mRNA_P-littoralis_Contig1120.7.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1120.7.1 vs. uniprot
Match: A0A6H5JAK2_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAK2_9PHAE) HSP 1 Score: 473 bits (1217), Expect = 7.780e-144 Identity = 267/577 (46.27%), Postives = 340/577 (58.93%), Query Frame = 2
Query: 3710 VSASPSSSEGMRLLRSD*MRGRRWRTAPSRI*RRRSSRALAKIAPRAQLREVALLQFEREFMEQPATERDRCRELVVVRGPAVEMAIKCLRDSPAFKGDEGGGNGMALDGRVYAPARWEEILNGPEQALEKMQDVTAFVVLGDKTK-----KGATKIRLFTIPSANPTTKATNREGRSSAAKDSTANAYAGGREWKAVVLNVFDFVGMSG------KLDEREVDVRAAA*HVGGDRSNHALLHGKCCWS*GAKHANKAKGPMKWLEEEIPDGFTYEPFYEADAHAIDLPESIHQGVRPPDLERGSVGVIEYFERELKTKWLKEPELLLVSYDRAALVPVIKGHEQQGRTDKIGGSDRTFGSSSEDPISPSQFQARLRADGKKARDGVATHLAMKVLADPIWSGDDAPTKAVEFYGVGDEPGMGWEEEVGIAAGGVSIVMVGRDSGVSSAGAAAYADGEMRESSAPMPGAGSGSAGTKDDTSGESGLGPRVIKEPLLHFRNGTAGDMGIHRHREPDIGEAELSIVHFIVWDKKYWGNKFRRWLVTSVDTDEWMIIQLAMSTGKIAARGPEAVQVTCRE 5407
VS P + + L + R ++T RI S + +AP AQLREVA+ FE F+E+ TERDRCREL V R PAV A+ CLR S AFKGD+G + LDGRV+ P +W+EIL+ P +AL KM++ + V K KGA K ++F+IP+ N KAT +GRSSA KDS NA+AGG+EWKA+ LN+FD G K+ E + AA + + + GAKHANKA GP KW+ E DGF +PFY+ADAH +DLP SIHQGV P LE+G+ G+I+YF+R+L + WL+ ELLLV YDR LVPVIKG EQ GRT+K+G RTF S DP+ Q+ LRADGK ARDG+A +LAM+VLAD +W+GD P V FYGVG EPG+ + G+ A GV + M G G + SG EPLLHFRNG +G+ R R PDIGEAELS++HFIVW K+YWG F +W+V+SVDTD WMII LAM+TG + RG AV VT ++
Sbjct: 10 VSLGPDTFARIGLDERQEVSNRLYKTLTKRI----LSSTIETLAPIAQLREVAIFDFESHFIEKQRTERDRCRELAVKRAPAVRAAVDCLRQSTAFKGDDGKDKVVGLDGRVFPPVKWQEILDSPAKALAKMRECVLYYVFKKKKLNGAKLKGAIKKKVFSIPARNSINKATKSQGRSSALKDSVGNAFAGGQEWKALTLNMFDAAREGGGVVTQAKMLEMVASIGAATPYSMANATG------------GAKHANKAAGPGKWVREHCADGFADDPFYDADAHGVDLPVSIHQGVHPEYLEKGTAGIIDYFKRQLLSTWLQSTELLLVCYDRQELVPVIKGQEQLGRTEKLGECSRTFDPKSTDPVPSLQYGPWLRADGKAARDGIAANLAMRVLADEVWTGDTKPNGIVAFYGVGGEPGLRADHPAGVDAEGVGLEM--------------------------------GGVGATEALSGT---------EPLLHFRNGNDPILGVERQRGPDIGEAELSVIHFIVWAKRYWGKNFHKWIVSSVDTDLWMIILLAMTTGWLRPRGEGAVDVTVQK 529
BLAST of mRNA_P-littoralis_Contig1120.7.1 vs. uniprot
Match: A0A6H5JYE1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYE1_9PHAE) HSP 1 Score: 473 bits (1217), Expect = 6.530e-142 Identity = 292/684 (42.69%), Postives = 375/684 (54.82%), Query Frame = 2
Query: 3446 DSVVEWINERAKVDKIFALWAHFLLHDYPAYI----------WRSKLPCARGIS-CYGVTP-------CAVSVRPFSPPARTGIRTSS*TTSRKWRGGHRRI*RSCVSASPSSSEGMRLLRSD*MRGRRWRTAPSRI*RRRSSRALAKIAPRAQLREVALLQFEREFMEQPATERDRCRELVVVRGPAVEMAIKCLRDSPAFKGDEGGGNGMALDGRVYAPARWEEILNGPEQALEKMQDVTAFVVLGDKTKKGA-----TKIRLFTIPSANPTTKATNREGRSSAAKDSTANAYAGGREWKAVVLNVFDFVGMSG------KLDEREVDVRAAA*HVGGDRSNHALLHGKCCWS*GAKHANKAKGPMKWLEEEIPDGFTYEPFYEADAHAIDLPESIHQGVRPPDLERGSVGVIEYFERELKTKWLKEPELLLVSYDRAALVPVIKGHEQQGRTDKIGGSDRTFGSSSEDPISPSQFQARLRADGKKARDGVATHLAMKVLADPIWSGDDAPTKAVEFYGVGDEPGMGWEEEVGI-AAGGVSIVMVGRDSGVSSAGAAAYADGEMRESSAPMPGAGSGSAGTKDDTSGESGLGPRVIKEPLLHFRNGTAGDMGIHRHREPDIGEAELSIVHFIVWDKKYWGNKFRRWLVTSVDTDEWMIIQLAMSTGKIAARGPEAVQVTCRE 5407
