mRNA_P-littoralis_Contig1183.7.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1183.7.1 vs. uniprot
Match: A0A6H5K604_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K604_9PHAE) HSP 1 Score: 348 bits (892), Expect = 3.050e-118 Identity = 171/235 (72.77%), Postives = 179/235 (76.17%), Query Frame = 1
Query: 220 MSVKTAETSFHLFCEKFSAALWDKWVYLPVGDELKKVERVFGMSGYPGEQQXXXXXH------------------------------QTGRIIAATKSYPGSENDKTVIQRDRSIWRIQREEPWSTYKYNLYNADGSETEHKGAWLVVDGGYQKIPLLIPPIKHHATNEEHMWSRRLESMRKDIECCYGRVKGRFRLFRGDILYKTRASIDNAWFTTCILHNMLHHYNKLDVMTE 834
MSV TAE SFH FCEKFSAALWD WV LPVGDELK+VERVF SGYPG H TGRIIAATKSYPGSENDKT+IQRD+SIWRI+ EEPWS+ KY LYNADGSETE+KGAWLVVDGGYQKIPLLIPPIKHHAT EEH WSRRLESMRKDIECCYGRVKGRFRLF+ ILYKTR SIDN WFT CILHNMLHHY+KLDVMTE
Sbjct: 1 MSVATAEKSFHHFCEKFSAALWDTWVKLPVGDELKEVERVFRKSGYPGAISSTDCTHFRWPGGPSSEARMNTGKEGYPTVVVEATCDHTGRIIAATKSYPGSENDKTIIQRDKSIWRIRDEEPWSSLKYKLYNADGSETEYKGAWLVVDGGYQKIPLLIPPIKHHATVEEHDWSRRLESMRKDIECCYGRVKGRFRLFKAGILYKTRDSIDNPWFTACILHNMLHHYDKLDVMTE 235
BLAST of mRNA_P-littoralis_Contig1183.7.1 vs. uniprot
Match: A0A6H5JV45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV45_9PHAE) HSP 1 Score: 306 bits (784), Expect = 2.170e-99 Identity = 149/300 (49.67%), Postives = 197/300 (65.67%), Query Frame = 1
Query: 10 SREARQFVEAFRIPYEMFRGIVEAMAPAFPTATRDVAGRECIPVELKVWCVALKVLAAGNSFQDVATFSGMSVKTAETSFHLFCEKFSAALWDKWVYLPVGDELKKVERVFGMSGYPGEQQXXXXXH------------------------------QTGRIIAATKSYPGSENDKTVIQRDRSIWRIQREEPWSTYKYNLYNADGSETEHKGAWLVVDGGYQKIPLLIPPIKHHATNEEHMWSRRLESMRKDIECCYGRVKGRFRLFRGDILYKTRASIDNAWFTTCILHNMLHHYNKL 819
SREA+ F FR+P+E FR V+ + FPTATRDVAGR+C+P+ELKV V L+VL GN F DVA S MS +TAE SFH FC+ FS+ LW +WV LP G+ LKKV +G G PG H +GRI+++TK +PG+ENDKTV++RD S+ R++ EEPW++YK+ L++ +G+ TEH G WL+VDGGY ++P LI P K +A+ + WS+R ES+RKDIEC +GR+KGRFRLF+ IL+ TR IDNAWFT CI+HNMLH ++ L
Sbjct: 66 SREAKAFRSDFRVPHEFFRHFVDLVRTVFPTATRDVAGRQCVPLELKVLGV-LQVLGRGNCFADVAQLSLMSRQTAEKSFHRFCDCFSSGLWHQWVTLPEGEVLKKVAGEYGDMGCPGAVASVDCTHISWPACPFSETNTHKGKEGYTTLVYEASCDHSGRILSSTKGFPGAENDKTVVKRDLSVLRMREEEPWASYKFVLFDLEGNTTEHTGGWLIVDGGYHRVPSLICPFKEYASEAQQEWSKRFESIRKDIECLFGRLKGRFRLFKTGILFGTREKIDNAWFTACIIHNMLHQFDGL 364
BLAST of mRNA_P-littoralis_Contig1183.7.1 vs. uniprot
Match: A0A6H5L0H2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0H2_9PHAE) HSP 1 Score: 299 bits (766), Expect = 2.850e-95 Identity = 150/301 (49.83%), Postives = 185/301 (61.46%), Query Frame = 1
Query: 10 SREARQFVEAFRIPYEMFRGIVEAMAPAFPTATRDVAGRECIPVELKVWCVALKVLAAGNSFQDVATFSGMSVKTAETSFHLFCEKFSAALWDKWVYLPVGDELKKVERVFGMSGYPGEQQXXXXXH------------------------------QTGRIIAATKSYPGSENDKTVIQRDRSIWRIQREEPWSTYKYNLYNADGSETEHKGAWLVVDGGYQKIPLLIPPIKHHATNEEHMWSRRLESMRKDIECCYGRVKGRFRLFRGDILYKTRASIDNAWFTTCILHNMLHHYNKLD 822
