mRNA_P-littoralis_Contig1065.2.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1065.2.2 vs. uniprot
Match: A0A6H5L0L4_9PHAE (Helitron_like_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0L4_9PHAE) HSP 1 Score: 1363 bits (3528), Expect = 0.000e+0 Identity = 708/963 (73.52%), Postives = 768/963 (79.75%), Query Frame = 1
Query: 1 RQAERFGQQHDAGLLPFAPIIKERPVLAFDHGQGRIDGHDKPHMLDDILHPSVMHKCLSDFDSFMVNSIRRCESNARCTLSTSCAVCDRYCREKDYKLVSVNDLPQKHLLLANDSLLNCAAVKHEFFNYPGDDGNILDGHVVARQGFETDG--RLRVCVECLNSLLKDKMPETALANGLWLGDFPEHLRSATFVEMVAASPVRISGMVLALDELRVGNIGGSARSLMRGTFTFYMQDAYGVQLRLPACDTDIAGSFTCALVGAKPSVAQLRKLFGARRKMVEDLLAFQLDASNDLVGVHELAREAQLSKDNLDTYNEDGSIPQAILDAMIPVKDTTNAYANAHSTHAHGNREPE----------TVDHRGDAEGGGHGPVDTATTPPFIIEANAIMPSGDDLAVSSHAKPGRLRTLGSSLKSPHRGRPSGASAT---ASLAQLAAAQAREARGQAPDGTDNALVVTHSGRMVSDVTNPGLFVGAYFDLFPHGVGGHLDKRPRPLDLKKWAQIFLWRRDPGFRKNRTSLYCVCSLIFRREAISNARWKLSGRVSRGMAADIASVTAQDLRAVASEMETGSSGFSALADRPGIRALIKSMESVHAGASWTIYNKRSTRMIAISFILQMGQPLFWLTINPADVNSPIVMILAGVELDVTRRLKRGFPVYADKLRLVANDPVASAEFFHATIDAVLT*LLRFGACDGDGGVLGRVKGYVGMTEEQKRLTLHCHLLVWVFGYNDFASFRDLMDKTPTRYRELAQCLDRVIFNQIATLSDINHVMRGVQHATSSGVESDDAIPPADPLVRDAKECMATPPPPSCFPRGGEPRNNLDDDTYGRVIYLDLAGVTRGASLHKCQATCRKYNHADSC------------------------------------------------------------SIEKLVGDDGLPDPLSDRFTAELRRLHSHINSFNPV 2664
RQA+R G A L FAP++K+RP+LAF+H QGRIDGHD PH+LDDI HPSVMHKCL+DFD+FMVNSIRR TSCAVCDRYCR+ KLV+V DLP K+LL+AN+SLLNCAAV+ EFFNYPGD N+LDGHV+ARQGF+ D LRVC ECLNSLLKDKMPE ALANGLWLGDFP+HLR ATFVEM+AASPVRISGMVLALDEL+VGN+ GSA+SLMRGTFTFYMQDAYGVQLRLPACDTDIAGSFTCALVGAKPSV QLRKLFGARRKMVEDLLAFQLD N LVGVH+LA+EAQLS +NLDTY +DGSIP+AI DA++PV D+TNAYANA STHAHGNREP+ DH D G TPPFIIE NAIMPSGDDLAVSSHAKPGRLRTLG L S H GRPS A+A ASL Q+AAAQAR A GQ PDGT NALV+THSG+MVSD NPGLFVGAYFDLFPHGVGGHLDKR RPLDLK+WAQI L RRD FRK+RT LYCVC+LIFRREAISNARWKL GRV R +A+ IA VTAQDLRAVA+EMETGSSGFSALADRPGIR LIK+MESVHAGASWTIYNKRSTRMIAISFI+QMGQPLFWLTINPADVNSPIVM+LAGVELDVT RLK FP YADKLR VANDPVASA+FFHATIDAVLT LLRFGACDGDGGVLGRVKGYVGMTEEQKRLTLHCHLLVWV+GYNDFASFR+LMDKTPTRY ELA+ LD+VIFNQIATLSDINHVMRGVQ S VE+D PP D L+R AKE MA PPP SCFPR G+PRNN+ DD Y ++YLDLAG+T GA+LHKCQATCRK+NH DSC SI LV D+GLPDPLSDRFTAELRRLHSHINSFNPV