D VV WI RA+ K FA+W FLLHDY YI +R +L R I+ VT A + S +R +R S S VS P + + L + R ++T RI S + K+ P AQLREVA+ FE F+E+ TERDRCRE VV R PAV A+ CLR+SPA +GD+G ALDGRV+ P +W+E L+ P +A KM++ + V K GA TK ++F+IP+ N KAT R+GRSSA KDS NAYAGG+EWKA+ LN+FD G ++ E +RAA + + + GAKH NKA GP KW+ + DGF +PFY+ADAH +DLP S HQGV P LE+G+ G+I+Y R+L +KWL+ ELLLV YDR LVPVIKG EQ GRT+K+G RTF S DP++ Q+ LRAD K AR+G+A +LAM+VLAD +W+GD P V FYGVG EPG+ + G+ A GG+ + G G + SG EPLLHFRNG G+ R PDIGEAELS++HFIVW KKYWG F +W+V+SVDTD WMII LAM+TG + RG AV VT ++
Sbjct: 137 DGVVRWIVARAESHKTFAVWKQFLLHDYHEYIAFRTALRTGNFRLRLEGLRRIAPILFVTGKDKYQFLVADHLTEVSGYSRNDMRVVSELFS--------------VSHGPDTFARIGLDERKEVSNRLYKTLAKRI----LSSTIEKLTPIAQLREVAIFDFESHFIEKTRTERDRCREFVVKRAPAVMAAMDCLRESPALEGDDGKDKVAALDGRVFPPVKWQEFLDSPAKARAKMRECVLYYVFKKKKLNGAKLNGATKKKIFSIPARNSINKATKRQGRSSALKDSVRNAYAGGQEWKALTLNMFDAAREGGGVVTQDQMLEMVASIRAATPYSMANATG------------GAKHTNKAAGPGKWVRDHGDDGFADDPFYDADAHGVDLPVSTHQGVHPEYLEKGTAGIIDYRMRQLLSKWLQSTELLLVCYDRQELVPVIKGQEQLGRTEKLGECSRTFDPKSTDPVTALQYGPWLRADRKAARNGIAAYLAMRVLADEVWTGDTKPNGIVAFYGVGGEPGLSADHPAGVDAEGGLEM----------------------------------GGVGATEALSGT---------EPLLHFRNGNDPTPGVERQLGPDIGEAELSVIHFIVWAKKYWGKNFDKWIVSSVDTDLWMIILLAMTTGWLRPRGEGAVDVTVQK 747
BLAST of mRNA_P-littoralis_Contig1120.7.1 vs. uniprot
Match: A0A6H5L6D9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6D9_9PHAE) HSP 1 Score: 494 bits (1273), Expect = 8.010e-139 Identity = 293/663 (44.19%), Postives = 381/663 (57.47%), Query Frame = 2
Query: 3446 DSVVEWINERAKVDKIFALWAHFLLHDYPAYI-WRSKLPCAR-GISCYGVTPCAVSVRPFSPPARTGIRTSS*TTSRKWRGGHRRI*RSCVSAS--PSSSEGMRLLRSD*MRGRRWRTAPSRI*RRRSSRALAKIAPRAQLREVALLQFEREFMEQPATERDRCRELVVVRGPAVEMAIKCLRDSPAFKGDEGGGNGMALDGRVYAPARWEEILNGPEQALEKMQDVTAFVVLGDK----TK-KGATKIRLFTIPSANPTTKATNREGRSSAAKDSTANAYAGGREWKAVVLNVFDFVGMSGKLDEREVDVRAAA*HVGGDRSNHALLHGKCCWS*GAKHANKAKGPMKWLEEEIPDGFTYEPFYEADAHAIDLPESIHQGVRPPDLERGSVGVIEYFERELKTKWLKEPELLLVSYDRAALVPVIKGHEQQGRTDKIGGSDRTFGSSSEDPISPSQFQARLRADGKKARDGVATHLAMKVLADPIWSGDDAPTKAVEFYGVGDEPGMGWEEEVGIAAGGVSIVMVGRDSGVSSAGAAAYADGEMRESSAPMPGAGSGSAGTKDDTSGESGLGPRVIKEPLLHFRNGTAGDMGIHRHREPDIGEAELSIVHFIVWDKKYWGNKFRRWLVTSVDTDEWMIIQLAMSTGKIAARGPEAVQVTCRE 5407
D VV WI R + K FA+W FLLHDYPAYI +R+ L + G+ A + T ++ R+ S S P + + L + R ++T RI S + K+AP AQLREVA+ FE F+E+P TERDRCREL V R PAV A+ CLR+SP F+G++G +ALDGRV+ P + +EI++ P A K+++ + V K TK KGATK ++F+IP+ N KAT +GRSSA KDS NAYAGG+EWKA+ LN+ D G + ++ + A VG A + + GAKHANKA GP KW+ E DGF +PFY+ADAH +DLP SIHQGV P LE+G+ G+I+YF+R+L +KWL+ ELL+V YDR LVPVIKG EQ GRT+K+G RTF S DP+ Q+ LRADGK ARDG+A +LAM+VLAD +W+GD P V FYGVG EPG+ + G+ A GV + M G G + SG EPLLHFRNG +G+ R R PDIGEAELS++HFIVW K+YWG F +W+V+SVDTD WMII LAM+TG + RG AV VT ++
