mRNA_P-littoralis_Contig12.105.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig12.105.1 vs. uniprot
Match: D7G669_ECTSI (Rhodanese domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G669_ECTSI) HSP 1 Score: 1368 bits (3541), Expect = 0.000e+0 Identity = 940/1514 (62.09%), Postives = 1022/1514 (67.50%), Query Frame = 3
Query: 771 SPDSTSPLGEEGSFLEIP--TVASPSQAQVESGGVLSPASSRIGSASLALGSPLNPHXXXXXXXXXXXXXXXXETKPESPRPAPPALQSFVRKEKVEVLRPLPADPAAALRELIAPELQATAAAAPDADADDPREESKAAPADSAADDVDYARRLCAATGGFLPADLRSAVWSLLLGRGKNPFDAGFVKWRQQRRET-PPSAGDTTAFAHKLDLRNDCLALARRLCD----------GTGENGGAGAVGSAKGDPEALASDVEEVLTFYCTRRSEAYEPVLCALVGPLFSMGLEPPAVSALLNPLAGSLTLFLGRGLTHAVRDLAWAHAHRRLHDLCTYHDPELVQHLNRSFPGWEMPLPAASVSRAETTALDQEAAAMVDDLESSLAGFVPRRRASMGGSVAQAEAV--------KGSESGVGRPARADGQGLVEPSLLVAASAGLGASVPLGRLLPLWDYLLVRHDKHFGFFLXXXXXXXXXXXLLLATGPELRLHLAETLSPSAMATLLVGGENGGAGAAATAKTTKSTLVLWCKEAEALDLATPESFRHHLALIGEIAEAEYEAAVRTRARKDSEGENAGV--VTGAAPEPSSGKEGGAPSNSSGEVAPHTA--EAAGQATATAXXXXXXXXXXXXXGKGLNRASLNRASLQRMRTMFKTAGDKLAADLKNLKLARA-ASDSRHASGELAAPTELSLPQLCLAVSAKELVAGVSGKGRRRPDGSDKAEGAGARGAGAKAVDAAEGDRGGLFRERQALSFFAVDCRPKEQVEAGRFPTAFHLDPSAMDNPEEMAETIMPVFEPLRKRAHVCLVGSGDGHLRARGLGTQDGKH---GIGSQKAARDEYSYVNTCALFFVKRGFPYVSVLEGGFAAAHELVMDTVNERGGDESGDAALSAAIVDHDSAACRLCQAKKLGGSGSSTTDGVGGVVGGMRFPLSPPLWARIGAADVSAHGPAADNTRDANTKGEKGSASSPFFSTKYTETEKASSSDHSTPSXXXXXXXXXXXXXXXXXSSHSSGTAPAXXXXXXXXXXXXXXXXAGSTLFKGGGAMFSGMKMNMSGIFNKGVANVPEEDVVGTEKVGRVSAADAGAEQSEAD----AGKGD-TAAADLAAKFRTSFGRFGSAKEIKKDVAGXXXXXXXXXXXAGLW-----EKE-DSAFGSLFRKAQSFKAADVAAAFADLRDGPKL------PGATSKAGSPAG-GAAGGGQQMVEIEELLGDEEADTDEDAGELFVIGDDGSEASENPDSDFEGFDGEHRPPRTGGVRTAADREVALLEHRLSGQIKGATMVVDDFLKVPGAKVFNVTKHKVTFHDVDSAPEPPSSASASPPKPEADEGDA----AATTNTTEAADEDGKETSVNLDAAAQDSEARGSEEVSPPVTSVRVRAVTELDRVVFLSQERILVLACPSGPANPGLVKSNHHLTELQKMTFMRRDPALVTLHYLAPEGREAGGDGPSAXXXXXXXXXXAMKRNVYRFDLDDKEAFIRIIRGAIQRFHA 5159
