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Homology
BLAST of mRNA_P-littoralis_Contig119.58.1 vs. uniprot
Match: D7FY13_ECTSI (Ring finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY13_ECTSI) HSP 1 Score: 270 bits (691), Expect = 1.180e-84 Identity = 153/213 (71.83%), Postives = 173/213 (81.22%), Query Frame = 2
Query: 794 AAPAEAAEAAPESASAYTPAKASPAXXXXXXXXXTAEDEEAQSLALARQLLEEEAMASYAAAVDVFRSSAXXXXXXGDGSGGIEGVAAEDLAAMQALMEEDENSPDAFALAEDESLDYDGMLELGAAIGDVRKDRWRMRCMSVIAALPRVSYSARDNAGGGDTKCLVCLSEYEEGEELRKMPCSHVFHTACVDGWLEENEECPTCRTSVSPQA 1432
A+PA + EA+ E+++A A P+ D EA+SLALARQL+EEEAMASYAAAVD FRS+AXXXXXX GG+EGVA ED+AAMQALMEEDEN+PDAFA+AEDESLDYDGMLELG+AIGDVRKDRWRMRC SVIAALPRVSY+A +GG DTKCLVC +YEE +ELR +PCSH FHT CVDGWLEENEECPTCR SVSPQA
Sbjct: 4 ASPAASGEASAEASAATVEGTAVPSVG----------DAEAESLALARQLMEEEAMASYAAAVDNFRSAAXXXXXX---XGGMEGVAPEDMAAMQALMEEDENNPDAFAMAEDESLDYDGMLELGSAIGDVRKDRWRMRCKSVIAALPRVSYTAGGYSGGEDTKCLVCQCDYEEDDELRILPCSHTFHTECVDGWLEENEECPTCRRSVSPQA 203
BLAST of mRNA_P-littoralis_Contig119.58.1 vs. uniprot
Match: A0A6H5KY69_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY69_9PHAE) HSP 1 Score: 224 bits (570), Expect = 1.340e-63 Identity = 125/199 (62.81%), Postives = 145/199 (72.86%), Query Frame = 2
Query: 905 DEEAQSLALARQLLEEEAMASYAAAVDVFRSSAXXXXXXGDGSGGIEGVAAEDLAAMQALMEEDENSPDAFALAEDESLDYDGMLELGAAIGDVRKDRWRMRCMSVIAALPRVSYSARDNAGGGDTKCLVCLSEYEEGEELRKMPCSHVFHTACVDGWLEENEECPTCRTSVSPQA*K*QEKCTAGPSYTDCTKESISR 1501
D EA+SLALARQL+EEEAMASYAAAVD FRS+A G GG++GVA ED+AAMQALMEEDEN+PDAFA+AEDESLDYDGMLELG+AIGDVRKDRWRMRC SVIAALP+VSY+A +GG DTKCLVC +YEE +ELR +PCSH FHT V G + E ++ A CTAG + +SR
Sbjct: 201 DTEAESLALARQLMEEEAMASYAAAVDNFRSAAAAARAAG---GGLDGVAPEDMAAMQALMEEDENNPDAFAMAEDESLDYDGMLELGSAIGDVRKDRWRMRCKSVIAALPQVSYTAGGYSGGEDTKCLVCQCDYEEDDELRILPCSHAFHTGIVRGRVVGGERGVPHVPTLGFAADVKNPPCTAGFVREESQNTRVSR 396
BLAST of mRNA_P-littoralis_Contig119.58.1 vs. uniprot
Match: B7GAT0_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GAT0_PHATC) HSP 1 Score: 126 bits (317), Expect = 1.220e-29 Identity = 73/175 (41.71%), Postives = 96/175 (54.86%), Query Frame = 2
Query: 908 EEAQSLALARQLLEEEAMASYAAAVDVFRSSAXXXXXXGDGSGGIEGVAAEDLAAMQALMEEDENSPDAFALAEDESLDYDGMLELGAAIGDVRKDRWRMRCMSVIAALPRVSYSARDNAGG----GDTKCLVCLSEYEEGEELRKMPCSHVFHTACVDGWLEENEECPTCRTSV 1420
EE +SL LAR L+ EEAMA Y + + R SA ++ ED AMQ L+ E+E A ++ L Y+ MLE+G IGDV+ +RW + I LP V Y + N G ++KCLVC SEYEE E LR++PC H FH +CVD WL + CP CRT +
Sbjct: 68 EEQESLELARMLMAEEAMAVYENSFQLLRESADQ-------------LSQEDYQAMQELLREEEREQVAELEDDEGELSYETMLEIGERIGDVKTERWTLDAQRHIHKLPTVVYRS-SNVGADVDDSESKCLVCQSEYEEEERLRRLPCGHSFHASCVDQWLNTKDVCPYCRTCI 228
BLAST of mRNA_P-littoralis_Contig119.58.1 vs. uniprot
Match: A0A7S1YU58_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YU58_9STRA) HSP 1 Score: 122 bits (307), Expect = 1.110e-27 Identity = 65/169 (38.46%), Postives = 92/169 (54.44%), Query Frame = 2
Query: 929 LARQLLEEEAMASYAAAVDVFRSSAXXXXXXGDGSGGIEGVAAEDLAAMQALMEEDENSPDAFALAEDESLDYDGMLELGAAIGDVRKDRWRMRCMSVIAALPRVSYSARDNA-----GGGDTKCLVCLSEYEEGEELRKMPCSHVFHTACVDGWLEENEECPTCRTSV 1420