Sbjct: 38 RQAKRLGHGRAARPLAFAPVVKQRPILAFNHSQGRIDGHDTPHLLDDIHHPSVMHKCLADFDTFMVNSIRR----------TSCAVCDRYCRKMHCKLVAVKDLPHKYLLVANESLLNCAAVRDEFFNYPGDHRNVLDGHVLARQGFQPDAPHHLRVCQECLNSLLKDKMPEAALANGLWLGDFPDHLRGATFVEMMAASPVRISGMVLALDELKVGNVRGSAKSLMRGTFTFYMQDAYGVQLRLPACDTDIAGSFTCALVGAKPSVGQLRKLFGARRKMVEDLLAFQLDKDNQLVGVHQLAQEAQLSAENLDTYKDDGSIPKAIFDALLPVNDSTNAYANARSTHAHGNREPDDHEDGPAPPAAADHADDGAG---------ATPPFIIETNAIMPSGDDLAVSSHAKPGRLRTLGVVLNSRHGGRPSAATAASGDASLPQMAAAQARAAAGQPPDGTQNALVLTHSGQMVSDFHNPGLFVGAYFDLFPHGVGGHLDKRTRPLDLKRWAQILLRRRDARFRKSRTFLYCVCALIFRREAISNARWKLRGRVPRDVASRIARVTAQDLRAVAAEMETGSSGFSALADRPGIRDLIKNMESVHAGASWTIYNKRSTRMIAISFIMQMGQPLFWLTINPADVNSPIVMVLAGVELDVTSRLKADFPAYADKLRFVANDPVASADFFHATIDAVLTCLLRFGACDGDGGVLGRVKGYVGMTEEQKRLTLHCHLLVWVYGYNDFASFRELMDKTPTRYFELAEYLDKVIFNQIATLSDINHVMRGVQ--PSPEVETDAPAPPPDQLMRPAKERMAVPPPSSCFPRDGQPRNNVHDDKYAHLMYLDLAGLTGGANLHKCQATCRKFNHGDSCRFGFGDKGKPLVQKTVVQRGRCVFDTDGNMTINGIVYSWSSAKDAAAAASNEAFRAAFDASIAHLVNDNGLPDPLSDRFTAELRRLHSHINSFNPV 979
BLAST of mRNA_P-littoralis_Contig1065.2.2 vs. uniprot
Match: D7G3U9_ECTSI (ATP-dependent DNA helicase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3U9_ECTSI) HSP 1 Score: 1337 bits (3459), Expect = 0.000e+0 Identity = 748/1192 (62.75%), Postives = 892/1192 (74.83%), Query Frame = 3
Query: 2664 QFAIRSNMDLKILLRDSDANWLLFYILNYSTKTEQTLDVLLPLLAPVTERIREESDGAADKELAVRLVGSCLCKQLSSLSIGGPAAASKVFDLPDDKISHATINCSMEPLLTWATSRDGPLDGEADQGDERTTGDDDGXXXXXXXXSVLITAFKGKLTVAQRAYFFYLNRCHPDDTTHPVHGMSYVVWHKLVRVERCLP-GREKPTKAASRVEPESDDSDDXXXXXXXXXXLGTSDSDDFGEDTSHPVSATSRPSSR--GRPRRDRFPVLGEFKNKWQQGRLPVMREKSAMVNIMRDFPRADTQPVAHARLLLCMFVPFFELDDLKLDGMLAQRLAADEETAKRKAEAAVMTERRDPTSTETE-GEVLVGDYQNDDDDINVMPATVQRLKTLLFVTDALRSFTKAGFSKDNSAPTSASSLLSGRTLDDAAGDVSKVVPGATASWAKVAMTRQQSSLEKMTSNHVSSLADADAEHPAPSTAQSRTRDPAPLAPYLMQIRNAAHAGLSDSARLQRCAKRDATNEAVAKTDVGASAASQYPVAFSIAQEFGLNRKQRLAFYIFANGLLAQHRPDPPEALRLYIGGGAGTGKSHVLKAMKAFIDCPAIAGQIPPGRLLTVAFQGKMASAVGGRTAHSTCSSDGARDG-SLSGDHDDQTSLNESKALAWKNVTTLAIEEVSMIGYKLLVSLHKAACSMFPLHKGKPFGNRLVVMLGDFNQLSPVKAKSLAFGAGNAANRRDMNVTERFGADLFRSANASVMLDEDNSRFSPTYAPVMERKLLGENNADDVRLLNSRLLTGSPGLHADNCFHGRVIAFRNRVNTILTVPMMRTWCMANGTPLFLAAASDVYITHLLPGFLKQKIPPGATWPAGLRDEVNSIGDASANDLPTVACLAVGAPVVVHMSPQFVLLGVCNNSDGVIHSIELDQREDYLVHSTPGYSVVNLRYPPVRVLVYIKSADEAGLWLDGLPRGVVAFAPVEKPFTVVGIGKKKFTIRRRQVPLTAGCLSSMYRSQGQTMRTITLDISNPPGNRMDPAAVYVALSRATCLDDIYLLFPVTLENLNKPRNKDVVALIEYLQRLDKATLSAFLQDPTRFTPASASLAALAEVGPRALTKKQQRKGVNRHGRGATRRTAHLLPNSDNNCFLNSSLALALAAWNAQQLLDTSALTPAGAAFIALVQLLRDSMFNGCELPQDIL 6224
QFAIRSNMDLK+LLRDSDA +LFYILNYSTKTEQTLDVLLPLL PV ERIR+E+D DKELAVRLV SCLCKQLSSL+IGGPAAASKV D+PD KISH + C M PLLTWA SRDGPLDG+ + D+ XXXXXXXX V+IT FKGKLTVAQRAY Y NRCHPDDT H +HGMSYV WHKLVRV R P +P A S SD SD +DSD PVS + R +S GRPR R+ +GE+K+KWQQ V+REK AMVNIMRD PR DTQPVAH RLLLCM++PFF LDDLK GMLAQ+LAA EETAKR+A+ A T D ++ EV + DY +D+ +V+P + +RL+T FV DALRSF AGFS D+S P SA LLSGRT D S + G + + + + RQ+SSL++ +++ +S+AD DA+ + + + T P+ PYL+++R A+ GLSD AR +R A+R ATN AVA+TDVG ++ Q+ VA SIAQEFGLNR+QRLAF+IFANGLLAQ RP+PPEALR+YIGGGAGTGKSHVLKA+KAFI+CPAIA ++P GRLLTVA+QGK A++VGG T HS CS+ G+RDG +LSGDHDDQ+SL ++KA+ WK V+ LAIEEVSM+G LLV LHKAACSMFP+HK KPFGNR+VVMLGDF+QLSPVKAKSLA GAG + RRDM VTER+GADLFRSANA VMLDE N RF+P YAP+MER L E +DDV L+N+ ++ S AD+ F RVIAFRN+VNT+LTVPMMRTWC A GT LF+AAA DVY+ H PG + P A WPAGLR E+ S+ D NDLPT ACLA+GAPVV+H SPQFVLLGVCNNSDG+I IELD RE Y ST GYSVV LRY P+R+ VYIKSAD AGL LDGL RGV+A APVE+ FT+VGI K+KFT +RRQ+PLTAGCLSS+YRSQGQTM I LDI PPG+ +D AAVYVALSRAT L D+ LLFPVTL++LN+P+N D+VA++ YL RLD+ T+ FL+DP FTPA A+L + E GPR K+ +R V RHG GATRR AHL+PN DNNCF NS+LALALAAW+ Q L DT+A TPA +F A +QLLRDSMF+ C+L +I+
