mRNA_P-littoralis_Contig1067.13.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1067.13.1
Unique NamemRNA_P-littoralis_Contig1067.13.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig1067.13.1 vs. uniprot
Match: A0A6H5JLI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLI1_9PHAE)

HSP 1 Score: 452 bits (1163), Expect = 1.210e-153
Identity = 238/320 (74.38%), Postives = 270/320 (84.38%), Query Frame = 1 
Query:    1 RASPFPGLSSPGLEVQALRGGG-----KSCPLPSKPTSIKGMLTATRPWSWTAGIIPVLLTGALVRRATAGVSVERAGLANALIMVITLQASGNLVNSYIDHNYGVDTVETAGDRSIVDAHVSPKVALGLAGVTFLAAVAAVVPTMAGLRATGAARELEMTFWVGVGMVFSYTCWPFRLKYRGLGDLTVFLLFGPMLMQVAAMLISGTVQHWVLPFGVPAALLCEAILHANNMRDIEQDRKAGIATLATTIGFQASQFMYFGLLGAAYLVAGVLSAKHYKGSALAFLTLPLAISALKDCNPEDIRNLDEKTAQVDAPTGV 945
            R S   G+S      +ALRGGG     K   LPSKP +IKGMLTATRPWSWTAG+IPVLLTG LV +A  GVS+ + GL+NAL+MV+TLQASGNLVNSY+DHNYGVDT+ETAGDR+IVDAHVSPK AL LAGV F AAVAAV+PT++ +RA+G ARELE TFWVGV MVFSYTCWPFRLKYRGLGD+TVFLLFGPMLMQVAAMLI G+VQHWVLPFGVPAALLCEAILHANNMRDIEQDR AGI+TLAT IGF++SQ +YF LLG AY+VAG L++   +GSAL+FLTLPLAISALKDC PE +R LDEKTA++    GV
Sbjct:   54 RRSSQHGVSRAAYYAKALRGGGALPSKKQAALPSKPMTIKGMLTATRPWSWTAGVIPVLLTGTLVHKAE-GVSMVKGGLSNALMMVVTLQASGNLVNSYVDHNYGVDTIETAGDRTIVDAHVSPKGALVLAGVMFFAAVAAVLPTISRMRASGQARELEATFWVGVAMVFSYTCWPFRLKYRGLGDITVFLLFGPMLMQVAAMLICGSVQHWVLPFGVPAALLCEAILHANNMRDIEQDRSAGISTLATAIGFRSSQVLYFSLLGMAYVVAGCLASTGNRGSALSFLTLPLAISALKDCRPEAVRKLDEKTAKLHLLFGV 372
[Close]
BLAST of mRNA_P-littoralis_Contig1067.13.1 vs. uniprot
Match: D7FHN3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHN3_ECTSI)

HSP 1 Score: 435 bits (1119), Expect = 2.230e-148
Identity = 227/283 (80.21%), Postives = 253/283 (89.40%), Query Frame = 1 
Query:   97 SIKGMLTATRPWSWTAGIIPVLLTGALVRRATAGVSVERAGLANALIMVITLQASGNLVNSYIDHNYGVDTVETAGDRSIVDAHVSPKVALGLAGVTFLAAVAAVVPTMAGLRATGAARELEMTFWVGVGMVFSYTCWPFRLKYRGLGDLTVFLLFGPMLMQVAAMLISGTVQHWVLPFGVPAALLCEAILHANNMRDIEQDRKAGIATLATTIGFQASQFMYFGLLGAAYLVAGVLSAKHYKGSALAFLTLPLAISALKDCNPEDIRNLDEKTAQVDAPTGV 945
            +IKGMLTATRPWSWTAGIIPVLLTGALV +A  GVSV + GL+NAL+MVITLQASGNLVNSYIDHNYGVDT+ETAGDR+IVDAHVSPK AL LAGV F AAVAAV+PT++ +R +G ARELE TFWVGV MVFSYTCWPFRLKYRGLGD+TVFLLFGPMLMQVAAML+ G+VQHWVLPFGVPAALLCEAILHANNMRDIEQDR AGI+TLA  IGF++SQ +YFGLLG AY+VAG L+A   +GSAL+FLTLPLAISALKDC PE +RNLDEKTA++    GV
Sbjct:    2 TIKGMLTATRPWSWTAGIIPVLLTGALVHKAE-GVSVAKGGLSNALMMVITLQASGNLVNSYIDHNYGVDTIETAGDRTIVDAHVSPKGALVLAGVMFFAAVAAVLPTISRMRVSGQARELEATFWVGVAMVFSYTCWPFRLKYRGLGDITVFLLFGPMLMQVAAMLVCGSVQHWVLPFGVPAALLCEAILHANNMRDIEQDRSAGISTLA--IGFRSSQVLYFGLLGMAYVVAGCLAATGSRGSALSFLTLPLAISALKDCRPEAVRNLDEKTAKLHLLFGV 281
[Close]
BLAST of mRNA_P-littoralis_Contig1067.13.1 vs. uniprot
Match: A0A836CHJ2_9STRA (UbiA prenyltransferase family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHJ2_9STRA)

HSP 1 Score: 209 bits (532), Expect = 3.210e-60
Identity = 120/292 (41.10%), Postives = 176/292 (60.27%), Query Frame = 1 
Query:  112 LTATRPWSWTAGIIPVLLTGALVRRATAGVSVERAGLANALIMVITLQASGNLVNSYIDHNYGVDTVETAGDRSIVDAHVSPKVALGLAGVTFLAAVAAVVPTMAGLRATGAARELEMTFWVGVGMVFSYTCWPFRLKYRGLGDLTVFLLFGPMLMQVAAMLISGTVQHWVLPFGVPAALLCEAILHANNMRDIEQDRKAGIATLATTIGFQASQFMYFGLLGAAYLVAGVLSAKHYKGSALAFLTLPLAISALKDCNPEDIRNLDEKTAQVDAPTGVTQGEVNTGVFFFPS 987
            + ATRPWS+T  ++ VLLT ALV  A  G+ +   G    + + I LQA+GNL+NS  D+ YGVD   T GDR +VD  ++ + AL  A V   A    V+P +         R+    F   + +  SYT  PF+LKYR +GD  +F+ FGP+ M  AA++++G  Q+WVLP+ +P  LL EAILHANN RDI++D + GI T+A  +G+Q S+ +Y+ ++  AYL A  LS   Y G  L  L++PLA+S L+  +P  + N+DEKTAQ+     +    +N GV++ P+