Sbjct: 1026 DGVVRWIVARTESHKTFAVWKQFLLHDYPAYIAFRTALRTGNFRLRLEGLRRIAPIFFITGKDKYQFLVVDHLTEVSRYSRNDMRVVSELFSVSLGPDTFARIGLDERQEVSNRLYKTLTKRI----LSSTIEKLAPIAQLREVAIFDFESHFIEKPRTERDRCRELAVKRAPAVRAAMDCLRESPVFEGNDGKDKVVALDGRVFPPVKSQEIIDSPANARAKLRECVLYYVFKKKKLNGTKLKGATKKKVFSIPARNSINKATKSQGRSSALKDSVGNAYAGGQEWKALTLNMIDAAREGGGVVTQDQMLEMVA-SVGA-----ATPYSMANATGGAKHANKAAGPGKWVREHCADGFADDPFYDADAHGVDLPVSIHQGVHPEYLEKGTAGIIDYFKRQLLSKWLQSTELLMVCYDRQELVPVIKGQEQLGRTEKLGECSRTFDPKSTDPVPSLQYGPWLRADGKAARDGIAANLAMRVLADEVWTGDTKPNGIVAFYGVGGEPGLRADHPAGVDAEGVGLEM--------------------------------GGVGATEALSGT---------EPLLHFRNGNDPILGVERQRGPDIGEAELSVIHFIVWAKRYWGKNFHKWIVSSVDTDLWMIILLAMTTGWLRPRGEGAVDVTVQK 1637
BLAST of mRNA_P-littoralis_Contig1120.7.1 vs. uniprot
Match: A0A6H5K5E1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5E1_9PHAE) HSP 1 Score: 432 bits (1111), Expect = 2.100e-122 Identity = 281/680 (41.32%), Postives = 364/680 (53.53%), Query Frame = 2
Query: 3452 VVEWINERAKVDKIFALWAHFLLHDYPAYI----------WRSKLPCARGIS-CYGVTP-------CAVSVRPFSPPARTGIRTSS*TTSRKWRGGHRRI*RSCVSASPSSSEGMRLLRSD*MRGRRWRTAPSRI*RRRSSRALAKIAPRAQLREVALLQFEREFMEQPATERDRCRELVVVRGPAVEMAIKCLRDSPAFKGDEGGGNGMALDGRVYAPARWEEILNGPEQALEKMQDVTAFVVLGDKTKKGATKIRLFTIPSANPTTKATNREGRSSAAKDSTANAYAGGREWKAVVLNVFDFVGMSGKLDEREVDVRAAA*HVGGDRSNHALLHGKCCWS*GAKHANKAKGPMKWLEEEIPDGFTYEPFYEADAHAIDLPESIHQGVRPPDLERGSVGVIEYFERELKTKWLKEPELLLVSYDRAALVPVIKGHEQQGRTDKIGGSDRTFGSSSEDPISPSQFQARLRADGKKARDGVATHLAMKVLADPIWSGDDAPTKAVEFYGVGDEPGMGWEEEVGIAAGGVSIVMVGRDSGVSSAGAAAYADGEMRESSAPMPGAGSGSAGTKDDTSGESGLGPRVIKEPLLHFRNGTAGDMGIHRHREPDIGEAELSIVHFIVWDKKYWGNKFRRWLVTSVDTDEWMIIQLAMSTGKIAARGPEAVQVTCREPWAMFPGSCW 5437
VV WI +RA K FALW HFLLH +PAY+ + +L R I+ + ++ + S + + ++ S S VS S + + L + R + T +RI + K+AP AQLRE+ +F REF+E P TERD CREL ++R PAV A +CLRDSP F+G+ G G +ALD RV+ A+W+EIL AL KMQD + V DKTK GATK ++F+IP+ N ++T GRSS +D+ NAYAG +E KAVVLN++D + G L E +V A R + + GAKHANK++GP KWL++ D EPFY A+ +DLP SIHQGVR DLE G+ GVI YF EL ++W +LLLV DRA+LVP IKG EQ GR DKIGG + +S D I PSQ+Q+ LR + K AR G+A HLAM +L D W+G V FYGVG E + + A RD G G A + S SG GT+ E G+ + PLLH+R G + R R P+IGEAELS+VHFIVW KKYWG WLVTSVDTD+ MII LAMSTG + A G AV+VT ++ P W
