATCTCTTGACTCACAGTGCTTAGTCGGTTTTTCA
CACGATACGAAGTGAAATATTGCTTGTAGTGGATGTCGCCGAAAATGTAT
CAAATAGATCAACCAGCTACCATCGTTACCAGAGGTTGGGAAGCAAGCGC
CTACAAATCACGAATGTTGTCTGTTGTACACGCCCCATGTCTCGCGTGTT
GTTCTTAACAGGTAGCATTGACGCGACTGTTCATTATGTTGGACGACCAT
CGACTCGGGACTGTGCCATTCGGGGATCTGGCTAGGTGAGCCTGGTTCAT
CAATCCTTCGATCACGTGTAAGAGAAGTATGGATAGTCCGCTCGGGTACC
ACACTTGCTCGTTGTGGTGCGCTCGATTGCCGTGAGGGAGCTTATTGTCA
ATGCTTTGGGCCTGCGTTCTGCTCTGTGCGTTGTGTGTTACAATGTTTTC
ATCCGAATTCGGGAACATGACACGACCCCGTGGGACTAGTCGTGGATGGC
TGATAAGTGAAATGAAAGGAAGTTCTCGGCTTAACCCCCTTTATGCGCGC
ATCGGCAAGCAGCGGCATCAGCGCGTTCTGCGATAAACATGACAACGAAA
CGGCAAGGGCGTTGTTCGATATTCATGGAAACGAGGATGGTTCCATTGCG
GAGGAGGACATGCGGAAGCTTCTGGTGCCTTTTTTCAAGGTGAGAACATT
GAAATAAGTCATCCGTGAGGGCTGGCCAAAAGTAACTCACACTCCGACAC
CTGAAGCATATTTCCGCCTTTCTGTGTTTCAATGTTCATTGAAACGCGAA
AGCGGTCCCTCCCTCTCCTATTTATCGAAAGAACATGTACGGCATTTTTT
CCCTTGCTCGATCGGTAACGTTGCAGGTAATGTTTGAGGTGGATCCACAT
GCACGGAATCTTACTGGAACAGGCACAAGGAGGAAGTCTGTGGACCCGGA
AAGTTTGGCGGAAACAATCGCTGCCTGTGCGTTTGAAGATGCGACTTTGG
GGCCAGATGGGGCAATGAGCTTCGAAGGATTTTATCGCTGGTACTCCAGG
TAGAGCGAAAACTTCATCAAAAATGTCGTTCGAGGCCTTTGCGCAGACCA
ACAACCAGGTTATTGATACAGGAAACTATATTTTTGATATGACCAAGCGA
TGCATATGGTCTATCTTACCCTCCTGTAAAGGTAGGTATTGAACACTCAT
GTGCTCAAATTGCAACATTTGTCGTCCGTGCGAGCAGCTCTTTCGAGGTA
CCGTCGTCATCAGTACCGGTAGGAGACAGCCCTAGGTCTTTAGCCTCGTC
AGATGATGCACTGCGCACCGCATTGGACGTGGGGGAAGTACACCGCATAT
TCAAGCTCCGTGACATCAACGCGGCGGGGTTTATTTATGGTCTGAGTGCA
GCTTCGTGCCAAGGACGAGTCTCGTGGATATCTTTCCTCCGGTACATGCA
TGGCTTCGCAAACGCCAGACCGCTGACAGAAGAATCGCGTTCAGCAGTAA
TGATGGCTAGGAAACTCTTCGACGTTTATGACGAAGACAAGCAACGGGAA
GTGGACCTGCGCGTGCTGGCAAGCGGTCTCGCGGTAAGAGTAGCTGCTTG
ATTCTGACGATACACTGATGAACAATCCGCTTTGCTCTATTTCGTGTGCT
GAATATTTGAGGCATGCCTTTCCCGTGCCCTCTGACGCTCAGATATTGTG
CAAGGGGTCCTGGAAGGATCGAGCCACGGCGTTGTTTAGCGTACTTGACA
CAGAGAGGCAAGGATCCCTTTCCCGTGAAGACATGCGCGTGTACTTCTCT
TCCACTTCGAAGGTGCGGCAGAATATTGACGATTCGATACAATTCATTCA
