mRNA_P-littoralis_Contig116.17.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_P-littoralis_Contig116.17.1
Unique Name	mRNA_P-littoralis_Contig116.17.1
Type	mRNA
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))

Homology

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BLAST of mRNA_P-littoralis_Contig116.17.1 vs. uniprot
Match: D7FWP1_ECTSI (HIT domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWP1_ECTSI)

HSP 1 Score: 275 bits (704), Expect = 3.220e-83
Identity = 136/183 (74.32%), Postives = 149/183 (81.42%), Query Frame = 2

Query:  146 MGKFSESVSGWFRKGSQPVDEDILSKGVVWNARGEMQSCLFCDFAQHSKEKELLFEDDLVAAFAPKKPAAKQHILVIPKKHISTVGDLVEADTAVLDRMKSVADGLLKCDASDIQYSFHIPPWNSIDHLHLHAFETPFLSWWQELRFSQGKPWCASFERVRIWASGAGGAGEGPAA-ETKDEE 691
            MGK SE    W  +  +P D+DI+SKGVVWNARGEMQSCLFCDFA H+KEKELL+EDDLV AF+P KPAAKQHILV+PK+HISTVGDLVE DT +LDRMK VA  LLKCDAS  Q SFHIPPWNS+DHLHLHA ETPFLSWW  LRFS+GKPWCASFE VR WASGAG   E  +  ETKD E
Sbjct:   17 MGKLSE----WLTRKQRP-DDDIVSKGVVWNARGEMQSCLFCDFANHTKEKELLYEDDLVIAFSPLKPAAKQHILVVPKRHISTVGDLVETDTPLLDRMKEVAVKLLKCDASQTQLSFHIPPWNSVDHLHLHALETPFLSWWNGLRFSEGKPWCASFEGVRYWASGAGAQEEKESVPETKDAE 194

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BLAST of mRNA_P-littoralis_Contig116.17.1 vs. uniprot
Match: A0A835YJP7_9STRA (HIT-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJP7_9STRA)

HSP 1 Score: 120 bits (301), Expect = 1.240e-27
Identity = 68/156 (43.59%), Postives = 93/156 (59.62%), Query Frame = 2

Query:  215 LSKGVVWNARGEMQSCLFCDFAQHSKEKELLFEDDLVAAFAPKKPAAKQHILVIPKKHISTVGDLVEADTAVLDRMKSVADGLLK---------CDASDIQYSFHIPPWNSIDHLHLHAFETPFL-SWWQELRFSQGKPWCASFERV--RIWASGA 646
            ++KGV ++A  ++ SCLFC+FA+ +  K LLFEDD   AF P   AA+QHILV+PK HI TV DL   D ++   M+ VA   L           D  DI+ ++H PP+NSIDHLHLHAFE PF  +    ++++    WC   E V  R+ A+ A
Sbjct:    9 VAKGVTYDADNKIISCLFCNFARRTDAKPLLFEDDHCVAFLPLDIAAEQHILVVPKTHIKTVNDLRTEDASLAAHMRQVATATLTQQAAAQARTLDPRDIRLTYHAPPFNSIDHLHLHAFEMPFAKNPLLSIKYAPWALWCKQHEDVERRLTAAAA 164

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BLAST of mRNA_P-littoralis_Contig116.17.1 vs. uniprot
Match: A0A0G4H898_VITBC (HIT domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4H898_VITBC)

HSP 1 Score: 110 bits (276), Expect = 3.740e-23
Identity = 65/190 (34.21%), Postives = 95/190 (50.00%), Query Frame = 2

Query:  194 QPVDEDI-LSKGVVWNARGEMQSCLFCDFAQHSK-----EKELLFEDDLVAAFAPKKPAAKQHILVIPKKHISTVGDLVEADTAVLDRMKSVA---------------------DGLLKCDASD-IQYSFHIPPWNSIDHLHLHAFETPFLSWWQELRFSQGKPWCASFERVRIWASGAGGAGEGPAAET 679
            QP+ + + L K V +   GE+  C+FC  A   +     +  +L+ED+ V +FAP++PA+  HILV PKKHI     L  +   +LD M+ V                      D +      D +Q+SFH PPW+S+DHLHLH F  PF+S    +++ Q   WC S++ +R  A     AGE   A T
Sbjct:   46 QPIFQPVGLYKSVTYGEYGEVLKCVFCRIASGEELPANGKGSVLYEDESVISFAPREPASLVHILVCPKKHIRNCRTLDSSHVPLLDHMRRVGQQVAADEFAKTRTRKKGSRSHDSMAGTPFDDRLQFSFHAPPWHSVDHLHLHCFVKPFISPVLWVKYRQDTSWCVSYDAIRSEAESIAAAGEATTAAT 235

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BLAST of mRNA_P-littoralis_Contig116.17.1 vs. uniprot
Match: A0A565AVM8_9BRAS (HIT domain-containing protein n=1 Tax=Arabis nemorensis TaxID=586526 RepID=A0A565AVM8_9BRAS)

HSP 1 Score: 102 bits (254), Expect = 3.940e-21
Identity = 53/130 (40.77%), Postives = 76/130 (58.46%), Query Frame = 2

