mRNA_P-littoralis_Contig12.127.4 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_P-littoralis_Contig12.127.4
Unique Name	mRNA_P-littoralis_Contig12.127.4
Type	mRNA
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))

Homology

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BLAST of mRNA_P-littoralis_Contig12.127.4 vs. uniprot
Match: A0A6H5KFB9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFB9_9PHAE)

HSP 1 Score: 369 bits (947), Expect = 3.080e-116
Identity = 221/505 (43.76%), Postives = 295/505 (58.42%), Query Frame = 1

Query:  373 AVKAKLADFGAALTGALITDNTLELVNGTFFLGSPSLGSKLFIRSCYKELSALILGGASSDTFHNIVVTGTPGIGKSVFGFYLLYLLRCQGKTVVFELKGKWYRFSYAGVVQASLEAFNERGYMDDPNSWYLSDPEDRPREYFEGTTVVLVSPKYERVKEFLKLADAQQIFMPVWGLDELLKCQRAVFPHVPSTFVEEAFGVVGGVARAVFNELKYVQLKYGIEDAVNKLSLATLREAISLLTSS-GRLPTDITGDKLFHVLSDSSDGFKRYTVTFASNFTSELVIRKIAEKGRRSLLDFAGAAIDNEDVARMFGGGSVVGSLFEHAAHQVIGWDRAGEEPLKMAILIDSGG----VLSGTDSLNFSFEKKEGFKGETIYSSFDQGVYYTAVPLNYPAIDSFGMDRRGDTLFFFQMKYAGV------KAVIGSAVERYWRTAS--KGSVSVKNCVYVYVVPEEPQWRLQAIKSAGIDEVR-KLLSEASDDFLSACAVCVVAIPFR 1845
            AV   LADFGA LT A++ DNTLEL +GTFFLG P L SKLFIR CYK+LS LIL G +  T   IVVTGTPGIGKS FGFYL+YLLR QG TVV E K  W+RFS  GV      +F   GY+   ++WYLSDPEDRP+E     TVVL+SP+  RV EF+K   +++ +MP W LDEL +C++AVFPHVP T V E F  VGGVARAVF+  K  Q+   ++ A + + L  L++ +S       ++ TD +GD L H+L     GF+ ++V FAS F   + + ++ +K    L  F GAA  ++++          G  FE  AH+ IG   + ++   M IL  +      VL G + L  SF K++ F+G +   +   G YY     N+ A DSFG+D    TL+FFQ+K AG+      KAV  + VE+YWR A    G+   K  VY +VVPE   W  +A ++   D  R       +D F SAC VCV+ +P +
Sbjct:   35 AVPKALADFGAVLTKAVVADNTLELADGTFFLGEPRLRSKLFIRPCYKDLSELILEGVTDGTMDKIVVTGTPGIGKSEFGFYLMYLLRGQGNTVVLERKDSWFRFSDEGVTVGYFYSFRRAGYLYGNSTWYLSDPEDRPKELLGLPTVVLLSPRKSRVNEFMKQPGSRRFYMPPWCLDELFRCRQAVFPHVPETDVRERFSKVGGVARAVFDAEKLKQVCLKMQAAASNMDLNLLQQILSRSRDDVDQVSTDRSGDALLHLLPIPETGFEEFSVDFASEFAHIVTLGELPKKEFAPLASFVGAAFAHDELGDKVTAERAAG--FETIAHKTIG-GASEQQWFDMRILSRASSSTKSVLEG-NRLRLSFVKEQSFEGNSFPDALVAGTYYRPGSPNFAAADSFGVDSGSKTLWFFQVKSAGLPPKEGEKAVKWTHVEKYWRRAKLHHGAPIKKRFVYAFVVPEGKVWN-KATETCEEDGGRGDWRRNVTDGFKSACDVCVIEMPLQ 534

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BLAST of mRNA_P-littoralis_Contig12.127.4 vs. uniprot
Match: D7G8Q1_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8Q1_ECTSI)

HSP 1 Score: 291 bits (746), Expect = 8.000e-91
Identity = 163/223 (73.09%), Postives = 181/223 (81.17%), Query Frame = 1

Query:    1 MTSLSAMSEGDEEEGGGDHDAREAADSSPAADEIRAVQDEIRGVERKIEDAEEETAEVVKKIDDIEAAIAGGSKYLGMTDPEALLKQLGRKEDEEE-------------KEEQLRDLLLKKEDRLPRIEQLRANNAPAVKAKLADFGAALTGALITDNTLELVNGTFFLGSPSLGSKLFIRSCYKELSALILGGASSDTFHNIVVTGTPGIGKSVFGFYLLYL 630
            MTSLSAMSEGDEEEGGGDHDAREAAD  PAADEIRAVQD+IRGVERK EDAE+ETAEVVKKIDDIEAAIAGGS+YLGMTDPEALLKQLGRKE++               +E  L +LLLKKEDR  RIEQLRANNAPA    ++DF AALTGA++T++TLEL NGTFFLG+  LGSKLFIR CYKE++ LIL G   D    +VVTGTPGIGKS FG+YLLYL
Sbjct:    1 MTSLSAMSEGDEEEGGGDHDAREAADRIPAADEIRAVQDDIRGVERKXEDAEKETAEVVKKIDDIEAAIAGGSRYLGMTDPEALLKQLGRKEEQXXXXXXXXXXXXXXXRELLLNELLLKKEDRFSRIEQLRANNAPAANKNVSDFAAALTGAVVTEDTLELANGTFFLGNSDLGSKLFIRHCYKEMADLILSGKVQD----VVVTGTPGIGKSTFGYYLLYL 219

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BLAST of mRNA_P-littoralis_Contig12.127.4 vs. uniprot
Match: D8LPP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPP1_ECTSI)

HSP 1 Score: 163 bits (413), Expect = 2.410e-43
Identity = 105/156 (67.31%), Postives = 109/156 (69.87%), Query Frame = 1

