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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 0 |
| Model size | 542 |
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Cds size | 336 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789501.6228487-CDS-P-littoralis_Contig1190:43615..43830 | 1680789501.6228487-CDS-P-littoralis_Contig1190:43615..43830 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1190 43616..43830 + |
| 1680789501.6384811-CDS-P-littoralis_Contig1190:46480..46531 | 1680789501.6384811-CDS-P-littoralis_Contig1190:46480..46531 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1190 46481..46531 + |
| 1680789501.6534624-CDS-P-littoralis_Contig1190:48688..48758 | 1680789501.6534624-CDS-P-littoralis_Contig1190:48688..48758 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1190 48689..48758 + |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789501.6628876-UTR-P-littoralis_Contig1190:48758..48962 | 1680789501.6628876-UTR-P-littoralis_Contig1190:48758..48962 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig1190 48759..48962 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1190.2.1 >prot_P-littoralis_Contig1190.2.1 ID=prot_P-littoralis_Contig1190.2.1|Name=mRNA_P-littoralis_Contig1190.2.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=112bp
TNTINHQHNQTLSTPKTRLQPQQVKQLPQLRHEILHRGSCFHHPLGRYSC
TGDDDRRAQQEQHRQAEHCCCRIRGSVALPERKPPQTRRAFHSTWPDPRL
VQLRLRRLLRR* back to topmRNA from alignment at P-littoralis_Contig1190:43616..48962+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig1190.2.1 ID=mRNA_P-littoralis_Contig1190.2.1|Name=mRNA_P-littoralis_Contig1190.2.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=5347bp|location=Sequence derived from alignment at P-littoralis_Contig1190:43616..48962+ (Pylaiella littoralis U1_48)
ACGAACACAATCAACCACCAACATAACCAAACCCTCTCCACTCCCAAAAC
TCGTTTACAGCCACAGCAAGTCAAACAACTTCCGCAGCTTCGTCATGAAA
TCCTCCATCGTGGGTCTTGCTTTCACCACCCTCTTGGCCGTTACAGCTGC
ACAGGAGACGATGACCGCCGTGCCCAACAAGAACAGCATCGACAAGCAGA
GCACTGCTGCTGCCGGTGAGTTTGATTTAACCTGAAAGCGGTGCACGACA
TGAAAATATGGATACAGTAGAACATTGTGTTTATATGCTGTGAGCGTCGT
GTTCGCTCCCAGAATTCGACGTTGGTTTTGTTGTGGGTAGATCCGAAATA
ACAAAGGCAGTTGTAAGCGTCGCCTGCATGATTGATGCAGAACAAACGTA
TAATAGCAATCAATGTGGTTAGGTTCGTTGGCATATACAGCCCCAGGTGC
AAGGCAATTTGCCAATATAATACATGAGACGACACATTTTGAACAAAAAG
TAATCTTAATTTGAACAGCGATCGCCGTGGAGTTTATTGTTTCTGGGCTT
CTCGCGTGGGAATGGATAATATGATAGGACCATCAAATATGTGACTATGG
CAAAAGGATGATATGGTAGTGGTTCGAGGGATATCGGTCCCATCACGAGA
ATCCGATCCCACCACCACTGTGCTTCCTTTGTCGGACACAGCCACTACCA
TGTGCTGTCTAAAAAATGAAATGCTCCATTCCAGCCCCGAAATTATCCCG
AAATTGCCTTTCGAAATTGCCTGAAATGGTCCCGACTAGCCCCGGCATAC
ATAGTAGTACTCGTTTCCAAATGTAGGGGTGATGGGTTGCAATTAAGTTG