SPDSTS LGEEGSFLEIP V SP QA E+ + P SR S L GSP N XXXXX L+++VRKE+ EVLRPLP DP AALRE+ AP +Q P D D +EE AA ADDV Y RRLCAATGGFLP DLR VW LLLGRG+ P DAGF+KWR +RRE A D A ++KLDLRNDCLALARRLCD G +NG +G G AK DPEALA D+EEVLTFYCTRRSEAYEPVLCALVGPLFSMGL+ PAVSA+LNPL GS+TLFLGRGLTHAVRDLAWAHAHRRLHDLCTYHDPELVQHLNRSFPGWEMPLP AS S AET+ALDQEA+AMVDDLESSL GF PRRR+ GS AQAEAV GRPARA G+GLVEPSLLVAA+A LGAS PLGRLLPLWDYLLVRHDKHFGFFLXXXXXXXXXXXLLLATGP+LRL LAETLSPSAMA+LLV GE G +EAEALDLATPESFRHHLALIGEIAEAE+EAAVR RA++ EG + G A P S KEGG ++ S AP + +AAGQA A KGL SL RMRTM KTAGDKLAADLKNLKLAR +SR + +LA PTELSLPQLCLAVSAKELVAGVSG+ R R D GA K VDA G +G LFR+RQ L+FFAVDCRPK+QV+AGRFPTA+HLDPSAM+NPEEMAE IMPVFEPLRKRAHVCL+GSGDGHLRARGL +G GIGSQ+AARD+YSYVNTCALFFVKRGFPYVSVLEGG+AAAHELV DT+ G + GD ALSA IVDH +AACRLC +K GG+G++ GG +FPLSPPLWAR+GAAD S HG A + G+KGS S PFF K TEK S XXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXX LFKGG MFSGMK+NM IF KG A D A KGD A DLAAK R S GRFGS KE+KKD G XXXXX EK+ DS GSLFRKAQSFKAADVAAAFADLRDGPK G T G+ AG G GG QQ+VE+EE+LG E AGELFVIGDD SE SENPDSDFEGFDGEH PPR GG RTAAD+EVALLEHRLSGQIKGATMVVD+FLKVPGAKVF VTKHKVTFHDVD+ PE A+T A + ETS N D +RVRAVTEL+RVVFLS+ERILVLACPSGP +PGLVKSNHHLTELQKMTFMRRDP+LVTLHYLAP G + G A KRNVYRF LDDKEAFIRIIRGA+QRF A
Sbjct: 14 SPDSTSTLGEEGSFLEIPPAAVTSPFQALEEA---VEP-DSRPASGPLE-GSPPNLPIAEESTAAAAAXXXXXXXXXXXXXVPTATLETYVRKERAEVLRPLPDDPTAALREVAAPGVQ------PTEDGGDSQEEGTAA-----ADDVGYVRRLCAATGGFLPPDLRPVVWGLLLGRGRRPSDAGFLKWRARRREDLAAGAADAPAVSYKLDLRNDCLALARRLCDDDNVAGENEGGGADNGASGEGGGAKKDPEALAFDIEEVLTFYCTRRSEAYEPVLCALVGPLFSMGLDAPAVSAMLNPLVGSVTLFLGRGLTHAVRDLAWAHAHRRLHDLCTYHDPELVQHLNRSFPGWEMPLPGASASHAETSALDQEASAMVDDLESSLQGFAPRRRSMKAGSTAQAEAVGXXXXXXXXXXXXXXGRPARAAGEGLVEPSLLVAANAALGASAPLGRLLPLWDYLLVRHDKHFGFFLXXXXXXXXXXXLLLATGPQLRLLLAETLSPSAMASLLVDGEESLEG----------------EEAEALDLATPESFRHHLALIGEIAEAEHEAAVRARAQRRVEGGSDGPDGKAAAVPASSGSKEGGPAADGSTPSAPTSPRPQAAGQAGTEAA------------SKGLGHPSL-----LRMRTMMKTAGDKLAADLKNLKLARPNPENSRQSREDLAPPTELSLPQLCLAVSAKELVAGVSGRRRERAATGDXXXXXXXXGA--KGVDAG-GGQGALFRQRQPLAFFAVDCRPKQQVDAGRFPTAYHLDPSAMENPEEMAEKIMPVFEPLRKRAHVCLIGSGDGHLRARGLAGGNGHQVGGGIGSQRAARDDYSYVNTCALFFVKRGFPYVSVLEGGYAAAHELVTDTM-AAGAEGEGDVALSAVIVDHIAAACRLCLVQKPGGAGAA---------GGSKFPLSPPLWARMGAADSSTHGIIASTDDSSKGSGKKGSES-PFFPAKSPGTEKTS---------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLFKGG-TMFSGMKINMGEIFKKGAATSXXXXXXXXXXXXXXXXXXXXXXXXXXDKPEEAAKGDGEPATDLAAKLRISLGRFGSLKEVKKDAEGAGSEAAXXXXXXXXXXXXXSEKDKDSGIGSLFRKAQSFKAADVAAAFADLRDGPKTFGVASPTGTTQARGAAAGRGGRGGVQQVVEVEEVLG-EXXXXXXXAGELFVIGDDESETSENPDSDFEGFDGEHPPPRAGGARTAADKEVALLEHRLSGQIKGATMVVDEFLKVPGAKVFTVTKHKVTFHDVDATPEAXXXXXXXXXXXXXXXXXXXXXKASTAEEKGVAADSEVETSGNADGEXXXXXXXXXX-XXXXXXKMRVRAVTELERVVFLSRERILVLACPSGPTSPGLVKSNHHLTELQKMTFMRRDPSLVTLHYLAPGGPQEDGS------------PGATKRNVYRFGLDDKEAFIRIIRGALQRFQA 1440