LARQ++ EEAMASY + + R A + ++EDLAA+QA M E+++ + F L YD +L LG +GDV+++RW M I+ LP +S + A + KCLVC YEEG+ LR++PC H FH CVD WL + CP CR ++
Sbjct: 135 LARQMMAEEAMASYNMSANFLRDHA-------------DNYSSEDLAALQAAMAEEDSEEEEFDEGPSAELSYDTLLRLGERLGDVKQERWAMVAKEQISKLPTFKFSTCEEATLKDRDDSEVKCLVCQCPYEEGDLLRRLPCKHCFHAECVDQWLMNKDVCPYCRQAI 290
BLAST of mRNA_P-littoralis_Contig119.58.1 vs. uniprot
Match: A0A836C9F1_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9F1_9STRA) HSP 1 Score: 119 bits (297), Expect = 5.540e-27 Identity = 65/165 (39.39%), Postives = 89/165 (53.94%), Query Frame = 2
Query: 965 SYAAAVDVFRSSAXXXXXXGDGSGGI-EGVAAEDLAAMQALMEEDENSPDAFALAEDES------LDYDGMLELGAAIGDVRKDRWRMRCMSVIAALPRVSYSARDNAGGG------DTKCLVCLSEYEEGEELRKMPCSHVFHTACVDGWLEENEECPTCRTSV 1420
SY A +D R++ G GG EG+ D+ AM+ M E++ E+E ++YD +LELG AIGDV+++RWR+R + IA LPR +AR D KCLVC+ EYE GEEL +PC H +H +CV WL + CP C+ SV
Sbjct: 67 SYQAGMDALRAA--------QGMGGWDEGMGEADIRAMRLAMGEEQEDDGGMGEGEEEEGDEETPMEYDALLELGEAIGDVKQERWRLRAPAAIARLPRKRAAARSPGAAAAAACITDAKCLVCMCEYEAGEELMALPCGHDYHASCVAAWLARADACPLCKRSV 223
BLAST of mRNA_P-littoralis_Contig119.58.1 vs. uniprot
Match: A0A7S0GIG7_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GIG7_9STRA) HSP 1 Score: 118 bits (295), Expect = 5.610e-27 Identity = 69/180 (38.33%), Postives = 100/180 (55.56%), Query Frame = 2
Query: 908 EEAQSLALARQLLEEEAMASYAAAVDVFRSSAXXXXXXGDGSGGIEGVAAEDLAAMQALMEEDE---NSPDAFALAEDESLDYDGMLELGAAIGDVRKDRWRMRCMSVIAALPRVSYSARDN----AGGGDTKCLVCLSEYEEGEELRKMPCSHVFHTACVDGWLEENEECPTCRTSVSP 1426
E +S ALAR L+ EEA+ASY+ + F+ +A + ++EDLAA+QA +EEDE N + A + L YD +L LG IGDV+++RW +I + ++ D + D KCL+C YE+ + LR +PC H FHT CVD WL++ + CP CR SV+P
Sbjct: 35 ENEESEALARLLMAEEAVASYSMSSTFFQDNA-------------DNYSSEDLAALQAALEEDEFDENEIEEDADVDTSDLSYDALLMLGERIGDVKQERWTHIANGIIDKMRVSTFCKSDTDEETSHDCDEKCLICQFPYEDNDTLRHLPCKHTFHTDCVDKWLQKKDFCPYCRQSVAP 201
BLAST of mRNA_P-littoralis_Contig119.58.1 vs. uniprot
Match: A0A7S4A8X8_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4A8X8_9STRA) HSP 1 Score: 114 bits (285), Expect = 6.320e-25 Identity = 71/187 (37.97%), Postives = 101/187 (54.01%), Query Frame = 2
Query: 908 EEAQSLALARQLLEEEAMASYAAAVDVFRSSAXXXXXXGDGSGGIEGVAAEDLAAMQALMEEDENSPDAFALAE-DESLD-------YDGMLELGAAIGDVRKDRWRMRCMSVIAALPRV-----SYSARDNAGGGDTKCLVCLSEYEEGEELRKMPCSHVFHTACVDGWLEENEECPTCRTSVSPQ 1429
EE +SL LAR ++ EEAMASYA ++D ++ + EDLAA++ M E+++ + A+ +E++D Y+ ML LG IGDV+ +RW I LP + S S + +A D KCLVC EY +GE LRK+PC H FH CVD WL + CP CRT++ +
Sbjct: 92 EEQESLELARAMMAEEAMASYAQSLDYLHNNQDH-------------FSEEDLAALRVAMGEEQHQYELDINADAEEAIDGEDNGDAYEFMLRLGEQIGDVKSERWAQVAQQRIDTLPILVFDPESSSNKKDANDCDIKCLVCQEEYCKGEHLRKLPCGHCFHKECVDQWLLSKDFCPYCRTTLDKE 265
BLAST of mRNA_P-littoralis_Contig119.58.1 vs. uniprot
Match: A0A1Z5KIZ8_FISSO (RING-type domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KIZ8_FISSO) HSP 1 Score: 109 bits (273), Expect = 1.210e-23 Identity = 68/185 (36.76%), Postives = 96/185 (51.89%), Query Frame = 2
Query: 905 DEEAQSLALARQLLEEEAMASYAAAVDVFRSSAXXXXXXGDGSGGIEGVAAEDLAAMQALMEEDENS----PDAFALAEDESLDYDGMLELGAAIGDVRKDRWRMRCMSVIAALPRVSYSA---------RDNAGGGDTKCLVCLSEYEEGEELRKMPCSHVFHTACVDGWLEENEECPTCRTSV 1420