GCCTCAATACCTTTGCGGTTTGACATTTGTTTTTCGTCCATGCCAAACCA
GATTATAAATGCGCTGACCTCCTTTCCCCTTTGTTGTCTGACGTTGAATG
GGGCAGCTTCTGTGCAGCGTACAACCTAGTGTGCTGACTTCGACAAACTC
GAGCGCCCTGACCGAGGCGTTTGGGACGAGCCCAGAAGAGGGGGTCAATG
AAACGGAACGTTTTGATGAGCGTATGTTCGCCAGCCTTTACTCCGACATG
AACAACAGGGAGGGATGTCGAGTGACCAAGGGAACGTCGGTGGGTTTGCG
ATCCCCTGAATAGCTGAATAGGGTATTGCCAACTTTTGCCGTTCGCAAGT
ACCTAGCTGATTCGTGCTTGCGCTATATTTTGCCCTCATCGATATGTTCT
ACGCGTGGTTTGGCGTTTGAAGATGTTTCAGTATGCTGAGAGTCTCGTCG
TCGGTTGTGACCCGCCATCCTGTTGCTTGTTGCGTGGCTTTCTCCAACAG
GAAACGTTAGAGCAAGCACGGCAAGATACTCAACTTTACACCACTCCGGC
GGCGCATACATTCGGGGTTTTGAAGGACGCATTGAACGACCAAGGGCGCT
TAACTAGGCCGGCAATGCACCGATGCCTTCGCCAACTACGTGCGATGGTG
CACAATCAAGCTCGACATCGGGAGAATGAGAAGGTGAAGGGGGCCAAAGG
AGCTGTCAGTGAACATACCTACAGCTCAGCTGCAGCGGAGAACGTGATGA
ACCGGCTATTCGATGCCGTTGATGTGGGCAATGTGGGGGATGTGAACTTC
TGCGAATTTGCAAGCGCTTTATCGGTAAGCTGGCGTCATTGCGTGAATAT
GCATTGATGTAGAGGATAAATGCATCGTTCTTGAATCATTTTCAGTGATG
CGGGAAGTTCGCACGTGTGATTGCGTTTTTGCAGAATGCTCACGATCGCT
ACAAGTTCAGCGTCCGCATGCCGTTTATGAGCTTCCACGAGGGAAGGGTT
TCACGATGTCCGCCTTCTTGATGGTGCTGCTCAAGTGCCTTCGATGCATG
TAACTTGGATGCATTTGGGTGACCATAGAAGCGGATGTCGACGCTGCGCC
ACCACACCTTTTATCAGCTTTGGGTCACTTCTGTACGGGCAGGTGCTGTG
CGGGGGTTCACGGGAGGAGAAGATGATGGCGATTTTCAATCTATTCCACC
GCAGCGAAGGTGTAGGGATAACCGTTCGTGATATAGCAACTTTTACCACG
TCCGCGTTTCGAGTCATGTACAAGCTTCAGCCCAGCCTCGAGGGAGAGGT
GTGATTTGTTGTTGACGGGATATCAGTTTTGACATTACCCCAGGGGTACC
CGTAGGGAGTGTGGTGTATAAGTGTGCTAATTTTCTGCACTCTGTAGCGT
AGTGTTCGATGGTGTGTCCCGGCACACCCGTTATATTGTTTTGAATGTCT
GCAGCATTTTATCGGCAGAAGTAACCTGTCGAACTCTACTGCGATACCAT
ACTCTCCGCTATCGCGCCCCGAGTAGGTCGGTATAACGCCTGAGGTGCTG
GGAAATGTGACGGCTTCGAACATGATGGAAGAAGTGGAACCCAACGGCGA
CGGTCGAATATCTCCAACGAACTTCGGATGGTGGTTATCCGATGAAGGCA
ATCCGAACGGTGTCAGACGTACAACTGCAGCAGGCTTCGCTTGCCACTCG
TCACGTGTCGATTCGGTTGGTGAAGGTAGTACACAGCCAGATGAGGATGT
TACGCAGCATGATGGAAACGCACGTGCAGGATTTCGGGGAGACCAGCTCG
AGGGACAAGGCCATATTGTGATGCGCGCGAGAAAATTACTCTGCCTGGAC
TGCTTCAGCGTGAATGACTTGTTGGAAATTTTGGCGGAAGTTGCAATAAT