Query:  254 QSCLFCDFAQHSKEKELLFEDDLVAAFAPKKPAAKQHILVIPKKHISTVGDLV--EADTAVLDRMKSVADGLLKCDASDI--QYSFHIPPWNSIDHLHLHAFETPFLSWWQELRFSQGKPWCASFERVRI 631
            Q+C+FC   ++     LL  DD V AF   KPAA++H LVIPK+HI TV DL   + D +++  M SV   LL+ DA     ++ FH PP+NS+DHLHLH F  PF+  W+ +++    P+    E   +
Sbjct:    6 QACIFCQIVRNPTSTRLLHTDDKVVAFQDIKPAAQRHYLVIPKEHIPTVRDLQRRDEDYSLVSHMLSVGQALLQTDAPQTIHRFGFHQPPFNSVDHLHLHCFALPFVPRWKAIKYKSLGPFGGFIEAATL 135

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BLAST of mRNA_P-littoralis_Contig116.17.1 vs. uniprot
Match: A0A225WA02_9STRA (HIT domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WA02_9STRA)

HSP 1 Score: 102 bits (254), Expect = 5.640e-21
Identity = 51/146 (34.93%), Postives = 85/146 (58.22%), Query Frame = 2

Query:  221 KGVVWNARGEMQSCLFCDFAQHSKEKELLFEDDLVAAFAPKKPAAKQHILVIPKKHISTVGDLVEADTAVLDRMKSVADGL---------LKCDASDIQYSFHIPPWNSIDHLHLHAF--ETPFLSWWQELRFSQGKPWCASFERV 625
            KGV ++  G+++SC FC+  +   E   L+ED+ V  F P +P    H+L++P+ HI  V  L      +L RM  VA+ +         L+ +A D++YSFH+PP+NSIDH+H+HAF  +   L ++  +++     WC S+++V
Sbjct:   31 KGVRYHRDGQVRSCRFCEILRMGTEP-FLYEDEHVVVFRPLRPIVPSHVLIVPRAHIRNVNRLAARHRELLARMHRVAEAVMTAENRECELQPEAPDVRYSFHVPPFNSIDHVHMHAFHDDPRSLGYYGRIKYRTESWWCRSYDQV 175

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BLAST of mRNA_P-littoralis_Contig116.17.1 vs. uniprot
Match: K3XBI6_GLOUD (HIT domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XBI6_GLOUD)

HSP 1 Score: 105 bits (261), Expect = 9.260e-21
Identity = 64/179 (35.75%), Postives = 95/179 (53.07%), Query Frame = 2

Query:  221 KGVVWNARGEMQSCLFCDFAQHSKEKELLFEDDLVAAFAPKKPAAKQHILVIPKKHISTVGDLVEADTAVLDRMKSVADGLLKCD---------------ASDIQY--SFHIPPWNSIDHLHLHAFETPFLSW--WQELRFSQGKPWCASFERVRIWASGAGGAGEGPAAETK--DEET 694
            KGV +   G +  C FCD   H K++E L+EDD++A F P  P  + HILV+P+ HI  V  L +    +L RMK VA+ +L+                 +SD+ Y  +FH PP+NSIDH+H+HAF     S+  +  +++     WC SF++V +   GA   G  P +  +  DE T
Sbjct:  146 KGVKYGRDGAVVCCRFCDIL-HKKDEEFLYEDDMIAVFRPLSPVVESHILVVPRCHIRNVNMLTQDHVQLLSRMKQVAETVLRAMPPSXXXXXKPESSAVSSDVDYKFAFHTPPFNSIDHVHMHAFRKNEGSFGCFGSIKYRTETWWCRSFDQV-VTRLGATSVGPAPRSSRRPSDEST 322

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BLAST of mRNA_P-littoralis_Contig116.17.1 vs. uniprot
Match: F0W4R8_9STRA (Uncharacterized protein AlNc14C18G1889 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W4R8_9STRA)

HSP 1 Score: 103 bits (258), Expect = 9.800e-21
Identity = 53/147 (36.05%), Postives = 85/147 (57.82%), Query Frame = 2

Query:  221 KGVVWNARGEMQSCLFCDFAQHSKEKELLFEDDLVAAFAPKKPAAKQHILVIPKKHISTVGDLVEADTAVLDRMKSVADGLLK---------CDASDIQYSFHIPPWNSIDHLHLHAFETP---FLSWWQELRFSQGKPWCASFERV 625
            KGV +   G + +C FCD     ++ E+L+ED  +A F P  P A  HILV+P+ HI  V +L  A  ++L RM++V + +L           D+   +++FH+PP+NSIDH+H+HAF TP    ++    L++     WC S+E++
Sbjct:  133 KGVTYAEDGSVVNCRFCDILLLKQKTEILYEDAFLAVFRPLTPLAATHILVVPRCHIRNVKELTIAHRSLLQRMRTVGEYVLSQQTQTQTISSDSETNKFAFHLPPFNSIDHVHMHAFRTPRNTSVNSLHALKYCTETWWCQSYEKI 279

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BLAST of mRNA_P-littoralis_Contig116.17.1 vs. uniprot
Match: UPI000901EB4C (bifunctional adenosine 5'-phosphosulfate phosphorylase/adenylylsulfatase HINT4-like n=1 Tax=Camelina sativa TaxID=90675 RepID=UPI000901EB4C)

HSP 1 Score: 99.4 bits (246), Expect = 1.340e-20
Identity = 53/125 (42.40%), Postives = 75/125 (60.00%), Query Frame = 2