D E +S+ALARQL+ EEAMASY ++ + + A + ED A+QA M ED++ D E + Y+ +L+L IGDV+ +RW R IA LP +S+ RD++ + KCLVC EYE GE+L ++PC H FH CV WL + + CP CR +
Sbjct: 58 DAEEESIALARQLMAEEAMASYQSSFQLLQQHATQ-------------FSPEDYQALQAAMMEDDDQLAQLNDEVDEDEGDGSAYETLLDLSERIGDVKAERWSWRAPHEIAKLPSFVFSSVATPSAVTTRDDS---ECKCLVCQCEYENGEQLCRLPCQHTFHMDCVQPWLMKKDVCPYCRQCI 226
BLAST of mRNA_P-littoralis_Contig119.58.1 vs. uniprot
Match: K0RAC2_THAOC (RING-type domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RAC2_THAOC) HSP 1 Score: 102 bits (255), Expect = 5.230e-20 Identity = 53/131 (40.46%), Postives = 72/131 (54.96%), Query Frame = 2
Query: 1061 DLAAMQALMEEDENSPDAFALAED------ESLDYDGMLELGAAIGDVRKDRWRMRCMSVIAALPRVSYSARDNAGGGD-----TKCLVCLSEYEEGEELRKMPCSHVFHTACVDGWLEENEECPTCRTSV 1420
DLAA+QA + E+ +A D + YD +L LG IGDV+++RWR+ I LP V + R+ A G + KC VC +YEEG+ELR +PC H FH AC+D WL + C CR S+
Sbjct: 251 DLAAIQAALAEETEDAGGDEVAADGEGGESNEMSYDALLRLGENIGDVKEERWRLVSKEKIEKLPTVKF-LREMAEGKEENHTLVKCQVCQFKYEEGDELRALPCGHYFHAACIDEWLTNKDTCALCRKSI 380
BLAST of mRNA_P-littoralis_Contig119.58.1 vs. uniprot
Match: A0A024GLD1_9STRA (RING-type domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GLD1_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 2.660e-17 Identity = 38/96 (39.58%), Postives = 58/96 (60.42%), Query Frame = 2
Query: 1133 ESLDYDGMLELGAAIGDVRKDRWRMRCMSVIAALPRVSYSARDNAGGGDTKCLVCLSEYEEGEELRKMPCSHVFHTACVDGWLEENEECPTCRTSV 1420
+++ Y+ +LELG +GDV+KDRWR S +A LP S R G + C++C +E + +PC+H+FH++CV GWL EN CP C+ +
Sbjct: 225 DAMTYEELLELGERVGDVKKDRWRQIAPSRVARLP----SCRWKQYMGYSSCIICQHNFEPNDHALTLPCTHIFHSSCVQGWLLENSACPLCKVEI 316
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Stop | 1 |
| Start | 1 |
| Seed ortholog | 2880.D7FY13 |
| Preferred name | RLIM |
| PFAMs | PA,zf-RING_2 |
| Model size | 1662 |
| Max annot lvl | 2759|Eukaryota |
| KEGG ko | ko:K15701,ko:K16271 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000122,GO:0003674,GO:0003824,GO:0004842,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006355,GO:0006357,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0007549,GO:0008150,GO:0008152,GO:0009048,GO:0009056,GO:0009057,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010498,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016567,GO:0016740,GO:0019219,GO:0019222,GO:0019538,GO:0019787,GO:0019941,GO:0030163,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031974,GO:0031981,GO:0032446,GO:0036211,GO:0040029,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043433,GO:0043632,GO:0044092,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051090,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051603,GO:0060255,GO:0060816,GO:0061630,GO:0061659,GO:0065007,GO:0065009,GO:0070013,GO:0070647,GO:0071704,GO:0080090,GO:0140096,GO:1900095,GO:1901564,GO:1901565,GO:1901575,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 |
| Exons | 8 |
| Evalue | 1.85e-87 |
| EggNOG OGs | KOG4628@1|root,KOG4628@2759|Eukaryota |
| Ec32 ortholog description | Zinc finger, RING-type |