Query:    1 MTSLSAMSEGDEEEGGGDHDAREAADSSPAADEIRAVQDEIRGVERKIEDAEEETAEVVKKIDDIEAAIAGGSKYLGMTDPEALLKQLGRKEDEEEKEEQLR----------------------------DLLLKKEDRLPRIEQLRANNAPAVKA 384
            MT LSAMSEGDEEEGGGDH AREAAD  PAADEIRAVQDEIRGVERKIEDAEEETAEVVKKIDDIEAAIAGG++YLGMTDPEALLKQL          EQLR                            +LLLK EDRL R EQ RANNAPA +A
Sbjct:    8 MTGLSAMSEGDEEEGGGDHHAREAADRLPAADEIRAVQDEIRGVERKIEDAEEETAEVVKKIDDIEAAIAGGARYLGMTDPEALLKQL----------EQLRRXXXXXXXXXXXXXXXXXXXXXXXXXXXELLLKTEDRLSRSEQFRANNAPADQA 153

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BLAST of mRNA_P-littoralis_Contig12.127.4 vs. uniprot
Match: A0A835Z6Q5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6Q5_9STRA)

HSP 1 Score: 172 bits (436), Expect = 1.740e-42
Identity = 154/539 (28.57%), Postives = 247/539 (45.83%), Query Frame = 1

Query:  130 VERKIEDAEEETAEVVKKIDDIEAAIAGGSKYLGMTDPEALLKQLGRKEDEEEKEEQLRDLLLKKEDRLPRIEQLRANNAPAVKAKLADFGAALTGALITDNTLELVNGTFFLGSPSLGSKLFIRSCYKELSALILGGASSDTFHNIVVTGTPGIGKSVFGFYLLYLLRCQGKTVVFELKGKWYRFSYAGVVQA-SLEAFNERGYMDDPNSWYLSDP--EDRPREYFEGTTVVLVSPKYERVKEFLKLADAQQIFMPVWGLDELLKCQRAVFPHVPSTFVEEAFGVVGGVARAVFNELKYVQLKYGIEDAVNKLSLATLREAISLLTSSGRLPTDITGDKLFHVLSDSSDGFKRYTVTFASNFTSELVIRKIAEKGRRSLLDFAGAAIDNEDVARMFGGGSVVGSLFEHAAHQVIGWDRAGE----EPLKMAILIDSGGVLSGTDSLNFSFEKKEGFKGETIYSSFDQGVYYTAVPLNYPAIDSFGMDRRGDTLFFFQMKYAGVKAVIGSAVERYWRTASKGSVSVK-NCVYVYVVPEE 1722
            ++ +I D     ++V + ++DI AAI  G               L R   EE ++++L++L     D   R++ +      + ++ +  F  AL+ A   D+ L L +GT+F+G    G++++IRSCY+EL   I    +S T   +V+TGTPGIGKS +  Y L+ LR  G TVV+++   +YRFS   V  A ++ AF   G +  P+ W+L DP  +  P     G T+V VSP  ER K FLK   A   +MPVW  +E+ +C++ +F HVP + V++     GGV R V         +  ++ A+ K + A LR  I L        T    DK+ H+ +     F    + +AS +  + +     E  +  L  F  ++      AR+    ++ G +FE   H+++G     E    EP +            G  + NF+F +   F         ++GVYY     N  A DSF +      LF FQ+  A    V  +        A   S+  +   V  +VVP +
Sbjct:   15 LDAEIADTRRSLSKVERAVEDIFAAIERGQV-------------LPRYRTEERQDQELKNLT----DEKTRLQGI-LGTLTSQRSSVVTFWRALSRASDDDDCLALKDGTWFMGDYVRGNRIYIRSCYRELMDTIKAMVTSGT-RRVVITGTPGIGKSCYALYWLWHLRRAGNTVVYQIGADFYRFSGELVQHADTIGAFKNAGGLWHPDVWFLCDPARDHEPYGGCLGVTLVFVSPSTERYKAFLKEPRATTRYMPVWSQEEVQRCRQLLFDHVPQSRVQDLLEQWGGVPRFVLQFADDDTQQAKLQQAIRKCATAGLRATI-LNAGEDAGSTAALSDKVLHMCTAD---FVHVRLMWASQYAFDALCEAQGEASKGELRAFIASS------ARLPSLATLRGLVFEPYVHRLLGNGSCFEYRVLEPAQ-----------HGVTTFNFAFRRSVTFARLRDIWRIEEGVYYAPRASNLSAGDSFAII--DGVLFIFQITVAAEHGVKKAGTLDIVEAACGMSIGARPEFVLAFVVPPD 511

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BLAST of mRNA_P-littoralis_Contig12.127.4 vs. uniprot
Match: A0A6H5KCR9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCR9_9PHAE)

HSP 1 Score: 152 bits (383), Expect = 1.480e-39
Identity = 76/110 (69.09%), Postives = 83/110 (75.45%), Query Frame = 1

Query:  373 AVKAKLADFGAALTGALITDNTLELVNGTFFLGSPSLGSKLFIRSCYKELSALILGGASSDTFHNIVVTGTPGIGKSVFGFYLLYLLRCQGKTVVFELKGKWYRFSYAGV 702
            AV   LADFGA LT A++ DNTLEL +GTFFLG P L SKLFIR CYK+LS LIL G +  T   IVVTGTPGIGKS FGFYL+YLLR QG TVV E KG W+RFS  GV
Sbjct:   16 AVPKALADFGAVLTKAVVADNTLELADGTFFLGEPRLRSKLFIRPCYKDLSELILEGVTDGTMDKIVVTGTPGIGKSEFGFYLMYLLRGQGNTVVLERKGCWFRFSDGGV 125

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BLAST of mRNA_P-littoralis_Contig12.127.4 vs. uniprot
Match: D7G515_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G515_ECTSI)