Sbjct:    7 IVATRPWSFTVPVMGVLLTSALVH-AQHGMPLLNRGCLEVMTLCICLQAAGNLLNSVFDYTYGVDNPATIGDRCLVDKKITVRGALLFALVLATAGSWLVIPKLLAPD-----RQFLYVFLASIALAVSYTAPPFKLKYRAMGDAVIFICFGPLTMTGAAIVMTGAPQYWVLPYALPVTLLTEAILHANNTRDIKEDARCGIKTVAMLLGYQRSRTLYYAMVAGAYLSALTLS-MQYVGCCLVLLSVPLALSTLRSFSPPTMANMDEKTAQLHLLFSLL---LNVGVYYSPA 288
[Close]
BLAST of mRNA_P-littoralis_Contig1067.13.1 vs. uniprot
Match: A0A7S2UT65_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UT65_9STRA)

HSP 1 Score: 200 bits (508), Expect = 1.380e-56
Identity = 114/283 (40.28%), Postives = 173/283 (61.13%), Query Frame = 1 
Query:   97 SIKGMLTATRPWSWTAGIIPVLLTGALVRRATAGVSVERAGLANALIMVITLQASGNLVNSYIDHNYGVDTVETAGDRSIVDAHVSPKVALGLAGVTFLAAVAAVVPTMAGLRATGAARELEMTFWVGVGMVFSYTCWPFRLKYRGLGDLTVFLLFGPMLMQVAAMLISGTVQHWVLPFGVPAALLCEAILHANNMRDIEQDRKAGIATLATTIGFQASQFMYFGLLGAAYLVAGVLSAKHYKGSALAFLTLPLAISALKDCNPEDIRNLDEKTAQVDAPTGV 945
            + K    A+RPW++TA +IP+ +T AL ++   G  +    L +ALI+ I  QA+ NL NSY D  YGVD   ++GDRS+V+  +SP  AL  + + +L      +P +    A G + E+   F  G+ + + YT  P+ LKY  LGDL +FL FGP+LMQ  A+L++G+VQ  ++ + +P  LL EAILHANN RDI+ D KAG  TLAT +G+Q S  +   ++  AY+ A  ++     G+ + FL+LP+A+  LKD +P+ + N+DE+ AQ+    GV
Sbjct:    3 AFKRYTVASRPWTFTASVIPIAVTAALCKKEL-GAELFSMNLLSALIVGIGCQAASNLTNSYYDFKYGVDNKFSSGDRSLVEKKISPSGALVSSSLLYLVVTMVALPHLWQSIARGGS-EVAWVFLPGMALAYFYTAGPYNLKYHCLGDLAIFLAFGPLLMQFTALLLTGSVQWQLMSYTLPVGLLTEAILHANNTRDIKTDSKAGANTLATVMGYQVSVVLLAVMIIGAYVAAAWITWAESCGAGITFLSLPVALMILKDLSPKKLVNMDERCAQLHLLFGV 283
[Close]
BLAST of mRNA_P-littoralis_Contig1067.13.1 vs. uniprot
Match: A0A7S4DAV0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DAV0_HETAK)

HSP 1 Score: 197 bits (501), Expect = 1.750e-55
Identity = 112/278 (40.29%), Postives = 174/278 (62.59%), Query Frame = 1 
Query:  100 IKGMLTATRPWSWTAGIIPVLLTGALVRRATAGVSVERAGLANALIMVITLQASGNLVNSYIDHNYGVDTVETAGDRSIVDAHVSPKVALGLAGVTFLAAVAAVVPTMAGLRATGAARELEMTFWVGVGMVFSYTCWPFRLKYRGLGDLTVFLLFGPMLMQVAAMLISGTVQHWVLPFGVPAALLCEAILHANNMRDIEQDRKAGIATLATTIGFQASQFMYFGLLGAAYLVAGVLSAKHYKGSALAFLTLPLAISALKDCNPED--IRNLDEKTAQV 927
            I G + A RPWSWTA ++P++LTG L+++ + G+S+       AL + + +QA+ NL NSY+D   GVD  ETAGDR+IVD  ++P  A+ ++ + +  ++    P +    A+     ++  F  G+ + F YT  PF LKY  LGD+ +FL FGP+LM   ++L++G ++  VLP+ +P  LL EAILHANNMRDI+ D +AGI TLA+ +GF  ++ +Y  ++  A+LVA  ++  H  G AL    LPL +  + D  P    ++N+DE+TAQ+
Sbjct:    6 IAGGIIAARPWSWTAAVVPIILTGVLLKKES-GISLLSYDFGAALAIGVLVQAAANLTNSYLDWKKGVDKKETAGDRAIVDGLITPVNAILVSIICYGISILLAFPYLVKHGAS-----VKWIFAAGMLLSFFYTANPFSLKYLCLGDVAIFLAFGPLLMGFTSVLLAGDLRTSVLPYTLPVGLLTEAILHANNMRDIKSDTRAGIYTLASVVGFGPAKVLYAFMVFGAFLVALAMAVTHSLGCALVLPALPLGVRNIADLQPHSPKMKNMDERTAQL 277
[Close]
BLAST of mRNA_P-littoralis_Contig1067.13.1 vs. uniprot
Match: A0A7S3Y1J0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1J0_HETAK)

HSP 1 Score: 173 bits (439), Expect = 3.240e-47
Identity = 97/233 (41.63%), Postives = 150/233 (64.38%), Query Frame = 1 
Query:  100 IKGMLTATRPWSWTAGIIPVLLTGALVRRATAGVSVERAGLANALIMVITLQASGNLVNSYIDHNYGVDTVETAGDRSIVDAHVSPKVALGLAGVTFLAAVAAVVPTMAGLRATGAARELEMTFWVGVGMVFSYTCWPFRLKYRGLGDLTVFLLFGPMLMQVAAMLISGTVQHWVLPFGVPAALLCEAILHANNMRDIEQDRKAGIATLATTIGFQASQFMYFGLLGAAYLVA 798
            I G + A RPWSWTA ++P++LTG L+++ + G+S+       AL + + +QA+ NL NSY+D   GVD  ETAGDR+IVD  ++P  A+ ++ + +  ++    P +    A+     ++  F  G+ + F YT  PF LKY  LGD+ +FL FGP+LM   ++L++G ++  VLP+ +P  LL EAILHANNMRDI+ D +AGI TLA+ +GF  ++ +Y  ++  A+LVA
Sbjct:    6 IAGGIIAARPWSWTAAVVPIILTGVLLKKES-GISLLSYDFGAALAIGVLVQAAANLTNSYLDWKKGVDKKETAGDRAIVDGLITPVNAILVSIICYGISILLAFPYLVKHGAS-----VKWIFAAGMLLSFFYTANPFSLKYLCLGDVAIFLAFGPLLMGFTSVLLAGDLRTSVLPYTLPVGLLTEAILHANNMRDIKSDTRAGIYTLASVVGFGPAKVLYAFMVFGAFLVA 232
[Close]
BLAST of mRNA_P-littoralis_Contig1067.13.1 vs. uniprot
