mRNA_P-littoralis_Contig119.42.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig119.42.1 vs. uniprot
Match: D7FY21_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY21_ECTSI) HSP 1 Score: 439 bits (1130), Expect = 3.900e-148 Identity = 232/273 (84.98%), Postives = 254/273 (93.04%), Query Frame = 2
Query: 293 NMPQHKNDMLVVAAPRASMAEVERAGPAQLADSQRYWKIEKQEGDLTGQLGELEQGTRQRNREFEAKLRAIEERIRGLEAGIVREIEECEETHAEMFAGLEEKLKAASAFVEAEAEASITARFEPGLLEHVERVEADDARVEDFVHVTVPRVVDEQSGAVTRKLQKARETFDIENAKIAKRERKLVSRFGTHVKGTAQSFEDEKATRLGKLWLLGEDLEGVEHMDERGDEALQLSIVKAIKAMRGDVAATSEERGYQDGLLLDSLAHAQQRLQ 1111
+M HKND L+VAAPRASMAEVERAGPAQLADS+R+WKIEKQEGDLTGQLG+LEQGTRQRNREFEAKLRAI ERIRGLE GI RE++E EETHA MFAGL+EKLKAA+A VEA+AE SIT RFEPGL EH+ER+EAD+ARVE+FVHVTVPR+VDEQSGAVTRKLQKARETFDIENAKIAKRERKLVSRF THVKGTAQSFEDE+ATR+GKLWLLGEDL+ VEHMD+RGDE+LQLSIVK IKA RGDVA S+ERGYQDGLLLDSLAHAQ +LQ
Sbjct: 4 SMLGHKNDALMVAAPRASMAEVERAGPAQLADSKRFWKIEKQEGDLTGQLGDLEQGTRQRNREFEAKLRAIAERIRGLEVGIEREVQEREETHAVMFAGLQEKLKAAAATVEADAETSITDRFEPGLSEHMERIEADNARVEEFVHVTVPRIVDEQSGAVTRKLQKARETFDIENAKIAKRERKLVSRFETHVKGTAQSFEDEEATRVGKLWLLGEDLQAVEHMDDRGDESLQLSIVKTIKATRGDVATLSKERGYQDGLLLDSLAHAQHKLQ 276
BLAST of mRNA_P-littoralis_Contig119.42.1 vs. uniprot
Match: A0A835ZDQ8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDQ8_9STRA) HSP 1 Score: 245 bits (625), Expect = 6.740e-73 Identity = 139/266 (52.26%), Postives = 184/266 (69.17%), Query Frame = 2
Query: 314 DMLVVAAPRASMAEVERAGPAQLADSQRYWKIEKQEGDLTGQLGELEQGTRQRNREFEAKLRAIEERIRGLEAGIVREIEECEETHAEMFAGLEEKLKAASAFVEAEAEASITARFEPGLLEHVERVEADDARVEDFVHVTVPRVVDEQSGAVTRKLQKARETFDIENAKIAKRERKLVSRFGTHVKGTAQSFEDEKATRLGKLWLLGEDLEGVEHMDERGDEALQLSIVKAIKAMRGDVAATSEERGYQDGLLLDSLAHAQQRLQ 1111
+ + +++P A A V+R GP+++ S+RY K+++QE DLTGQL +LE+ TR+RNR FEAKL AIE+R R LE + E E E H + L+ KL A A +E + IT +F GL E ERVEA+ ARV+ F+ VT+P V++ QSGAVTRKLQKA ETFDIENAKI KRE+K++ RF HV+GTAQS EDEKA R + WLL ED+ E MD+RG+E + + + IK +R D+AAT ER +D LLLDS+ AQQ+LQ
Sbjct: 2 ETVTISSPGARTAVVQRVGPSEVPPSERYAKVDRQEDDLTGQLTQLEESTRERNRLFEAKLCAIEQRARHLEEKMSAETLERETAHKAIMTALQSKLATAVANIEEWVNSDITNKFADGLQEQEERVEANKARVDKFIKVTIPGVIEAQSGAVTRKLQKAHETFDIENAKIHKREQKIMKRFEVHVRGTAQSIEDEKAMRQSRHWLLEEDMIEAERMDDRGEEVVTVRTMLDIKEVREDIAATVSERQRKDCLLLDSMLEAQQKLQ 267
BLAST of mRNA_P-littoralis_Contig119.42.1 vs. uniprot