Sbjct: 269 VVAWIKKRAAEHKTFALWEHFLLHVFPAYMTFRTAMRTGDFMLRLDALRRIAPIFYISGKDRYQFLVVDHLAEMSRMSESDLKVMSDFFS--------------VSLSKDACARLGLDERQEVANRLYTTLTNRI----FPSFIHKLAPTAQLREIDEFEFGREFLEGPRTERDSCRELALLRAPAVMKATQCLRDSPLFEGNLGKGKVVALDERVFPEAKWQEILGASATALAKMQDFVLYFVKKDKTKNGATKKKIFSIPALNTENESTRSNGRSSKLRDTVGNAYAGCQEMKAVVLNIWDMIEGGGSLSEEQVVDMAT-------RIGASTPFSMANATGGAKHANKSEGPTKWLQDHSSDAVADEPFYTVHAYGVDLPVSIHQGVRQRDLEGGAQGVINYFVSELDSRWRMGADLLLVCNDRASLVPAIKGREQLGRADKIGGCALSLDPTSTDAIPPSQYQSWLRDNQKAARGGIAAHLAMGILDDKRWTGGCTLNGIVAFYGVGGEASLRTSDAADPAV---------RDGGGLPGGPATSPEIPAPVGSVENSTVRSGGGGTE-----EGGVPTLAEEYPLLHYRRGAG--RSVQRERGPNIGEAELSLVHFIVWAKKYWGRNIENWLVTSVDTDQRMIILLAMSTGFLKASGEGAVEVTVQKVVGGAPKYLW 907
BLAST of mRNA_P-littoralis_Contig1120.7.1 vs. uniprot
Match: A0A6H5JK56_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK56_9PHAE) HSP 1 Score: 404 bits (1038), Expect = 4.330e-115 Identity = 269/716 (37.57%), Postives = 357/716 (49.86%), Query Frame = 2
Query: 3446 DSVVEWINERAKVDKIFALWAHFLLHDYPAYI----------WRSKLPCARGIS---C--------YGVTPCAVSVRPFSPPARTGIRTSS*TTSRKWRGGHRRI*RSCVSASPSSSEGMRLLRSD*MRGRRWRTAPSRI*RRRSSRALAKIAPRAQLREVALLQFEREFMEQPATERDRCRELVVVRGPAVEMAIKCLRDSPAFKGDEGGGNGMALDGRVYAPARWEEILNGPEQALEKMQDVTAFVVLGDKTKKGATKIRLFTIPSANPTTKATNREGRSSAAKDSTANAYAGGREWKAVVLNVFDFVGMSGKLDEREVDVRAAA*HVGGD---------------------RSNHAL-LHGKCCWS*--------------------GAKHANKAKGPMKWLEEEIPDGFTYEPFYEADAHAIDLPESIHQGVRPPDLERGSVGVIEYFERELKTKWLKEPELLLVSYDRAALVPVIKGHEQQGRTDKIGGSDRTFGSSSEDPISPSQFQARLRADGKKARDGVATHLAMKVLADPIWSGDDAPTKAVEFYGVGDEPGMGWEEEVGIAAGGVSIVMVGRDSGVSSAGAAAYADGEMRESSAPMPGAGSGSAGTKDDTSGESGLGPRVIKEPLLHFRNGTAGDMGIHRHREPDIGEAELSIVHFIVWDKKYWGNKFRRWLVTSVDTDEWMIIQLAMSTGKIAARGPEAVQVTCR 5404
D V+ WI R + K FA+W FLLHDYPAYI +R +L R I+ C + V V +S R +R S +S VS P + + + R ++T R+ S + K+AP AQLR+VA+L FE F+E+P TERDRCREL V R PAV AI C R+S AFKGD+G +ALDGRV+ P +W+EILN ++A ++++ + V K KGATK ++F+IP+ N T KAT GRSSA KD+ NA+AG V+ ++ + M + + A A GG+ RS+H L C S GAKHA KA GP+ W+ E DGF +PFY+ADAH +DLP SIHQGV P LE+G+ +I+YF+++L +KWLK EL + YDR LVP IKGHEQ+GRT+K+GG RTF S DP+ Q + LRADGK ARDG+A +LAM+VLAD +W+ D P V +A+ + V PLLHF +GT + RHR PDIGEAEL ++HFI KKYWG +F +W+V+SVDTD WMII LAM+T + RG AV +T +
Sbjct: 89 DGVIWWIAARVEAHKTFAVWKQFLLHDYPAYIASRTALRTGNFRLRLDALRRIAPNFCITGKDKYQFLVIDHLTEVSRYS---RNDMRVVSELSS--------------VSLGPDTIARIGSDERQEVANRLYKTLTKRV----LSSTIEKLAPIAQLRQVAMLDFESHFVEKPRTERDRCRELSVKRAPAVRAAIDCSRESSAFKGDDGIIKVVALDGRVFPPVKWQEILNSGDKAAAQLRECVLYYVFKKKDLKGATKKKIFSIPARNSTNKATKNHGRSSARKDTVGNAHAG----SGGVVTQYEMLEMVRSIGAATPNSMANA--TGGEGESVRILNEGKALSSRDFAPSRSSHTLNTRASECLSTCSVPPPHPHTPVEISHFNATGAKHAKKAAGPLIWVREHCADGFAVDPFYDADAHGVDLPVSIHQGVHPEYLEKGTAVIIDYFKKQLLSKWLKSTELPVARYDRQELVPAIKGHEQRGRTEKLGGCSRTFDLKSTDPVPSLQNGSWLRADGKAARDGIAANLAMRVLADDVWTADTKPNGIV----------------ASLASEALEAV-------------------------------------------------------PLLHFGDGTDLIPDVERHRGPDIGEAELPVIHFIDRAKKYWGKRFDKWVVSSVDTDLWMIILLAMTTNWLPPRGEGAVDLTAQ 706