Match: A0A7S0SXL2_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SXL2_9STRA)

HSP 1 Score: 165 bits (417), Expect = 2.410e-43
Identity = 103/295 (34.92%), Postives = 166/295 (56.27%), Query Frame = 1 
Query:  118 ATRPWSWTAGIIPVLLTGALVRRATAGVSVERAGLANALIMVITLQASGNLVNSYIDHNYGVDTVETAGDRSIVDAHVSPKVALGLAGVTFLAAVAAVVPTMAGLRATGAARELEMTFWVGVGMVFSYTCWPFRLKYRGLGDLTVFLLFGPMLMQVAAMLISGTVQHWVLPFGVPAALLCEAILHANNMRDIEQDRKAGIATLATTIGFQASQFMYFGLLGAAYLVAGVLSAKHYKGSALAFLTLPLAISALKDCNPEDIRNLDEKTAQVDAPTGVTQGEVNTGVFFFPSAVLAL 1002
            ATRPWS+TA I+P+++T A+ +++   +   RA     + M IT+QA  NL N+Y D   GVD+ +  G++++V+  VS    L L+ + +L+ +  ++P +     T     L + F VGV + + YT  P  LKY+ LGD+T+FL FGP+LMQ  ++L+ G+    +  + +P  LL E ILH NN RDI+ D  +G  TLAT +G   S  ++  LL  +YL   ++   ++ G   A  T+PLA+S  K      + +L  +TAQ+  P G+    +  G+    S ++AL
Sbjct:   13 ATRPWSFTAAIVPIIITAAVCKKSLFSIEFIRA-----MCMGITIQAGANLTNTYFDFINGVDS-KINGEKTLVERKVSCTEVLVLSLICYLSGLFCILPYLI----TSKNLSLPVIFMVGVALAYFYTANPIGLKYKALGDVTIFLCFGPLLMQCTSILLVGSTTDDLYLYSIPVGLLTEEILHVNNARDIKADSLSGAITLATIVGPDISYLIFLALLIGSYLSIIIIGLIYHWGCLAALFTIPLALSLDKHYREGKMVDLPAETAQLHLPFGII---LALGIALTESGLIAL 294
[Close]
BLAST of mRNA_P-littoralis_Contig1067.13.1 vs. uniprot
Match: A0A482SRC3_9ARCH (Prenyltransferase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SRC3_9ARCH)

HSP 1 Score: 160 bits (406), Expect = 8.310e-42
Identity = 102/284 (35.92%), Postives = 162/284 (57.04%), Query Frame = 1 
Query:   97 SIKGMLTATRPWSWTAGIIPVLLTGALVRRATAGVSVERAGLANALIMVITLQASGNLVNSYIDHNYGVDTVETAGDRSIVDAHVSPKVALGLAGVTFLAAVAAVVPTMAGLRATGAARELEMTFWVGVGMVFSYTCWPFRLKYRGLGDLTVFLLFGPMLMQVAAMLISGTVQHWVLPFGVPAALLCEAILHANNMRDIEQDRKAGIATLATTIGFQAS-QFMYFGLLGAAYLVAGVLSAKHYKGSALAFLTLPLAISALKDCNPEDIRNLDEKTAQVDAPTGV 945
            +I  +  ATRPWS+T  +IPVL+T A+      GVS      A AL M + + A  NL N+Y D   G DT +   D ++VD  +SP   L ++ V +   + +++P    L  + +  ++ + F  G+ + F YT  P  LKY  LGD+T+FL FGP+LMQV+A++++  + + +  + +P  LL E+ILHANN RDI+ D   G  TLA+ +G   S  F  F ++GA   V G+ +  HY G  L+ LTLPL +  +K    + +++L ++ +++  P GV
Sbjct:    4 AIAELFVATRPWSFTTTVIPVLVTAAVT-----GVSFFTPEFARALAMGLFVHAGANLTNTYFDFINGFDTKQHNSDPTLVDKRLSPVTILLMSIVCYTIGIFSILP----LLFSRSYHDIIIPFVSGLVLAFFYTGNPVGLKYIALGDITIFLCFGPLLMQVSAIIMTQKMSYEMYIYTIPIGLLTESILHANNARDIKNDTANGAITLASIMGLTMSYNFFIFLIVGAYLSVLGIAAYFHY-GCLLSLLTLPLGLDLIKKFRDQQLKDLSKEVSKLHLPFGV 277
[Close]
BLAST of mRNA_P-littoralis_Contig1067.13.1 vs. uniprot
Match: A0A7S1Q3E2_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1Q3E2_ALECA)

HSP 1 Score: 149 bits (375), Expect = 9.150e-37
Identity = 114/297 (38.38%), Postives = 163/297 (54.88%), Query Frame = 1 
Query:   82 PSKPTSIKGMLTATRPWSWTAGIIPVLLTGALVRRATAGVSVERAG---LANALIMVITLQASGNLVNSYIDHNYGVDTVETAGDRSIVDAHVSPKVALGLAGVTFLA-----AVAAVV----PTMAGLRATGAARELEMTFWVGVGMVFSYTCWPFRLKYRGLGDLTVFLLFGPMLMQVAAMLISGTVQHWVLPFGVPAALLCEAILHANNMRDIEQDRKAGIATLATTIGFQASQFMYFGLLGAAYLVAGVLSAKHYKGSALAFLTLPLAISALKDC----NPEDIRNLDEKTAQ 924
            P+KP  + G+LTA R WS+T+ + P L+  A++R       +E  G   +   L+ ++ LQA+ NLVNSY D   G+DT ETAGDR++VD  VS  V + LA    L      A + VV    PT+ GL   G A  L             YT  P  LKY GLGDLT+F+ FGP ++  ++ ++ GTV+   + F +P AL   AILHANN RDIE D + G  T+AT +G + S   Y  LL  A+L  G L+A ++   A A ++L +A  +L  C    + + +   DE+TA+
Sbjct:   48 PAKPGLVVGLLTAMRVWSFTSTVSPQLVALAVLRFHC---RIELPGCFAILALLVSLLALQAAANLVNSYKDFERGIDTKETAGDRTLVDNLVSVPVLVALAASCLLGWCAYFAWSVVVTDFSPTVVGLAILGTALAL------------GYTAGPAPLKYVGLGDLTIFVCFGPAVVAYSSTVLVGTVRWEAIAFTMPVALYVVAILHANNYRDIEADSRTGARTVATFLGPRVSVIYYDLLLSCAHL--GALAAGYHYSCAGAVVSLLVAPQSLWLCRRIRSNDMLHTQDEETAK 327
[Close]
BLAST of mRNA_P-littoralis_Contig1067.13.1 vs. uniprot