HSP 1 Score: 150 bits (378), Expect = 1.350e-38
Identity = 98/143 (68.53%), Postives = 103/143 (72.03%), Query Frame = 1

Query:    1 MTSLSAMSEGDEEEGGGDHDAREAADSSPAADEIRAVQDEIRGVERKIED-------AEEETAEVVKKIDDIEAAIAGGSKYLGMTDPEALLKQLGRKEDEEEKEE-----------QLRDLLLKKEDRLPRIEQLRANNAPA 375
            MTS SAMSEGDEEEGGGDHDAREAAD SPAADEIRAVQ                   AEEETAEVVKKID IEAAIAGGSKYLGMTDPEALLKQLGRKE++  ++E               +LLKKEDRL RIEQLRANNAPA
Sbjct:    1 MTSSSAMSEGDEEEGGGDHDAREAADGSPAADEIRAVQXXXXXXXXXXXXXXXXXXXAEEETAEVVKKIDYIEAAIAGGSKYLGMTDPEALLKQLGRKEEQLRRKEGKEXXXXXXXXXXXXILLKKEDRLSRIEQLRANNAPA 143

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BLAST of mRNA_P-littoralis_Contig12.127.4 vs. uniprot
Match: A0A836CEN6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEN6_9STRA)

HSP 1 Score: 154 bits (389), Expect = 1.510e-37
Identity = 97/259 (37.45%), Postives = 134/259 (51.74%), Query Frame = 1

Query:  397 FGAALTGALI-TDNTLELVNGTFFLGSPSLGSKLFIRSCYKELSALILGGASSDTFHNIVVTGTPGIGKSVFGFYLLYLLRCQGKTVVFELKGKWYRFSYAGVVQASLEAFNERGYMDDPNSWYLSDPEDRPREYFEGTTVVLVSPKYERVKEFLKLADAQQIFMPVWGLDELLKCQRAVFP------HVPSTFVEEAFGVVGGVARAVFNELKYVQLKYGIEDAVNKLSLATLREAISLLTSSGRLPTDITGDKLFHV 1152
            F  AL+ A +  D  L+L  GT+F+G+   GS ++IR CY  L   I    ++     +V+TGTPGIGK+ + FY L+ LR  G+TVV++L   WYRF  A  VQ S +AF   GY+DDP +             F G T+V V+P++ R  EFLK   A + FMPVW  +ELL+C   +F        VP   V E F   GGV R V       + +  +  A++  S+  L  AI   T  G   T +  DKL H+
Sbjct:    1 FWRALSSASVDADGCLKLPAGTWFMGNRDFGSAIYIRDCYCNLMEQINKLVAARRVQRVVITGTPGIGKTCYAFYWLWHLRQTGRTVVYQLGPGWYRFCGATAVQGSRKAFLAAGYLDDPAAXXXX----XXXXXFGGITLVFVTPRWVRYHEFLKAPAATKRFMPVWSEEELLRCAELLFSGQDLERDVPQARVRELFRRWGGVPRYVLQYAHDDERQGTLTAAIHHCSVGDLHAAIRS-TGEGTGTTVVLSDKLVHI 254

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BLAST of mRNA_P-littoralis_Contig12.127.4 vs. uniprot
Match: A0A397UD55_9GLOM (Uncharacterized protein n=1 Tax=Gigaspora rosea TaxID=44941 RepID=A0A397UD55_9GLOM)

HSP 1 Score: 145 bits (366), Expect = 1.680e-33
Identity = 98/339 (28.91%), Postives = 166/339 (48.97%), Query Frame = 1

Query:  388 LADFGAALTGALITDNTLELVNGTFFLGSPSLGSKLFIRSCYKELSALILGGASSDTFHNIVVTGTPGIGKSVFGFYLLYLLRCQGKTVVFE-------LKGKWYRFSYAGVVQASLEAFNERGYMDDPNSWYLSDPEDRPREYFEGTTVVLVSPKYERVKEFLKLADAQQIFMPVWGLDELLKCQRAVFPHVPSTFVEEAFGVVGGVARAVFNELKYVQLKYGIEDAVNKLS------LATLREAISLLTSSGRLPTDITGDKLFHVLSDSSDGFKRYTVTFASNFTSELVIRKIAEKGRRSLLDFAGAAIDNEDVARMFGGGSVVGSLFEHAAHQVI 1365
            L  F   L  A I +N L+L +GT+FLG    G+ L+IR CY  L+ +I     ++  +   +TG PGIGK+ FG+YLLYLL+ Q KT+V+        L  K Y F    +       FNE  Y+D+ + WY+ D +  P       T++  SP+ +  KEF K+      FMP W  +E+ +C+  +F H+    VE+ +   GG+ R VF +      +  +E+A+NK +      +  +  A  +      + T++ G++      D    +    + FAS + +E VI K  +   + L +F  A+  + + +      ++ G +FE  AH+++
Sbjct:   36 LGKFWCFLENAKIDNNFLQLPDGTYFLGDKKQGTILYIRKCYLHLADIIF----NEKINRCRITGNPGIGKTFFGYYLLYLLQKQNKTIVYHKARQYPILFNKQYTFRSDNIFD-----FNE--YLDNTDVWYIVDGQ--PPLEVHAKTILFCSPQKQHYKEFDKMIGTSIRFMPAWSWNEINECRIGIFNHLEIAKVEDLYSRWGGIPRFVFEKALDSSQQNHLEEAINKCNTRLLDFVGEIDHADDISHRIVHIHTNLPGEE--EEKEDEETHYVNKFILFASEWVAEKVIDKFEKSYNQQLKNFVTASSSDNEYS------TLRGVIFEQIAHRIL 353

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BLAST of mRNA_P-littoralis_Contig12.127.4 vs. uniprot
Match: A0A397UC44_9GLOM (Uncharacterized protein n=1 Tax=Gigaspora rosea TaxID=44941 RepID=A0A397UC44_9GLOM)