Query:  239 ARGEMQSCLFCDFAQHSKEKELLFEDDLVAAFAPKKPAAKQHILVIPKKHISTVGDLV--EADTAVLDRMKSVADGLLKCDA--SDIQYSFHIPPWNSIDHLHLHAFETPFLSWWQELRFSQGKP 601
            A G  Q+C+FC+   +     LL  D+ V AF   KP+A++H LVIPK+HI TV DL   + D +++  M SV   LL  DA  S  ++ FH PP+NS+DHLHLH F  PF+  W+ +++    P
Sbjct:    2 AGGTNQACIFCEIVHNQTSTRLLHTDEKVIAFQDIKPSAQRHYLVIPKEHIPTVKDLQRRDEDYSLVKHMLSVGQDLLHKDAPQSIHRFGFHQPPFNSVDHLHLHCFALPFVPRWKSIKYKSLGP 126

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BLAST of mRNA_P-littoralis_Contig116.17.1 vs. uniprot
Match: V4MRG4_EUTSA (HIT domain-containing protein n=2 Tax=Eutrema salsugineum TaxID=72664 RepID=V4MRG4_EUTSA)

HSP 1 Score: 99.4 bits (246), Expect = 1.410e-20
Identity = 52/123 (42.28%), Postives = 75/123 (60.98%), Query Frame = 2

Query:  245 GEMQSCLFCDFAQHSKEKELLFEDDLVAAFAPKKPAAKQHILVIPKKHISTVGDLV--EADTAVLDRMKSVADGLLKCDASDI--QYSFHIPPWNSIDHLHLHAFETPFLSWWQELRFSQGKP 601
            G  Q+C+FC   ++     LL  D+ V AF   KPAA++H LVIPK+HI TV DL   + D +++ +M SV   LL  DA     ++ FH PP+NS+DHLHLH F  PF+  W+ ++++   P
Sbjct:    3 GANQACIFCQIVRNPSSTRLLHTDEKVIAFQDIKPAAQRHYLVIPKEHIPTVRDLQRRDEDYSLVSQMLSVGQELLLKDAPQTIHKFGFHQPPFNSVDHLHLHCFALPFVPRWKAIKYTSLGP 125

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BLAST of mRNA_P-littoralis_Contig116.17.1 vs. uniprot
Match: UPI000CED3250 (bifunctional adenosine 5'-phosphosulfate phosphorylase/adenylylsulfatase HINT4 isoform X1 n=1 Tax=Eutrema salsugineum TaxID=72664 RepID=UPI000CED3250)

HSP 1 Score: 99.4 bits (246), Expect = 2.810e-20
Identity = 52/123 (42.28%), Postives = 75/123 (60.98%), Query Frame = 2

Query:  245 GEMQSCLFCDFAQHSKEKELLFEDDLVAAFAPKKPAAKQHILVIPKKHISTVGDLV--EADTAVLDRMKSVADGLLKCDASDI--QYSFHIPPWNSIDHLHLHAFETPFLSWWQELRFSQGKP 601
            G  Q+C+FC   ++     LL  D+ V AF   KPAA++H LVIPK+HI TV DL   + D +++ +M SV   LL  DA     ++ FH PP+NS+DHLHLH F  PF+  W+ ++++   P
Sbjct:    3 GANQACIFCQIVRNPSSTRLLHTDEKVIAFQDIKPAAQRHYLVIPKEHIPTVRDLQRRDEDYSLVSQMLSVGQELLLKDAPQTIHKFGFHQPPFNSVDHLHLHCFALPFVPRWKAIKYTSLGP 125

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig116.17.1 vs. uniprot

BLAST of mRNA_P-littoralis_Contig116.17.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FWP1_ECTSI	3.220e-83	74.32	HIT domain-containing protein n=2 Tax=Ectocarpus T...	[more]
A0A835YJP7_9STRA	1.240e-27	43.59	HIT-like domain-containing protein n=1 Tax=Tribone...	[more]
A0A0G4H898_VITBC	3.740e-23	34.21	HIT domain-containing protein n=2 Tax=Vitrella bra...	[more]
A0A565AVM8_9BRAS	3.940e-21	40.77	HIT domain-containing protein n=1 Tax=Arabis nemor...	[more]
A0A225WA02_9STRA	5.640e-21	34.93	HIT domain-containing protein n=1 Tax=Phytophthora...	[more]
K3XBI6_GLOUD	9.260e-21	35.75	HIT domain-containing protein n=1 Tax=Globisporang...	[more]
F0W4R8_9STRA	9.800e-21	36.05	Uncharacterized protein AlNc14C18G1889 n=1 Tax=Alb...	[more]
UPI000901EB4C	1.340e-20	42.40	bifunctional adenosine 5'-phosphosulfate phosphory...	[more]
V4MRG4_EUTSA	1.410e-20	42.28	HIT domain-containing protein n=2 Tax=Eutrema sals...	[more]
UPI000CED3250	2.810e-20	42.28	bifunctional adenosine 5'-phosphosulfate phosphory...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig116	contig	P-littoralis_Contig116:81491..91996 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	1
Start	1
Seed ortholog	2880.D7FWP1
PFAMs	DcpS_C
Model size	2791
Max annot lvl	2759\|Eukaryota
Hectar predicted targeting category	other localisation
Exons	2
Evalue	8.17e-93
EggNOG OGs	COG0537@1\|root,KOG4359@2759\|Eukaryota
Ec32 ortholog description	Histidine triad (HIT) protein
Ec32 ortholog	Ec-06_001390.1
Description	nucleoside phosphate binding
Cds size	555
COG category	FG