Match: L1J8P6_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J8P6_GUITC)

HSP 1 Score: 146 bits (368), Expect = 2.740e-36
Identity = 94/271 (34.69%), Postives = 153/271 (56.46%), Query Frame = 1 
Query:  109 MLTATRPWSWTAGIIPVLLTGALVRRATAGVSVERAGLANALIMVITLQASGNLVNSYIDHNYGVD--TVETAGDRSIVDAH--------VSPKVALGLAGVTFLAAVAAVVPTMA-GLRATGAARELEMTFWVGVGMVFSYTCWPFRLKYRGLGDLTVFLLFGPMLMQVAAMLIS--GTVQHWVLPFG--VPAALLCEAILHANNMRDIEQDRKAGIATLATTIGFQASQFMYFGLLGAAYLVAGVLSAKHYK-GSALAFLTLPLAISAL 873
            ++ A RPW++ A ++PVLLT  LV R+  GV+     +  A+++ + +QA+ N++N+Y D+  GVD   V +  D S+V  H        + P+  L LA V + +++  ++P  + G R       + + +  G  + + YT  PF+LKY  LGD  +F+ FGP+L+    +L++       W   FG  +P + +CE ILHANN RDI +D KAG+ TLAT +GF  S+ +Y GL+ AAY+   ++S    + G  +  L+LPLA   +
Sbjct:    4 LVVAMRPWTFPAALVPVLLTVTLVHRS--GVAWSLPEMIRAILLGVIVQAASNVINTYWDYENGVDGPNVGSGADPSVVLPHKVVLVGGGLKPRSVLALALVLYGSSLLVLLPRFSDGYR-------IPLLYLCGTSLSYFYTAPPFKLKYFALGDAAIFIAFGPLLVYCTILLVAPKSVDALWGEVFGYTIPCSFICECILHANNSRDIGEDSKAGLVTLATILGFNGSKRVYVGLITAAYVTVIIMSVGQRRLGMMMVLLSLPLAFDVI 265
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1067.13.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JLI1_9PHAE1.210e-15374.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FHN3_ECTSI2.230e-14880.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CHJ2_9STRA3.210e-6041.10UbiA prenyltransferase family n=1 Tax=Tribonema mi... [more]
A0A7S2UT65_9STRA1.380e-5640.28Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S4DAV0_HETAK1.750e-5540.29Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3Y1J0_HETAK3.240e-4741.63Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S0SXL2_9STRA2.410e-4334.92Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
A0A482SRC3_9ARCH8.310e-4235.92Prenyltransferase n=1 Tax=archaeon TaxID=1906665 R... [more]
A0A7S1Q3E2_ALECA9.150e-3738.38Hypothetical protein n=1 Tax=Alexandrium catenella... [more]
L1J8P6_GUITC2.740e-3634.69Uncharacterized protein n=1 Tax=Guillardia theta (... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1067contigP-littoralis_Contig1067:10918..19695 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FHN3
Preferred nameUBIAD1
PFAMsUbiA
Model size1549
Max annot lvl2759|Eukaryota
KEGG koko:K20824
Hectar predicted targeting categorysignal peptide
GOsGO:0000139,GO:0001885,GO:0001932,GO:0001933,GO:0002064,GO:0002164,GO:0002376,GO:0002520,GO:0002682,GO:0002683,GO:0003158,GO:0003674,GO:0003824,GO:0004497,GO:0004517,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005740,GO:0005783,GO:0005789,GO:0005794,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0006766,GO:0006775,GO:0006950,GO:0006996,GO:0007005,GO:0007275,GO:0008150,GO:0008152,GO:0008285,GO:0008592,GO:0009058,GO:0009108,GO:0009110,GO:0009233,GO:0009234,GO:0009636,GO:0009653,GO:0009791,GO:0009888,GO:0009892,GO:0009966,GO:0009968,GO:0009987,GO:0010563,GO:0010605,GO:0010646,GO:0010648,GO:0012505,GO:0016020,GO:0016021,GO:0016043,GO:0016209,GO:0016491,GO:0016705,GO:0016709,GO:0016740,GO:0016765,GO:0019220,GO:0019222,GO:0023051,GO:0023057,GO:0030097,GO:0030154,GO:0030173,GO:0030855,GO:0031090,GO:0031224,GO:0031228,GO:0031300,GO:0031301,GO:0031323,GO:0031324,GO:0031399,GO:0031400,GO:0031966,GO:0031967,GO:0031975,GO:0031984,GO:0032194,GO:0032268,GO:0032269,GO:0032501,GO:0032502,GO:0032989,GO:0032990,GO:0033554,GO:0034405,GO:0035166,GO:0035167,GO:0035203,GO:0035204,GO:0035206,GO:0035207,GO:0042127,GO:0042175,GO:0042180,GO:0042181,GO:0042221,GO:0042325,GO:0042326,GO:0042362,GO:0042371,GO:0042373,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043408,GO:0043409,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