mRNA_P-littoralis_Contig1151.7.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1151.7.1 vs. uniprot
Match: D8LH66_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH66_ECTSI) HSP 1 Score: 122 bits (306), Expect = 5.420e-31 Identity = 76/113 (67.26%), Postives = 84/113 (74.34%), Query Frame = 2
Query: 77 LLRDLLRQGASVSVADSDGYTALHH-VYHENLAVSKELIEGGANLEARPGGFMVDGVYGTPDHVAATKGFYQGMVELIDAGAKVDSRLDDGATPLFFAAVNGW---VRVLIRA 403
++RDLLRQGASVSVADSDG TALHH VYH +LAVSK+LIE GA+LEAR GG TP HVAATKGF QGM L+D SRLDDGATPLF AA +G VRVL+RA
Sbjct: 44 VVRDLLRQGASVSVADSDGCTALHHSVYHNHLAVSKDLIEAGADLEARHGG------KDTPLHVAATKGFCQGMKLLMD------SRLDDGATPLFLAASDGRLEAVRVLLRA 144
BLAST of mRNA_P-littoralis_Contig1151.7.1 vs. uniprot
Match: A0A6H5K1W5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1W5_9PHAE) HSP 1 Score: 115 bits (289), Expect = 5.510e-26 Identity = 90/219 (41.10%), Postives = 103/219 (47.03%), Query Frame = 2
Query: 77 LLRDLLRQGASVSVADSDGYTALHH-VYHENLAVSKELIEGGANLEARPGGFMVDGVYGTPDHVAATKGFYQGMVELIDAGAKVDSRLDDGATPLFFAAVNGWVRV-----------LIRARTLIRFWFGTAYSR*ERRYTMNIWKWSVSLCVGTEPIAVQATATHWLTWRPLFAST*IVPFLCDAGVVDTEGVTL*AAVEGCSAAYVAFLLGRQGGNA 697
++RDLLRQGASVS+ADSDGY ALHH VYH++LAVSK+LIE GA+L+ARPGG +D TP HVAATKGF Q M L+ A + W + C ATA IV FLCDAGVVDTEGV L AA+EGCS A V LL RQG A
Sbjct: 434 VVRDLLRQGASVSLADSDGYPALHHAVYHKHLAVSKDLIEAGADLDARPGG--ID----TPLHVAATKGFCQEMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPLLSADXXXXXXXXXXXXXXXXXXELVYW-YGTDGCTSDGGALALATAASR-------NQVDIVTFLCDAGVVDTEGVALCAAIEGCSEACVYLLLRRQGRKA 638
BLAST of mRNA_P-littoralis_Contig1151.7.1 vs. uniprot
Match: A0A6H5JHQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHQ8_9PHAE) HSP 1 Score: 106 bits (265), Expect = 4.010e-23 Identity = 87/233 (37.34%), Postives = 103/233 (44.21%), Query Frame = 2
Query: 77 LLRDLLRQGASVSVADSDGYTALHH-VYHENLAVSKELIEGGANLEARPGGFMVDGVYGTPDHVAATKGFYQGMVELIDAG-------------------------AKVDSRLDD-GATPLFFAAVNGWVRVLIRARTLIRFWFGTAYSR*ERRYTMNIWKWSVSLCVGTEPIAVQATATHWLTWRPLFAST*IVPFLCDAGVVDTEGVTL*AAVEGCSAAYVAFLLGRQGGN 694
+++DLLRQGASVSVADSDGYTALHH VYH +LAVS LIE GA+LEARPG A + L G+ PL A NG ++V+ + W+GT + G +A A+ H IV FLCDAGVVDTEGV L AA+EGCS A V LL RQGGN
Sbjct: 44 VVKDLLRQGASVSVADSDGYTALHHSVYHRHLAVSISLIEAGADLEARPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRANANPLLSAYGSLPLGTAVYNGHLKVVSE----LVHWYGTDRCTNDG---------------GVLALATAASRKH----------VDIVTFLCDAGVVDTEGVALCAAIEGCSEACVYLLLRRQGGN 247
BLAST of mRNA_P-littoralis_Contig1151.7.1 vs. uniprot
Match: A0A6H5JL58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL58_9PHAE) HSP 1 Score: 84.3 bits (207), Expect = 4.300e-15 Identity = 81/234 (34.62%), Postives = 97/234 (41.45%), Query Frame = 2
Query: 77 LLRDLLRQGASVSVADSDGYTALHH-VYHENLAVSKELIEGGANLEARPGGFMVDGVYGTPDHVAATKGFYQGMVELIDAG-------------------------AKVDSRLDD-GATPLFFAAVNGWVRVLIRARTLIRFWFGTAYSR*ERRYTMNIWKWSVSLCVGTEPIAVQATATHWLTWRPLFAST*IVPFLCDAGVVDTEGVTL*AAVEGCSAAYVAFLLGRQGGNA 697
++RDLLRQGASVSVADSDGYTALHH VYH++LAVSK A + L G+ PL A +G + V+ R L+ W+GT R T + G +A A+ H IV FLC+AGVVDTEGV L AA+EGCS A V LL RQGGNA
Sbjct: 465 VVRDLLRQGASVSVADSDGYTALHHAVYHKHLAVSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANANPLLSAYGSLPLGMAVYHGHLEVV---RELVH-WYGTD------RCTSD---------GGALALATAASRKH----------VDIVAFLCNAGVVDTEGVALCAAIEGCSEACVYLLLRRQGGNA 669