Relationships

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680789478.6119654-UTR-P-littoralis_Contig116:81490..81635	1680789478.6119654-UTR-P-littoralis_Contig116:81490..81635	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig116 81491..81635 +
1680789478.6516387-UTR-P-littoralis_Contig116:89905..91996	1680789478.6516387-UTR-P-littoralis_Contig116:89905..91996	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig116 89906..91996 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680789478.6218884-CDS-P-littoralis_Contig116:81635..82014	1680789478.6218884-CDS-P-littoralis_Contig116:81635..82014	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig116 81636..82014 +
1680789478.6382725-CDS-P-littoralis_Contig116:89729..89905	1680789478.6382725-CDS-P-littoralis_Contig116:89729..89905	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig116 89730..89905 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig116.17.1	prot_P-littoralis_Contig116.17.1	Pylaiella littoralis U1_48	polypeptide	P-littoralis_Contig116 81636..89905 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at P-littoralis_Contig116:81491..91996+
coding sequence from alignment at P-littoralis_Contig116:81491..91996+

protein sequence of mRNA_P-littoralis_Contig116.17.1

>prot_P-littoralis_Contig116.17.1 ID=prot_P-littoralis_Contig116.17.1|Name=mRNA_P-littoralis_Contig116.17.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=185bp
MGKFSESVSGWFRKGSQPVDEDILSKGVVWNARGEMQSCLFCDFAQHSKE
KELLFEDDLVAAFAPKKPAAKQHILVIPKKHISTVGDLVEADTAVLDRMK
SVADGLLKCDASDIQYSFHIPPWNSIDHLHLHAFETPFLSWWQELRFSQG
KPWCASFERVRIWASGAGGAGEGPAAETKDEETG*