BLAST of mRNA_P-littoralis_Contig1120.7.1 vs. uniprot
Match: A0A6H5KTG2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTG2_9PHAE) HSP 1 Score: 399 bits (1026), Expect = 1.750e-113 Identity = 260/668 (38.92%), Postives = 332/668 (49.70%), Query Frame = 2
Query: 3446 DSVVEWINERAKVDKIFALWAHFLLHDYPAYI----------WRSKLPCARGIS-CYGVT-PCAVSVRPFSPPARTGIRTSS*TTSRKWRGGHRRI*RSCVSASPSSSEGMRLLRSD*MRGRRWRTAPSRI*RRRSSRALAKIAPRAQLREVALLQFEREFMEQPATERDRCRELVVVRGPAVEMAIKCLRDSPAFKGDEGGGNGMALDGRVYAPARWEEILNGPEQALEKMQDVTAFVVLGDKTKKGATKIRLFTIPSANPTTKATNREGRSSAAKDSTANAYAGGREWKAVVLN--VFDFVGMSGKLDEREVDVRAAA*HVGGDRSNHALLHGKCCWS*GAKHANKAKGPMKWLEEEIPDGFTYEPFYEADAHAIDLPESIHQGVRPPDLERGSVGVIEYFERELKTKWLKEPELLLVSYDRAALVPVIKGHEQQGRTDKIGGSDRTFGSSSEDPISPSQFQARLRADGKKARDGVATHLAMKVLADPIWSGDDAPTKAVEFYGVGDEPGMGWEEEVGIAAGGVSIVMVGRDSGVSSAGAAAYADGEMRESSAPMPGAGSGSAGTKDDTSGESGLGPRVIKEPLLHFRNGTAGDMGIHRHREPDIGEAELSIVHFIVWDKKYWGNKFRRWLVTSVDTDEWMIIQLAMSTGKIAARGPEAVQVTCRE 5407
D VV WI R + K FA+W FLLHDYPAYI +R +L R I+ + +T S +R +R S S VS P + + L + R ++T RI S + K+AP AQLREVA+ FE F+E+P TERDRCREL V R PAV A+ CLR+SP F+G++G +ALDGRV+ P + N + RE VV + + V G + A GG+ + GAKHANKA GP KW+ E DGF +PFY+ADAH +DLP SIHQGV P LE+G+ G+I+YF+R+L +KWL+ ELL+V YDR LVPVIKG EQ GRT+K+G RTF S DP+ Q+ LRADGK ARDG+A +LAM+VLAD +W+GD P V FYGVG EPG+ + G+ A GV + M G G + SG EPLLHFRNG +G+ R R PDIGEAELS++HFIVW K+YWG F +W+V+SVDTD WMII LAM+TG + RG AV VT ++
Sbjct: 27 DGVVRWIVARTESHKTFAVWKQFLLHDYPAYIAFRTALRTGNFRLRLEGLRRIAPIFFITGKDKYQFLVVSRYSRNDMRVVSELFS--------------VSLGPDTFARIGLDERQEVSNRLYKTLTKRI----LSSTIEKLAPIAQLREVAIFDFESHFIEKPRTERDRCRELAVKRAPAVRAAMDCLRESPVFEGNDGKDKVVALDGRVFPPVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----XXXXXNMFDAAREGGGVVTQDQMLEMVASIGAATPYSI-----ANATGGEEESVRNT--------GAKHANKAAGPGKWVREHCADGFADDPFYDADAHGVDLPVSIHQGVHPEYLEKGTAGIIDYFKRQLLSKWLQSTELLMVCYDRQELVPVIKGQEQLGRTEKLGECSRTFDPKSTDPVPSLQYGPWLRADGKAARDGIAANLAMRVLADEVWTGDTKPNGIVAFYGVGGEPGLRADHPAGVDAEGVGLEM--------------------------------GGVGATEALSGT---------EPLLHFRNGNDPILGVERQRGPDIGEAELSVIHFIVWAKRYWGKNFHKWIVSSVDTDLWMIILLAMTTGWLRPRGEGAVDVTVQK 618
BLAST of mRNA_P-littoralis_Contig1120.7.1 vs. uniprot
Match: A0A6H5JND3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JND3_9PHAE) HSP 1 Score: 402 bits (1034), Expect = 2.400e-113 Identity = 290/800 (36.25%), Postives = 381/800 (47.62%), Query Frame = 2