BLAST of mRNA_P-littoralis_Contig12.105.1 vs. uniprot
Match: A0A4D9DAX1_9STRA (Rhodanese domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DAX1_9STRA) HSP 1 Score: 132 bits (332), Expect = 6.680e-27 Identity = 242/955 (25.34%), Postives = 360/955 (37.70%), Query Frame = 3
Query: 1209 VDYARRLCAATGGFLPADLRSAVWSLLLGRGKNPFDAGFVK----WRQQR-----RETPPSAGDTTAFAHKLDLRN-------DCLALARRLCDGTGENGGAGAVGSAKGDPEALASDVEEVLTFYCTRRSEAYEPVLCALVGPLFS-MGLEPPAVSALLNP--LAGSLTLFLGRGLTHAV-----RDLAWAHAHRRLHDLCTYHDPELVQHLNRSFPGWEMPLPA-----ASVSRAETTALDQEAAAMVDDLESSLAGFVPRRR--------------ASMGGSVAQAEAVK-------------GSESGV----------------GRPARADGQGLVEPSLLV--------------------AASAGLGASVPLGR-------LLPLWDYLLVRHDKHFGFFLXXXXXXXXXXXLLLATGPELRLHLAETLSPSAMATLLVGGENGGAGAAATAKTTKSTLVL-WCKEAEALDLATPESFRHHLALIGEIAEAEYEAAV------------RTRARKDSEGENAGVVTGAAPEPSSGKEG---GAPSNSSGEVAPHTA---EAAGQATATAXXXXXXXXXXXXXGKGLNRASLNRASLQRMRTM---------------------FKTAGDKLAADLKNLKLARAASDSRHASGELAAPTELSLPQLCLAVSAKELVAGVSGKGRRRPDGSDKAEGAGARGAGAKAVDAAEGDRGG-------------LFR--ERQALSFFAVDCRPKEQVEAGRFPTAFHLDPSAMDNPEEMAETIMPVFEPLRKRAHVCLVGSG--DGHLRARGLGTQDGKHGIGSQK-------AARDEYSYVNTCALFFVKRGFPYVSVLEGGFAAAHELVMDTVNERGGDESGDAALS----AAIVDHDSAACRLCQAKKL----GGSGSSTTDGVGGVVGGMRFPLSPPLWARIGAADVSAHGP 3560
+++ + LCA LP D++++VWSLLL P DA V+ W Q E P G T + R LA RR G+ G G AKG A+ ++ L FYC ++P + A G L +G E L + + G F L H RD H L YH P LVQHL+R GWE P PA S S++ T A V+ + +L G + R + G S+ + E +K GS V G + D G+V S L+ A+SA + G+ LL L + L+R D+ +G FL +L G LRL+L E ++ G + T+ + ST V W +EA +D +TP SFR +L E+ E A++ R A + + GA G EG G E P T + A ++ +G + A + ++ + +M F+ A A + + L+ AR +D L QLCL V+ +E V + + RP+ + + A + + A DRG +F +L + A+DCRPKE V GRFPTA+H+DP +D+PEE+ ++ EP + H+ L+G+G G L GK +Q+ A R + +++T ALF +K+GFPYVS+L+GGFAA H ++ E S +A S AA++DH + CR+C+ + L SGSS+ PLSP A+ S+ GP