mRNA from alignment at P-littoralis_Contig116:81491..91996+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_P-littoralis_Contig116.17.1 ID=mRNA_P-littoralis_Contig116.17.1|Name=mRNA_P-littoralis_Contig116.17.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=10506bp|location=Sequence derived from alignment at P-littoralis_Contig116:81491..91996+ (Pylaiella littoralis U1_48)
CCGAGAACCGAATAACTTTGAGAGCTAAAGGGCCAGCGAGTGAGCGAGCA
ATCAAGTAGGTCAAAAACCCTCCAAAGTATAGCCGGCTGTGCGTGTGCTT
GATCCTTCCGGCAAGGGGACTGGGAGTTACCACTCTAGCAGCAGGATGGG
TAAGTTTTCTGAGTCGGTCTCGGGTTGGTTCCGCAAAGGAAGTCAGCCCG
TTGACGAGGACATCCTGAGCAAAGGGGTAGTCTGGAACGCCAGGGGAGAG
ATGCAGAGCTGTCTATTCTGCGACTTCGCGCAGCATTCCAAGGAGAAGGA
GCTCCTGTTCGAAGACGATCTTGTGGCAGCCTTCGCGCCGAAGAAACCCG
CAGCGAAGCAGCACATCCTGGTGATCCCGAAGAAGCACATTTCGACCGTT
GGTGACTTGGTCGAGGCTGACACCGCGGTGCTGGATAGGATGAAGTCGGT
AGCAGACGGGCTCCTAAAGTGCGACGCCTCGGACATCCAGTACAGCTTCC
ACATACCCCCCTGGAACAGCATCGGTGAGCTCAAGCCCTGGCGAGAGCCA
TGGTTTGCTTGCCAACGAAGCCTCGACAATCAATTTTTGCAAAAACATTT
CGCGCGCCAGATGCAACAACAACAGCCCGCACGTGAATCACCGGTATGGG
ATACAGGGTATAATTGAGGATAGAGAGGATGAGAGGTGAACGTCGGAACG
GAGTTGCATTGGTAGCAGGTGAACAGGTGATGGTAGGGGCGCCTTACTTT
TGCCGGGCATCTTTTGACCGGCCTCTGCGCTTTTGTCCCTCTCCAGGTAC
CATTCATTTTCATTAGGAAAAGCTTTGACGTATGAAACGGGTTGAACTTT
AATGGCAACGCTGCACTACGTGCTGCACCTACCTGCCACTACTGTTCTGT
TTCACTTTCCTTCATCGTGCAAGTCAGCAGTAGGAAAGACTTACGTACAG
CGGTGCAAGCAGGCAGGGATGAGCAGGGATTCACGCATAATTCAGCACAT
GAAAGCAAACAAAGCTCGACTCGAAAAAAGTCGACGCAAGAAAGGGACAA
TCGAGCCCTCCTCGCGATAAAAATTAAGTCTCAAGCACGGCAGCAGAAGA
AAGGGGGAGAAAAAAGGGCAGACGTCAGAAAGCGGTGTGCCGCCTGGAAT
CCGCGGCACCAAGCGGTACACCAAAATACACCTGGGCATTTGAGCCCCGT
CCTCACTGATTGGCCGATTAAGCCTCTTAAAACGGTTTTATGGGACCAGC
AGTCGGCGGTTAATTACCTCCGGGCTTTCTCAGGTCGGCTGTCACCGTTT
TTTGGCGCGAACAGCAGCGCCGCTATCTGGCGGGATGTGATATTCCCCAG
GCCATTCGCCCAAAATCGTGTGACACTTCCAAATCACACATCAAATTCAA
TCAACCAAGGACGCCACGTTGCATCGTTCCAGATTTTAACCACACATGAC
CACTAAATATACAGACCCCATGGGCCCGTTGTCGGTGAAGAACCTGTGGG
CACGTTATCTGCCGCGGCTCCTTCGGGATTCTTCGAGACCTTTAGGCTGA
TTCTTGACAGCGAAATCAAAACCGAACATCGAAACCGAAGTTGATGATAA
GGCTACATCTTATGTGTCAGAACCGTCCATTTATTTTTATTTTATTTGGC
TGTGTTGAACATTAGCCCAAAACGGAGCATCTTATGTGATCAGAAACAGC
CATTTTAGACAGCGACTTTTCGAATAATTTTTTCCGGTAGCCCCAAACGA
TAGAAAAAATTATTTTTCTGATAGCCTGCAGCTATCGGAAACCTGTTACC
AAGGCGTTTGAACAACCCAAGTTACAGTCAGCCTTGCATGATGAGATGCC
CTGAAAACTTTGTTTTGGTAGCCTATCGATTCCTCGCGGCCTTTGATGAC
CGACGCAGGAGAAGGATCATACATACACCTCACGGCCGATGGCTTTAGTA
TTACTGTGGGTTCTTTCGTTCGAGAGCAATGAACCAAAAACCAAAATGGG
TCGGACGAGAGCTGGCAGCTAGCTGATGATGCTGCTGCTGCTGTCCTCTG
AACTCTTCAACCAGCAGCAGCTTTTTTTGCCGCCACACCAGTTTGGTGTT
TTGCTGATTGCTCTCGAACGAATGAGGCCACAGCAATGGTAAAGACATGC
CTCGCGAGCTGTGAACATGGCCTCTCTCCTCCAGTGGTCCTCTGAAGCAG
CGAGGCATCGATAGTCTGGCGTAGAAGGATTGCAAGAATTGATGGCCAGT
GGAAAAAAGAAGAAATCGCCACCGCCTACCTGCTGGTTGTGACCTGCATT
GACTTTTTTTCGTTTCTTCACACGTCATCGATGATGCCTGCAACCTTTTT
TCGCTAGTCTATCGATACCTCGCGGTCTTATATAACCGCGGGAGAAGAAG
AACCATATACCCAGCTCGCGAGGCATGTCCTCACCATTACTTTGGCTTTA
TTCGTTCGATAGTGGTGGACGAAAGAGCGAACCGGTTACAGCAATGTGAG
ATGAGAGTCAAGTTGGCTACCATCACAAACCGCCCCAGCCGAACAGGATA
GACTTTTTTTTCGGGAGTTTTCAAATAAAATAAAACCACCTGCTGTTCGG
TTTTGACACATGATATCGGGTCCTTCAACAGAGCCTGTTGGAAACGTCAT
TATTCGCACGGCCCAAAAGGAATAGTGGCGTTTTTGACACGTAAGATGTG
CCTAAGTCCAATAGATCCATCTCATTTCTGGTTTCGATTGCCAGGTGTCC
TAACCAAAATAGCCGATATCGAAATCAAAATTAAACAACGGGAATTCGAA
CAGCTTTTGGTTCCTACAAGTAAAAACTGTAGACGTGGCGACAGCAACAA
CAGCAGCAACCCCGTCGCACATGCACGCGGCAGCATGGTGTGTGTGTGGT
GAAGAGCAGGGGCTTGCACGGATGACCAACTGGCAGCAGAGCCAACCCTC
CTTGTTTTGTGTGCAATCGTAAAACATCATTCGTATCCCACCTCAACAGC
AGTACTGCTACTACTACTACTACTGCTGCTGGTGCTGGTGCTCCTGCGGT
GGCGCAAAATAAACACATTTTGTGCATGGATCAATCTATCTACTGTCTCT
TCTGTTTTTAGACTCCCTACAAAATATCAACTGCTGTTGGTGGTGGTGGT
CTGGTGTAGTTGTTGTCCGTTGACATCACTTCAGCAGCAGCGAGGAGAGC
TCTGTGCATGCCCGTGGTGGCTTGTATCATGCGTTTTGTCCTACCGCTGC