Query: 3446 DSVVEWINERAKVDKIFALWAHFLLHDYPAYI-WRSKLPCAR-GISCYGVTPCAVSVRPFSPPARTGIRTSS*TTSRKWRGGHRRI*RSCVSASPSSSEGMRLLRSD*MRGRRWRTAPSRI*RRRSSRALAKIAPRAQLREVALLQFEREFMEQPATERDRCRELVV--------------------------------------VRGPAVEMAIKCLRDSPAFKGDEGGGNGMALDGRVYAPARWEEILNGPEQALEKMQDVTAFVVLGDKTKKGATKIRLFTIPSANPTTKATNREGRSSAAKDSTANAYAGGREWKAVVLNVFDF------VGMSGKLDEREVDVRAAA*H-----VGGDRSN----------------------------------------HALLHGKCCWS*GAKH----------ANKAKGPMKWLEEEIPDGFTYEPFYEADAHAIDLPESIHQGVRPPDLERGSVGVIEYFERELKTKWLKEPELLLVSYDRAALVPVIKGHEQQGRTDKIGGS----DRTFGSSSEDPISPSQFQARLRADGKKARDGVATHLAMKVLADPIWSGDDAPTKAVEFYGVGDEPGMGWEEEVGIAAGGVSIVM---------------------------VGRDSG-------------VSSAGAAAYADGEMRESSAPMPGAGSGSAGTKDDTSGESGLGPRVI-KEPLLHFRNGTAGDMGIHRHREPDIGEAELSIVHFIVWDKKYWGNKFRRWLVTSVDTDEWMIIQLAMSTGKIAARGPEAVQVTCRE 5407
D VV WI RA+ K F++W FLL DYPAYI +R+ L + G+ V +S R +R S S VS P + + L + R ++T R+ S + K+AP QLREV + FE +E+P ERDRCREL V R PAV AI CLR+SPAF+GD+G +ALDGRV+ P +W++IL+ +A KM++ GATK ++ +IP+ N KAT +GRSSA KDS N YA ++WKA+ LN+FD V ++ E + AA + GG+ + H + CW K AN GP KW+ E DGF +PFY+ADAH +DLP SIHQGV P LE+G+ G+I+YF R+L +KWL+ ELLLV YDR LVPVIKG Q G T+K+G RTF S DP+ Q++ LRADGK RDG+A +LAM++LAD +W+GD P V YGVGDEPG+ + G+ A GV + M V R G + + A Y G+ SA P AG + G + GE G + EPLLHFRNG G+ R R PDIGEAELS++HFIVW KK WG F + +V+SVDTD WMII LAM+TG + RG AV +T ++
Sbjct: 185 DGVVRWIVARAESYKTFSVWKQFLLLDYPAYIAFRTTLRTGNLRLRLEGLRHHLTEVSRYS---RNDMRVISELFS--------------VSLGPDTFARIGLDERQEVSNRLYKTLTKRV----LSSTIEKLAPITQLREVVIFDFESHLIEKPRMERDRCRELAVKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAPAVRAAIDCLRESPAFEGDDGKDKVVALDGRVFPPVKWQDILDSSAKARAKMREC------------GATKEKILSIPARNSINKATKSQGRSSALKDSVGNPYAAEQQWKALTLNMFDAAREGRGVVAQDQMLEMVASIGAATPYSMANATGGEEESVRNTGCHLVLSLPAEAHPLSIPVFLSVIIIVHTTSHCVHPHPPIPKHPCWKSRPKRIRSQXTPYSMANATGGPGKWVREHCADGFADDPFYDADAHGVDLPVSIHQGVHPVYLEKGTAGIIDYFNRQLLSKWLQSTELLLVCYDRQELVPVIKGQGQLGSTEKLGEKLGECSRTFDPKSTDPVPSLQYEPWLRADGKAGRDGIAAYLAMRLLADEVWTGDTKPNGIVALYGVGDEPGLSADHPAGVDAEGVGLEMGEIGATEALSGTEPLLHFRNGNDPSPGVKRQRGPDIGEAELSVIHFIPNGIVALYGVGDEPGLSADHP-AGVDAEGVGLEM-GEIGATEALSGTEPLLHFRNGNDPSPGVKRQRGPDIGEAELSVIHFIVWAKKKWGKCFDKSIVSSVDTDLWMIILLAMTTGWLRPRGEGAVDMTVQK 949
BLAST of mRNA_P-littoralis_Contig1120.7.1 vs. uniprot
Match: A0A6H5JT11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT11_9PHAE) HSP 1 Score: 391 bits (1004), Expect = 1.240e-110 Identity = 229/527 (43.45%), Postives = 285/527 (54.08%), Query Frame = 2
Query: 3818 SRALAKIAPRAQLREVALLQFEREFMEQPATERDRCRELVVVRGPAVEMAIKCLRDSPAFKGDEGGGNGMALDGRVYAPARWEEILNGPEQALEKMQDVTAFVVLGDKTKKGATKIRLFTIPSANPTTKATNREGRSSAAKDSTANAYAGGREWKAVVLNVFDFVGMSGKLDEREVDVRAAA*HVGGDRSNHALLHGKCCWS*GAKHANKAKGPMKWLEEEIPDGFTYEPFYEADAHAIDLPESIHQGVRPPDLERGSVGVIEYFERELKTKWLKEPELLLVSYDRAALVPVIKGHEQQGRTDKIGGSDRTFGSSSEDPISPSQFQARLRADGKKARDGVATHLAMKVLADPIWSGDDAPTKAVEFYGVGDEPGMGWEEEVGIAAGGVSIVMVGRDSGVSSAGAAAYADGEMRESSAPMPGAGSGSAGTKDDTSGESGLGPRVIKEPLLHFRNGTAGDMGIHRHREPDIGEAELSIVHFIVWDKKYWGNKFRRWLVTSVDTDEWMIIQLAMSTGKIAARGPEAVQVT 5398