SREAR F FR+PYE F VE + P FP DV GR C+P+ELKV V L+VL GN F DVA FS MS TAE SFH FC F+A LW W+ LP G+ L++VE + GYPG H GRI+A+TK YPG+ENDKTV+QRD S+ R++ EEPW +YKY +Y+ G TEH G WL+ DGGY ++PLLI P K +A E WS+RLES+RKDIEC +GR+KGRFRLF+ IL+ R ID+AWFT CI+HNML ++ LD
Sbjct: 164 SREARAFRADFRVPYEFFLEFVEMVRPVFPAREHDVCGRLCVPLELKVLGV-LQVLGRGNCFADVANFSLMSRTTAEQSFHRFCHCFAAGLWRTWIRLPEGEGLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVFEAICDHAGRILASTKGYPGAENDKTVVQRDLSVRRVEGEEPWVSYKYEMYDETGDVTEHTGGWLIADGGYHRVPLLICPFKVYANVAEQQWSKRLESVRKDIECLFGRLKGRFRLFKTGILFGDRTKIDDAWFTACIIHNMLLAFDGLD 463
BLAST of mRNA_P-littoralis_Contig1183.7.1 vs. uniprot
Match: A0A6H5KVL5_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVL5_9PHAE) HSP 1 Score: 273 bits (697), Expect = 4.860e-88 Identity = 144/251 (57.37%), Postives = 162/251 (64.54%), Query Frame = 1
Query: 166 LKVLAAGNSFQDVATFSGMSVKTAETSFHLFCEKFSAALWDKWVYLPVGDELKKVERVFGMSGYPGEQQXXXXXHQTGRIIAATKSYPGSENDKTVIQRDRSIWRIQREEPWSTYKYNLYNADGSETEHKGAWLVVDGGYQK----------------------------IPLLIPPIKHHATNEEHMWSRRLESMRKDIECCYGRVKGRFRLFRGDILYKTRASIDNAWFTTCILHNMLHHYNKLDVMTE 834
LKVLA+G FQDVA+FS MS TAETSFH FCEKFS LWD WV LP GDE KK G GY H +GRIIAATK+YPG+ENDKTVI RD+SIWRI+ EEPW +Y + AW++VDGGY K IPLLIPPIK H T EEH WSRRLESMRKDIECC+GRVKGR+RLF GD+L+ TR +DNAWFT CILHNMLH +N+LD M E
Sbjct: 4 LKVLASGCCFQDVASFSLMSRTTAETSFHHFCEKFSEGLWDTWVKLPGGDEFKKNTHT-GKEGYTSLVVECTCDH-SGRIIAATKTYPGAENDKTVIARDKSIWRIRDEEPWKSY-------------YTRAWIIVDGGYPKSLETDHVVSTQVRIKPTPDSHFRSAVSHIPLLIPPIKTHNTVEEHDWSRRLESMRKDIECCFGRVKGRWRLFGGDMLFSTRQKVDNAWFTACILHNMLHSFNRLDEMEE 239
BLAST of mRNA_P-littoralis_Contig1183.7.1 vs. uniprot
Match: A0A6H5JU81_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU81_9PHAE) HSP 1 Score: 243 bits (621), Expect = 2.430e-76 Identity = 113/164 (68.90%), Postives = 129/164 (78.66%), Query Frame = 1
Query: 343 GMSGYPGEQQXXXXXHQTGRIIAATKSYPGSENDKTVIQRDRSIWRIQREEPWSTYKYNLYNADGSETEHKGAWLVVDGGYQKIPLLIPPIKHHATNEEHMWSRRLESMRKDIECCYGRVKGRFRLFRGDILYKTRASIDNAWFTTCILHNMLHHYNKLDVMTE 834
G GY H +GRIIAATK+YPG+ENDKTVI R + IWRI+ EEPW +YK+ LYNADG+ETE GAW++VDGGY KIPLLIPPIK H T EEH WSRRLESMRKDIECC+GRVKG +RLF GDIL+ TR +DNAWFT CILHNMLH +N+LD M E
Sbjct: 84 GKEGYTSLVVECTCDH-SGRIIAATKTYPGAENDKTVIARGKFIWRIRDEEPWKSYKFKLYNADGTETECTGAWIIVDGGYPKIPLLIPPIKTHNTVEEHGWSRRLESMRKDIECCFGRVKGLWRLFGGDILFSTRPKVDNAWFTACILHNMLHSFNRLDEMEE 246
BLAST of mRNA_P-littoralis_Contig1183.7.1 vs. uniprot
Match: A0A6H5K7N8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7N8_9PHAE) HSP 1 Score: 243 bits (621), Expect = 1.760e-74 Identity = 124/222 (55.86%), Postives = 140/222 (63.06%), Query Frame = 1