GGTGAGTCTTAAAGGCACCGCTCTCGCACTTCATGGTCGAGGTCGTGAGT
GTCCATCCGTCGTACCAGCCGCACATCGACGAAACACACATCTGGTATGA
GATTCGTGGCTGTTTATTTTCAATCAACTCCTTCGTATATAACAGCTCAA
AACCTTTTCTATTTACCTCTAGAAACAGGGCGCTCTAGCTCAGGATGACT
TCTGGCGCTGTATTGGCTACGTCTTGCAGCTGGGAGGGACTGCAGAGGGC
ACGACTGAATGGGACGAGGCTTTCTTGCTGACGGAGTGCATTTACCACGC
CTTTGAAGGCAACGACGGGGTTGTGGCCTTTGCAGCCATAGCGTGCGGTG
TCTCAATTCTATGCCAATCGACGGCCGAAGACAAGGTGCAAGTTCTGGAA
GTGCGATGTACCGGTACTCCCTTCCTGCAGGAGTACAAGTAGTCTTATTA
TAGCTCATTTGTCTACAGTCGTGGATTCGTTCTTGGTTGTACTTCCTCGG
TCGCATGTAGATTGCTCAGCGCCCCCCCCTCCCCTCCATGTCTATCCATC
TGCAGGTCCTGGTGGCATTTCTGTTGCTCGACACGGACGGAGACGGGCAG
TTGGTCTTCGAGGAAGTCTCGATGTATATTGCCAGTGTGTTGAAAGTGGT
CTATGCCATCGGCCAGGGGGTCACAGGTGACCGTTGTTTCAGAATCACAT
GGTATTCTAGTTTGGATACACGATGATCACCAGCTACGCTTTGCTAGGAC
TCATTTCTGTTGAGTACTTTTGACTTATTGCGGTATTGTCACTCTATATG
TGTGTCGACCCAGCAGCACCAGCAGCAGCACAAGCGCCACCCCCTTTTCC
ATGTCTGTGCCGTACTCATACAATTTCGACCAAATTGCATCGCGCAGCGT
CCGTGCTCCTTTGTCGTGTGTGGATTTTGCTAACAAAGGAGTACTCATAT
TGCTGAACGCCCTCGTGCATCCAGCTATCATCAATCCAGACGAGCTTGGA
GCTGCGCTTGCTACTCAGTGCTTCAAACAAGCAAAGCTTGCTATCGATGC
AAAACTGGGGATTGACGGTGAGTGAATTGCCCGAGCAAAACAACCTGTGT
CCGTAAAGGCCTTCAACTAACTGCGAAATCGACTTCCTCTCACTTGTTTA
CGCCCCCCCCCGGTAATATACACTTGATATGGTTTACTCTGATTCCGGTG
CCCCCATTTACTCAATTTCTTTTACGCCTGTCACAGATTTCCGGCTCTTC
ACTCGATGACAAGAAATTCTTGTTGGAATATTGGCAGGGTCCCGAACGGA
ATGCGTCTTTGACAGCAGTGGATTCACACCCCATGGTGTAGGTAACAGCT
GATCTGAAAGCAGGAGCTCAGGGTCAGTTGGTTTGTTTCCTGGCACCGGG
TGATGGCGGTGATTAGAATTCTTCGGAGAAGTAATTTAAGCGGGTGATCT
ACATGTCACCAGTTCTAGCCATTGTGGTGTTATTGACAGAGTGGAGATGT
TCGCGAGACTGGCCTCTTTTTCGAGTACGGAGGCTACTAGCTTTTTCACA
ATAACCAACCTGGTAATCCGTCTTTCTTTGTGACAACTAGTGTCATGTCC
AATCAGCTACATGGTTTTCGCAGTCATTGCATCGTTGCG
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig12:615682..630970+