HSP 1 Score: 139 bits (349), Expect = 4.080e-31
Identity = 90/332 (27.11%), Postives = 163/332 (49.10%), Query Frame = 1

Query:  388 LADFGAALTGALITDNTLELVNGTFFLGSPSLGSKLFIRSCYKELSALILGGASSDTFHNIVVTGTPGIGKSVFGFYLLYLLRCQGKTVVFELKGKWYRFSYAGVVQASLEAFNERGYMDDPNSWYLSDPEDRPREYFEGTTVVLVSPKYERVKEFLKLADAQQIFMPVWGLDELLKCQRAVFPHVPSTFVEEAFGVVGGVARAVFNELKYVQLKYGIEDAVNKLS------LATLREAISLLTSSGRLPTDITGDKLFHVLSDSSDGFKRYTVTFASNFTSELVIRKIAEKGRRSLLDFAGAAIDNEDVARMFGGGSVVGSLFEHAAHQVI 1365
            L  F + L  A I +N L+L +GT+FLG    GS L+IR CY  L+ +I      +      +TG PGIGK+ FG+YLLY L  Q KT+V+    ++          +S + F+   Y+++ + WY+ D +  P       T++  SP+ +  KEF K+   +  FMP+W  +E+ +C+  +F H+    VE+ +   GG+ R V     Y   +  +E+A++K +      +  +  A  +      + T++ G++  +   D    + +  + FAS + +E V+ K      + L +F  A++   +        ++ G +FE  AH+++
Sbjct:   78 LGKFWSFLKNAKIDNNFLQLPDGTYFLGDKKQGSILYIRKCYLHLADIIF----KEKMRRCRITGNPGIGKTFFGYYLLYFLSKQNKTIVYHKACQFPILFNKQNTFSSDKIFDFYEYLNNRDVWYIVDGQ--PPLEVRAKTILFCSPQKQHYKEFDKMVGTEIRFMPIWSWNEINECRIGMFNHLEIAKVEDLYSCWGGIPRFVLENALYSSQQNQLEEAISKCNNRLLDFVGEINHADDISHRIVHIHTNLPGEEEEN--EDEETHYIKKFLLFASEWVAEKVMDKFERNYNQLLRNFVTASLFENEY------NTLQGVIFERIAHRIL 395

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BLAST of mRNA_P-littoralis_Contig12.127.4 vs. uniprot
Match: D0NWG9_PHYIT (Crinkler (CRN) family protein, putative n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NWG9_PHYIT)

HSP 1 Score: 136 bits (342), Expect = 1.800e-30
Identity = 103/321 (32.09%), Postives = 160/321 (49.84%), Query Frame = 1

Query:  343 IEQLRANNAPAV----KAKLADFGAALTGALITDNTLELVNGTFFLGSPSLGSKLFIRSCYKELSALILGGASSDTFH--NIVVTGTPGIGKSVFGFYLLYLLRCQGKTVVFELKGKWYRFSYAG--VVQASLEAFNERGYMDDPNSWYLSDPEDRPREYFEGTTVVLVSPKYERVKEFLKLADAQQIFMPVWGLDELLKCQRAVFPHVPSTFVEEAFGVVGGVARAVFNELKYVQLKYGIEDAVNKLSLATLREAISLLTSSGRLPTDITGDKLFHVLSDSSDGFKRYTVTFASNFTSELVIRKIAEKGRRSLLDFAGAA 1281
            I Q  + N+PA+    KA L D       AL+     EL   T+ LG  +LGS+++IR CY  L  L L     +  +  ++V+ GTPGIGK+ FGF ++ +L   G TVV+E  G   RF +A   V Q S E F     +D P ++Y+ D   +P  Y+   T++L SP+     EF K  + Q  +MPVW L E+L+C++ ++   P   V++ F   GG+AR V    +    +  +E A + + L  L +A S L ++          +L H     S  F      FAS +  + V  ++ +K +R LL+F  A+
Sbjct:  137 ITQSMSLNSPALVAFWKAFLNDSTDVKADALV-----ELPRDTYLLGDSTLGSRIYIRHCYPALWELCLERIRDEKTNTPHLVILGTPGIGKTFFGFVIVLILARAGATVVYESGGLKKRFLFAHNVVAQGSQEDFVR--ILDQPTTYYIVDAV-KPA-YYPAKTILLTSPRRSIWYEFNK-TNCQSCYMPVWSLKEILQCRKLMYSDTPMAVVQDCFRRWGGIARYVLRFSQVGDQQVLLEKATDTVDLDWLVKACSQLDANDAQ----VSHRLLHYR--VSKAFDSEYFAFASQYVQQAVYNRLYKKDKRKLLEFIAAS 441

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig12.127.4 vs. uniprot

BLAST of mRNA_P-littoralis_Contig12.127.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KFB9_9PHAE	3.080e-116	43.76	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7G8Q1_ECTSI	8.000e-91	73.09	Uncharacterized protein n=3 Tax=Ectocarpus silicul...	[more]
D8LPP1_ECTSI	2.410e-43	67.31	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A835Z6Q5_9STRA	1.740e-42	28.57	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A6H5KCR9_9PHAE	1.480e-39	69.09	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
D7G515_ECTSI	1.350e-38	68.53	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A836CEN6_9STRA	1.510e-37	37.45	Uncharacterized protein (Fragment) n=1 Tax=Tribone...	[more]
A0A397UD55_9GLOM	1.680e-33	28.91	Uncharacterized protein n=1 Tax=Gigaspora rosea Ta...	[more]
A0A397UC44_9GLOM	4.080e-31	27.11	Uncharacterized protein n=1 Tax=Gigaspora rosea Ta...	[more]
D0NWG9_PHYIT	1.800e-30	32.09	Crinkler (CRN) family protein, putative n=1 Tax=Ph...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig12	contig	P-littoralis_Contig12:545099..551560 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	1
Start	1
Seed ortholog	4792.ETI30206
Model size	2152
Max annot lvl	4776\|Peronosporales
Hectar predicted targeting category	other localisation
Exons	3
Evalue	2.59e-31
EggNOG OGs	2CQRH@1\|root,2R5I5@2759\|Eukaryota,3Q7MI@4776\|Peronosporales
Description	Crinkler (CRN) family protein
Cds size	1869
COG category	S