Match: A0A6U4EHM1_9STRA (Hypothetical protein n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4EHM1_9STRA) HSP 1 Score: 143 bits (360), Expect = 1.160e-34 Identity = 101/274 (36.86%), Postives = 154/274 (56.20%), Query Frame = 2
Query: 308 KNDMLVVAAPRASMAEVERAGPAQLADSQRYWKIEKQEGDLTGQLGELEQGTRQRNREFEAKLRAIEERIRGLEAGIVREIEECEETHAEMFAGLEEKLKAASAFVEAEAEASITARFEPGLLE----HVERVEADDARVEDFVHVTVPRVVDEQSGAVTRKLQKARETFDIENAKIAKRERKLVSRFGTHVKGTAQSFEDEKATRLGKLWLLGEDLEGVEHMDERGDEALQLSIVKAIKAMRGDVAATSEERGYQDGLLLDSLAHAQQRLQIS 1117
K ++L +AAP A A V +A PA L +S+R +++ E DLT +L +LE+GTR RNR+F + +ER + EA + E E E H + + L A +E + + A + L+ H +RVE VE FV+VT P V++ + A+ +K++ ARE FDIENAK+ KRE K+V R H TAQSF D + R+ K+ LL EDLE + D+R +E I+ ++ M+ + ++ R QD +LDS+ +Q++LQ S
Sbjct: 4 KREILEIAAPGARPASVLQAPPAVLPESKRVPAVDELEEDLTHKLVDLEEGTRARNRDFYEQTDKFKERTQRWEAKLTTETVERNEAHQSVLDSFQVLLHTEMAKIETKIH-DMYAGYHDSLIPVQEAHQDRVEEF---VEHFVNVTAPEVIEREQKAMEKKIKSAREGFDIENAKVRKREEKIVYRAEEHEHRTAQSFTDNHSGRVAKIALLREDLEAGQRTDDREEETRLRLIMTELRQMQERIDDLTKVREVQDCTILDSMLRSQEKLQDS 273
BLAST of mRNA_P-littoralis_Contig119.42.1 vs. uniprot
Match: A0A8J2T1W7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T1W7_9STRA) HSP 1 Score: 125 bits (313), Expect = 1.530e-27 Identity = 90/262 (34.35%), Postives = 141/262 (53.82%), Query Frame = 2
Query: 344 SMAEVERAGPAQLADSQRYWKIEKQEGDLTGQLGELEQGTRQRNREFEAKLRAIEERIRGLEAGIVREIEECEETHAEMFAGLEEKLKAASAFVEAEAEASITARFEPGLLEHVERVEADDARVED----FVHVTVPRVVDEQSGAVTRKLQKARETFDIENAKIAKRERKLVSRFGTHVKGTAQSFEDEKATRLGKLWLLGEDLEGVEHMDERGDEALQLSIVKAIKAMRGDVAATSEERGYQDGLLLDSLAHAQQRLQIS 1117
S + +A A+ ++R I++ L ++ LE TR RN E L AI +R EA + E++ +E + + + L+ A+ E E+++ E E + E A++ED +V +T+P +D +GA+ RKLQKA +TFDIENAKI KRE+K+ RF H++ +AQ FEDE+ATR+ K L ED E D+R +E +I +I ++ + S+ R +D LLDS+ +AQ +LQ S
Sbjct: 104 SPVKARKAPIAEAKATKRAAPIQQHIEGLNEEMTSLEASTRIRNEELHRHLDAIRQRGANWEAKLKLEVQARDEASKMLRSHFDTILEEATT----EEESNLMKMIERFHGELIPAQETRQAKLEDDVTEWVDITIPETIDRLTGAIARKLQKAHDTFDIENAKILKREQKITDRFAHHIQRSAQLFEDERATRVAKFLTLDEDCRDTERHDDRAEERHIAAIHHSIVDVQKLLQEASDSREREDNTLLDSMIYAQSQLQAS 361
BLAST of mRNA_P-littoralis_Contig119.42.1 vs. uniprot
Match: A0A024UEM5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UEM5_9STRA) HSP 1 Score: 116 bits (291), Expect = 3.320e-25 Identity = 80/264 (30.30%), Postives = 135/264 (51.14%), Query Frame = 2