| Ec32 ortholog | Ec-08_004670.1 |
| EC | 2.3.2.27 |
| Description | protein modification by small protein conjugation or removal |
| Cds size | 1188 |
| COG category | O |
| BRITE | ko00000,ko01000,ko04121 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680789500.276065-UTR-P-littoralis_Contig119:346740..346987 | 1680789500.276065-UTR-P-littoralis_Contig119:346740..346987 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig119 346741..346987 + |
| 1680789500.3850904-UTR-P-littoralis_Contig119:356522..356749 | 1680789500.3850904-UTR-P-littoralis_Contig119:356522..356749 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig119 356523..356749 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680789500.2861989-CDS-P-littoralis_Contig119:346987..347080 | 1680789500.2861989-CDS-P-littoralis_Contig119:346987..347080 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig119 346988..347080 + |
| 1680789500.2977185-CDS-P-littoralis_Contig119:349217..349344 | 1680789500.2977185-CDS-P-littoralis_Contig119:349217..349344 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig119 349218..349344 + |
| 1680789500.308876-CDS-P-littoralis_Contig119:349808..350296 | 1680789500.308876-CDS-P-littoralis_Contig119:349808..350296 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig119 349809..350296 + |
| 1680789500.320597-CDS-P-littoralis_Contig119:351483..351678 | 1680789500.320597-CDS-P-littoralis_Contig119:351483..351678 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig119 351484..351678 + |
| 1680789500.3326056-CDS-P-littoralis_Contig119:353021..353080 | 1680789500.3326056-CDS-P-littoralis_Contig119:353021..353080 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig119 353022..353080 + |
| 1680789500.3411098-CDS-P-littoralis_Contig119:355045..355120 | 1680789500.3411098-CDS-P-littoralis_Contig119:355045..355120 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig119 355046..355120 + |
| 1680789500.3548563-CDS-P-littoralis_Contig119:355697..355774 | 1680789500.3548563-CDS-P-littoralis_Contig119:355697..355774 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig119 355698..355774 + |
| 1680789500.3703465-CDS-P-littoralis_Contig119:356448..356522 | 1680789500.3703465-CDS-P-littoralis_Contig119:356448..356522 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig119 356449..356522 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig119.58.1 >prot_P-littoralis_Contig119.58.1 ID=prot_P-littoralis_Contig119.58.1|Name=mRNA_P-littoralis_Contig119.58.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=396bp
METLAANPATTVRPSSLALAESQNIQQNDQQVAGAGVPAAKSVVVKASSG SSPAAATAPSAAAAAPGPSASKPPPSRSGSGGGGGGGGGGRGAVPPATPA AATAAAAETPAAAAAAAAAAAATVAAAAFATPATFAAFTTPAAPARTAAA AAAAFSSTGGGRGGAAAATDRMNLATPTVPVPAAPAEAAEAAPESASAYT PAKASPAASPAASPAATAEDEEAQSLALARQLLEEEAMASYAAAVDVFRS SAAAAAAAGDGSGGIEGVAAEDLAAMQALMEEDENSPDAFALAEDESLDY DGMLELGAAIGDVRKDRWRMRCMSVIAALPRVSYSARDNAGGGDTKCLVC LSEYEEGEELRKMPCSHVFHTACVDGWLEENEECPTCRTSVSPQA* back to topmRNA from alignment at P-littoralis_Contig119:346741..356749+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig119.58.1 ID=mRNA_P-littoralis_Contig119.58.1|Name=mRNA_P-littoralis_Contig119.58.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=10009bp|location=Sequence derived from alignment at P-littoralis_Contig119:346741..356749+ (Pylaiella littoralis U1_48) GATATCATCTCCATCTGTGTGCTCTACACCCGTCCTTACCGTCGGCCTCT
