mRNA_P-littoralis_Contig117.126.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig117.126.1 vs. uniprot
Match: A0A6H5JF82_9PHAE (BZIP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF82_9PHAE) HSP 1 Score: 186 bits (472), Expect = 3.140e-49 Identity = 139/231 (60.17%), Postives = 145/231 (62.77%), Query Frame = 2
Query: 380 EEAPAVGETAVERRKSRAFKLRQTRSRNAARIQQXXXXXXXXXXXXXXXXXXXXXXXXXVDVKPDFAMLQAEALLAPGVDKQAWKKQQRMIRNRESAALSRKRKRDRIESLEEQVARLAEENRGLRHRLAKYEASPQQARYKYARQTAV-PHPTAPHRTHSSTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGRGSNCGKPVSCLNSRDLPA 1069
E+A TA ERR+SRA KLRQTRSRNA RIQQ XXXXX DVKPD AMLQAEALLAPGVDKQAWKKQQRMIRNRESAALSRKRKRD+IESLE+QVARLAEENRGLRHRLAKYEASPQQARYKYARQT+ P AP T S XXXXXX G G NCGKPVSCLNSR+ A
Sbjct: 80 EKASETTMTAGERRRSRALKLRQTRSRNAVRIQQQVYTSAEDSEXXXXXEG---------DVKPDIAMLQAEALLAPGVDKQAWKKQQRMIRNRESAALSRKRKRDKIESLEDQVARLAEENRGLRHRLAKYEASPQQARYKYARQTSTTPRSGAPRATPSGGGRNGSSGNNEGPAXXXXXXRSRESGGAAAAAFGGRGSNGGVSRII---GGGVNCGKPVSCLNSRESAA 298
BLAST of mRNA_P-littoralis_Contig117.126.1 vs. uniprot
Match: D7FYX6_ECTSI (Similar to activating transcription factor 6 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYX6_ECTSI) HSP 1 Score: 180 bits (457), Expect = 6.940e-46 Identity = 121/153 (79.08%), Postives = 123/153 (80.39%), Query Frame = 2
Query: 404 TAVERRKSRAFKLRQTRSRNAARIQQXXXXXXXXXXXXXXXXXXXXXXXXXVDVKPDFAMLQAEALLAPGVDKQAWKKQQRMIRNRESAALSRKRKRDRIESLEEQVARLAEENRGLRHRLAKYEASPQQARYKYARQTAV-PHPTAPHRTHS 859
TA ERR+SRA KLRQTRSRNA RIQQ XXXXXXXX DVKPD AMLQAEALLAPGVDKQAWKKQQRMIRNRESAALSRKRKRD+IESLEEQVARLAEENRGLRHRLAKYEASPQQARYKYARQTA P AP T S
Sbjct: 89 TAGERRRSRALKLRQTRSRNAVRIQQQVYTSAEDSXXXXXXXX---------DVKPDLAMLQAEALLAPGVDKQAWKKQQRMIRNRESAALSRKRKRDKIESLEEQVARLAEENRGLRHRLAKYEASPQQARYKYARQTATTPRSGAPRATPS 232
BLAST of mRNA_P-littoralis_Contig117.126.1 vs. uniprot
Match: A0A6H5K1A6_9PHAE (BZIP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1A6_9PHAE) HSP 1 Score: 60.1 bits (144), Expect = 3.680e-6 Identity = 37/57 (64.91%), Postives = 43/57 (75.44%), Query Frame = 2
Query: 608 PGVDKQAWKKQQRMIRNRESAALSRKRKRDRIESLEEQVARLAEENRGLRHRLAKYE 778
PGV ++ +KQQRM+RNRESAALSRKRK DRI LE QV L EENR LR R+ + E
Sbjct: 56 PGVSEKEVRKQQRMLRNRESAALSRKRKSDRIGELEIQVEALQEENRRLRQRIDRQE 112
BLAST of mRNA_P-littoralis_Contig117.126.1 vs. uniprot
Match: A0A6H5JF68_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF68_9PHAE) HSP 1 Score: 57.0 bits (136), Expect = 4.040e-6 Identity = 52/131 (39.69%), Postives = 61/131 (46.56%), Query Frame = 2
Query: 1508 MEVTSDCDAGNKPTA--ENSSAFVVDSGYSSSSSLGETCDASVTVAEVQQXXXXXXXXXHVCVSLDQDVVEFDDAACDTLLMDILSGXXXXXXXXXXXXXXXXXXX---MIMVNSASGDLNEGFVKPEYSN 1885
MEVTSDCD G A ++AFV DSG+SSS SLG+ + Q V D D DDAACD+ LMDILSG M++VN AS LN GFVK E S+
Sbjct: 1 MEVTSDCDEGRDGVAVPTPAAAFVGDSGHSSSFSLGDRTSFAGGGPHQQY-----------AVEFDID----DDAACDSFLMDILSGGDGPQGDGNDDDGFLSLLSDDDMMIVNPASEGLNVGFVKRENSS 116
BLAST of mRNA_P-littoralis_Contig117.126.1 vs. uniprot
Match: D8LF84_ECTSI (BZIP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF84_ECTSI) HSP 1 Score: 59.7 bits (143), Expect = 5.000e-6 Identity = 37/57 (64.91%), Postives = 43/57 (75.44%), Query Frame = 2
Query: 608 PGVDKQAWKKQQRMIRNRESAALSRKRKRDRIESLEEQVARLAEENRGLRHRLAKYE 778
PGV ++ +KQQRM+RNRESAALSRKRK DRI LE QV L EENR LR R+ + E