Query: 326 VAAPRASMAEVERAGPAQLADSQRYWKIEKQEGDLTGQLGELEQGTRQRNREFEAKLRAIEERIRGLEAGIVREIEECEETHAEMFAGLEEKLKAASAFVEAEAEASITARFEPGLLEHVERVEADDARVEDFVHVTVPRVVDEQSGAVTRKLQKARETFDIENAKIAKRERKLVSRFGTHVKGTAQSFEDEKATRLGKLWLLGEDLEGVEHMDERGDEALQLSIVKAIKAMRGDVAATSEERGYQDGLLLDSLAHAQQRLQIS 1117
+AAP + V R Q DS+R I E L+ + EL++ T RN E + AI ER R E + E++ +E+ A + AG + ++A A + +A + R + +L R + + +F++VT+P +++ G +TR+L K+ ETFDI+N K+ KRE+K+ ++ +H + TAQ+F DEK R L E++ D+R E Q +++ I A+ R +D LL+ ++ A +RL S
Sbjct: 24 IAAPNGPLLRVIRPPNGQEIDSKRTDLIVTAEELLSHDMDELKEATHVRNVEIQKHFDAINERSRHFEEKLSAEMKARDESIAALRAGFTDAFESAFAAMAVKASDAFHVRLDETILAQEMREDNVQVQFNEFINVTIPSIIEALQGTITRRLDKSHETFDIDNTKLLKREKKMTNQVESHERKTAQAFVDEKERRSTTFVALQEEMHTTMRTDDRQAEKKQSGMIETIVALTSQYDEVRRVREAEDAELLEKVSSAMERLHTS 287
BLAST of mRNA_P-littoralis_Contig119.42.1 vs. uniprot
Match: A0A7S2UVA4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVA4_9STRA) HSP 1 Score: 109 bits (273), Expect = 1.010e-24 Identity = 61/125 (48.80%), Postives = 83/125 (66.40%), Query Frame = 2
Query: 743 RVVDEQSGAVTRKLQKARETFDIENAKIAKRERKLVSRFGTHVKGTAQSFEDEKATRLGKLWLLGEDLEGVEHMDERGDEALQLSIVKAIKAMRGDVAATSEERGYQDGLLLDSLAHAQQRLQIS 1117
+VV++QSGAVTR+LQKA ETFDIENAKI KRE+K++ R T+ + TAQ FEDE TR+ KL L ED+E E D + +E + +I +K + + S R D LLLD++ +QQRL+ S
Sbjct: 1 KVVEQQSGAVTRRLQKAHETFDIENAKINKREQKIIQRQHTYFQQTAQGFEDESTTRMAKLQLFREDIEAAELNDNKQEERIISTITIDLKDTKDRIQDASNIREQNDCLLLDNMLASQQRLKKS 125
BLAST of mRNA_P-littoralis_Contig119.42.1 vs. uniprot
Match: W4GS08_9STRA (Uncharacterized protein n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GS08_9STRA) HSP 1 Score: 113 bits (283), Expect = 5.180e-24 Identity = 85/276 (30.80%), Postives = 132/276 (47.83%), Query Frame = 2
Query: 290 GNMPQHKNDMLVVAAPRASMAEVERAGPAQLADSQRYWKIEKQEGDLTGQLGELEQGTRQRNREFEAKLRAIEERIRGLEAGIVREIEECEETHAEMFAGLEEKLKAASAFVEAEAEASITARFEPGLLEHVERVEADDARVEDFVHVTVPRVVDEQSGAVTRKLQKARETFDIENAKIAKRERKLVSRFGTHVKGTAQSFEDEKATRLGKLWLLGEDLEGVEHMDERGDEALQLSIVKAIKAMRGDVAATSEERGYQDGLLLDSLAHAQQRLQIS 1117
G + VA + V R Q DS+R I E L + +L+ T RN E + AI ER R E + E++ +E+ AE+ AG+ + A + +EA+A A+ R +L R +F+HVTVP +++ G VTR+L K+ ETFDI+N K+ KRE+K+ ++ +H + TAQ+F DEK R L E + D+R E Q ++ I A++ R +D LL+ ++ A +RL S