GTCATCGAGCTGCTGCTTCTGCTTCCTCTTCCGCTGCCATAGCAAGACGT
ATCCGCCCTCCCCGTCGAATCGGTGGTCCTTTGTGAAAGAGGGCATATCA
CTCATACCTTCGGCATTGGTTTCGAGAGGCCGAGCCTTTTTTTTCACCAA
CGGCTTTTTTCTCAAGAAGAAGCGAACCTCGGGAGACGGGAGAGAAGATG
GAGACGCTCGCGGCCAACCCCGCCACCACCGTACGCCCGAGCTCGCTCGC
TCTCGCTGAGTCGCAGAACATCCAGCAGAATGATCAGCAGGTGAAGGAAA
CGCTTATAACCATTAGACGTCCAGCGGTTACGTGCTGCCTCGAGCGTGCG
CCTGTAAATACACCTGGTACGTCGTACCAGGTTTAGGGCTCGCACCCGAC
TTGCTCCTACCCGGGTACCCGACGAAATCGAGTAGCCCCACCGGGTACAG
TGTACAAGTGCAGTAGTGTTTACAGTACAAGTACAAATGATATCATATCA
TATGTGTTGTTGTTGTTGTCGTTGTTGTTGATTCTCACATTAGCTCACTA
CCGCCCCAGTTTAGCCCGTGGTCACAAACCAGGCACATATCGTGCTAGGA
GGAAAAAAATAAAAATAAAATATGGACTATGGTCACCGACAGTCAAGTCA
GATAGGGTACCGTTGGGGAACCATCTGTGGTGGGCAAAGTACCAAACAAA
ATACAGAAAAAAATAACAGGTTCGAAAGAAAAAACAAAAATTGGAAACAG
TCCGACAAACAAAAATCCAAGACAAACCTCAACCATAACCACATACTTCG
AAGTACTTCGTACATCGAACCAGGGTCCAGGGCCATGACAGACCAAGGCA
AAGGCAAACCAGGGGGCATGGTCCAGTAACTACATGATCAAGAGACGAAA
GACAAAAAAAATAAAAAAGAAGAAGATACAGGGAGGGCACAAAGACTGAG
GAAGTGCACTCGTGCACAAACACGACAAACAGGCCGCCAAACAAAGAGGA
AGCAGGGGAACGAAAAGGGAAAATAAAAAAAGAGGCGAAGAGGAACAAAA
TACATAAGTGCAGAGGGAAGACCGGAAGACCGGAAGTACCGGAAGTCGGG
GGGGGGGTGATAAAAAATAAAATAAAAGGCATGCAATCAATCGCAAACAT
GTCTTGCCACGAGGTTTGCCTGTTCACGCTTGCTCTCCTCAGTCGCACTC
ATGCCTCCTGCTACTGGCACCACCGTAACCAGTTGTTTCTGCCCCACATC
TCTGGCAGCTACACAACCGCTCCGAGATTTCCGCCCTACAGGTTTTCCAC
TCCGGCCACCCCGTAGCTTGGCTTTGAGCTGCTTCTTCTGCCGCGCAACT
CCAACCCCACTACCCCGCTGCCCTTGTGCCCCCCCGTACTCCTCCTCTCG
TTTATCCCCGCCATCCGTTCTCCCTCTTTTGGCCAAGGCCTGCCCCTCAG
CCGCGTCCCTCTCCCTTTTCAGTCGACGTGTCTCTGATAAGTCTCCCTCT
TTCTTGAGCCACTCGTCCGTGAACCGCCGCGCACCCTCGTCGATCCTGTC
GTACCACTCGTCAGCTCTCTTGGCACTTGCCTCCCACCCCTCTTTTTTGT
CGATAGCGATGTCGAACGCTTCGAGGTCCTCCTGCGTTCGCCTCAGCCAG
TCAAACTCTTGCCCCCCCAGATACCTCGCTCCCCCCTGCAATTCTCCCAA
AAGAGCAATTTTCGGGAGTCTCTCGTCTCTCATGCGCGCAACGAATCCTA
CGAAGCTTATGTATCATGCAGCAGTGTGTGCTGTGTGTGTTGTCTTCCAT
TCCGATGTCTTTCATTCGTGGTCCATGTGATATACTTTCACTACTACTGC
TGTAGGGCAGTGATAAGGTCAGCGCACGAGCCACCAACAAAACAACCCCA
AACAACACAGAATCCCCCCGGGTTCGACTGCATGTTGCCGCGAAAATCCT
CCTCTGTTTTGTAAGCTTTGCGATAAGAATATTTGGTTTGAGGGAGAACA
AACAATGATCGCAATAAACACGAAGCAGTTTCGGGTATAAAGCAGGACAA
ACAAGAAGTCATAACCAATGCTTTTCGCACGAAGTTTTTGCTTTTGAGGG
AGGGTAAACAATGACCACAATTTATACCAGGTATCAGGTACGAAATAGCT
TTTGGTATGATAAGCGGCAGGTCAAACCAGCGGTATTCTTGTCTCACACC
GACTCCGTGATGATGCCGCCGCACAGGTGCTAGTGGTTCCTCATTTACTG
CACGCTGCGGTTGATGATAGCACGCATGCCCCTCACGCCCCCCCCCCCTC
CCTTCCTCCCCGCTGCCTCCCCTCGCTGCGTTGCCACCCGTTAATGCTGA
AATTCCGCTTCTTGGTCCCGCTATGAATGCTCTTGCTATGTTTGGGGCTG
GCTGTATGCATTTGCTCGAGAGAACAGGTTGCTGGCGCAGGAGTGCCAGC
GGCCAAGAGCGTGGTGGTGAAGGCTAGCTCCGGCTCTTCTCCCGCTGCTG
CCACAGCCCCCTCTGCCGCTGCAGCTGCTCCTGGCCCCTCTGCTTCGAAA
CCCCGTGCCGGCGAAGGGCTGGCGGCGAAGGGAGGTACCGGTACATCCTG