Sbjct: 315 LEHLQLLCAHYPCGLPRDVKASVWSLLL-----PCDASLVRRYSAWCVQLPNGGGEEGPEEEGKPTDEEEDGEGRGAQPRSNLPLLAWIRREAQAVGQ-ALCGKEGGAKGRSVAVGEEIVRGLGFYCENFRVDFQPEMAAAYGALLVVLGWEGGDEGGLPSKAEVMGRFHAFCTWLLPHLTLPSWSRDGHLQRVHAAFRLLLNYHAPLLVQHLDRGRAGWEAP-PARRGGEGSSSQSWGTQEQARQEAEVEGMVGALEGRWAKSRDAGRCGRQSWVFPGSGRGTSIVEVERMKVASREKKDAANDGGSNHPVASLQEGPSPSTKAGREGHGSSGDSGGIVPSSWLMGHCLGSPLLAPPCQPSLTSPASSAAPPHAEETGKSWDDEDALLALVEACLLRGDRFYGLFLTTALFLRHKTEILCLQGSALRLYLGELVAGGKGIAQCYQPSLPGTPSTMTSTSASSTAVARWMEEAARVDRSTPISFRVNLTA-SELLSREEAASLLGSPGSVPEYFPRAEAADTTATTATAITAGADATSPLGPEGTMIGLQKGIGAEHPPSTCTQEQLAYDVHLSSLTLPLQRFIDALSPRGTDAACPSPSTPSSVGSMCPLPSRRSDQGQNVDTVTLGSFRWALGGPAREERQLRQARDDADLM----------ALLTTQLCLTVTPEEAVHALCLPSQSRPNACVRRDAHSE--AASSGITACSTDRGAHSIPSHDGSEDPAVFPVDRLSSLRYLALDCRPKEHVAMGRFPTAYHVDPGRLDDPEEITR-LLATLEPFKGSRHLLLMGTGASGGGLAPAVPKEGGGKGATPAQRFKEHMALAERQDMGHLHTAALFLLKQGFPYVSLLQGGFAAIHAFLLMKTRESSRASSAGSARSPLTLAALIDHVPSQCRMCKHEALLRFHKASGSSS------------LPLSPSPPAKASPGSSSSTGP 1236
BLAST of mRNA_P-littoralis_Contig12.105.1 vs. uniprot
Match: K8YQB7_NANGC (Tbc1 domain family member 23-like protein (Fragment) n=2 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YQB7_NANGC) HSP 1 Score: 116 bits (291), Expect = 1.840e-23 Identity = 77/209 (36.84%), Postives = 113/209 (54.07%), Query Frame = 3
Query: 2970 ALSFFAVDCRPKEQVEAGRFPTAFHLDPSAMDNPEEMAETIMPVFEPLRKRAHVCLVGSG--DGHLRARGLGTQDGKHGIGSQK-------AARDEYSYVNTCALFFVKRGFPYVSVLEGGFAAAHE-LVMDTVNERGGDESGDAALS---AAIVDHDSAACRLCQAKKL----GGSGSSTTDGVGGVVGGMRFPLSPPLWARIGAADV 3545
+L + A+DCRPKE V GRFPTA+H+DPS +D+PEE+ ++ EP + H+ L+G+G G L GK +Q+ A R + +++T ALF +K+GFPYVS+L+GGFAA H L+M T +G A S AA++DH + CR+C+ + L SGSS+ + SPP A G++
Sbjct: 111 SLRYLALDCRPKEHVAMGRFPTAYHVDPSRLDDPEEITR-LLATLEPFKGSRHLLLMGTGASGGGLAPAVPKEGGGKGATPAQRFKEHMALAERQDMGHLHTAALFLLKQGFPYVSLLQGGFAAIHAFLLMKTRESSRASSAGSARSSLTLAALIDHVPSQCRMCKHEALLRFHKASGSSS----------LPLSPSPPAKASPGSSST 308
BLAST of mRNA_P-littoralis_Contig12.105.1 vs. uniprot
Match: W7U2B4_9STRA (Tbc1 domain family member 23 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U2B4_9STRA) HSP 1 Score: 116 bits (291), Expect = 3.560e-22 Identity = 75/209 (35.89%), Postives = 112/209 (53.59%), Query Frame = 3
Query: 2970 ALSFFAVDCRPKEQVEAGRFPTAFHLDPSAMDNPEEMAETIMPVFEPLRKRAHVCLVGSG--DGHLRARGLGTQDGKHGIGSQK-------AARDEYSYVNTCALFFVKRGFPYVSVLEGGFAAAHELVMDTVNERGGDESGDAALS----AAIVDHDSAACRLCQAKKL----GGSGSSTTDGVGGVVGGMRFPLSPPLWARIGAADV 3545