GGCGACTCCGTAGAAACCGTACCCCGCAGGTAGGTATGTTTACCTCTACG
CTATTGTTCGTCGAAGTAACTGGCAATGGATGAAGGTACCCCTGTATTCC
TGCAGGCCGTGATGTACACCCATCAGATGTTGATGTACGAAGTACATCTG
AGTATATCATGCCGTAAGCTCCGGTCCGTTACCCGGGGAATAGATTTGTT
TTCACGGGGGTGAGTAAAACATCTGGGGGCTCTTTATGCTACTAATGACT
TGTTTTCCCCGGGAAGAAGTCATCGGGTGCAAAAAACGTTTTTCCACATG
CACACAGCACACACCCTGTGCAGCCCGCCGCGGATCACTATCTTACTATG
CCCGTATTATTACTGGATGACAACAACGACGGCCGGAGGTCCGCACATGA
ATGGCTTGCACGCGCGGCTGCAACACAGCGCCGAGGGTACCGTGTCTGGC
CACAAGAAAGAGTCTCAGGGTTAGCACGTGTGCCAGTCGCGTGCACGCGC
TCCTTGGTAAAACACGCGCTACTTTAGAAACATGCGCTACTTTGTGAAAC
ATGACTTCAAAAAGGGGGGGGTATATTATTCGTACTGATCAATGGAAATC
CCCCGAGGGGTAAGGATAAGGGGAAAATAACCCCTTATTTTTTCAATCGC
AAGTAATATTGACCCCCCCTGCTGCGACTGGCTCAGTTTTCCAAGCTTTT
CGTCAAATATTTCGGTGGGGGGGCTCAATTTAGACTGCGATACCCCACAT
GGAAACCGGCAAAGCCAAGCCAGCACGCCATTACATTGAAGCGGGGAACC
TTGACACACACATGCATTTGCAGTTCGTGGCCCCCTCATCATAGCTCATA
TGTCCATACAGCATACAAACAAACCCCAGCTTCCCATGAATCGTTGTTTA
CCATCCGCAATACCACGAACATACGCCGATAAGACAGGACCGAAACCATA
TTTTTCGCGAATCACTTGATGAGCGAATTCCCGTTTTTATAGAACGATCC
ACACCTACCTGGAGATATCGATGAAAGGGCTCGTTTGCCGCACGCACCCA
TTTTCGAGGTCGTCCTGTCATGTATGACTGATAACTCCTGGCAAAATGGC
TGGCAAGATCCGGTTTCCGACACTTATATCACGCATAAAAAGTTGTAAAA
CAACGAATTCCCGACGCACACCTGCTTAATTCTGAGAGCTGCCAGATTCC
GTTGCGATATTTGTATTAATAAAACCGACGAAAATAAACTCAAAAACCGC
ACCCCGGGCGTGATGCTCCAAACCTTTAATTAATCACAACGTTTTAGGTT
GTTCAAAGTGACAGACGTCATCATCGTTGCCCTAAACAACCGATGACTCT
GCTATTCACTCAACCATCGATCATGAGACCCTAACTTTGAATCGCAATAT
TCAAACTCACATGATGGCAGAAACTCCGCGATAAGCAACCAAAGACACGG
CACAACTGTAACTGGAATTATTTCATACACACCACCGCAACGATTGGGCA
TTCAACGCAAGGCCTGCTGTAAGCTTTTTTACTGCAGCCTCATCACGCTA
AAGCGTTCTTGTTCCGCAAAAAAGTGACCTGTACCGATTTCCGCCACGGT
TTCTTCGCGTGCTCTAGCGTCGAATACTAAAACTGAAGCCTGTTTAGGAA
AATGCCAGTCATTCATGCTCAATACGTTTTTGTATTCCCAAACAGGCTTT
GCTTGTCAACGGTCGATGGTCATGGCAGATAAGTAACTCTGGAGATGGCG
AACCCGGGTAAAATTGTCGGATACATGCAGGGTTGAGAGTTGGCTGTAGA
ATTGGGGAAACTTCAGCGCTGTAATGTTTTGCGTGTTGCGTTCCTTGTGC
TAGATGAAATATTTAATCGAAGCAGTTCACGCTTTCGGAAGAGCCCGGTG
GTGTAAAATGTGTCTGAATGAAAAATGACAAACGTGTCTCTGCGGCTGCT
AATCATATTCGCAACCACAAAATAATACTTCGTATGATTTCTCTCTTTTG
CGCTCATCGTCGCAGAATACGTGGCTCGGTCGCCCTCCCTGAAAGGAAGC
CGCCGCAAACTCGAAGGTGAGAGTACAGCAGTAGTAGCATCACGTCTGGG
ATTTAGCGCTCGATCGCGAATCTGCACAGCAAAAAAGGCGAATTAAAATA
TATTTTGTTCAATGTGGTCAAGCTTGTGGGCGAAATTTAATCCTCGCTCA
ACCGAATAGGCTACTCCCGATCCCATCGCACAACAAACGCGGAGAACATC
GTCGCAAAGGATTTCTAGGTTGAAGTCTATGTGGCCAATACAAGCACATT
CCTGGGATACTTTCCGCGGAATTCCCTCGGGCAGTGCACTTTTTTCGTGG
ACGAATCTGGACTTCGAGAGAAAATCTTTTGTACACACCTTGTACCCGTG
TGAGTGTTTGGCGGCGCGTTTTTCAGTATGTCTTGTTTTCCTTGCGTACT
CCGCGCATTATCGTCATGTACGAAAACAAATACGGCACAGACTAGTGCAC
AGCCGACAAGGTTCGTTCATGAAGTGGCTCAGAAAAAGCGTGTTCCTTTG
CAGTTCTTGTATAATTTTGTGATAAATTCTAAGTAGTTCTCGAGCAACCA
AACATAGTCTTGTTTAATTCCGATGGTGATGCGCGCATCTCGGCGGGTAG