CTGCTGTACCATGCTGTGCTCGAAGAAGGTTTTTCCCCATGGCGGTTGTT
TTTCTTTTTCTTTTACTGCTGTTCATCGGACATGCATCCTGACGCGAAAT
TTTACGTCAGGACGGCAAGAGTGATTATTTGCCTCCGGGGTCCGAAGCAC
CGTGATCTCAGGGTACGCTCCGAACCTCCACTGTTCCGGGCGTTATTTTG
TTATTTTTGGTTGCACGTACGATACGAAGCAGCAGTTTGACATCCCAACG
ACCAACGGGCAGCAACTTTAGATGTGCCGGTTGGTTGTAAGACTCCTCTC
TCACCGCGCCCGCCGTGGTGCCTTTCCCCCGTCTGCGCCGTCACGAATGG
TACCTACTGGTGTCCGGACCACATCATCACTGCTGCAGTGGGAAAGTCGT
CCAAAGAGGGGCGACGAGCACCCAGCCGCAGCGGCAGCGGTGGCGGCGGC
GGCGGCGGCGGCGGCGGCCGCGGAGCAGTACCACCAGCAACACCGGCAGC
AGCGACAGCAGCAGCAGCGGAAACACCGGCGGCAGCAGCAGCAGCAGCAG
CAGCAGCAGCAGCAACAGTAGCAGCGGCAGCGTTCGCGACGCCGGCGACA
TTTGCAGCTTTCACTACACCAGCCGCGCCAGCCAGGACAGCAGCAGCAGC
AGCAGCAGCGTTCTCGTCGACGGGAGGAGGAAGAGGAGGAGCAGCAGCAG
CAACGGACAGGATGAACCTCGCCACTCCCACGGTGCCGGTGCCGGCGGCT
CCAGCGGAGGCTGCGGAGGCTGCTCCTGAGTCGGCAAGCGCTTACACGCC
TGCAAAGGCTTCGCCTGCGGCCTCTCCTGCGGCCTCTCCTGCTGCGACTG
CCGAGGACGAAGAAGCGCAGTCCCTTGCTTTGGCGAGGCAGCTTCTAGAG
GAGGAGGTGAGCGAAGTAGCCAACGCGCGGCAAACGAGCTGATCGACCAG
TCTCTGTCATACGCATTAGATAAAATAGAAGTATCAGGTTGTCGACAGTG
TCGTTCATTATTTTCATTGACGACAGCAGTAATGAAAGGAGATGACACCG
TTGGTCGGGGATGCTTTCCACGCTCAGTACGATGACGCGGGTGCTTGCAC
CATCACCAGCTACCGTCCAAGGGAAACGACACCAATACAAAACACGCACG
GAAGACGATGTCATCGGGAACGGGCCCGAGCGACGACCACCTGCCATTGT
AACGAAACCACGCGAACACGAACATACACGCACACGAAGAAAAAATAGAA
AGGCGATGGCATGGTTTGGATGCCCTAAGCTTGACCACTTGCCTTCCTAA
CTTGACACCGCAAACACAGAACACGATCAAGGCCGACCAAAGCGATGGCG
TCGCATGTACGCTGCCTCTATCCATGACCACTTGTCAATCTATTGCAACA
ACGCGGACATCAACACCAACACATGATATTAATATTGACACGAAAAAAGG
CGATGGCATCGCGTGTGTGTATGCTTCAACCATGCCGCCAACCATGACTA
CTTGTCACCCCATCGCAACGACGCAAACGTCAACATCAACACAAACACCA
TCGCATGTATGCCCTCACCGCCTCCCACCGCTCTAACAAAAAAAAAAACA
CAACACCGACGCCAAAGAAAGGAATCCACCCCCCCCCCCCCCCCACCGCG
ACCACCTGCCAAAATCCAACAAACATCCAAAACATCGACACTGCTGTTTG
ACGTACGAATCATACATGGTATTTGTACGATCTACGGGGTCTCTGGGGTA
TGCGATGTTTGTTGTGAGGGATAGACGGGGCCCCGCTGCTTCTGTCCCTC
GTCGTTCGCTCGCCCTCGCCTCGCCATCATATGCACCCCTGTTTCTGAGT
CGAGAAACGCATTCCTCGTCTAGGCGGCGTCCGCGTGATCAAATGTGTTC
ACGTGTCGAGCCGGGGCTGGCCGAACAGACGGGGCACCAACGCGGAACAC
GCAAAAGGGAAGCTTGATTGCACGCCCCATCACCGCCACCGCCGTGTCAT
CTATCGAAAAGACCAACACTGACACCAACACTGACACCAACAAGTCCGAC
ACCAACAACACCAACACTAATACTATCAATTATCAAATGACAGGCGATGG
CATCTTATGCGGCGGCGGTGGACGTCTTCCGCAGCTCGGCGGCGGCGGCG
GCGGCAGCGGGGGACGGCAGCGGCGGCATCGAGGGCGTTGCGGCGGAAGA
TTTGGCGGCGATGCAGGCCTTGATGGAAGAAGACGAGAACAGCCCGGACG
CGTTCGCTCTGGCCGAGGACGAGTCGCTAGACTACGATGTACGTCTCCTC
GGCCGTAATACGTATTTCGCTTCGGCGTGTAATACGACGGTCACTCCAGT
AGCCGCCACGGCGGTTGCTTCTCGTGCTTTCTCTACACTCTCACTATTTG
AGATACTTATTAAAGTTTTCGAGAGCATGGGGACGCCGCCCTGAGTGACG
TCACCGGTCGACCAGGGATTTTAAACTATTCAGAAATTTGAAATTTGAAA
TTTGCTTTCAAAAAATAATTTTCCTCTTAAAAAAAAAAATGACCAATCAG
AAATCCCCTTTCAAAAAAATTGACCAATCAGAAACCTGCGGTCACCCTTT
CTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTGC
TGGTCTTACAGTAGAGCAGCGACAATCTCGTGCTGGTGGTAGGTAGTGCA
GGGGGGGATCGTGACGCGTCAGGCGGCGATTACCCCGAGAGCCTCGACTT
CCGTCATCCGCATCTCTGCTCTTGAGCGTGTGTGTTGTTTATTTTTTTTG
TATTTTGTGCGGTTTCTGTTCTGGATATGATACGATAACCATATGCAAGG
ACTGATCTCCGCACGGTCCTCGGATTCTTCACGAGCAATTGTATATACTT
CGGATATAAAACTCCGGCCTAATCAGTGGTTTGCACACGCCGACACTTTA
TTTCGCTGTACTTGTTTATTAGGCCAAGAACGACTCGGTCGCATGTGCAG