Sbjct: 14 GYQAYRERSNATVATRNGPLLRVIRPPNDQETDSKRTELIVNAEELLGHDMEDLKDATHVRNLEIQTHFDAINERSRHFEEKLGAEMKARDESIAELRAGVMRAFEGAFSAMEAKAGAAFDLRLNDTILAQDTRETNVQVHFHEFIHVTVPGIIEALQGTVTRRLDKSHETFDIDNTKLVKREKKMTNQVESHERKTAQAFMDEKDRRSTTFIALQEGIHTTMRTDDRQAEKKQNGMIDTIVALKSQYDEERRVREAEDAELLEKVSSAMERLHRS 289
BLAST of mRNA_P-littoralis_Contig119.42.1 vs. uniprot
Match: A0A067CHC2_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CHC2_SAPPC) HSP 1 Score: 112 bits (280), Expect = 9.300e-24 Identity = 85/283 (30.04%), Postives = 135/283 (47.70%), Query Frame = 2
Query: 278 EGDSGNMPQHKNDML-VVAAPRASMAEVERA--GPAQLADSQRYWKIEKQEGDLTGQLGELEQGTRQRNREFEAKLRAIEERIRGLEAGIVREIEECEETHAEMFAGLEEKLKAASAFVEAEAEASITARFEPGLLEHVERVEADDARVEDFVHVTVPRVVDEQSGAVTRKLQKARETFDIENAKIAKRERKLVSRFGTHVKGTAQSFEDEKATRLGKLWLLGEDLEGVEHMDERGDEALQLSIVKAIKAMRGDVAATSEERGYQDGLLLDSLAHAQQRLQIS 1117
E D G ++ +AAP + V + L +S+R IE E +L + EL+ T RN E + + AI R E + E + +E+ A + A A A +EA+ A+ R E + R ++F+ VTVP +++ G +TR+L K+ ETFDI+N K+ KRE+K+ S+F +H + TAQ+F DEK R+ L E + D+R E Q + ++ I A+ E R +D LL+ ++ A +RL S
Sbjct: 9 EPDDGGFQAYREKFNETIAAPNGPLLRVIQPPLDDGSLLESKRTELIETAEENLEQDMDELKDATHIRNVEIQRQFDAIMTRGHHFEVKLADETRQRDESIAMLKATFTSAFDDAYAEMEAKTNAAFNRRLEQTIAAEEARENNVQVLFDEFIQVTVPNIIEALQGTITRRLDKSHETFDIDNTKLLKREKKMTSQFESHERKTAQAFVDEKDRRVSTFIALQEAIHATMSSDDRQTERKQSAHIETIVALYNQYLEEKEMRETEDAELLEKVSSAMERLHAS 291
BLAST of mRNA_P-littoralis_Contig119.42.1 vs. uniprot
Match: A0A485KLG8_9STRA (Aste57867_8855 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KLG8_9STRA) HSP 1 Score: 112 bits (279), Expect = 1.070e-23 Identity = 86/284 (30.28%), Postives = 141/284 (49.65%), Query Frame = 2
Query: 278 EGDSGNMPQHKNDMLVVAAPRASMAEVERAGPAQLADSQRYWKIEKQEGDLTGQLGELEQGTRQRNREFEAKLRAIEERIRGLEAGIVREIEECEETHAEMFAGLEEKLKAASAFVEAEAEASITARFEPGLLEHVERVEADDARVE----DFVHVTVPRVVDEQSGAVTRKLQKARETFDIENAKIAKRERKLVSRFGTHVKGTAQSFEDEKATRLGKLWLLGEDLEGVEHMDERGDEALQLSIVKAIKAMRGDVAATSEERGYQDGLLLDSLAHAQQRLQIS 1117
E ++G + +AAP + V R + DS+R I+ E L + EL+ T RN E + AI +R EA + E+ +E+ + A A A +EA A A+ T R + E + +A +ARV+ +F+ VTVP +++ G +TR+L+K+ ETFDI+N K+ KRE+K+ + TH + TAQ+F DE+ R+ L E + +D+R E Q S ++ I A++ R +D LL+ ++ + +RL S
Sbjct: 4 EAETGFQAYREKYNETIAAPNGPLLRVIRPPNDEEIDSKRTDLIDAAEELLDHDMDELKDSTHVRNLEIQKHFDAIMDRGHHFEAKLGDEMRARDESIGALRAAFTAAFDNAYAAMEATAGAAFTVRLD----ETIAAEDAREARVQTQFDEFIQVTVPGIIEALQGTITRRLEKSHETFDIDNTKLLKREKKMTVQVETHERRTAQAFVDERDRRVSTFVALQEGIHSTMRVDDRQAEKKQNSTIETILALQAQFNEEKRVRETEDAELLEKVSGSMERLHTS 283