TGCTTGCTGCCTCTTCAGCATATGAGACGATGTGGGACGATGTAGCGTGA
CTTTCTTGGTTGATTGAATTTGATGCGTGATTTGAAAGTGTCACAGGCTT
TCGGGCGAATGGCCTGGGGATTATCCCGCCAAAAAGCGGTATTGGTCGAA
CAAAAAAAAACAGAATAGACGACCTGAGAAGCCCGGATGTGATGTTGCGC
CGACTGCTGGTACCTCAAAGCGTTACGAGGTTTATTTGACCAATCGGCGA
TGCAGACGGGGCTCAAATGCACGGGTGTATTTTGATGTACCGCTCTGTGC
CGCGGAAATCAGGCGGTATACGCTGTCTGGCGTCTCTCCCCCCAAAAAAC
TAGAGGCTCCTGTGTTCACCTGCCACTTATGTGACCCCGGCTTGTGCGCT
CGAGTTACACGGAAAGGTGCACACTGGCGTTCAGAAAAGGTTGAATGACA
ACACACGCTAAACAAGTGTACCATGCCGTGTAGACACACACAGCAGCCGA
CCTTACATACCGTAGTGTGCTGCGGCTCTTGAGGCTAGCACGTACAGGGG
CTGACAGATGGTCTGGCGCATGCAGCGGTTCCACCTCCCACCGCCGAAGC
TGTAGTAGTCCTACAGTCCAGGCAGAAGGATTTTTCCAAACGGGGTACCG
TTTTTTTCTCCATCATTTTAAGGAGTTGACAGGTGAAACAAACTTTTCCA
GAATCGCGCGGCCGAGAGGAACCCAATACCAGTTTTAAAAAAAATTCCAT
GAACAATGGCCATTTTCGACCTTTTTTTTTTACCTTTTTTTACCTTTTTT
TACCTTTTTTATCCTTTCTTTTTTATCCTGAAACCGCAAAAAAAAATGCC
CCTAATCGAAACTGAATTAACCCGAATCCACCACCCAATCCATGACCGAC
TTGTCGAGAAGACACTTCGTGATAGCGAAGCAAGGTACTGCTGTAGTTCT
ACATATATATTTAAATACATATCATATACTAGCAGAGATTGGAACGATTT
TTAATGTGAAGAAAACACACACACACAGCAGTAGGTAATATACCTGGTAT
ATATATAAAAGTAAAATACACAACATCAACTTTGTGTAGGAGCCGACGCC
ACCGTCTCCAAACTCGTGTCCAAGCGCGAGTCGTTCAAGTGCTTTAATTA
TTTGTTCAAGTGTTTCATAGTCTATCCTGGCTTCCCGCGAGGCTGCAAGT
GCCGTCTCCTCGTTTTTCTTGCGCTCCTCGGGTGATGCGGCCGTGCTCTT
TGCCATCAACACGGCATCAACCCGATCAGTAGATCTCGAGCCACACGCGC
AGCCCTCTTGTTCTCTTTCCGCTTCGCTTCTTTGCGTGCCATCCACCCTC
GCCGGTCTCTCTTCTTCCCACGATTAGGTAAAGTCTCGTTGGTCCAGCTC
TCAGGTCTCCTTGTTGGTCGCCCCGAGCCCCCTGGGAGACCTGTGGGTCT
ATATTTGGGTTGCTCGAAGTAGCGTGGGGCAGGCTTCGACGAGGTGGTCT
GACGTGTTGCAGGAGCGGGGTTCTTGTTCGCTGCTGGTGTCTGTTGTTGC
TCTTGCCCGCGGTCTTGATCCTCCTCCTCCTCCTGCTGCTGCTGTTGCTG
CTGCTGTTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTTGCTGCTGCC
GCTGCTCCATCTCACTCGCCCCTGCTGCAGCATCATCGTTCCAATCGGGA
TCTCCAGATGACGATTCCCCGTCCGCATAACCAAACACCATACCCTCCGA
TGCGGAGCTTTCTTCACAAGCAGGCCCGAGGTCCACACGAGACATGTCGT
CACCTCCAACCCAGTCGGCAAGGGCGTTAGTGTGGTCGGCACCCTCGCCA
CTCTTACCACCGCAGTCCGACTCGAAGCCGAGGTCTATCTTGAAGTCCAT
GGGTGACGACAGTCCCGTCCCAATTGCGCCGCTTTCATCATCTGCGAGGG
CAGGCAAGAGTGGGAAGTCCGTCGTGGGAACGGGGAGAAGATCAGGGACG
GGAGAGAAGAACGATACCATGGACTTCTGACCTCTCCATCGCTCCTTGAG
TTTGCGCCGTCGGGTAGACCTTTCGCTAGTCCCATCCGCCGCCCTGCCAG
TCAGCTCGCTGTCTTGGTCTGTGTCAGTGAACTCAGCATCGGCTTGGTAC
GCAAGGTGCTCAGCACGTTCGCCATCCAAGTCCACGTCATCACGAGCGGG
CGGGGCGAACTTTGCTTTCGCAGTGAAGGCGTACTTCTTCTTTGGTGGGC
GCCCGCCGGGCATGGTCCTCGTGTGTGGGTGTGTGGGTGTGTACACCAGT
ACATCAACGTGTGTGTGCCACCTGGTGTATACTTGGTGGTTGTGCCCTGT
TGGTACTCTAACTTCAAGTGTTAATTATTCAAAAAAAAAACTGAGGGCGC
CATTTTTTACAACGGCTTTTCTCGGCCCACAGATTATTTTCAAAAAAAAA
AAAATGGTCCTGGGTACAGGTCCAATTCATCCGAATCCGAGAAGTTTTTC
GACATCCATCGTGCCAGTTTTGCGCTAAAATCTCCACAGCTGGAGCAGGG
AAAAAGTGGATTTTTCGCCCATATCTCGCTTAAAAATAGATAAAAAAAGA
ATCTGCTTCGACAGGAATCTGCCCCTGGTCGAGATACGTTCAAAACCGGT
GTCAATAAAAAAGATGACACCTGTGTCGACCTACAAAATCTTGACCAATT
TTTATCGAAAAAACGAATTACTCCGACGCAACGATGAAAAAAAAAAATCT
GCCACGATGGTTCGATCCGTCTGAAAGAGAGTTTTCCGTCGATATATTTT
ATGTCTTGTAAAAGTAAGTGACCACCTCAAAACAACTCAATATATAAATG
TCGAACTTTTGGAAAAATTCTTCTGCCTGGACCATACTGACAGAGAGAAA
ACACAAGTTGGTTTCGCGTATGTGTGTGTGTATCGTGGACACGCAACACA
CAGCAGCAGCCGTATAACAAGTGTTTTGCAATTAATCTTAAGACACTAGG
GTCCGACCCACCGGCACGAAGGAAGGGATCAACGCTGCTGGAAGAGTAAA
ACACTAGTTTTTCGTCACGTGTTTGTCGTTAGTGCTTGTATGCTTCTTTC
GACACACACGAGTAAAATCCTGCCTGCTGCACGCACAAGACAGCAATTTC
GGGACAAGCGGACGGACGGGCGAACGAACACACCCTTTGCAGCTTTCTTT
TGTCTCTGCTGGATATATTCATGCAATCCTGTAGCTCGTACGAGCAGAGG
AGACAGAGGCACACAGCACCCGTAGACCACACTCACTCGCGCAGTGCCTC
TGGTGGTACGCACTGAAACTCAACTAGAAAATTATGAGAGGCATCATGAC
GCTACTGTATGTCATTCATCACAGGGACGTTGCTCACAAACAATTCGATA
CCTGATTGGCCAAGCTTGGACCCTGGGATCACGGGATCACCTGAACATGC
GAGGCGGTTGTGGCTCCCGCTCCTTGAAGCTCCGGCAGCCGAAAGTCGCC
CCTACCAGCAGACGCCGGTACACGAAACACTTAGATGAGGGATCCAGAAG
TTGCTCGCAATGCGCAGAAGCAGGAGCTGGCGCCCCGAGTGCACTGCGAG