ACTTTGCATGATGTGTGTCTCAGCTCTCTTGGATTGTGTGCCTTCCGTAT
GATGGGTCGCGGCAAGATGCCACGGAACCCCTCCGAACGAAGTTTCAAAG
CGCGATAAAGGGGTGTTACGGTACTGTATCATATTGTTCGCCGATAAAGG
TTCAACAAACGCCGCAACAAAGGCGGTGTGCCAACTTTTTCGACGAGATG
GTTGATTCCAGAATATTAACGCCTCTTTTTATTTTCTGAAAGCTCTCCCT
CTCTCAACGAGATGGCTTCATCATTCCAAGCCGATCACCTTCATTGATGC
AGCACCGCCATTCTTTCTGTAATCGATTCCCCCCTCTTCACTCTTTACCT
TTGTATGATATTTAACTCCTTTTTTTCTGTCTTCTGTGTTGTGCTCTGTT
TCTGTATTTCCACAGTTTTCATTTCTTTGTTTTTCTAGTTTCTGTTTTCT
TTCTGTTTTCTTTTTTCTCTTTTCTCTTCCCGATACTTTTTTTTCGATTT
CTGTTTGTGATTTTTTTTTTTTTGGCTGTTTGGCTGCTTTAAATTTTCTG
TTTCTCCCCCCCGACCTACCCACCCACCCACCCAACCAAGTCACGTACCC
TACCAACCACTCCTATTTCCGTTCTCGACAGGGAATGCTGGAGCTCGGGG
CAGCCATCGGTGACGTTCGGAAGGACAGATGGAGGATGAGGTGCGTGCAG
TACCGCTACAGCAGTAGGTGGGCACCGTATCAGCCGGCAGCGACTGACTG
GCAGCAGGAAGCTGCAGCTGCTGTTGTTGTCGATGATGTTGGTGGGGGTG
GTAGTGGTAGAGGAGGCGGTGTGTGTCTGTGTCTGTGTCAGTCTGTGTGT
TGTCTCCCGTCTGTTTCGGGCGTGCGGGAAGGCATCACCCGGGGTCACTC
AGGAGGAGGAAGGTTGAAGAGAAGCTTGTTGTTGTTGTTGTTGTTGTTGT
TGTGTGGCGTTGTACTCTTTTGAGCATACAGCGAAATCAAATCATGAGAG
TCTGACCTGTTGCTACATGAGATCATCGGCAGCAACCGACCAACTAGCGG
CAGGAAGTTCGCTGTTTTTTGGGACGATTCGACGCAAAACGTTGCGAAAT
GATACTTCGTAGAAGAGAGTCGAGCTGCTCTATTTTCAGCACTTAAGGCC
ATCCGTGCGCAGCAAGCAGCATTGTGAGGACGTACATAGACCCCATCTAA
GATAAAAACAAGGTTGGAGCTGCTGCACCGCGACGCTAGAAAGGGGTGCA
GTATTGTTTTTCAGACCCGTGGTGGCACAGCAGAGCAAGGATCACTCTTG
ATGGACTGTTCTTCTCTGTCGCTACAGCAGAACCAGGTAGATGCTTTCAC
TTTAGTAGAATATAGTAGCCCTTTCTGAGGGAGCCCCGTGATCCGAGTCA
GTGGCAATAGACACCAAAGGTATTAGCCCCATATGCCGGGACGCCACGAT
CGGAGCCTGTGGCGAAACAGAGGAACCCACAGACTACAACAATTTACAGG
CATGATGCCTGAAAATTGTTGTTGTGTTGCTTCCTCTCTTTCGCCACACA
TGTCTGTAAATTGTTGTAGTCAGTGGCTTCCTCTGTTTCGCCACAGGCTC
CGATCGTGGCGTCCCCTCAGGTAGGGCTATTGTTTGGTTCGTGTTGATAA
TTGTCCTGATTGCATTTTGCTTTCTGTTGCCTCAGGCTCGGATCACGGCA
TCCCCGCAGAAAGGGCTATATGACTTTCTATTTTCTACTGAAGTTAGAGC
ATCTACCTGGTTCTGCTGTGGTGACAAGAGTGTGATATCATGGTCCCGGA
ACAGCAGTAGTTCGCCAAAAGTTATAGAAAGCAGACAGCAGCAGTAGGGG
TGAAGCACCAGGATGGGGGGGGGGGGGGGGGGGTTCTTGTTTGTCGGCCC
CGAAGTTGGGTGGACTGTTGTCTTTTCAGACCATCGATGATGATGGGGCC
TGGGGCCTGGACCCCGGCACTACTGTTGAGATGCCGCCGACTCAGCACCG
GGCGGTGTCTGTCAAGGGCTGCAGCAGGGCACTGAGGCATCCAGCCTGCA
AGGGAATTAGGTTCAATCACTTTCCGCCGGCAAGAAGCGCGAAGTTATCA
GCAGTAGGGAAAAAGTATTGAAAGCAGTGTAACTCTGTGGGTGTGATGTG
GTGTGGTCTGGCGCTTCTCGCCTTGCTGCGCTGAATGAAGGGGACCAGAG
GGCGGGGGCAGCTTGGGTCACTGCCGTTGTTTGTTGCTCTTAGCGACCGG
ATCTGGTGATCCGGTGATAAATACAGGCATACACGACGATTTTGTTTGGT
CGTCCTGGACAGGGCACAAACCCGAGCAAGAGGCACGGGCACCCAACGCA
TGAGAGTAGTACCATCTGGGTCCTTTGTCTCCCCTCCCCAAAGCCGTATT
TCTATTTTCATCAAACGAGCAGTGCCCGCGCTGCCCTCCCCCCCCTACCC
CCACTCGCCGCAAAAGTCGCTTTTTTTTATTTTTATCCCACTAGCAGTTT
AAGTGCCTGCGCTTGCTTGCCCCCCCCCCCCTCGCCGCAACCCGCTGATA
AGCCGATTTTTTCCTTTTCCCGGCTATTGATTGCCCTTGCTTGCCCATTT
CTCTCCCGGCGGATGCTCCCAATTCTTGCCGTGACCGCCCTTGTGTGTGA
TACAGGTGTATGTCCGTGATCGCCGCTCTGCCGCGGGTTTCCTACAGCGC
ACGGGATAATGCCGGCGGGGGAGACACAAAGTGGGTCGTACACTAGGAGC
GCTGTTGGTGCCCATCAGAAAGTGGCGCCGCTATCATAAGTGCAATATCT
TCATCACTGCCTTTTCAAGTGTCGGTGTTGGGCTTCTCCTGCAAACGTGT
TTTTTTTTTTATGCTGTCTTTTTGAGTTGCTCCCAGCAGGCAGACACGTG
CTGCCGACACCATAAATTTCGCATTCGTCACGCGTGTGATACGGTAGGCC
CTCTGTTCTCTGTCTGCGCGTTTGATTCCGGGTTAGTATGTGCCGTGACA