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680789509.6087675-CDS-P-littoralis_Contig12:545098..545385	1680789509.6087675-CDS-P-littoralis_Contig12:545098..545385	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig12 545099..545385 +
1680789509.6190977-CDS-P-littoralis_Contig12:545460..545548	1680789509.6190977-CDS-P-littoralis_Contig12:545460..545548	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig12 545461..545548 +
1680789509.6301942-CDS-P-littoralis_Contig12:549783..551277	1680789509.6301942-CDS-P-littoralis_Contig12:549783..551277	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig12 549784..551277 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680789509.6404564-UTR-P-littoralis_Contig12:551277..551560	1680789509.6404564-UTR-P-littoralis_Contig12:551277..551560	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig12 551278..551560 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig12.127.4	prot_P-littoralis_Contig12.127.4	Pylaiella littoralis U1_48	polypeptide	P-littoralis_Contig12 545099..551277 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at P-littoralis_Contig12:545099..551560+
coding sequence from alignment at P-littoralis_Contig12:545099..551560+

protein sequence of mRNA_P-littoralis_Contig12.127.4

>prot_P-littoralis_Contig12.127.4 ID=prot_P-littoralis_Contig12.127.4|Name=mRNA_P-littoralis_Contig12.127.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=623bp
MTSLSAMSEGDEEEGGGDHDAREAADSSPAADEIRAVQDEIRGVERKIED
AEEETAEVVKKIDDIEAAIAGGSKYLGMTDPEALLKQLGRKEDEEEKEEQ
LRDLLLKKEDRLPRIEQLRANNAPAVKAKLADFGAALTGALITDNTLELV
NGTFFLGSPSLGSKLFIRSCYKELSALILGGASSDTFHNIVVTGTPGIGK
SVFGFYLLYLLRCQGKTVVFELKGKWYRFSYAGVVQASLEAFNERGYMDD
PNSWYLSDPEDRPREYFEGTTVVLVSPKYERVKEFLKLADAQQIFMPVWG
LDELLKCQRAVFPHVPSTFVEEAFGVVGGVARAVFNELKYVQLKYGIEDA
VNKLSLATLREAISLLTSSGRLPTDITGDKLFHVLSDSSDGFKRYTVTFA
SNFTSELVIRKIAEKGRRSLLDFAGAAIDNEDVARMFGGGSVVGSLFEHA
AHQVIGWDRAGEEPLKMAILIDSGGVLSGTDSLNFSFEKKEGFKGETIYS
SFDQGVYYTAVPLNYPAIDSFGMDRRGDTLFFFQMKYAGVKAVIGSAVER
YWRTASKGSVSVKNCVYVYVVPEEPQWRLQAIKSAGIDEVRKLLSEASDD
FLSACAVCVVAIPFRNSSNDVE*