>mRNA_P-littoralis_Contig12.144.21 ID=mRNA_P-littoralis_Contig12.144.21|Name=mRNA_P-littoralis_Contig12.144.21|organism=Pylaiella littoralis U1_48|type=CDS|length=3540bp|location=Sequence derived from alignment at P-littoralis_Contig12:615682..630970+ (Pylaiella littoralis U1_48)
ATGGAATGCTTTACAGTGAAAGTACAAGACCCGCAAGGGCGAGTCACCAA
GGATGTACTTTTGTATCCAGGGATACCCGGGAGCGAGGTTCAACAGGTTC
TAAAAGCTGCATTTTCATTCCAGGTGGCGGGACTCGCAAATCCGTTGCTG
GACATATATTTCCCTACCACGCTTTTCTCCAGAGTGCCCAAGTACTTTTC
GAAAAGGGCCCCATACCGCATTGTGCCCGTGTGTGGAGGTGGGGAGTGGC
GAGAAATTGGAGAAGAGACGAAAATCGACAGGGGATCGAGGATCGCATGC
TCCGAGGATACCTTCGGGGTAATTTTGCAGGAACTGTTTTTGACGGATAC
AGAAGTTCAGCGAACGGAGCCTATTGTGCCCCGCAGCTCGGTGGATCGAG
TTACCCCAAGCAACGCTAGGCCTTTGAACCCTGGCTTGGCGGAGCTTCGA
CGAAAACTGGGGATTTGCACTTTTCCAGCGGAGGACGTCTTGAATGCACT
CCGCTCCACGGCGGCAAGTGACGGGAAATTAACCAGGGCCGAGTTCGATG
TCTTTTTGAAAGATTTGGCGAGCTTGCTGGAGAGTCCGACCCTGTCAACA
TCTATCCAGATATTCGAGTTGTTCGACGAAGCAGGGGGGGGGATTCTTCA
CGTTCACGATCTGGCTGCAGGGCTGGCAGTGTTGTGCGATGGGAGCGTAG
CACGGTCTGTCCGATGCGCGTGCCAACTGTACAGAGGAGCTGGCGGTGAC
ATGGGATTTGTTGAAATTTCTAGTTTCACCCTTTCTATTTTGAAGGTTGT
CTATGCCGCTTCCCCCGCGAACTGGGCTTGGCCAGGGATGTTACCGCGTG
AGCTGTCCGCCGTTATGTCGTCGGAGTTCTTGATACAAAAGGGGCTGCCG
TTAAGTGGACGCGTGGGTTTCGAGGAGTGGTTTGCTTCTACCATCCCGGA
GGAAGACGAGAGGAGCTGTGACGATTCGTATGGGGATGCTTGGGCGCACT
TGCTTCAAGGTCTTCAAAATCATGACATGCAAGTCATCCTAGAGCTGTTG
GCAGCGTTCGTTGACCAACATGGCGGCATTTCTTCACCTGCATTCTTCGG
GTGTATACGAGCGTTGTTCGAGGTCGACGGACGCGGCCCTCTGACCGATG
CGGAGACAGCGAAACTCAAGGTAGCATTGACGCGACTGTTCATTATGTTG
GACGACCATCGACTCGGGACTGTGCCATTCGGGGATCTGGCTAGCGGCAT
CAGCGCGTTCTGCGATAAACATGACAACGAAACGGCAAGGGCGTTGTTCG
ATATTCATGGAAACGAGGATGGTTCCATTGCGGAGGAGGACATGCGGAAG
CTTCTGGTGCCTTTTTTCAAGGTAATGTTTGAGGTGGATCCACATGCACG
GAATCTTACTGGAACAGGCACAAGGAGGAAGTCTGTGGACCCGGAAAGTT
TGGCGGAAACAATCGCTGCCTGTGCGTTTGAAGATGCGACTTTGGGGCCA
GATGGGGCAATGAGCTTCGAAGGATTTTATCGCTGGTACTCCAGCTCTTT
CGAGGTACCGTCGTCATCAGTACCGGTAGGAGACAGCCCTAGGTCTTTAG
CCTCGTCAGATGATGCACTGCGCACCGCATTGGACGTGGGGGAAGTACAC
CGCATATTCAAGCTCCGTGACATCAACGCGGCGGGGTTTATTTATGGTCT