Query: 259 CEKFSAALWDKWVYLPVGDELKKVERVFGMSGYPGEQQXXXXXH------------------------------QTGRIIAATKSYPGSENDKTVIQRDRSIWRIQREEPWSTYKYNLYNADGSETEHKGAWLVVDGGYQKIPLLIPPIKHHATNEEHMWSRRLESMRKDIECCYGRVKGRFRLFRGDILYKTRASIDNAWFTTCILHNMLHHYNKLDVMTE 834
CEKFS LWD WV LP GDELKKVE ++ GYPG H +GRIIAATK+ PG+ENDKTVI RD+SIWRI+ EEPW +Y + AW++VDGGY KIPLLIPPIK H T EEH WSRRLESMRKDIECC+GRVKGR+RLF GDIL+ TR DNA FT CILHNMLH +N+LD M E
Sbjct: 90 CEKFSEGLWDTWVKLPRGDELKKVEEIYRKCGYPGATGSTDCTHFRWPGCPFSEKNTHTGKEGYTSLVVECACDHSGRIIAATKTCPGAENDKTVIARDKSIWRIRDEEPWKSY-------------YTRAWIIVDGGYPKIPLLIPPIKTHNTVEEHDWSRRLESMRKDIECCFGRVKGRWRLFGGDILFSTRQKGDNACFTACILHNMLHSFNRLDEMEE 298
BLAST of mRNA_P-littoralis_Contig1183.7.1 vs. uniprot
Match: A0A6H5KCK8_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCK8_9PHAE) HSP 1 Score: 238 bits (608), Expect = 1.030e-73 Identity = 131/257 (50.97%), Postives = 151/257 (58.75%), Query Frame = 1
Query: 166 LKVLAAGNSFQDVATFSGMSVKTAETSFHLFCEKFSAALWDKWVYLPVGDELKKVERVFGMSGYPGEQQXXXXXHQTGRIIAATKSYPGSENDKTVIQRDRSIWRIQREEPWSTYKYNLYNADGSETEHKGAWLVVDGGYQK--------------IPLLIPPIKHHATNEEHMWSRRLESMRKDIECCYGRVKGRFRLF--------------------RGDILYKTRASIDNAWFTTCILHNMLHHYNKLDVMTE 834
LKVLA+G FQDVA+FS MS TAETSFH FCEKF LWD W +G G H +GRIIAATK+YPG+ENDKTVI RD+SIWRI+ EEPW +Y AW++VDGGY K IPLLIPPIK H T +EH WSRRL++MRKDIECC+GRVKGR+RLF GDIL+ R +DNAWFT CILHNMLH +N+LD M E
Sbjct: 4 LKVLASGCCFQDVASFSLMSRTTAETSFHHFCEKFFEGLWDTWNTY---------------TGKEGHMSLVVECH-SGRIIAATKTYPGAENDKTVIARDKSIWRIRDEEPWKSYDTR-------------AWIIVDGGYPKASFGCCHFRSAVSQIPLLIPPIKTHNTVKEHDWSRRLDNMRKDIECCFGRVKGRWRLFGVPVGNNAFSQRXXXXXXXXXGDILFSARQKVDNAWFTACILHNMLHSFNRLDEMEE 231
BLAST of mRNA_P-littoralis_Contig1183.7.1 vs. uniprot
Match: A0A6H5KRU1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRU1_9PHAE) HSP 1 Score: 231 bits (590), Expect = 6.450e-72 Identity = 110/231 (47.62%), Postives = 142/231 (61.47%), Query Frame = 1
Query: 220 MSVKTAETSFHLFCEKFSAALWDKWVYLPVGDELKKVERVFGMSGYPGEQQXXXXXH------------------------------QTGRIIAATKSYPGSENDKTVIQRDRSIWRIQREEPWSTYKYNLYNADGSETEHKGAWLVVDGGYQKIPLLIPPIKHHATNEEHMWSRRLESMRKDIECCYGRVKGRFRLFRGDILYKTRASIDNAWFTTCILHNMLHHYNKLD 822
MS TAE SFH FC F+A LW W+ LP G++L++VE + GYPG H GRI+A+TK YPG+ENDKTV+QRD S+ R++ EEPW +YKY +Y+ G TEH G WL+ +GGY ++PLLI P K +A E WS+RLES+RKDIEC +GR+KGRFRLF+ IL+ R ID+AWFT CI+HNML ++ LD
Sbjct: 1 MSRTTAEQSFHRFCHCFAAGLWRTWIRLPEGEDLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVFEAICDHAGRILASTKGYPGAENDKTVVQRDLSVRRVEGEEPWVSYKYEMYDETGDVTEHTGGWLIAEGGYHRVPLLICPFKVYANVAEQQWSKRLESVRKDIECLFGRLKGRFRLFKTGILFGDRTKIDDAWFTACIIHNMLLAFDGLD 231