BLAST of mRNA_P-littoralis_Contig119.42.1 vs. uniprot
Match: A0A1V9ZI54_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZI54_9STRA) HSP 1 Score: 111 bits (277), Expect = 2.150e-23 Identity = 87/290 (30.00%), Postives = 143/290 (49.31%), Query Frame = 2
Query: 263 NTEKTEGDSGNMPQHKNDML-VVAAPRASMAEVERAGPAQLADSQRYWKIEKQEGDLTGQLGELEQGTRQRNREFEAKLRAIEERIRGLEAGIVREIEECEETHAEMFAGLEEKLKAASAFVEAEAEASITARFEPGLLEHVERVEADDARVE----DFVHVTVPRVVDEQSGAVTRKLQKARETFDIENAKIAKRERKLVSRFGTHVKGTAQSFEDEKATRLGKLWLLGEDLEGVEHMDERGDEALQLSIVKAIKAMRGDVAATSEERGYQDGLLLDSLAHAQQRLQIS 1117
++++ + D G ++ +AAP + V + +S+R IE E +L + EL++ T RN E + + AI R E + E + +E+ A L+ K AA V EA TA F L + + + EA + V+ +F+ VTVP +++ G +TR+L+K+ ETFDI+N K+ KRE+K+ S+ H + TAQ+F DEK R+ L E + D+R E Q + ++ I A+ E R +D LL+ ++ A +RL S
Sbjct: 2 SSQQLDRDDGGFQAYREKFNETIAAPNGPLLRVIQPPLDGTLESKRTELIESAEENLEHDMDELKEATHIRNVEIQRQFDAIMTRGHHFEVKLADEARQRDES----IALLQTKFTAAFDDVYESMEAKTTAAFNLRLNDTIAKEEARENNVQVLFDEFIQVTVPNIIEALQGTITRRLEKSHETFDIDNTKLLKREKKMTSQVEGHERKTAQAFVDEKDRRVSTFVALQEAIHATMRTDDRQTERKQNAHIETIVALYNQYLEEKEVRETEDAELLEKVSSAMERLHAS 287 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig119.42.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig119.42.1 >prot_P-littoralis_Contig119.42.1 ID=prot_P-littoralis_Contig119.42.1|Name=mRNA_P-littoralis_Contig119.42.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=296bp MPQHKNDMLVVAAPRASMAEVERAGPAQLADSQRYWKIEKQEGDLTGQLGback to top mRNA from alignment at P-littoralis_Contig119:261972..273937+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig119.42.1 ID=mRNA_P-littoralis_Contig119.42.1|Name=mRNA_P-littoralis_Contig119.42.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=11966bp|location=Sequence derived from alignment at P-littoralis_Contig119:261972..273937+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig119:261972..273937+ >mRNA_P-littoralis_Contig119.42.1 ID=mRNA_P-littoralis_Contig119.42.1|Name=mRNA_P-littoralis_Contig119.42.1|organism=Pylaiella littoralis U1_48|type=CDS|length=888bp|location=Sequence derived from alignment at P-littoralis_Contig119:261972..273937+ (Pylaiella littoralis U1_48)back to top |