GAGTGCAGCTTCGTGCCAAGGACGAGTCTCGTGGATATCTTTCCTCCGGT
ACATGCATGGCTTCGCAAACGCCAGACCGCTGACAGAAGAATCGCGTTCA
GCAGTAATGATGGCTAGGAAACTCTTCGACGTTTATGACGAAGACAAGCA
ACGGGAAGTGGACCTGCGCGTGCTGGCAAGCGGTCTCGCGATATTGTGCA
AGGGGTCCTGGAAGGATCGAGCCACGGCGTTGTTTAGCGTACTTGACACA
GAGAGGCAAGGATCCCTTTCCCGTGAAGACATGCGCGTGTACTTCTCTTC
CACTTCGAAGCTTCTGTGCAGCGTACAACCTAGTGTGCTGACTTCGACAA
ACTCGAGCGCCCTGACCGAGGCGTTTGGGACGAGCCCAGAAGAGGGGGTC
AATGAAACGGAACGTTTTGATGAGCGTATGTTCGCCAGCCTTTACTCCGA
CATGAACAACAGGGAGGGATGTCGAGTGACCAAGGGAACGTCGGAAACGT
TAGAGCAAGCACGGCAAGATACTCAACTTTACACCACTCCGGCGGCGCAT
ACATTCGGGGTTTTGAAGGACGCATTGAACGACCAAGGGCGCTTAACTAG
GCCGGCAATGCACCGATGCCTTCGCCAACTACGTGCGATGGTGCACAATC
AAGCTCGACATCGGGAGAATGAGAAGGTGAAGGGGGCCAAAGGAGCTGTC
AGTGAACATACCTACAGCTCAGCTGCAGCGGAGAACGTGATGAACCGGCT
ATTCGATGCCGTTGATGTGGGCAATGTGGGGGATGTGAACTTCTGCGAAT
TTGCAAGCGCTTTATCGGTGCTGTGCGGGGGTTCACGGGAGGAGAAGATG
ATGGCGATTTTCAATCTATTCCACCGCAGCGAAGGTGTAGGGATAACCGT
TCGTGATATAGCAACTTTTACCACGTCCGCGTTTCGAGTCATGTACAAGC
TTCAGCCCAGCCTCGAGGGAGAGGTCGGTATAACGCCTGAGGTGCTGGGA
AATGTGACGGCTTCGAACATGATGGAAGAAGTGGAACCCAACGGCGACGG
TCGAATATCTCCAACGAACTTCGGATGGTGGTTATCCGATGAAGGCAATC
CGAACGGTGTCAGACGTACAACTGCAGCAGGCTTCGCTTGCCACTCGTCA
CGTGTCGATTCGGTTGGTGAAGGTAGTACACAGCCAGATGAGGATGTTAC
GCAGCATGATGGAAACGCACGTGCAGGATTTCGGGGAGACCAGCTCGAGG
GACAAGGCCATATTGTGATGCGCGCGAGAAAATTACTCTGCCTGGACTGC
TTCAGCGTGAATGACTTGTTGGAAATTTTGGCGGAAGTTGCAATAATGAA
ACAGGGCGCTCTAGCTCAGGATGACTTCTGGCGCTGTATTGGCTACGTCT
TGCAGCTGGGAGGGACTGCAGAGGGCACGACTGAATGGGACGAGGCTTTC
TTGCTGACGGAGTGCATTTACCACGCCTTTGAAGGCAACGACGGGGTTGT
GGCCTTTGCAGCCATAGCGTGCGGTGTCTCAATTCTATGCCAATCGACGG
CCGAAGACAAGGTCCTGGTGGCATTTCTGTTGCTCGACACGGACGGAGAC
GGGCAGTTGGTCTTCGAGGAAGTCTCGATGTATATTGCCAGTGTGTTGAA
AGTGGTCTATGCCATCGGCCAGGGGGTCACAGCTATCATCAATCCAGACG
AGCTTGGAGCTGCGCTTGCTACTCAGTGCTTCAAACAAGCAAAGCTTGCT
ATCGATGACAAGAAATTCTTGTTGGAATATTGGCAGGGTCCCGAACGGAA
TGCGTCTTTGACAGCAGTGGATTCACACCCCATGGTGTAG
back to top