044431,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045446,GO:0045595,GO:0045596,GO:0045610,GO:0045611,GO:0045613,GO:0045614,GO:0045751,GO:0045936,GO:0046578,GO:0046580,GO:0048468,GO:0048513,GO:0048519,GO:0048523,GO:0048534,GO:0048542,GO:0048569,GO:0048580,GO:0048581,GO:0048583,GO:0048585,GO:0048731,GO:0048732,GO:0048856,GO:0048869,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051056,GO:0051058,GO:0051093,GO:0051171,GO:0051172,GO:0051174,GO:0051186,GO:0051188,GO:0051239,GO:0051241,GO:0051246,GO:0051248,GO:0051716,GO:0055114,GO:0060255,GO:0060429,GO:0065007,GO:0070584,GO:0070887,GO:0071498,GO:0071704,GO:0071840,GO:0072358,GO:0072359,GO:0080090,GO:0097237,GO:0098588,GO:0098754,GO:0098791,GO:0098827,GO:0098869,GO:1901576,GO:1901661,GO:1901663,GO:1902531,GO:1902532,GO:1903706,GO:1903707,GO:1990748,GO:2000026
Exons9
Evalue3.7e-150
EggNOG OGsCOG1575@1|root,KOG4581@2759|Eukaryota
Descriptionvitamin K biosynthetic process
Cds size903
COG categoryH
BRITEko00000,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1067.13.1prot_P-littoralis_Contig1067.13.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1067 11026..19157 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789397.9793837-UTR-P-littoralis_Contig1067:10917..110251680789397.9793837-UTR-P-littoralis_Contig1067:10917..11025Pylaiella littoralis U1_48UTRP-littoralis_Contig1067 10918..11025 +
1680789398.078589-UTR-P-littoralis_Contig1067:19157..196951680789398.078589-UTR-P-littoralis_Contig1067:19157..19695Pylaiella littoralis U1_48UTRP-littoralis_Contig1067 19158..19695 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789397.9920652-CDS-P-littoralis_Contig1067:11025..110281680789397.9920652-CDS-P-littoralis_Contig1067:11025..11028Pylaiella littoralis U1_48CDSP-littoralis_Contig1067 11026..11028 +
1680789398.0003934-CDS-P-littoralis_Contig1067:11461..115431680789398.0003934-CDS-P-littoralis_Contig1067:11461..11543Pylaiella littoralis U1_48CDSP-littoralis_Contig1067 11462..11543 +
1680789398.008651-CDS-P-littoralis_Contig1067:12671..128071680789398.008651-CDS-P-littoralis_Contig1067:12671..12807Pylaiella littoralis U1_48CDSP-littoralis_Contig1067 12672..12807 +
1680789398.0186415-CDS-P-littoralis_Contig1067:13168..133571680789398.0186415-CDS-P-littoralis_Contig1067:13168..13357Pylaiella littoralis U1_48CDSP-littoralis_Contig1067 13169..13357 +
1680789398.0313764-CDS-P-littoralis_Contig1067:14340..144041680789398.0313764-CDS-P-littoralis_Contig1067:14340..14404Pylaiella littoralis U1_48CDSP-littoralis_Contig1067 14341..14404 +
1680789398.0395906-CDS-P-littoralis_Contig1067:15660..158101680789398.0395906-CDS-P-littoralis_Contig1067:15660..15810Pylaiella littoralis U1_48CDSP-littoralis_Contig1067 15661..15810 +
1680789398.0507817-CDS-P-littoralis_Contig1067:16792..169511680789398.0507817-CDS-P-littoralis_Contig1067:16792..16951Pylaiella littoralis U1_48CDSP-littoralis_Contig1067 16793..16951 +
1680789398.0591927-CDS-P-littoralis_Contig1067:18431..184641680789398.0591927-CDS-P-littoralis_Contig1067:18431..18464Pylaiella littoralis U1_48CDSP-littoralis_Contig1067 18432..18464 +
1680789398.070388-CDS-P-littoralis_Contig1067:19070..191571680789398.070388-CDS-P-littoralis_Contig1067:19070..19157Pylaiella littoralis U1_48CDSP-littoralis_Contig1067 19071..19157 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1067.13.1

>prot_P-littoralis_Contig1067.13.1 ID=prot_P-littoralis_Contig1067.13.1|Name=mRNA_P-littoralis_Contig1067.13.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=301bp
MLTATRPWSWTAGIIPVLLTGALVRRATAGVSVERAGLANALIMVITLQA
SGNLVNSYIDHNYGVDTVETAGDRSIVDAHVSPKVALGLAGVTFLAAVAA