TTTTGCGCGTGGCGTTCGACGGGGGCTTTCGAACGCCAGAGGTGCTGCGG
TTCCTCAGCGCGCCTACAGCACATGGTTCGAAGCCGCTGGCGCAGCGAGC
GTCCGAAATCAGCACACGAGGCTCGCAGGGACGGGTCGGTACTTTCCGGA
GTAGCCATTGGCAGGCGAAGAAATCTCGCGCATTTCTTTGATTTCGGAGT
TTCGAGCCAATAGTGAAATGACGAGCTAACAGAGCTCTACAAGTAGAGGG
TCGAAAAAGAGCCCACTGCCCATTTTACGAAGGCGCCAGCGCAGCGAGCA
CGCGGATCCAGCGTGCGAAACTCGGAGGGACGGGTCGATACGTCGCGGAG
ACGCAGCATGCAAAGAAACCGCGCGCTGATCCATTTTGATTTCTTCCAGA
GATCTGAGCGGAAAGTGACGATTTTGCGGAGTGCACGATTGGTTGTCATA
GATATACTAAACACCACCCTATGTTGCCCTCCCTCCCGTGTAACCCCGGC
TGATGCACCCACATGCCTGGTACATGTATAAAGGTACGGACTGGCACCCA
AAATATATAGGATGACACATATAACACACACTACCTGCATGACATTAATA
TGCGTTCATTGGGTCTACTGTTGGGCGAATGTCTTTCCAAAGTCGCGTGG
CACCACATATGCCCGGCAAGAGCAGTTGGCATACAAGCACGAATGAGGTG
GTCGAACGCAAAATGATGGCCTTTTTTCGTGATGCCACTGCTTGACGAGA
ATGGCACAGACAGTACACGCCGCTGTGCTCTCTTTGCGAGGGGTTTTCTA
GCATAGCGCTCCGCATTTTTGATGGGGGTGTATGTATTGTTGATCAGAAA
ACATTTCCTTTTTTTTCGGAAATGATTCTGTTCGTGAGCCTGCTCCGTGC
CCTCACACAACGAATTGGACCCTCCCGTTGTTCGTGGCTTCAATTTTCGC
ACGTAAGCGATCATAATTATTCCACAAATAGTTCGACGGCGACGCCCGAC
CACTCCTGATACCGTCGAGCTCCCGCAGCGCTATTTGCAACCCAGAATAT
CGGAAGACCAGCGCATCGTTTTAGCCCAGCTACGTCCACGTGGAAGCACA
ACGAAAACGAACGTTTGGCGCACAAAGTTATATCGTATGTTTGATGGTCA
AGTCAGCTTCGGGCAAGATTCTTCCGAAGTCCTTGTGGCAAGTAGTGATG
AAAGAATTGGCATGCATATGATAGCAGCAGAATATTATTTTTCATCTTGA
AGATCAACAGGGATATGTGTCACACGAAAACCTTGACTAATCGCGATATG
TGCTGCATATTGCCTCCCTCTCTGGTCCTCGCCGTCTCATCCCGCTGTCG
TTGTCGTCCACCCTGCACACACACGCACACACACTCAAGACCATCTTCAT
CTCCACGCGTTCGAGACGCCGTTTTTGTCGTGGTGGCAAGAGTTGAGGTT
TTCACAAGGAAAGCCTTGGTGCGCTTCCTTTGAGAGGGTCAGGATCTGGG
CTTCGGGCGCAGGAGGAGCGGGAGAAGGGCCGGCAGCCGAAACCAAGGAC
GAGGAGACTGGCTAATTTGCTGCTCTATGGAGACAGGGAGATGATCTCTG
CACGAAAGTGTCGGGCTGCGAGAACGTTCTGTCGGAAAAATGAGACAGGG
ATGAGGATTACTTTGATGATTCTGATTCTGAATTGAAACAAGGATGAGAC
TGGATAACTATCTGATCTTATGAGACAGGGAGATGGTCTCTGCACGAAAG
TGTCGGGCCGCAAGAACGTTCTGTCAGAAAAGTGAGACAGGGATGAGGAT
TTTAGTGTGATGATTCTGGCTTGATGTGCACCCGGAGGGTCTTTGGCCGA
GGCATGGTGTCCCACCAAGACGCACTGTGCCTTTCAAAGATCCGAACATC
GTGGTCTGCTGTTGTGGAGCGAGGAGTTGGGGTCTTGTACGTGCGCACTT
TTGTGAAGGACTAGGAGGTAAAGATATGCGTTTTTGATGAGTGGGGCCGG
ATTTCAGGAACCACACGTACAGACCCAGGAACCAACGCTAGAGTTGATCC
AAAAGCGTTGCCGTGACTCTGTTGGTTTGTTCGGTGACGGGGACGACTCA
ACGTCTGGTGTGTATTCAACGTGATGCTAAGTGAAGCGTGCTGCTGGAGA
TTAGGATTGATGAGGTTACCAACTTACACCTTCGTCGCACTGCTGTCAGT
GACGGGCGAGGATTATATCAAAGATCGATTGGTTGATGGGAATTCTGCCT
GCCTAGTGTCGAGGTGTTGTCACAAAGGGTCGCTCTTACAGTAGAGACGA
CTTTTTCGCCACGAGGGGCTTCTTCGTTTGCAGCTAAAAGTGGTCAGTTG
GCGATGTCTTTATTCAACCCGACCTTTCCATTGTTGTGTGTTGCTTGTGC
TGTTTTGTACGGAGTAGTGTCTTGGTGCTCTTTGATTCCTGGGGCCTAGA
ACTGCGTGTAAAATTTGACGAGAGGGTGATAAAATCAAACACCAGAGACG
CACCTTGACGAAAATGTGCAAAAATAGTCGAGTGGCCGACCGAAGACATC
CTCTACTTTGTCGGCAGTGTTGTGGTGTTGGTGCCGTTTCTGTGCGATGC
CAGCCTGTTTCTGTTGTCGGCGCTGGTTGTTTTTTAAACCCGCTCAGGGC
CTTCTTGGTGTGTTTTTCCCCTACCGTAAACTTTTATTTTGTTCATGTTC
GCGCAATTGACTGCGCGCTGTTTTTCCGACGGTTTGAAAGCTCGTCAGCG
AAATTTTTTGCTCTCTTTCCTTGGGAAGAAGATTATGCTGCCCCAGTTTC
GCGTTATTTCCACGGTTCGTATCAACAGCAGCATGGCCTTTCGCTCTTTT
GTGAGACTGCTTTCGCACTTTTAGTGAGCGAGCTGTTTGATGCGTTTCGC
GTTTTTCCTTTCAAAAGAGTAGCTATGTAGAGAAGCTATTTGCTCATCGC
GAGGTGTTGAATCCCGTACGGATCTCCACCCTGCCAGTTGGTGCTCGTTG
TCAGTGTGTTTACAGTAGTATCTCACGGGCCTACATATGACTTGTGTGCT
TGTTGTCCATGCGCGTCTCAGTGTAGTCAGTTGGCTGCCTAGTACTGGGC
ATCGTAGCTTGTGCTGGTGATTTTACCCCCCCTTTAATGATTTGTAGTAC
ATCACTGCTGTACATGTGAGTTGCCAAGTTTTTAATCCCCCAATTTTTTT
GCGGTTGGTACATGAAGAGTTGTCGGGTTTCGGCATTCAGTACCCCGAAT
GATATCTTGTGGCTATCGTGGGTGCTGCCCGTGCGTATGGGGTGTACGGG
TTTGCGTTATACACCTCACATTTTACGTACGTACAGTCGGGTATGGAAGC
CAACTCTCCTGCCGTAGCTGATTCGTTTGAGACCGGAACCTCGAAAAGTA
CCGGCGGGATGAATGCATTGGTACACTACTGCTGTGAAGCATGATCGGTG
TGCGGGTATGAGATCCCCTGATTTTATGCACCTTTGGCCCCAAGTGCACG
AGAGGGTTCCAAGCCTCCATCTCATCGGGTGTTTCCTTCGAAGTTCAAAT
TAGACAAATGCGCATTCGATCGCTCTCTCCTTGGAAAAACGGAGAATATT
TTTGCCATGTGATGGGGCTGTCTTGAATCTTGTTCCATGATGAAAAACCG
TTGTCC