mRNA from alignment at P-littoralis_Contig12:545099..551560+

Legend: CDSpolypeptideUTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_P-littoralis_Contig12.127.4 ID=mRNA_P-littoralis_Contig12.127.4|Name=mRNA_P-littoralis_Contig12.127.4|organism=Pylaiella littoralis U1_48|type=mRNA|length=6462bp|location=Sequence derived from alignment at P-littoralis_Contig12:545099..551560+ (Pylaiella littoralis U1_48)
ATGACGAGCTTGAGCGCGATGAGCGAGGGCGACGAGGAGGAGGGGGGCGG
CGATCATGATGCGCGAGAAGCTGCCGATAGCAGTCCAGCGGCGGACGAGA
TCCGTGCGGTCCAGGATGAGATCCGTGGTGTAGAGCGAAAGATCGAGGAT
GCAGAGGAGGAGACGGCAGAGGTTGTCAAGAAGATTGATGATATTGAAGC
TGCTATTGCGGGGGGCTCCAAGTACCTCGGAATGACCGACCCGGAAGCCC
TGTTGAAGCAACTAGGCAGGAAGGAGGACGAGGAGGAGTAACTGCGCAGG
AAGGAGGAGCAACTACGCAGGAAGGAGGAGCAACTACGCAAGAAGGAGGA
GCAACTACGCAGGAAGGAGGAGCAGCTCCGCGACCTCCTTTTGAAGAAGG
AGGACCGGCTCCCCAGGATTGAGCAGCTCCGTGCCAACAACGCCCCCGCA
GGTATAGAAGCGTCCCATTATGTGTGAAAATCTACAGCAGTGTACAGATT
AGGTCCTCCATTAACGAAAGTCGGAAATCATTATTTAAATCATTATCATA
CAGTAGTATGATTTTCCGAAAAACCCTTCGAGCCATATTAACGAAAGAGC
TAAAAAGGCTCTTTTGAAGACCTGTAAACGCCAGCAGAATGCAAACCTCT
GATGATGACGACACGACGGGTAAAACAGAACAATAAAATATACCGGTACT
GCTGTACAGACTACTCCGTACAGCAGTACAGCAGCACTTGGACGCATCAT
GTGCGTCCTCTCGCATGCAAGGCAAGGTCGTGGGCCCTGTGCACCAAGCC
TTGATGCCGGCAGACACCCCGTTTGTAGCTGTGTGTGGTGTGTGTGTATG
TGTGTTGGCTCATGCACTCAAGACTGCTGCTGTGTCATGTGCCTGTCTGC
CATGGGCTGTGAGACGCGGCTTCGTGCTCGTGACCTGTTACCTGCCTGTC
TGTGTCGGATGGTGTGTTGTGCAAAATGAAATGTGGGTCGTCATCATCAA
TCATGCAAACTGGTGTGTTTGTTTGTTGCGCAGTCATGTGTGGTGCTAAC
ATTGGCTTGCCTGGTGCAACGGCAAACCTCTATGCTACGTTGTGTGGTAC
TGCTGTTGGTTGCCTCGGTAGTATTTGGTCTGGCCAGCCTCGTGCGCGAG
GCACACCGTTCAGAAAAAGCCTTCGATCGGGTTAAGACCCCCAATAATGA
TTAATGGTTTTCTTCCAATTAAGTCTCTTTGGACTTCTTTGGTCTCGAAG
GGTTTTTCGGAAAATCATTATTTCCGTCGGTAGGGTAATGAAAGCTTGGC
CAATCAGAGACCTTCCATGATAATGATTTATTCCAATAATGATTTTCCGA
CTATCGTTAATACAGGCCCTTAGGAAATTTTGTCGCTGACCGACCGTAAG
TATTATTACGCGGGCTCCCTCGAGCGCTGAGCGTGAAGCGGGGGGACTCA
CCCCTCTTAGATCAAGACGTTTTCTGTGACTTTCCACCCTCGGATCCTCG
CGGAGTACCGCCCTCGCGAACGCTCAGCGAAAAGTCTTTCCAGCGCGGCT
CCACTGTCCCCCTGCCGCGAGATCGACGCTGGGCCGGCGACCCAAACAGC
GCAACACTTAAAATCTCCCAAATCTCCACAATTTCCGTTTCGAACCTTCG
CCTCTCACTATGTGTGTCACGCCTCTGAGTTTCATTGTAAATTTTAAATT
TCCACACCGGGACTGTGTCAGCAACAATCACTCGCATGCTGCACGATGCT
GATCAACTCGGGGTACGTGCACAGCAGTCAGCCGTCTAGGTTGCGAGACA
CCTAGAGTGGCGTTGGCTCTCAGACGTACAAGGAGCGCGCAACCGAAAAA
AGCCGCTGAACATGACGAAATTACCATTGGAAATTACCGTCGCGCACGTC
GGCTTTATTACCTCGTCAGGAACTGGATGACGAGCACTCGCACGATTGCA
CGATGCTCAGGACATGCATGTCCACAGCAGTCCGCCGTCCAGGTTGGGAC
ACACCTAGAGTTACGTTGTCTCTGAGTCGTAAGCAGACTCAAGCAAAACC
CGGAGGACACAATTCGCAAACAGGCGCTGAACACGCCGGCTCTATTACCG
TACATTGCTTGGTTCTCCCCCCCACCTTTTCCGCCTGGAAGCATGCGTTC
TTTGATTTCCCCCCCGGGTAAATCGTGTATCGCGGGGGGAAAAAACATCC
CCCCGGGTTACTCAATCTCCTCCCGGGGTAGCAATTTCCTTGGGGGGTTG
TGATTTTGTGGAGGTCGATTTTTGTTGGAAGAGAAGCGCAAACGTGAACG
TCACAGCAGTGCTTCCATTTTTCTTGCATGGAGCGTTCCTCTGGAAGCCG
TATTGAACGTACCGAAATCCCGGGATGACCGGCACCTCGCAGAAAAGGGA
GAAAAGATATTCATTTTTCCATGAAATGTTTGTGGACATGAAACATTGGG
ACTTCGAAGCAAACAAAACACATGGTACAGCAGTAAAACCTCACCACGAA
TAAACCTTACACCAACAGCTCTACGTCCTGTGTACCAAAACGACTACGGC
ATCACTTGTGCAAAAGCAGCGCGTGGGCTATTCCTCTTCTTCTTCTTGGC
ATCACTAGAGAGACGAGGCAGACTCCCCCAGCTGCTGCTGTTCCCCTCGT
CTTTTTCTTCGTCTTTACACTCCTCCCTCTGCTGTTACTGTTTGAAAGCT
TGCTCGTAAATCTTATTCATCGCGGGTTCATGTGTTTTCTGTGTGTGGGT
GTGTGGACCACGTTTGTGTGCACAACCCCCCGGGGTAGATTCCCCCCGGG
GTAGGTAGCGTTCACAAGGTAAAGACCGACCCCCCGGGGTACTTGAATCT
CCCCCCGGGGGGGTTGCTTTTCAGAAAAAAAAACGAACCCCTCCCCAGGG
GGGAGAACTAAGCAACGTACGGTAACTACGTCATTCGGTGGATTCAGATA
CCCGTCTATCACGTATAGAGGCAACTACAATCAAAATATACTAACTCTTT
GGATCTAGACGCACGAGCGTGCAGCATTTCACATTTTGGCTCTTCAGATC