VVPTMAGLRATGAARELEMTFWVGVGMVFSYTCWPFRLKYRGLGDLTVFL
LFGPMLMQVAAMLISGTVQHWVLPFGVPAALLCEAILHANNMRDIEQDRK
AGIATLATTIGFQASQFMYFGLLGAAYLVAGVLSAKHYKGSALAFLTLPL
AISALKDCNPEDIRNLDEKTAQVDAPTGVTQGEVNTGVFFFPSAVLALFG
*
back to top

mRNA from alignment at P-littoralis_Contig1067:10918..19695+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1067.13.1 ID=mRNA_P-littoralis_Contig1067.13.1|Name=mRNA_P-littoralis_Contig1067.13.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=8778bp|location=Sequence derived from alignment at P-littoralis_Contig1067:10918..19695+ (Pylaiella littoralis U1_48)
CGTGCGTCGCCTTTTCCAGGTTTGTCTTCACCAGGGCTAGAGGTACAGGC
TCTGCGAGGAGGGGGGAAAAGCTGCCCGCTGCCCTCGAAGCCCACTTCAA
TCAAAGGAATGGTGAGAAGACATAAACAAACTGGCGTTCTGTCTATAACG
CAAAACAACAAAAATATGGCCGACAGAACGAAACACAGCCAACGGGTTGG
GCGCGGCCCCTCCCCATCCCCTTATCAGCACGCGGCACCCATCATGGGCG
GTTCTTGGAACTACCTGGGATAGGATGCTTGAATCTGCTACTCTGACGTA
TTTTTTTTAGAAAACTCGAGAATACTGCTGCATCGTACATACTTATCGGC
TTCCAACAGTGTCCAAGCCATTTGCTCTAGTCGAACGCCAGCGCCATTGT
TCACTCAACCGCCGCCGGTGAAAACTACATGTCGTACAACAAATGCGTAG
ACTTTCGACCGAACCTACGAGGTACGACATTGATGCAGCAGCCCCTCTTT
CCTGCGTACCCACCCTCCGTGCTTTGTGTTCCTATTTGCTCTAGCTTACC
GCCACGCGGCCTTGGAGTTGGACGGCAGGAATAATACCCGTTCTTCTCAC
AGGAGCCCTCGTGCGCAGGGCAACAGGTATCTGGACATCACCTGCTGTGT
AGAAAGAGACGGGAAGTACCAATAGAACCGAATACACCTTGGAAGGAAAT
ACTTGTAAAGTTGAGATGCACGATATGACTCGTTGTTACAGCAGCACTGC
TCTTCGCAAGAGAGATGAAAGACGAGCGCAATACCACGGGAGAGATTTCT
CGCGACTATCAAGCAAGAGAGTCGTGCACAAGTTTGTTCGAAAAGGCTGT
AGGTTAGTCGGATCGAAGGGGTGTAATGTTGCGCTCCGTGCCACACCCAA
TGTAGAACGTTTTCCATGGGTTTCAAGAATGATTTCCATGTGAAATTCCA
GGTACATACTAAAATGTGTAGAATGTCAAGGAAACGATCATGTGGGGTGT
TGATAGGATATCAACTTTACGTGTCTTCATACAGATGATAACTAGTTATA
TTCATCGGGTTTCTCCGGAGAAGAATGAAAGATTAACAAAGGGTATATAA
TATCCCGTGGGGTTCCAAACAATGCCTCTCTTGGATACCTGGGATTTTGA
AAGAGTGTTCTACGAACGTGTCATGCTGCTTTTCCGACTTGAATTTTTGA
AGGTTGATCCCTTCATTGGTACCCCCCCCCCAAAAAAAAAATAATTCCGC
AAGTAGAAACGGCTAAAAAGAACAGGGGACAGCACAAAGAAGGCCCCGCC
CCGTGGGACACCAATCGAGACCAGAACTTCTGGAGGTGACGCCTTCACGT
TCCAAGGATGGCCAAGGGAAGTTTGGTGGGTGTGGAGTTCGGCTGTGGCG
AGAGTCTGAATCATGTTTCTGCCTCAACCCACGCTGCCGTCAGAATCACG
CCACAGCCAAAGCCCACACCCACGAAACTTCCCGCGGCCAAACTCAGAAC
GCTGGAGCGCACGCTCCGAACAGGTTTTTATTGCTGTTGGTGTCCCAGGG
GCCGAGTTCTGGTTGGTGCCGTCTCTTGTTGGGCTTAACGGAGCCCTTAG
GGGGATAGAAGGCTTCTTCTGTTTATTTTTGGCAGGCGGTGGAAAATCCA
CACCAACATTCTCTGGACCGCAAGGACCGTAAGAATCTGCCTCGAGAACG
TGCGATGGGTGTTGAAACGTATTCTTGTAATACCTTCGTCTTTGTTGCTT
TGAGCAGGCGTGTCTGTGGAGAGGGCGGGATTAGCGAACGCACTGATCAT
GGTGATCACTCTGCAGGCCTCCGGAAACCTGGTGAACTCGTACATTGACC
ACAATTACGGAGTAGACACCGTTGAAACTGCGGGCGACAGGTGCAGTAAA
ACCAAATCGGCGAGGAACTTTACTGTGCTCAGGCACCCAGTGGGCCAATG
CGGGAACACGTTGCATTGGAGCTTGTGTTTCATTTCATTATCATTCTGTA
GTGCTGTCTTGGCGTTAAAACCTGTCCCGACTTGCTGCCATGACACCTTG
GCATGACAATGGCACTATAATAACAATTTAGACCACCAGACTACTTGGCC
ATTTGGCCTACCTATTTATCATCACTGTACATACTCGTTTGTACATTTGC
TGTTTTTATGGGACCTAAGCATGCCTGTTTGGCCTAACTTGACGATCAAC
ACAATATTATACTTCGCATCATTCTCGGATTTTTGTTTTTTGCAATGTCA
GGAGCATCGTAGACGCACATGTCAGTCCGAAAGTGGCGCTAGGCCTCGCC
GGCGTGACATTTTTGGCAGCAGTGGCGGCGGTTGTGCCCACGATGGCCGG
GCTTAGGGCGACCGGGGCGGCCAGGGAGCTAGAGATGACCTTCTGGGTCG
GGGTAGGCATGGTGTTCTCGTACACCTGCTGGCCGTTTAGGTGAGCAAGG
CGGTACAGTAGCCCCGGACGACACATCAAATGATATTGAAGGCCTGCCGC
CATGTCTGTATGCATGTCATTTGTGTGTGTGTGTTTTATCTTCTCGTCTA
ATCTGGACGCCAGCCGACACCCTCCGGTACGCGTTGAGCGAATCGGACGG
GGTTGTTAACACAGGAGTAAGGTCGGGCAAAGGTTTGTTTTGCCATTATA
GATCATACCTCGAGCTTTTTGCACCATGCGCGTGTGTTTTTGCAAATATA
TATATATATATATATACATTGTGCTTGGCCACTTCTCTACCGTGTTTGGT
TGTTGGGAGGGTGAGTCAGAGCGCTTTAGCAATGCCGCTGGTTTTGTAGT
TGCTGTCGCTGTTTCCCTCGCTCGTCCCGAAAAAAAAAGGAGGCCGCGGT
CACAACAGCAGTAGTGCTGGAACACGGGATGGGTGCGCATATCATGCGCA
AGAAAATACCTAGGCTGGGAATCGCGCCCTATTTGTTGGAAGGGAGTGAG