TGCCCACACTTACCGGATGTGGTGGTCGTTCGATGTTTGTGCTTTGGATG
GAGTACACGCATATCACGCTCACGCATGTTTGGCCTTTGACCTATACCCC
ATTCCCTATATAGTATGCACGACGTGACTATATCGCGTACAGAATCTGTG
AGAGCTGCGTCTCGAGAAGGATGTGCGGCCAATGGTCAAGAATTACCGCG
GTAGACAGCAATAAACTAGTTCGCCCCGCCATAACCTCCCCCCCCCCCCG
CCACCTTTGACCCGACACGCCGGCCCCAACAACAATGTTCTCATGTTGTC
TATTTAGGTGCTTGGTGTGCCTGAGCGAGTACGAAGAGGGCGAAGAGCTC
AGGAAAATGCCGTGCTCCCACGTCTTCCACACAGGTGACTGATGACGCTG
TAACATGTCACGCATCTGTCTTTCTCTTTACTGTTCTATCTTTCTATCAA
TCTATTTATCTATCAATCTGTCTATCCATCTATCTATCCATCTATCTATC
CATCTATCCATCTATCGATCTATCGATCTATCTATCTATCTATCTATCTA
TGCCATCTTGGATTGTTGTTTGGTTGTAGATACGTCCATGTTTTGTACGT
CACGATAAAAAAGGCGTTTGGGGGACCGATATGTCTCCAAGATCTGATAT
CTACCGGTGCTTTTTCAGGTTGGCTGCCGAGCAGTAGGGTGTATGTTGTG
GATTTTGAGGCACACGGCCAACTTCTGCTTCTGTTTCCGTTCTTGCTGGA
GCCGACACAACAGGGGGTGAATATGATGTCACACATCAACAGAATATTCG
GTTTGAAAACTATTAATGCACAGGCGGGCTGGACTTACTAGGCAGGAGCT
CGTATTTCCTGTGTGAAGCCTGGTGTTGTCAGTGGCTCCATGTAGGAACT
GCTGGCTCTGTCTCGGAATGACCAGAGCAACCGAGAGATGACCCACGCCC
CCCCGGCCTTCCCTCCTCTTCCTGCCTCCTCCCGCCTCCCCCCCAACACC
CCCAACACCCCCGTCAATCCGCGCACCCCCTCCCTGAACGTGATCGGATG
ACTCCCAGCGTGCGTCGACGGGTGGTTGGAGGAGAACGAAGAGTGCCCCA
CGTGTCGAACATCAGTTTCGCCGCAAGCCTAGAAATGACAAGAAAAGTGC
ACCGCAGGCCCCAGCTATACTGACTGTACCAAGGAGTCAATCAGTCGTGG
AGATAGAATAGGGTACATTCTCAAGTACTATGGCCGCGACAAGCGCAGCC
TACTTCTTCTTCATCTTCTTCTTCTGTAGAATAATGCCGTACGTAGACTA
GCCGGCAAGAAGCCGGACTTGAAGAGAGACGAGTGATTGGATGGGTGGGT
GAATGGGTG back to topCoding sequence (CDS) from alignment at P-littoralis_Contig119:346741..356749+ >mRNA_P-littoralis_Contig119.58.1 ID=mRNA_P-littoralis_Contig119.58.1|Name=mRNA_P-littoralis_Contig119.58.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1188bp|location=Sequence derived from alignment at P-littoralis_Contig119:346741..356749+ (Pylaiella littoralis U1_48) ATGGAGACGCTCGCGGCCAACCCCGCCACCACCGTACGCCCGAGCTCGCT CGCTCTCGCTGAGTCGCAGAACATCCAGCAGAATGATCAGCAGGTTGCTG GCGCAGGAGTGCCAGCGGCCAAGAGCGTGGTGGTGAAGGCTAGCTCCGGC TCTTCTCCCGCTGCTGCCACAGCCCCCTCTGCCGCTGCAGCTGCTCCTGG CCCCTCTGCTTCGAAACCCCCACCCAGCCGCAGCGGCAGCGGTGGCGGCG GCGGCGGCGGCGGCGGCGGCCGCGGAGCAGTACCACCAGCAACACCGGCA GCAGCGACAGCAGCAGCAGCGGAAACACCGGCGGCAGCAGCAGCAGCAGC AGCAGCAGCAGCAGCAACAGTAGCAGCGGCAGCGTTCGCGACGCCGGCGA CATTTGCAGCTTTCACTACACCAGCCGCGCCAGCCAGGACAGCAGCAGCA GCAGCAGCAGCGTTCTCGTCGACGGGAGGAGGAAGAGGAGGAGCAGCAGC AGCAACGGACAGGATGAACCTCGCCACTCCCACGGTGCCGGTGCCGGCGG CTCCAGCGGAGGCTGCGGAGGCTGCTCCTGAGTCGGCAAGCGCTTACACG CCTGCAAAGGCTTCGCCTGCGGCCTCTCCTGCGGCCTCTCCTGCTGCGAC TGCCGAGGACGAAGAAGCGCAGTCCCTTGCTTTGGCGAGGCAGCTTCTAG AGGAGGAGGCGATGGCATCTTATGCGGCGGCGGTGGACGTCTTCCGCAGC TCGGCGGCGGCGGCGGCGGCAGCGGGGGACGGCAGCGGCGGCATCGAGGG CGTTGCGGCGGAAGATTTGGCGGCGATGCAGGCCTTGATGGAAGAAGACG AGAACAGCCCGGACGCGTTCGCTCTGGCCGAGGACGAGTCGCTAGACTAC GATGGAATGCTGGAGCTCGGGGCAGCCATCGGTGACGTTCGGAAGGACAG ATGGAGGATGAGGTGTATGTCCGTGATCGCCGCTCTGCCGCGGGTTTCCT ACAGCGCACGGGATAATGCCGGCGGGGGAGACACAAAGTGCTTGGTGTGC CTGAGCGAGTACGAAGAGGGCGAAGAGCTCAGGAAAATGCCGTGCTCCCA CGTCTTCCACACAGCGTGCGTCGACGGGTGGTTGGAGGAGAACGAAGAGT GCCCCACGTGTCGAACATCAGTTTCGCCGCAAGCCTAG back to top
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