+L + A+DCRPKE V GRFPTA+H+DPS +D+PEE+ ++ EP + H+ L+G+G G L GK +Q+ A R + +++T ALF +K+GFPYVS+L+GGFAA H ++ E S +A S AA++DH + CR+C+ + L SGSS+ + SPP A G++
Sbjct: 605 SLRYLALDCRPKEHVAMGRFPTAYHVDPSRLDDPEEITR-LLATLEPFKGSRHLLLMGTGASGGGLAPAVPKEGGGKGATPAQRFKEHMALAERQDMGHLHTAALFLLKQGFPYVSLLQGGFAAIHAFLLMKTRESSRASSAGSARSPLTLAALIDHVPSQCRMCKHEALLRFHKASGSSS----------LPLSPSPPAKASPGSSST 802
BLAST of mRNA_P-littoralis_Contig12.105.1 vs. uniprot
Match: A0A5D6XZM4_9STRA (Rhodanese domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XZM4_9STRA) HSP 1 Score: 105 bits (263), Expect = 6.680e-19 Identity = 59/164 (35.98%), Postives = 90/164 (54.88%), Query Frame = 3
Query: 2967 QALSFFAVDCRPKEQVEAGRFPTAFHLDPSAMDNPEEMAETIMPVFEPLRKRAHVCLVGSGDGHL--RARGLGTQDGKHGIGSQKAARDEY--------SYVNTCALFFVKRGFPYVSVLEGGFAAAHELVMDTVNERGGDESGDAALSAAIVDHDSAACRLCQ 3428
+ + +F VDCR +++ G+ PTAFH DP A+ + ++ E ++ PL+ + H+C++G G G + R + G G GS A RD+ + VN+ LF K+GFP+VSVL+GG+AAAH L+ + + D IVDHD+A C CQ
Sbjct: 550 EKIRYFIVDCRSDDELRGGQIPTAFHFDPDAVTD-RQVLEHVLATLNPLKGKVHLCVMGHGYGRIVGEIREQQRRVGPAGAGSPFAQRDDLFEAYATNLTRVNSALLFLTKQGFPFVSVLDGGYAAAHSLLYHSAHLTVDD----------IVDHDAAQCAFCQ 702
BLAST of mRNA_P-littoralis_Contig12.105.1 vs. uniprot
Match: A0A2D4BSB6_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BSB6_PYTIN) HSP 1 Score: 104 bits (260), Expect = 1.880e-18 Identity = 62/165 (37.58%), Postives = 88/165 (53.33%), Query Frame = 3
Query: 2961 ERQALSFFAVDCRPKEQVEAGRFPTAFHLDPSAMDNPEEMAETIMPVFEPLRKRAHVCLVGSGDGHL-----RARGLGTQDGKHGIGSQ----KAARDEYSYVNTCALFFVKRGFPYVSVLEGGFAAAHELVMDTVNERGGDESGDAALSAAIVDHDSAACRLCQ 3428
+ + FF +DCR E+ + G+ PTAFH DP A+ +P + +T++ PL+ H+C++G G GHL + T G+ Q +A + S VN LF KRGFP+VSVL GG+ A HE +M VNE G D ++DHD+ C LCQ
Sbjct: 1034 DASGIRFFVIDCRATEETQHGQVPTAFHFDPDAVADPAVL-DTVLATLNPLKGTVHMCVMGHGYGHLADELRQHAAPTTTPGELPFYLQPDFLEAFARDISRVNAALLFLAKRGFPHVSVLNGGYVATHEELMLHVNE--GFSVAD------LIDHDAPRCSLCQ 1189
BLAST of mRNA_P-littoralis_Contig12.105.1 vs. uniprot
Match: A0A8K1FFN4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FFN4_PYTOL) HSP 1 Score: 102 bits (254), Expect = 7.840e-18 Identity = 62/175 (35.43%), Postives = 93/175 (53.14%), Query Frame = 3