S + K+AP AQLREVA+ FE +E+P TERDRCREL V R PAV A+ CLR+SPAFKGD+G +ALDGRV+ P +W+EIL+ +A KM++ T KAT +GRSSA KDS NAYAG +EWKA+ LN+ D W GAKHANKA GP KW+ E DGF +PFYEADAH +DLP SIHQGV P L++G+ G+I+YF+++L +KWL+ ELL+V YDR LVPVIK G + + LRADGK ARD +A HLA +VLAD +W+GD P V FYGVG EP + + G+ A G+ + VGR+ GAG + T EPLLHFR+GT G+ R R PDIGEA+LS++HFIVW KKYWG F W+V+S DTD WMII LAM+TG + RG AV VT
Sbjct: 319 SSMIEKLAPIAQLREVAVFDFESHLIEKPRTERDRCRELAVKRAPAVRAAMDCLRESPAFKGDDGKDKVVALDGRVFPPVKWQEILDAAAKARAKMRECVL-------------------------TNKATKSQGRSSAMKDSVGNAYAGSQEWKALTLNMTDAARR---------------------------------WGCGAKHANKASGPGKWVREHCADGFADDPFYEADAHGVDLPVSIHQGVHPEYLKKGTAGIIDYFKKQLLSKWLQSTELLVVCYDRQDLVPVIKDTSSSGEPRNL-------------------YGPWLRADGKAARDEIAAHLATRVLADDVWTGDTKPNGIVAFYGVGGEPNLSVDHPPGVDAEGIGLE-VGRE------------------------GAGQALSET----------------EPLLHFRDGTDTIEGVERQRGPDIGEAKLSVIHFIVWAKKYWGEIFDEWVVSSEDTDLWMIILLAMTTGWLTPRGERAVDVT 727
BLAST of mRNA_P-littoralis_Contig1120.7.1 vs. uniprot
Match: D7FV07_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV07_ECTSI) HSP 1 Score: 372 bits (956), Expect = 5.390e-109 Identity = 228/563 (40.50%), Postives = 295/563 (52.40%), Query Frame = 2
Query: 3710 VSASPSSSEGMRLLRSD*MRGRRWRTAPSRI*RRRSSRALAKIAPRAQLREVALLQFEREFMEQPATERDRCRELVVVRGPAVEMAIKCLRDSPAFKGDEGGGNGMALDGRVYAPARWEEILNGPEQALEKMQDVTAFVVLGDKTKKGATKIRLFTIPSANPTTKATNREGRSSAAKDSTANAYAGGREWKAVVLNVFDFVGMSGKLDEREVDVRAAA*HVGGDRSNHALLHGKCCWS*GAKHANKAKGPMKWLEEEIPDGFTYEPFYEADAHAIDLPESIHQGVRPPDLERGSVGVIEYFERELKTKWLKEPELLLVSYDRAALVPVIKGHEQQGRTDKIGGSDRTFGSSSEDPISPSQFQARLRADGKKARDGVATHLAMKVLADPIWSGDDAPTKAVEFYGVGDEPGMGWEEEVGIAAGGVSIVMVGRDSGVSSAGAAAYADGEMRESSAPMPGAGSGSAGTKDDTSGESGLGPRVIKEPLLHFRNGTAGDMGIHRHREPDIGEAELSIVHFIVWDKKYWGNKFRRWLVTSVDTDEWMIIQLAMSTGKIAARGPEAVQVT 5398
VS P + + L + R ++T RI S + K+AP AQLREVA+ FE F+E+P TERDRCREL V R PAV A+ CLR+SPAFKGD+G +ALDGRV+ P +W+EI++ +A KM + + V K KG TK ++F+IP+ N T KAT +GRSSA KDS N+YAGG+EWK + LN+FD G + ++ + A +G A + + GAKHANKA GP KW+ E DGF +PFYEADAH + LP IHQGV P LE+G+ G+I+YF ++L +KWL+ ELL+V YDR LVPVI GHEQ GR++K+G +P S D P V+ G+G E M G+G A + EPLLHFR+GT G+ R R PDIGEAELS++HFI W KKYWG F +W+V+SVDTD WM I LAM+TG + RG AV VT
Sbjct: 10 VSLGPDTFARIGLDERQEVSNRLYKTLTKRI-----SSTIEKLAPIAQLREVAIFNFESHFIEKPRTERDRCRELAVKRAPAVRAAMDCLRESPAFKGDDGKDKVVALDGRVFPPVKWQEIIDAAAKARAKMHECVLYYVFKKKKLKGTTKKKVFSIPARNSTNKATKSQGRSSALKDSVGNSYAGGQEWKVLKLNMFDAAREGGGVVTQDQMLEMVA-SIGA-----ATPYSMANATGGAKHANKAAGPGKWVREHGADGFADDPFYEADAHGVGLPVPIHQGVHPEYLEKGTAGIIDYFRKQLLSKWLQSTELLVVGYDRQELVPVINGHEQLGRSEKLG--------------------------------------------EPDLSADHPP--GVDVEGIGLE----------------------------------------------MAREGAGEALPET--------------EPLLHFRDGTDTIEGVERQRGPDIGEAELSVIHFIAWAKKYWGKSFDKWVVSSVDTDLWMNILLAMTTGWLTPRGERAVDVT 455