TCAGCGAAGCGGCTCATTTTTGACCCCTCTCAGATTAATTCGCTGAGCGT
CGCCCGTCTCCGCGCGTGCGCACGGCACCACACCAGAACTCCCCCCTTCG
CAAGTGAGCCCACGAAATTCTTTCCTATGCGACCGCGCTGCGCACAAGGG
CTAATTCGTACGCGCTCGGTTCAGGCGAGGTCCGTGAAACCCAGTGAGAC
CACTACCTAACTGGCTGATGGTAATGTCGCTACAAAACTTTCGCTTTCCA
CGCCTGCGGCAAAATGCAAAAATTGAAAAATTCGGCAGCGAAGCGTTCAC
CCTCTCAGCGCCCCCCGAGACGGCAAGGCAGGCCCTGAAATTCAGTAGTC
TGGGAAACAGCAGTAGTACCAGGAGCTCACAGGACACATACCACAGCGGA
TGAGTAGGCAGTATCTCAGCCTAAGAACGTTCAATGTACGTGTCCGTTCA
GTAGCTGTCACGGGTTGAGATCTAAGGCCGAGTCGTGTGTGTTTGCGTGA
AGAAAGCACCTTTTGGCAGTCCCGCGCTGAAGAATCCTCTTCTTTTGAGG
CAATGAAACAGATTGGATGCTCTTTTTCGTTTTCGCCACTCGCATCAAAG
AGACCGTACTCACCCAGTCACCCTTGGTATGCCGGGTAACAATGACACAC
ATCCGTATGTTTGCTTTATACCGGTGCTGCACGCATGGCATGCTCGGACA
TCAGGCGCTGTTTTCCAACCAGGTATGTTGATACGTAGGTGACAAGCGTT
CTCGACCTCCGTATGAACATGATTTTTTTGCCGCGGATCGATGGTGCACG
CGGAGACGATCATTTTGGTTAAAACACATAATTCTAAATGCGAGATCGAG
CATCCATATAGTTGAGAAGGCACACAGGGAGGAGTAGGTGTCCTTGCTAC
TTTTTGTTCCATTCCAATAGACCCGAACAGAGTCCTAACCCTCCACATCT
GGGATCGAATCGTCTGGTCTTCCCAACGCCCACGAAATAATACCAGATCG
TGTGGAACAGCAGTCGAGGAGTAGTCACCTGGTGGCCGGTAGATACCTGT
AGAATGTGCGGGGACGAAGACCGATAGTTTTTTGCTGTGCAGTAGCACCT
CGATTCCACCTTCGACGCGCACTTACACTATGGAGGTGCATCATGTGTGC
TGCCATGATATTCTTCCGTGCACTCCTGGTTCTACTGAAGTGGGCTACAA
CAGCAGGGTCCTCGCTCTTCTTTCTTTACGCACGCTACACCCGTATTGCC
TCCGTTGAAAAGGTCATGTGGTTTCAACAGTGCCGAACTCGCGTGATGGC
GGGTTCGGTCTCGCACCATGTCCTGAATTCGACCGAGGGTATCCGTTGCG
TTTGTTGTCGCCCGACATAAGCTTGGTTATGATGCGCCTCTTTTGTATTT
CGACGAAGAATCTCGCTTCTTCTCCTGTCACCGTGCTTGTTGGAAGCGAT
TTTTTTTTCGTCGTCCTAGCATCTCTCGTGCCCGTTTCGTGTTTTATTGG
ATACAAACCCCCATGCAGACCCCCGTCTGTGACGTTGTCCCTAGCGCCGA
TTTTTGCGCTTCTTCGGCTGAACAAAATATAACACATGTTTCTTCCGTCA
TGGACGGACCTATTTTATTTCCTCTGCCCGTTGCGGTCAAAGCAAAACTC
GCAGATTTTGGGGCCGCTCTCACCGGAGCCCTGATCACAGACAACACCCT
GGAACTAGTAAATGGCACCTTCTTCCTCGGCAGCCCTTCGTTGGGATCCA
AGTTATTCATCCGTTCTTGTTACAAAGAGTTGTCAGCGCTGATCTTGGGT
GGTGCTAGCAGCGACACTTTTCACAATATTGTTGTTACAGGCACTCCCGG
AATCGGCAAGTCGGTGTTTGGTTTCTATCTGCTGTATCTGCTTCGCTGCC
AAGGAAAGACTGTTGTGTTCGAGCTAAAGGGCAAATGGTATCGGTTCAGT
TATGCTGGGGTGGTTCAAGCAAGTTTGGAAGCTTTTAATGAACGTGGTTA
TATGGATGACCCAAACAGTTGGTATTTGAGTGACCCGGAGGACCGCCCTA
GGGAATATTTTGAAGGTACAACGGTTGTGTTGGTGTCGCCCAAGTATGAA
AGAGTCAAGGAGTTCTTGAAGCTAGCCGATGCCCAGCAGATTTTCATGCC
AGTTTGGGGCTTGGATGAGCTACTGAAATGTCAGCGAGCTGTTTTCCCTC
ATGTACCAAGTACCTTCGTGGAGGAAGCTTTTGGTGTAGTTGGAGGTGTG
GCGCGAGCAGTCTTCAACGAATTGAAGTATGTGCAACTCAAATATGGAAT
AGAGGATGCGGTGAACAAGTTAAGTTTGGCAACGTTGAGGGAAGCAATTT
CGCTTCTGACTTCGTCGGGCCGCCTCCCAACCGATATCACTGGTGACAAA
CTCTTCCATGTCTTGTCAGACTCTAGCGATGGTTTCAAACGTTACACTGT
CACGTTCGCCAGCAATTTCACGAGTGAGTTGGTTATACGAAAAATTGCGG
AGAAGGGAAGACGTAGTCTACTAGACTTCGCGGGAGCCGCAATCGACAAT
GAAGATGTTGCCAGGATGTTTgGGGGAGGAAGTGTTGTGGGGAGCTTGTT
TGAACACGCTGCACACCAAGTAATTGGTTGGGACCGAGCCGGCGAAGAAC
CGTTGAAAATGGCAATCCTCATCGATAGCGGTGGGGTGTTGTCAGGAACG
GATTCCTTAAACTTTAGTTTCGAAAAGAAGGAAGGATTCAAGGGCGAAAC
TATTTATTCATCGTTTGACCAAGGGGTATACTACACGGCCGTGCCCCTTA
ATTATCCAGCTATCGATTCGTTCGGTATGGATAGGCGTGGTGACACGTTG
TTCTTTTTCCAGATGAAATATGCCGGTGTTAAGGCTGTTATCGGAAGTGC
AGTTGAACGGTACTGGCGCACTGCGTCCAAGGGTTCTGTGTCAGTCAAGA
ATTGTGTTTACGTTTACGTGGTCCCAGAGGAACCCCAATGGCGGTTGCAG
GCGATCAAGTCGGCCGGGATTGACGAGGTCAGGAAATTGCTGTCGGAAGC
AAGTGATGATTTTCTGTCAGCATGTGCTGTATGCGTTGTCGCGATTCCAT
TCAGAAATTCTTCGAATGATGTGGAATAGTCCATCTATGTCGCTGAAGCT
AAGGCTGCTGAATACTGTCTTGACGCGCGTTTTCGCGATGGATGATTGTA
TGACATCGATCAAGTCCCGTGTATCGTACATCCGAATCAGCGGGTGTGGG
CAAAAAACGCCGGCTGCGGAATCTAAAACTCTTGTGGAAGTAATTTGGAA
GTTGCCTAGGCAGTCTTCAGCGAGGTTTCGTCGTAGAGCGTCGGAAACAA
TGTGTCGTGTGATGAGGGGCGATCCAGATTTGGTCCGAGATATCGAGGGG
GGGTCGAATCAT