BLAST of mRNA_P-littoralis_Contig1151.7.1 vs. uniprot
Match: A0A6H5L5L0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5L0_9PHAE) HSP 1 Score: 64.3 bits (155), Expect = 2.410e-8 Identity = 32/39 (82.05%), Postives = 36/39 (92.31%), Query Frame = 2
Query: 68 PRALLRDLLRQGASVSVADSDGYTALHH-VYHENLAVSK 181
P ++RDLLRQGASVSVADSDGYTALHH VYH++LAVSK
Sbjct: 47 PSRVVRDLLRQGASVSVADSDGYTALHHAVYHKHLAVSK 85
BLAST of mRNA_P-littoralis_Contig1151.7.1 vs. uniprot
Match: A0A6H5K5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE) HSP 1 Score: 58.5 bits (140), Expect = 2.800e-6 Identity = 39/88 (44.32%), Postives = 55/88 (62.50%), Query Frame = 2
Query: 161 ENLAVSKELIEGGANLEARPGGFMV--DGVYG-TPDHVAATKGFYQGMVELIDAGAKVDSRLDDGATPLFFAAVNGW---VRVLIRAR 406
+NLAV+K L++ GA+LEA+ F + D G TP H+AA F + L+ AGA V+ RL +GATPL+ +A G VR+LIR +
Sbjct: 14 DNLAVTKALVKAGADLEAKAACFTLGPDLTEGNTPLHLAAGGAFGEITTALVGAGANVNCRLKNGATPLYLSACCGRLGAVRILIRGK 101
BLAST of mRNA_P-littoralis_Contig1151.7.1 vs. uniprot
Match: A0A7X3XUE7_9BACT (Uncharacterized protein n=3 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7X3XUE7_9BACT) HSP 1 Score: 55.5 bits (132), Expect = 2.550e-5 Identity = 39/100 (39.00%), Postives = 53/100 (53.00%), Query Frame = 2
Query: 80 LRDLLRQGASVSVADSDGYTALHHVYHEN-LAVSKELIEGGANLEA--RPGGFMVDGVYGTPDHVAATKGFYQGMVELIDAGAKVDSRLDDGATPLFFAA 370
+R LLRQGA V+ A SDG TALH N +A++K L+ GA A R GG+ TP H+A+ G + +++ GA D G T + FAA
Sbjct: 60 VRALLRQGADVNTAQSDGMTALHWAASNNDIAIAKALLYAGATYRATTRIGGY-------TPLHLASRGGHAEVARLILEDGADPDILTSTGVTAMHFAA 152
BLAST of mRNA_P-littoralis_Contig1151.7.1 vs. uniprot
Match: A0A135THY4_9PEZI (Pfs domain-containing protein n=1 Tax=Colletotrichum simmondsii TaxID=703756 RepID=A0A135THY4_9PEZI) HSP 1 Score: 54.3 bits (129), Expect = 6.310e-5 Identity = 42/121 (34.71%), Postives = 63/121 (52.07%), Query Frame = 2
Query: 74 ALLRDLLRQGASVSVADSDGYTALHHV---YHENLAVSKEL---IEGGANLEAR--PGGFMVDGVYGTPDHVAATKGFYQGMVELIDAGAKVDSRLDDGATPLFFAAVNGWVRVLIRARTL 412
A++R L+R GASV++ D G+ A+HH+ Y++ + + L +E GA++E+R PG TP V+ G +G LI+AGAK DG L AA+ G + L TL
Sbjct: 404 AIIRSLIRAGASVNITDQQGFYAIHHLTSSYNKGRVIRESLRVLLEAGADIESRNRPGR--------TPLLVSIQSGDCRGTQCLIEAGAKTTYVTRDGWGLLHEAALYGTTKTLRYLSTL 516 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1151.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1151.7.1 >prot_P-littoralis_Contig1151.7.1 ID=prot_P-littoralis_Contig1151.7.1|Name=mRNA_P-littoralis_Contig1151.7.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=73bp MVDGVYGTPDHVAATKGFYQGMVELIDAGAKVDSRLDDGATPLFFAAVNGback to top mRNA from alignment at P-littoralis_Contig1151:34510..35206+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1151.7.1 ID=mRNA_P-littoralis_Contig1151.7.1|Name=mRNA_P-littoralis_Contig1151.7.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=697bp|location=Sequence derived from alignment at P-littoralis_Contig1151:34510..35206+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1151:34510..35206+ >mRNA_P-littoralis_Contig1151.7.1 ID=mRNA_P-littoralis_Contig1151.7.1|Name=mRNA_P-littoralis_Contig1151.7.1|organism=Pylaiella littoralis U1_48|type=CDS|length=219bp|location=Sequence derived from alignment at P-littoralis_Contig1151:34510..35206+ (Pylaiella littoralis U1_48)back to top |