Query: 2952 LFRERQA------LSFFAVDCRPKEQVEAGRFPTAFHLDPSAMDNPEEMAETIMPVFEPLRKRAHVCLVGSGDGHLR--ARGLGTQDGKHGIGSQKAARDEY--------SYVNTCALFFVKRGFPYVSVLEGGFAAAHELVMDTVNERGGDESGDAALSAAIVDHDSAACRLCQ 3428
+FR QA + +F +DCR E+V G+ PTAFH DP A+ +P+ + ET++ P++ H+C++ G G++ R + + RDE+ S VN LF KRGFP+VSVLEGG+ A HEL++ + +E G D ++DHD+ C LCQ
Sbjct: 613 VFRSFQAPQNDESIRYFIIDCRASEEVHQGQVPTAFHFDPDAVTDPQVL-ETVLATLNPMKGTVHMCVMNHGYGYIADSLRQMMSASPSSYSDLPFFLRDEFLEAMARDISRVNAALLFLAKRGFPHVSVLEGGYGATHELLLQSGHE--GFCVSD------LIDHDAPQCTLCQ 778
BLAST of mRNA_P-littoralis_Contig12.105.1 vs. uniprot
Match: B8C1V7_THAPS (Rhodanese domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C1V7_THAPS) HSP 1 Score: 99.0 bits (245), Expect = 1.070e-16 Identity = 57/151 (37.75%), Postives = 84/151 (55.63%), Query Frame = 3
Query: 2955 FRERQALSFFAVDCRPKEQV-EAGRFPTAFHLDPSAMDNPEEMAETIMPVFEPLRKRAHVCLVGSGDGHLRARGLGTQDGKHGIGSQKAARDEYSYVNTCALFFVKRGFPYVSVLEGGFAAAHELVMDTVNERGGDESGDAALSAAIVDHD 3404
F AL F+ +DCRP+ E GRFPTA ++ P + +P+E+ + ++ +FE LR H+C++G G A D +K ++ S + CALFF+K+GFP+VSVL GGFAAAH + R G G S A++D+D
Sbjct: 1031 FASESALKFYLIDCRPESIAKEQGRFPTAVNMSPQKLQDPDEV-QKLLDMFEALRGAVHICIMGEGFASFPA----LYDHPLTAEEEKLLDEDVSRTSNCALFFLKKGFPFVSVLRGGFAAAHAFLF-----RNGPTMG-LPPSEALIDYD 1170
BLAST of mRNA_P-littoralis_Contig12.105.1 vs. uniprot
Match: A0A7S4SBJ3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4SBJ3_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 6.680e-16 Identity = 159/660 (24.09%), Postives = 245/660 (37.12%), Query Frame = 3
Query: 1560 YEPVLCALVGPLFSMGLEPPAVSALL-NPLAGSLTLFLGRGLTHAVRDLAWAHAHRRLHDLCTYHDPELVQHLNRSFPGWEMPLPAASVSRAETTALDQEAAAMVDDLESSLAGFVPRRRASMGGSVAQAEAVKG-----SESGVGRPARADGQGLVEPSLLVAASAGL--GASVPLGRLLPLWDYLLVRHDKHFGFFLXXXXXXXXXXXLLLATGPELRLHLA--------ETLSPSAMATLLVGGENGGAGAAATAKTTKSTLVLWCKEAEALDLATP------------ESFRHHLALIGEIAEAEYEAAVRTRARKDSEGENAGVVTGAAPEPSSGKEGGAPSNSSGEVAPHTAEAAGQATATAXXXXXXXXXXXXXGKGLNRASLNRASLQRM---------------------RTMFKTAGDKLAADLKNLKLARAASDSRHASGELAAPTELSLPQLCLAVSAKELVAGVSGKGRRRPDGSDKAEGAGARGAGAKAVDAAEGDRGG--LFRERQA---------LSFFAVDCRPKEQV-EAGRFPTAFHLDPSAMDNPEEMAETIMPVFEPLRKRAHVCLVGSGDGHLRAR-GLGTQDGKHGIGSQKAARDEYSYVNTCALFFVKRGFPYVSVLEGGFAAAHELVMDTVNERG 3353