Coding sequence (CDS) from alignment at P-littoralis_Contig12:545099..551560+

>mRNA_P-littoralis_Contig12.127.4 ID=mRNA_P-littoralis_Contig12.127.4|Name=mRNA_P-littoralis_Contig12.127.4|organism=Pylaiella littoralis U1_48|type=CDS|length=1869bp|location=Sequence derived from alignment at P-littoralis_Contig12:545099..551560+ (Pylaiella littoralis U1_48)
ATGACGAGCTTGAGCGCGATGAGCGAGGGCGACGAGGAGGAGGGGGGCGG
CGATCATGATGCGCGAGAAGCTGCCGATAGCAGTCCAGCGGCGGACGAGA
TCCGTGCGGTCCAGGATGAGATCCGTGGTGTAGAGCGAAAGATCGAGGAT
GCAGAGGAGGAGACGGCAGAGGTTGTCAAGAAGATTGATGATATTGAAGC
TGCTATTGCGGGGGGCTCCAAGTACCTCGGAATGACCGACCCGGAAGCCC
TGTTGAAGCAACTAGGCAGGAAGGAGGACGAGGAGGAGAAGGAGGAGCAG
CTCCGCGACCTCCTTTTGAAGAAGGAGGACCGGCTCCCCAGGATTGAGCA
GCTCCGTGCCAACAACGCCCCCGCAGTCAAAGCAAAACTCGCAGATTTTG
GGGCCGCTCTCACCGGAGCCCTGATCACAGACAACACCCTGGAACTAGTA
AATGGCACCTTCTTCCTCGGCAGCCCTTCGTTGGGATCCAAGTTATTCAT
CCGTTCTTGTTACAAAGAGTTGTCAGCGCTGATCTTGGGTGGTGCTAGCA
GCGACACTTTTCACAATATTGTTGTTACAGGCACTCCCGGAATCGGCAAG
TCGGTGTTTGGTTTCTATCTGCTGTATCTGCTTCGCTGCCAAGGAAAGAC
TGTTGTGTTCGAGCTAAAGGGCAAATGGTATCGGTTCAGTTATGCTGGGG
TGGTTCAAGCAAGTTTGGAAGCTTTTAATGAACGTGGTTATATGGATGAC
CCAAACAGTTGGTATTTGAGTGACCCGGAGGACCGCCCTAGGGAATATTT
TGAAGGTACAACGGTTGTGTTGGTGTCGCCCAAGTATGAAAGAGTCAAGG
AGTTCTTGAAGCTAGCCGATGCCCAGCAGATTTTCATGCCAGTTTGGGGC
TTGGATGAGCTACTGAAATGTCAGCGAGCTGTTTTCCCTCATGTACCAAG
TACCTTCGTGGAGGAAGCTTTTGGTGTAGTTGGAGGTGTGGCGCGAGCAG
TCTTCAACGAATTGAAGTATGTGCAACTCAAATATGGAATAGAGGATGCG
GTGAACAAGTTAAGTTTGGCAACGTTGAGGGAAGCAATTTCGCTTCTGAC
TTCGTCGGGCCGCCTCCCAACCGATATCACTGGTGACAAACTCTTCCATG
TCTTGTCAGACTCTAGCGATGGTTTCAAACGTTACACTGTCACGTTCGCC
AGCAATTTCACGAGTGAGTTGGTTATACGAAAAATTGCGGAGAAGGGAAG
ACGTAGTCTACTAGACTTCGCGGGAGCCGCAATCGACAATGAAGATGTTG
CCAGGATGTTTgGGGGAGGAAGTGTTGTGGGGAGCTTGTTTGAACACGCT
GCACACCAAGTAATTGGTTGGGACCGAGCCGGCGAAGAACCGTTGAAAAT
GGCAATCCTCATCGATAGCGGTGGGGTGTTGTCAGGAACGGATTCCTTAA
ACTTTAGTTTCGAAAAGAAGGAAGGATTCAAGGGCGAAACTATTTATTCA
TCGTTTGACCAAGGGGTATACTACACGGCCGTGCCCCTTAATTATCCAGC
TATCGATTCGTTCGGTATGGATAGGCGTGGTGACACGTTGTTCTTTTTCC
AGATGAAATATGCCGGTGTTAAGGCTGTTATCGGAAGTGCAGTTGAACGG
TACTGGCGCACTGCGTCCAAGGGTTCTGTGTCAGTCAAGAATTGTGTTTA
CGTTTACGTGGTCCCAGAGGAACCCCAATGGCGGTTGCAGGCGATCAAGT
CGGCCGGGATTGACGAGGTCAGGAAATTGCTGTCGGAAGCAAGTGATGAT
TTTCTGTCAGCATGTGCTGTATGCGTTGTCGCGATTCCATTCAGAAATTC
TTCGAATGATGTGGAATAG