BLAST of mRNA_P-littoralis_Contig1120.7.1 vs. uniprot
Match: A0A6H5KTD3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTD3_9PHAE) HSP 1 Score: 363 bits (933), Expect = 5.960e-106 Identity = 217/468 (46.37%), Postives = 275/468 (58.76%), Query Frame = 2
Query: 4106 QDVTAFVVLGDKTKKGATKIRLFTIPSANPTTKATNREGRSSAAKDSTANAYAGGREWKAVVLNVFDFVGMSGKLDEREVDVRAAA*HVGG----DRSNHALLHGKCCWS*GAKHANKAKGPMKWLEEEIPDGFTYEPFYEADAHAIDLPESIHQGVRPPDLERGSVGVIEYFERELKTKWLKEPELLLVSYDRAALVPVIKGHEQQGRTDKIGGSDRTFGSSSEDPISPSQFQARLRADGKKARDGVATHLAMKVLADPIWSGDDAPTKAVEFYGVGDEPGMGWEEEVGI------------------AAGGVSIVMVGR------------DSGVSSAGAAAYADGEMRESSAPMPGAGSGSAGTKDDTSGESGLGPRVIKEPLLHFRNGTAGDMGIHRHREPDIGEAELSIVHFIVWDKKYWGNKFRRWLVTSVDTDEWMIIQLAMSTGKIAARGPEAVQVTCRE 5407
QDV A+ LG K K GATK +F+IP+ N KAT +GRSSA KDS NAYAGG+EWKA+ LN+ D G + ++ + A VG +N + + GAKHANKA GP KW+ E DGF +PFY+ADAH +DLP SIHQGV P LE+G+ GVI+YF+R+L +KWL+ ELL+V YDR LVPVIKG EQ GRT+K+G RTF S DP+ Q+ LRADGK ARDG+A +LAM+VLAD +W+GD P V FYGVG EPG+ + G+ A G++ + R +G+ A Y G A P AG + G + G EPLLHFRNG +G+ R R PDIGEAELS++HFIVW K+YWG F +W+V+SVDTD WMII LAM+TG + RG AV VT ++
Sbjct: 81 QDVAAWRALGTKLK-GATKKNVFSIPARNSINKATKSQGRSSALKDSVGNAYAGGQEWKALTLNMIDAAREGGGVVTQDQMLEMVA-SVGAATPYSMANATGGEEESVRNTGAKHANKAAGPGKWVREHCADGFADDPFYDADAHGVDLPVSIHQGVHPEYLEKGTAGVIDYFKRQLLSKWLQPTELLMVCYDRQELVPVIKGQEQLGRTEKLGECSRTFDPKSTDPVPSLQYGPWLRADGKAARDGIAANLAMRVLADEVWTGDTKPNGIVAFYGVGGEPGLRADHPSGVTRRRFPEPYHSFTFETEXARDGIAANLAMRVLADEVWTGDTKPNGI----VAFYGVGGEPGLRADHP-AGVDAEGVGLEMGGVGATEALSGTEPLLHFRNGNDPVLGVERQRGPDIGEAELSVIHFIVWAKRYWGKNFHKWIVSSVDTDLWMIILLAMTTGWLRPRGEGAVDVTVQK 541 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1120.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1120.7.1 >prot_P-littoralis_Contig1120.7.1 ID=prot_P-littoralis_Contig1120.7.1|Name=mRNA_P-littoralis_Contig1120.7.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=423bp MAVARAAGRIVRADVKKQQNLLNVPRRGDKYNYAAELAMEIQDARKSLPAback to top mRNA from alignment at P-littoralis_Contig1120:18012..27475+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1120.7.1 ID=mRNA_P-littoralis_Contig1120.7.1|Name=mRNA_P-littoralis_Contig1120.7.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=9464bp|location=Sequence derived from alignment at P-littoralis_Contig1120:18012..27475+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1120:18012..27475+ >mRNA_P-littoralis_Contig1120.7.1 ID=mRNA_P-littoralis_Contig1120.7.1|Name=mRNA_P-littoralis_Contig1120.7.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1269bp|location=Sequence derived from alignment at P-littoralis_Contig1120:18012..27475+ (Pylaiella littoralis U1_48)back to top |