++P+L LV + S G+ P A S +L N + S+ L L+ + R L H R + L YH P LV HL+R PGW P + + + ++ + +VD+ E+ + + QG++ S V+ AG G+SVP RLLPLWD LL D FF L++ G EL L ++L S ++ V EN GA + C ++AL +TP E+ L + +IAE + +A + A+ E A + E A K +R L L+R + L K +K + A ++ + T S Q+ L VS E++ + R G GD+ G + R R A + F+ +D RP E E GRFPT+ L P AM +P+++ + + +FE LR H+C++G G A GL +D + A D+ + + CALFF+K+GFP+VS+L+GGFAAAH + +E+G
Sbjct: 541 WDPLLPPLVCAVLSSGMPPAAASVVLANIMPVSVPLM---ALSASERLLTAKSLHSRFYLLACYHFPLLVLHLDRYVPGWHWPKLLETKNVVGKSNVEDDGDDVVDNNNEKXXXXXXXXXXXXXXXXXXXXGPPSPSRINEENATQKVRNIEAQGIIPMSWFVSHIAGECGGSSVPYERLLPLWDILLTNGDNSMKFFFALSALEKYMDTLIMLRGDELAAALKTIMNLKEHDSLEGSFVSHGEVEEENKNGGAIENDAVDHKFVKDLCNRSKALVESTPTSVIEKLRNAEDEAINKALIVRQKIAEEKLQARLEAEAKAHKEAMEAERI-----------------RKEDEARAALIRARLVIYYKTHNPEKVDTVDKILEKYGDRTDLLDIKLKRKYGASFLPPVPHMTPIILSAKTNNFLSSMNHGLTIKKKQIKQSVEARRAKKNAVLELEDTSFSELQVALKVSPGEIMPTLCSTKVSRLGG------------------VVRGDKDGRVVMRGRYAVVENTDIAHIKFYLIDSRPDESAKEQGRFPTSISLSPEAMMDPDKVQQQL-DMFESLRGAVHICVMGEGFSKFPALYGLKLKDEEIAH-----AEDDEARTSMCALFFIKKGFPFVSILDGGFAAAHAWLSREGSEKG 1156
BLAST of mRNA_P-littoralis_Contig12.105.1 vs. uniprot
Match: K0TQ79_THAOC (Rhodanese domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TQ79_THAOC) HSP 1 Score: 94.4 bits (233), Expect = 2.590e-15 Identity = 168/744 (22.58%), Postives = 284/744 (38.17%), Query Frame = 3
Query: 1266 RSAVWS-LLLGRGKNPFDAG-----FVKWRQQRRETPPSAGDTTAFAHKLDLRNDCLALARRLCDGTGENGGAGAVGSAKGDPEALASDVEEVLTFYCTRRSEA------YEPVLCALVGPLFSMGLEPPAVSALLNPLAGSLTLFLGRGLTHAVRDLAWAHAHRRLHDLCTYHDPELVQHLNRSFPGWEMPLPAASVSRAETTALDQEAAAMVDDLESSLAGFVPRRRASMGGSVAQAEAVKGSESGVGRPARADGQGLVEPSLLVAASAGL-----GASVPLGRLLPLWDYLLVRHDKHFGFFLXXXXXXXXXXXLLLATGPELRLHLAETL-------SPSAMATLLVGGENGG---------AGAAATAKTTKSTLVLWCKEAEALDLATPESFRHHLALIGEIAEAEYEAAV----RTRARKDSEGENAGVVTGAAPEPSSGKEGGAPSNSSGEVAPHTAEAAGQATAT--AXXXXXXXXXXXXXGKG-LNRASLNRASLQRMRTMFKTAGDKLAADLKNLKLARAASDSRHASGELAAPTELSLPQLCLAVSAKELVAGVSGKGRRRPDGSDKAEGAGARGAGAKAVDAAEG----DRGGLFRERQALSFFAVDCRPKE-QVEAGRFPTAFHLDPSAMDNPEEMAETIMPVFEPLRKRAHVCLVGSGDGH---LRARGLGTQDGKHGIGSQKAARDEYSYVNTCALFFVKRGFPYVSVLEGGFAAAHELVMDTVNERG 3353