AGATCTACAGTAGACGATCTCCACAGCTCGTACCAGCCTACCTAACAAAC
CCACCCATTGTTCGACATGTCCCCATGAACGTGTAATATGCGTCACGGCT
GCAAAATTTTAGGCGCGCGCTGTTTTACTGGAGTACCTTCTACTAGCAAA
GTATTTAAAGCTTCGACGTGTCAAGCATACTACCCCGCCGGGAGCTACAC
ACGTTCACCCGCTTCTTTCTCGTCTTTTTCAGGGAACAGTTGCGTACTAC
TGTTTGTCCAACTGTATCGAGATGCGCGCATGCACCTGTTCTTCTGTTGA
CCAATAATCTTGAAACAAACCAAAAACGTTCTGCGAATAAAGCCCTGATG
CAACATCAGAGAGGAAACATCCCTTTGAGACTGGACAGCTGAATGTTAAA
ATTCAAAATTCATCTGCGGCAGCTTGGGCCAACAATTAATGACCGACCGT
ATCGTTGACCATCAGGACAATATTACACAGGAGGAGCACCACACAACAAA
CATCATACTTCGTGTATATTGCAAGAGCTTACGAGACGCCATGGAAAGTG
TTGCTGCCGCACGGACCACAAGCCCACGTACAGGCTTAGAAGCCAACGTG
CGGGCTTGCCTTTCATACTATCAGAAAACATCTCGCAAAATCTATTCATC
GGAAACACACACGTGACATGTTTCATGAACGCCCCGAACGTTAATGACAC
ATTCAGAAAAAAAATGGCCTATGGCCGCCCATGACGTCTCTTCACGAACG
TTCGTTCAACGTTGTGTGAAGTATTTTGTCGGTTGGCGTTTGTGAGGTGG
GTTCTTCGACGAGCTCGCGAAATATATACTTCGTACCTAACAATGTACCA
GGTGCCACATTATTCAATTATTTTGAGTCTCGCGACGCATGAGGCAACTT
CTCACCTCTGACCTCAATACGTGAGATATACCCCATAGTGCCGCCGGCAA
GTATTCACGGAAGCCTCTCTGCTACGTGCCAATCGTACTGTAGCAGGACG
ATCCAAACGATACAACGAAACTCACACTGCTTTATGCAGCACAACATGTC
AAACGTCAAATTTACTACTTTTGTACCAAGGTGTGATGCTATTTTTTGTA
GTCACTTCATGTCCCATCACCCACACTGAAATGCTGTCGACTGGTCGTAC
TCTGTGATCGTGGTTTGTGCTGTGTTTTTCTCCTTGTGCCTCCCGCGGCC
CATTCGGGGCCATGACAAACGATTTAATCTTGATGGTACAAATGACTACG
GAGTATATCATTCGAAATGGGCACAATACCGCTGGGGGTTCTGCGCTTTT
GGGGTTGGACGCATTCCGTCGTAGTTTTCTATCGAAGTAGAACCAACTTT
GGCAAGACTTCGCCGTCCTAAACCAACAGCAACGCCCGTAGAACGATCCT
TGAAACCTACGTGTGAATGACGGTGAACGCGGTGACTGGTGCGACTACTG
TAGTCCTCTGATTGCCCAGAAAGTCGACGAAAGCACTCGCTGCCCCACCG
ATGTCTCATGACATACCCCTCCTTTCCTATCGCTGCCTCTCTGCCTCTGT
ATGGATCCCCCAACCCTGCCCAGAGCCTTTCACTCTACCTGGCCCGATCC
CCGTCTCGTTCAGCTTCGACTACGACGACTACTTCGACGATGACTTCTCC
CTCTCCTACACTTTCTAGGAGGGGCGTACGCACAGCCGACGTATATCTTC
GTGCGTACAAGTCCATGCGACGGCCGCTTCTTTATTTCGTGGAAGAGGTC
GCTCGTGTCTAATGTGTGCCACCCAGCTGCAGGCGTCGTAGATACGCGTG
TGATGCATGAATTCGCAACGGCGGTAAAATACGTGCGAGACACACAG back to topCoding sequence (CDS) from alignment at P-littoralis_Contig1190:43616..48962+ >mRNA_P-littoralis_Contig1190.2.1 ID=mRNA_P-littoralis_Contig1190.2.1|Name=mRNA_P-littoralis_Contig1190.2.1|organism=Pylaiella littoralis U1_48|type=CDS|length=336bp|location=Sequence derived from alignment at P-littoralis_Contig1190:43616..48962+ (Pylaiella littoralis U1_48)
ACGAACACAATCAACCACCAACATAACCAAACCCTCTCCACTCCCAAAAC
TCGTTTACAGCCACAGCAAGTCAAACAACTTCCGCAGCTTCGTCATGAAA
TCCTCCATCGTGGGTCTTGCTTTCACCACCCTCTTGGCCGTTACAGCTGC
ACAGGAGACGATGACCGCCGTGCCCAACAAGAACAGCATCGACAAGCAGA
GCACTGCTGCTGCCGAATACGTGGCTCGGTCGCCCTCCCTGAAAGGAAGC
CGCCGCAAACTCGAAGAGCCTTTCACTCTACCTGGCCCGATCCCCGTCTC
GTTCAGCTTCGACTACGACGACTACTTCGACGATGA back to top
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