Coding sequence (CDS) from alignment at P-littoralis_Contig116:81491..91996+

>mRNA_P-littoralis_Contig116.17.1 ID=mRNA_P-littoralis_Contig116.17.1|Name=mRNA_P-littoralis_Contig116.17.1|organism=Pylaiella littoralis U1_48|type=CDS|length=555bp|location=Sequence derived from alignment at P-littoralis_Contig116:81491..91996+ (Pylaiella littoralis U1_48)
ATGGGTAAGTTTTCTGAGTCGGTCTCGGGTTGGTTCCGCAAAGGAAGTCA
GCCCGTTGACGAGGACATCCTGAGCAAAGGGGTAGTCTGGAACGCCAGGG
GAGAGATGCAGAGCTGTCTATTCTGCGACTTCGCGCAGCATTCCAAGGAG
AAGGAGCTCCTGTTCGAAGACGATCTTGTGGCAGCCTTCGCGCCGAAGAA
ACCCGCAGCGAAGCAGCACATCCTGGTGATCCCGAAGAAGCACATTTCGA
CCGTTGGTGACTTGGTCGAGGCTGACACCGCGGTGCTGGATAGGATGAAG
TCGGTAGCAGACGGGCTCCTAAAGTGCGACGCCTCGGACATCCAGTACAG
CTTCCACATACCCCCCTGGAACAGCATCGACCATCTTCATCTCCACGCGT
TCGAGACGCCGTTTTTGTCGTGGTGGCAAGAGTTGAGGTTTTCACAAGGA
AAGCCTTGGTGCGCTTCCTTTGAGAGGGTCAGGATCTGGGCTTCGGGCGC
AGGAGGAGCGGGAGAAGGGCCGGCAGCCGAAACCAAGGACGAGGAGACTG
GCTAA