R +WS L+ G+ N + G + +W + E P + F+ +D +L R C G + + E++ S V + F+ R+ +P++ + + G P A S +++ + S L L+ + +A H + L YH P L+ HL+R PGW P ++ +E EAA A +P ++A+ + K + GLV S V AG + P +LLPLWD+LL R D + +FL LL++ G EL L + L S A + GG+N A + ++T +++ + A+ D A ++ + ALI +A++EA + R +D+E + A V + V P E GKG L ++ R F + + K++++ A + + ++ + + + L VS E++ V K D A G D+ +++L F+ +D RP E GRFP A +L P + +P+++ + I +FE LR HVC++G G L L ++ Q+ ++ + + ALFF+K+GFP+VS+L GGFAAAH + T E G
Sbjct: 351 RMHLWSKLICGKVVNAVEEGSLAESYREWVARNEEIPTNDD----FSSSVD------SLLERACGGK----------MSDEERESMRSRVASLTYFHNRRKGGGPDGDVTIDPLIAPVALAILRAGFSPAAASVIMSHIEPSSMPLLR--LSTREQLVAAKALHFEFYLLACYHLPLLIMHLDRHCPGWFWPQSDQAIEVSEIKDSKDEAAH---------AQAIP--------ALAEVRSKKSDKD----------NGLVPLSWFVTNFAGQCGGKSSFAAPHHQLLPLWDHLLARGDHSWKYFLAIAILDKHSNVLLMSRGDELYSELEKILRFEGSLFSEEAFVGMAGGGDNPDDFESVSDWLASTKSLMESTPGSVLDLLRSAD--DRAVAKALKAKQALIDRELQAQHEAHESSLRKEREERDAEAKKAEVKARLVAYYRT-------------VQPEKVETVDTIMKVFEGRLGVLNEKLKKKYGKGFLPEETIEDQVANSTRQFFNSVNQSINDTKKHVQVNVAERRKKTTTAKIETENKHAYTPVVLEVSTTEVIPAVCTT---------------------KGHDLATGQKIHDKKACI-SKESLQFYLIDSRPGSLSKEQGRFPKAVNLSPETLQDPDQLLK-ITDLFEGLRGAVHVCIMGEGFASFPVLYNHALSPEE-------QRLLEEDRARTSDAALFFLKKGFPFVSILRGGFAAAHAYLTRTGYEMG 1000 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig12.105.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig12.105.1 >prot_P-littoralis_Contig12.105.1 ID=prot_P-littoralis_Contig12.105.1|Name=mRNA_P-littoralis_Contig12.105.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1643bp MDDIFGPEPTEKTPETAVAPTSTNNLEEFDDIFGGTPAAEDGGASSEQAKback to top mRNA from alignment at P-littoralis_Contig12:469569..482552+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig12.105.1 ID=mRNA_P-littoralis_Contig12.105.1|Name=mRNA_P-littoralis_Contig12.105.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=12984bp|location=Sequence derived from alignment at P-littoralis_Contig12:469569..482552+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig12:469569..482552+ >mRNA_P-littoralis_Contig12.105.1 ID=mRNA_P-littoralis_Contig12.105.1|Name=mRNA_P-littoralis_Contig12.105.1|organism=Pylaiella littoralis U1_48|type=CDS|length=4929bp|location=Sequence derived from alignment at P-littoralis_Contig12:469569..482552+ (Pylaiella littoralis U1_48)back to top |