TCGACTGCGCGTTTGCCTACTAGACACTGCTGGCCGTTGGAAGAGATGGG
CACCCCTGGATTGAACACGTACAGAGCAGTGTGTTTTTAAACATCATACG
AAGTATCGTATTGCCATCGTGGTGTATTGTTGGCAGTACGCAGTACGTCG
AACGGCTTTCGGCAGGTGATGCAAGAGGTGAACGCAGGGTGAAATTATTC
AACCGATGTTTTGCGGACGAGACACAAGGTTGGTATGCCATTGACAGACT
CGAAAAGAGGAGGGCTGTGCTGCACACTGTACACCCGACCACCCCGCTGT
GTTGTCGTATTCATACTTTATGCTTCGTATATTTTTACTATCGTTTTTTG
CACTCAACGTTATTGCCGGTACAATTTTTTTTTTTTTGTCATGTCCATAT
TCGGTTTGGGCACTCAATGTCATTGCTGAAACAATTTCACGTTTTTTTGC
CCTTTCATGTTCTGATCTGGCAGACTCAAATACCGTGGGCTCGGTGACCT
CACGGTCTTCCTTCTGTTCGGGCCCATGCTGATGCAGGTCAGCTCAAGCT
AGATACTTGTACAAGATTCGTGTTGCTGTTGTTGCTGATGCTGGTGCGGT
GGTGATGCTGGTACAAATAACTGCCTTTTGTGGTCGATGCTGTTTTTGAC
GATTGATGATGGTGATGGTGGTGGCTATGGTACGACGAATTCTCTCGCGT
ATTCGTTGCTTGGATAGAGCTACGCTGGTGTGGGGGGGGTCTGAAGGCTT
CACCTACAGCTTTTCTTGTTACCTGTGTTCTCGTGACAGATCGTTTCCGA
GCATTGTCGGCAAACGCCACTGCCGTTTCATCTTTCCAATCTCTCGGTTG
GCGTGCCGAAAAATGAAGCGTTCGAGGTCGATTCACGGGGGAAATGGGCG
CACATGTATGCTAGTTTCCGTGTCTTACGGGAAAGCGGTGTCTAACCACA
TGCTGTACGGCACGTGGTGTCTAAACAAGTGCTAAGGGTAGCAGAATATC
TGCCATTTCTATGACCGAATGTGAAGTGTTTTGCGGATTGCAATGCATAA
TCTGTTCGACTATTTCGGGACTTTGGGCCCCCTCGGCAGGTAGGCCGGCG
CTGCAAGTGGTTCGATGTCGCCTGTTGTTGTTGCCTCTCACTCAGGGATC
ACATTCGACCACACGAAGTATAGCACCAAGTGGGATTTGTCACGATTAGC
GATACTGCTGTACAGCAGTGTTCATCGTACACACCAATAGCAACCGGGAC
CTTCCTCCCTCCCTTGGTATTAGTGTCGACGCTTGAAGTCGTACCCCAGA
CGTCCTCTTTGCTGTACGCACGAGATTCGACCACCGGGACGGCCCTGTAT
CTCAGCAAGCATCGACGATTTCTGCACCCGTGTGTGCGCATGTGCATACA
TATCACAACATTGAAAGATGTTAGACCTTCGGCTTTCCCAAGCTCGTGCT
TGATGCGTCGCACCGAACGTCTTTTCACTGATCCTGCCGGGGTGCCCCTT
CTTCCGAACAGCAGTCCGTTTCATTTCATTTCATTTCACGCATCGATATT
CCGCGCCTCACTTTTGGGAGTTTGACCCCCATTTCGATTTGCCTCTCGAA
AAACATCAGAACAACCACCCAATTTTTTGTTTTCTGTACTCGTAGATATT
AGAACATCCACCACCTGTTTTTTTTCTTCAGACATTAGAACAACCTATTT
ATTTTATTGTTTAGACATATGAACAACCACCACTTTTTTTTTTTTACCAG
GAGTGTAAAAGCAAACGCCCGGGCCCGTAAAATATGCCTCCAGGTGGCGG
CGATGCTCATCTCCGGCACGGTGCAGCACTGGGTGTTGCCGTTCGGAGTC
CCCGCCGCCCTCCTGTGCGAGGCCATCCTCCACGCCAACAACATGAGAGA
CATCGAGCAAGACCGGAAAGCGGGCATCGCCACGCTGGCAACGGTGAGGT
CAACTTAGCGGAGAAATTTCTGCCTTTCGTTGTGGTGGCATGAGGGAATC
GCCACGCTGGCAACGGAGAGGTCAAAGTAGTGCAGAATTTTCTTGTTTTT
TGTATCGGTGGTAGCATAGCACCAGATGCGCTGCGCGGTATCGTGCTTCG
TCGTGGTATGACAGCGTACAAGTCGTGCAGTGTAGTGTTGGGTTAGGGTT
AGGGTTAGGGTTAGGGTTGGCCCGGCGGGACCGCAAAGTCGATATTGGCG
TTTTTTTACGGGCATGGACGATGTTGACGTTCGTTCAAGCCAAGCACCGA
CCATTGTCGCAGATTCACGTCGTCGAGGAACGTCGAAGACATGCAATCGT
TGGTCCGTGCAGGCACTGGGTGCAGAGTACTGCGGCGGACATGACGAGCA
ACCGCAGAAAATGCCATGCAGCAGAAGGCGGATGGAGACATCCCCCGCTC
CGTATGACGCCCATTTTTGTGCCGTGTGACGTGTCGCGTCAAAAAATGTA
ATGTTTTTCTCCGACGCAACCGGTAACTGCTCTCTCAACATTTTCCTCAA
CCTCACATTTTCTGGGCCTAGTTCGCGGCGAAGACTGGCCAAGGCCTACG
AGACACTTTTACAAGACGCTTGGAAGTTAGATTGACAGCAGCAGCAGGCA
CTCATCGGTCGCTACAGCAGTAGGGCCGAATAACGACGTTTTCGTGGCAC
ATATTTTTGGAAATCTCCTACTCAGCGTTTCATGTACTCGAGGGACCTTT
TCGTTTTTAGAGGGCGGGTGTAATATGGTATGTAGAGATGTCGGTCGAGG
CCAGTGTGAAAACGATTGGTGTGACGTACCAGGAACATACTTGTATGCAT
GTACAATAGGGTGTGATCTCTGTGAAATATAGAGGAGAAACCCGCCGTGC
CGCTTGCTGAATGTCTGAATGTCTGAATGTCTTCTTTTCGGTCAATGTTG
ATGTTTGCATGGCGGATGCACGCAGACGATAGGGTTCCAGGCGAGTCAGT
TCATGTACTTCGGCTTACTTGGAGCGGCCTACTTGGTGGCCGGCGTGCTG
TCAGCGAAGCACTATAAGGGGTCCGCGCTGGCGTTCCTGACCCTTCCCCT
TGCCATTTCGGCCCTCAAGGATTGCAACCCAGAGGTGAGAACGATTGCTG
CTGCTCCTTTGTTGTTTTTAGTCTCGCACGGTGATGGAAAGCCCCACGGG
CGCTAGAGGTTCCCGGTCGTTGAATGTACGTGTTTGCTGCAGCTGTAGGT
TGCGATAAGGGTGCACGCGAACTCGTATGGACCGCTTTAAACTAAATTCA
AGCTGGATTTGTCTTCGAGAGTAAGAACCGCCGGCTTTCTTGCAAGGCGG
TAAATAAATACGATAGACGATATGGGACACGCAGCTTCCAAGATGGGGCC
GCAAGTTTGCGAAATGAGCATGTCAGGCTTTTTTTGTGGCTAGTGGCGCG
CGCGCTTGTGTGTGTGTGTGTATATGTGTGTTTTATCGAGTAAGAGCCGT
TCCGATCTCTGGTCAGTACCTTCTGGTGTACGTACTGCTGGCTCATCCGT
CCGATGGGGGACGCTTTCCGTGATCACAGGCTACCAACCGAAAATAAGGG