Sbjct: 56 PGVSEKEVRKQQRMLRNRESAALSRKRKSDRIGELEIQVEALQEENRRLRQRIDRKE 112
BLAST of mRNA_P-littoralis_Contig117.126.1 vs. uniprot
Match: A0A4D9D9D1_9STRA (BZIP domain-containing protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D9D1_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 4.020e-5 Identity = 34/49 (69.39%), Postives = 42/49 (85.71%), Query Frame = 2
Query: 632 KKQQRMIRNRESAALSRKRKRDRIESLEEQVARLAEENRGLRHRLAKYE 778
KKQ RMIRNRESAALSRKRKRD++E+LE +V L ++NR L+ RLA+YE
Sbjct: 251 KKQLRMIRNRESAALSRKRKRDQVEALELEVEALKDKNRQLKQRLARYE 299
BLAST of mRNA_P-littoralis_Contig117.126.1 vs. uniprot
Match: A0A7S2ALG2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2ALG2_9STRA) HSP 1 Score: 55.8 bits (133), Expect = 6.860e-5 Identity = 32/45 (71.11%), Postives = 40/45 (88.89%), Query Frame = 2
Query: 632 KKQQRMIRNRESAALSRKRKRDRIESLEEQVARLAEENRGLRHRL 766
KKQ+RMIRNR+SAALSRKRK DRI SLE++VA L EEN+ LR+++
Sbjct: 137 KKQERMIRNRQSAALSRKRKADRISSLEKRVAFLEEENKSLRNQI 181
BLAST of mRNA_P-littoralis_Contig117.126.1 vs. uniprot
Match: A0A4D5RKW3_IXOSC (Putative cyclic-amp-dependent transcription factor atf-6 (Fragment) n=5 Tax=Ixodes TaxID=6944 RepID=A0A4D5RKW3_IXOSC) HSP 1 Score: 57.8 bits (138), Expect = 7.440e-5 Identity = 37/79 (46.84%), Postives = 53/79 (67.09%), Query Frame = 2
Query: 566 KPDFAMLQAEALLAPGVDKQAWKKQQRMIRNRESAALSRKRKRDRIESLEEQV-------ARLAEENRGLRHRLAKYEA 781
KP F A A+L P D +A K+QQRMI+NRESA LSRK++++ ++ LE +V +RL+EEN LR R+++ EA
Sbjct: 114 KPSFLFANAAAMLNPSNDNKALKRQQRMIKNRESACLSRKKRKEYLQKLELEVRDLTNENSRLSEENIHLRQRVSQLEA 192
BLAST of mRNA_P-littoralis_Contig117.126.1 vs. uniprot
Match: A0A6P7V727_IXOSC (cyclic AMP-dependent transcription factor ATF-6 alpha isoform X1 n=5 Tax=Ixodes scapularis TaxID=6945 RepID=A0A6P7V727_IXOSC) HSP 1 Score: 57.8 bits (138), Expect = 8.730e-5 Identity = 37/79 (46.84%), Postives = 53/79 (67.09%), Query Frame = 2
Query: 566 KPDFAMLQAEALLAPGVDKQAWKKQQRMIRNRESAALSRKRKRDRIESLEEQV-------ARLAEENRGLRHRLAKYEA 781
KP F A A+L P D +A K+QQRMI+NRESA LSRK++++ ++ LE +V +RL+EEN LR R+++ EA
Sbjct: 275 KPSFLFANAAAMLNPSNDNKALKRQQRMIKNRESACLSRKKRKEYLQKLELEVRDLTNENSRLSEENIHLRQRVSQLEA 353 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig117.126.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig117.126.1 >prot_P-littoralis_Contig117.126.1 ID=prot_P-littoralis_Contig117.126.1|Name=mRNA_P-littoralis_Contig117.126.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=564bp MAPFDMLSCGGGGSGGEGGDGSSNAYDSGSRRSSATHGHSSIRRPSCEDAback to top mRNA from alignment at P-littoralis_Contig117:378973..385021+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig117.126.1 ID=mRNA_P-littoralis_Contig117.126.1|Name=mRNA_P-littoralis_Contig117.126.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=6049bp|location=Sequence derived from alignment at P-littoralis_Contig117:378973..385021+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig117:378973..385021+ >mRNA_P-littoralis_Contig117.126.1 ID=mRNA_P-littoralis_Contig117.126.1|Name=mRNA_P-littoralis_Contig117.126.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1692bp|location=Sequence derived from alignment at P-littoralis_Contig117:378973..385021+ (Pylaiella littoralis U1_48)back to top |