BLAST of mRNA_P-littoralis_Contig1183.7.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE) HSP 1 Score: 226 bits (576), Expect = 2.470e-67 Identity = 120/310 (38.71%), Postives = 178/310 (57.42%), Query Frame = 1
Query: 1 DEDSREARQFVEAFRIPYEMFRGIVEAMAPA--FPTATRDVAGRECIPVELKVWCVALKVLAAGNSFQDVATFSGMSVKTAETSFHLFCEKFSAALWDKWVYLPVGDELKKVERVFGMSGYPGEQQXXXXXH------------------------------QTGRIIAATKSYPGSENDKTVIQRDRSIWRIQREEPWSTYKYNLYNADGSETEHKGAWLVVDGGYQKIPLLIPPIKHHATNEEHMWSRRLESMRKDIECCYGRVKGRFRLFRGDILYKTRASIDNAWFTTCILHNMLHHYNKLDVMTE 834
D +REAR+F FR+PY F +VE + FPT DV GR+ +PVELKV L++L+ GN F D+ S +S +T ++FH FC+ F+A L+D++VYLP G++L+KV + G+PG H +GR++A T+ + G+ NDKT+I+ D+++ RI+ + ++ KY LY DG + E KG +L+VD GY K LIPP K + ++S+RLES RKD+EC +G +KGRFR+ + I + + IDN +FT CILHNMLH ++ M+E
Sbjct: 123 DHTTREARRFRNNFRVPYPFFVHLVELVRDRDWFPTGESDVTGRQAVPVELKV-LACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSE 431
BLAST of mRNA_P-littoralis_Contig1183.7.1 vs. uniprot
Match: D7FV01_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV01_ECTSI) HSP 1 Score: 215 bits (547), Expect = 2.500e-65 Identity = 95/139 (68.35%), Postives = 114/139 (82.01%), Query Frame = 1
Query: 418 KSYPGSENDKTVIQRDRSIWRIQREEPWSTYKYNLYNADGSETEHKGAWLVVDGGYQKIPLLIPPIKHHATNEEHMWSRRLESMRKDIECCYGRVKGRFRLFRGDILYKTRASIDNAWFTTCILHNMLHHYNKLDVMTE 834
K YPG+ENDKT+I RD+S+WRI+ EEPW + KY L NADG+ETE+ GAWL+VDGGY KIPLL+PPIK H + E H SRR+ES+RKDIECC+GRVKGR+RLFRG+I + +R IDNAW T CILHNMLH +N LD M E
Sbjct: 93 KCYPGAENDKTIISRDKSVWRIRDEEPWKSMKYKLRNADGTETEYTGAWLIVDGGYPKIPLLMPPIKTHNSIERHSCSRRMESVRKDIECCFGRVKGRWRLFRGNIPFGSREKIDNAWLTACILHNMLHKFNGLDEMEE 231 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1183.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1183.7.1 >prot_P-littoralis_Contig1183.7.1 ID=prot_P-littoralis_Contig1183.7.1|Name=mRNA_P-littoralis_Contig1183.7.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=278bp DEDSREARQFVEAFRIPYEMFRGIVEAMAPAFPTATRDVAGRECIPVELKback to top mRNA from alignment at P-littoralis_Contig1183:37119..39172+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1183.7.1 ID=mRNA_P-littoralis_Contig1183.7.1|Name=mRNA_P-littoralis_Contig1183.7.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2054bp|location=Sequence derived from alignment at P-littoralis_Contig1183:37119..39172+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1183:37119..39172+ >mRNA_P-littoralis_Contig1183.7.1 ID=mRNA_P-littoralis_Contig1183.7.1|Name=mRNA_P-littoralis_Contig1183.7.1|organism=Pylaiella littoralis U1_48|type=CDS|length=834bp|location=Sequence derived from alignment at P-littoralis_Contig1183:37119..39172+ (Pylaiella littoralis U1_48)back to top |