TATAGAGTATCGGTACCTTCGAGTGTCCGTCCGTACTGTTGACTCATCCG
TCCGACAGAGGACGCTTTCCGTAATCACAGGCTGCCTACCCAAAAAAAGG
GTAAAGAGTACTGGTCCCTTATAATGTTTGTACTGCTGACTCATCCTTCC
AATAGGGGACGCGTTTCGTGCTCACAGGCTACCAACCCAAAAAAAGGGCA
TGTAGTATCGGTACCTTCTATTGTCCGTATTGCTGACTCGTCCGTCCGAT
AAGAGACGCTTTCTGGTCACAAGCTACCTACCCAAAATAACACGAGTATC
TATGATAGAAGGCGGAAAAATGTCAAGATACCCAAGAAACGTGTGAAAGT
ACACCTCTAATACTTTCGTTTTATCATTCTACAGCTGTTGAAAAACAGAG
GACAGGAGAGGCTGCTACAGAACTCGTACGGGTTTGAGATGAAAGCCCCT
CGGTCCTGACAGGTGGTAATAGGAGTTTTGGAGGTCCCACCTTGGCGTGT
TTCCTGGCTCAAGCTATTTGTGTCCGGATAAAAATGTTGCCCTTGTTGTT
CGCTTAGCAACGGTGTATTTTTTTTTCATCCTCCGGTCAAGGGCTGTGCA
GGCTCTTCGTGCCGATGTGCGCATGTGGAAACATGGAGTAAGGAAAAAGT
GACGCTGCTGGTAGTAAATATTCCAGACCTTCAAAAGGCTCTGAATTTGC
GCACAAAATACCAAAAAGGTATTGAGGGAAGTGACTAGACTTATTCCAGC
AGTCATTGGATGCGCCGTGTCCCAGCACGCTCTCATTCGACGTGTTTACC
TAGCTCCCACCAAGCGCAAGCGTTGCGCATGTATCGTACTCGTATTCAAG
AAGAGCTCAGGGTGTTTTCACACATCAGCACATGGAGATGTACTTCGAAG
TATGAGTTAAGAGGTTACGGCGCGGCTTGGTTTTTGCCGACTACCCTTTT
TTTTTACCCTCGCGTGTGTTTTCGCCTGTTTCCTTGGTTGTTGTTCTGCG
CGTTCTTTATGCAGGACATTCGCAACCTGGATGAGAAGACAGCTCAGGTG
AGCTAGGGTTGTACCTTAAAATGACCAAAGTACTTTCAAGCGGGTTGGAG
TTGTACCTTACGTTGTCAAAACACGGGTGGGTAAATATGTAAAATTGGAG
TTGTATCTTGTTTTGTCAATAAAGATGGCGAAGGCAGTTTAGAGTTGAGC
CTTTTATTATCAAAGTACGCCATCCCACTGAGGTGTGTTGGAGTTTTACC
TTATATTGTTAAAGGACGTTGTCCCACTACGGCTGACCGAATTATACTCG
TGTACATGAGTCACCTTGTACCTGTTGTGTCTCCTGCTCTTGCTCGTCCG
GCGCACCGACCTTTTAAGGCGGATGTGACCTGTGTTGATAATGGCGTTGT
CCCACTTGTCCCACTTGTTCCACCTCGTTTCATCGTTTAACATCCGAACA
CCTCGCATTGTACCTACTGAGTTCGCCTGTTTCTTTAGCTGTCCGTCTCT
CAGACCGGCTTGTTTTGCTCCAAGTTTCAACACTGCTGCCTCGTGCCTCC
ATCTCGCCCAATCGTTTTACGTTCACCGATCCATGCCCTTTTTTCGTATT
GTGTGTGTGTTGTCGTTCCTTTAATTGGACGCCACTCTACACCTTTCGGG
TAGGTCGACGCTCCAACTGGGGTCACACAGGGGGAAGTCAACACAGGCGT
TTTTTTTTTTCCCTCTGCGGTGCTTGCCTTGTTTGGTTGAGCTTTTATCG
GGAGAAAGGGGACAGCAATTCCCTTTCCCTCGTCGATGGTACGATCGAAT
TTTTGTTTACTCACGAATCAATCGCTTTCCACTTTCACGCGCATTGTGAG
AAGAAAACCCAGATCGTGTTACTGCACTGCATTCGAACTTACGCATGAAT
GTCAGGAGGTGACGTGGATCACCAACTGAACCACCGGGGCGACCGGCATT
TTGGATGTGCTATTTGCTTGTAGATTAGCCCCGGCCATTTGTCGGTTTAA
CATATACCACGACCCTGCCTTTGACTCCGACGTCATGTCATGAATTTCCT
CTCTTCATATCATTGAATTATTTGGCCTTGCATCATTTGTTCAACTCGCC
TGTGTTCCACCTCAATTTTTTTACCTTCAAGATTTGAGCCCCCTTTGAAG
ATGTGCGGTTGACCTTCTACCTTGGGGCATACCCTCGTTCGCCTTTGTTG
CGAAGCTTCACGGGCTTGTGTTCATCGTGTTCCAGGTAGCGTCTTGAAGA
ACGCCGCCAATTTCTACTCGAAAACTCG
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig1067:10918..19695+

>mRNA_P-littoralis_Contig1067.13.1 ID=mRNA_P-littoralis_Contig1067.13.1|Name=mRNA_P-littoralis_Contig1067.13.1|organism=Pylaiella littoralis U1_48|type=CDS|length=903bp|location=Sequence derived from alignment at P-littoralis_Contig1067:10918..19695+ (Pylaiella littoralis U1_48)
ATGCTTACCGCCACGCGGCCTTGGAGTTGGACGGCAGGAATAATACCCGT
TCTTCTCACAGGAGCCCTCGTGCGCAGGGCAACAGCAGGCGTGTCTGTGG
AGAGGGCGGGATTAGCGAACGCACTGATCATGGTGATCACTCTGCAGGCC
TCCGGAAACCTGGTGAACTCGTACATTGACCACAATTACGGAGTAGACAC
CGTTGAAACTGCGGGCGACAGGAGCATCGTAGACGCACATGTCAGTCCGA
AAGTGGCGCTAGGCCTCGCCGGCGTGACATTTTTGGCAGCAGTGGCGGCG
GTTGTGCCCACGATGGCCGGGCTTAGGGCGACCGGGGCGGCCAGGGAGCT
AGAGATGACCTTCTGGGTCGGGGTAGGCATGGTGTTCTCGTACACCTGCT
GGCCGTTTAGACTCAAATACCGTGGGCTCGGTGACCTCACGGTCTTCCTT
CTGTTCGGGCCCATGCTGATGCAGGTGGCGGCGATGCTCATCTCCGGCAC
GGTGCAGCACTGGGTGTTGCCGTTCGGAGTCCCCGCCGCCCTCCTGTGCG
AGGCCATCCTCCACGCCAACAACATGAGAGACATCGAGCAAGACCGGAAA
GCGGGCATCGCCACGCTGGCAACGACGATAGGGTTCCAGGCGAGTCAGTT
CATGTACTTCGGCTTACTTGGAGCGGCCTACTTGGTGGCCGGCGTGCTGT
CAGCGAAGCACTATAAGGGGTCCGCGCTGGCGTTCCTGACCCTTCCCCTT
GCCATTTCGGCCCTCAAGGATTGCAACCCAGAGGACATTCGCAACCTGGA
TGAGAAGACAGCTCAGGTCGACGCTCCAACTGGGGTCACACAGGGGGAAG
TCAACACAGGCGTTTTTTTTTTTCCCTCTGCGGTGCTTGCCTTGTTTGGT
TGA
back to top