Sbjct: 982 QFAIRSNMDLKVLLRDSDAKGILFYILNYSTKTEQTLDVLLPLLVPVVERIRDEADRVDDKELAVRLVRSCLCKQLSSLNIGGPAAASKVLDMPDHKISHHPVPCPMSPLLTWACSRDGPLDGDTSRPDDXXXX----XXXXXXXXDVIITPFKGKLTVAQRAYLLYRNRCHPDDTGHVLHGMSYVFWHKLVRVIRYDPLDNRQPDLAQS-----SDASD--------------TDSDCDTVQPGDPVSPSGRRASARTGRPRACRYDFVGEYKHKWQQ----VLREKPAMVNIMRDIPRKDTQPVAHCRLLLCMYIPFFTLDDLKTTGMLAQKLAAAEETAKREAQNASFTASPDKQQDNSDKAEVHLCDYGDDEPGRSVIPTSARRLQTEFFVNDALRSFLAAGFSGDDSLPESAFPLLSGRTRQQTMEDASHITLGTDVAASTLFVARQESSLQQKSTSCAASMAD-DAQPVSSPSYSTGTDGGPPVQPYLIRLRAASQEGLSDQARGERDARRVATNAAVAQTDVGRTSNLQHSVAVSIAQEFGLNRRQRLAFFIFANGLLAQSRPNPPEALRIYIGGGAGTGKSHVLKAIKAFIECPAIAAEVPRGRLLTVAYQGKQAASVGGTTVHSVCST-GSRDGGNLSGDHDDQSSLPDAKAMHWKGVSVLAIEEVSMVGCNLLVQLHKAACSMFPIHKAKPFGNRVVVMLGDFHQLSPVKAKSLACGAGVSTRRRDMTVTERYGADLFRSANACVMLDESN-RFTPIYAPIMERCLRSECISDDVDLINNHVMGTSR--KADSLFDARVIAFRNKVNTVLTVPMMRTWCKAKGTTLFIAAAHDVYVGHQRPGATAEVPPTDAPWPAGLRREIKSLDDGKTNDLPTSACLAIGAPVVLHKSPQFVLLGVCNNSDGIIRGIELDPREGY-ASSTAGYSVVTLRYAPLRIFVYIKSADAAGLHLDGLQRGVIAVAPVERKFTIVGINKRKFTFKRRQIPLTAGCLSSVYRSQGQTMPKIILDIRRPPGHAVDCAAVYVALSRATGLGDLNLLFPVTLQDLNQPQNPDIVAIVNYLHRLDETTMVLFLKDPGSFTPAYATLDGIEEAGPRPPHKQPKR--VGRHGPGATRRVAHLIPNEDNNCFFNSALALALAAWDGQPLPDTTAGTPAAGSFFAALQLLRDSMFDECDLSPNIV 2138
BLAST of mRNA_P-littoralis_Contig1065.2.2 vs. uniprot
Match: A0A6H5K8N9_9PHAE (Helitron_like_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8N9_9PHAE) HSP 1 Score: 1257 bits (3253), Expect = 0.000e+0 Identity = 656/882 (74.38%), Postives = 707/882 (80.16%), Query Frame = 1
Query: 244 TSCAVCDRYCREKDYKLVSVNDLPQKHLLLANDSLLNCAAVKHEFFNYPGDDGNILDGHVVARQGFETDG--RLRVCVECLNSLLKDKMPETALANGLWLGDFPEHLRSATFVEMVAASPVRISGMVLALDELRVGNIGGSARSLMRGTFTFYMQDAYGVQLRLPACDTDIAGSFTCALVGAKPSVAQLRKLFGARRKMVEDLLAFQLDASNDLVGVHELAREAQLSKDNLDTYNEDGSIPQAILDAMIPVKDTTNAYANAHSTHAHGNREPE----------TVDHRGDAEGGGHGPVDTATTPPFIIEANAIMPSGDDLAVSSHAKPGRLRTLGSSLKSPHRGRPSGASAT---ASLAQLAAAQAREARGQAPDGTDNALVVTHSGRMVSDVTNPGLFVGAYFDLFPHGVGGHLDKRPRPLDLKKWAQIFLWRRDPGFRKNRTSLYCVCSLIFRREAISNARWKLSGRVSRGMAADIASVTAQDLRAVASEMETGSSGFSALADRPGIRALIKSMESVHAGASWTIYNKRSTRMIAISFILQMGQPLFWLTINPADVNSPIVMILAGVELDVTRRLKRGFPVYADKLRLVANDPVASAEFFHATIDAVLT*LLRFGACDGDGGVLGRVKGYVGMTEEQKRLTLHCHLLVWVFGYNDFASFRDLMDKTPTRYRELAQCLDRVIFNQIATLSDINHVMRGVQHATSSGVESDDAIPPADPLVRDAKECMATPPPPSCFPRGGEPRNNLDDDTYGRVIYLDLAGVTRGASLHKCQATCRKYNHADSC------------------------------------------------------------SIEKLVGDDGLPDPLSDRFTAELRRLHSHINSFNPV 2664
TSCAVCDRYCR+ KLV+V DLP K+LL+AN+SLLNCAAV+ EFFNYPGD N+LDGHV+ARQGF+ D LRVC ECLNSLLKDKMPE ALANGLWLGDFP+HLR ATFVEM+AASPVRISGMVLALDEL+VGN+ GSA+SLMRGTFTFYMQDAYGVQLRLPACDTDIAGSFTCALVGAKPSV QLRKLFGARRKMVEDLLAFQLD N LVGVH+LA+EAQLS +NLDTY +DGSIP+AI DA++PV D+TNAYANA STHAHGNREP+ DH D G TPPFIIE NAIMPSGDDLAVSSHAKPGRLRTLG L S H GRPS A+A ASL Q+AAAQAR A GQ PDGT NALV+THSG+MVSD NPGLFVGAYFDLFPHGVGGHLDKR RPLDLK+WAQI L RRD FRK+RT LYCVC+LIFRREAISNARWKL GRV R +A+ IA VTAQDLRAVA+EMETGSSGFSALADRPGIR LIK+ME VHAGASWTIYNKRSTRMIAISFI+QMGQPLFWLTINPADVNSPIVM+LAGVELDVT RLK FP YADKLR VANDPVASA+FFHATIDAVLT LLRFGACDGDGGVLGRVKGYVGMTEEQKRLTLHCHLLVWV+GYNDFASFR+LMDKTPTRY ELA+ LD+VIFNQIATLSDINHVMRGVQ S VE+D PP D L+R AKE MA PPP SCFPR G+PRNN+ DD Y ++YLDLAG+T GA+LHKCQATCRK+NH DSC SI LV D+GLPDPLSDRFTAELRRLHSHINSFNPV
Sbjct: 29 TSCAVCDRYCRKMHCKLVAVKDLPHKYLLVANESLLNCAAVRDEFFNYPGDHRNVLDGHVLARQGFQPDAPHHLRVCQECLNSLLKDKMPEAALANGLWLGDFPDHLRGATFVEMMAASPVRISGMVLALDELKVGNVRGSAKSLMRGTFTFYMQDAYGVQLRLPACDTDIAGSFTCALVGAKPSVGQLRKLFGARRKMVEDLLAFQLDKDNQLVGVHQLAQEAQLSAENLDTYKDDGSIPKAIFDALLPVNDSTNAYANARSTHAHGNREPDDHEDGPAPPAAADHADDGAG---------ATPPFIIETNAIMPSGDDLAVSSHAKPGRLRTLGVVLNSRHGGRPSAATAASGDASLPQMAAAQARAAAGQPPDGTQNALVLTHSGQMVSDFHNPGLFVGAYFDLFPHGVGGHLDKRTRPLDLKRWAQILLRRRDARFRKSRTFLYCVCALIFRREAISNARWKLRGRVPRDVASRIAGVTAQDLRAVAAEMETGSSGFSALADRPGIRDLIKNMEFVHAGASWTIYNKRSTRMIAISFIMQMGQPLFWLTINPADVNSPIVMVLAGVELDVTSRLKADFPAYADKLRFVANDPVASADFFHATIDAVLTCLLRFGACDGDGGVLGRVKGYVGMTEEQKRLTLHCHLLVWVYGYNDFASFRELMDKTPTRYFELAEYLDKVIFNQIATLSDINHVMRGVQ--PSPEVETDVPAPPPDQLMRPAKERMAVPPPSSCFPRDGQPRNNVHDDKYAHLMYLDLAGLTGGANLHKCQATCRKFNHGDSCRFGFGDKGKPLVQKTVVQRGRCVFDTDGNMTINGIVYSWSSAKDAAAAASNEAFRAAFDASIAHLVNDNGLPDPLSDRFTAELRRLHSHINSFNPV 899
BLAST of mRNA_P-littoralis_Contig1065.2.2 vs. uniprot
Match: A0A6H5KIB1_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIB1_9PHAE) HSP 1 Score: 1062 bits (2746), Expect = 0.000e+0 Identity = 637/1338 (47.61%), Postives = 797/1338 (59.57%), Query Frame = 3
Query: 2667 FAIRSNMDLKILLRDSDANWLLFYILNYSTKTEQTLDVLLPLLAPVTERIREESDGAADKELAVRLVGSCLCKQLSSLSIGGPAAASKVFDLPDDKISHATINCSMEPLLTWATSRDGPLDGEADQGDERTTG-------DDDGXXXXXXXXSVLITAFKGKLTVAQRAYFFYLNRCHPDDTTHPVHGMSYVVWHKLVRVERC--LPGREKPTKAASRVEPESDDSDDXXXXXXXXXXLGTSDSDDFGEDTSHPVSATSRPSS-----RGRPRRDRFPVLGEFKNKWQQG--------------------RLPVMREKSAMVNIMRDFPRADTQPVAH---------------------------------------------ARLLLCMFVPFFELDDLK-----------------------------LDGMLAQRLAADEETAKRKAEAAVMTERRDPTSTETEGEVLVGDYQNDDDD-INVMPATVQRLKTLLFVTDALRSFTKAGFSKDNSAPTSASSLLSGRTLDDAAGDVSKVVPGATASWAKVAMTRQQSSLEKM------------------------------------------TSNHVSSLADADAEHPAPSTAQS-RTRDPAPLAPYLMQIRNAAHAGLSDSARLQRCAKRDATNEAVAKTDVGASAASQYPVAFSIAQEFGLNRKQRLAFYIFANGLLAQHRPDPPEALRLYIGGGAGTGKSHVLKAMKAFIDCPAIAGQIPPGRLLTVAFQGKMASAVGGRTAHSTCSSDGARDGSLSGDHDDQTSLNESKALAWKNVTTLAIEEVSMIGYKLLVSLHKAACSMFPLHKGKPFGNRLVVMLGDFNQLSPVKAKSLAFGAGNAANRRDMNVTERFGADLFRSANASVMLDEDNSRFSPTYAPVMERKLLGENNADDVRLLNSRLLTGSPGLHADNCFHGRVIAFRNRVNTILTVPMMRTWCMANGTPLFLAAASDVYITHLLPGFLKQKIPPGATWPAGLRDEVNSIGDASANDLPTVACLAVGAPVVVHMSPQFVLLGVCNNSDGVIHSIELDQREDYLVHSTPGYSVVNLRYPPVRVLVYIKSADEAGLWLDGLPRGVVAFAPVEKPFTVVGIGKKKFTIRRRQVPLTAGCLSSMYRSQGQTMRTITLDISNPPGNRMDPAAVYVALSRATCLDDIYLLFPVTLENLNKPRNKDVVALIEYLQRLDKATLSAFLQDPTRFTPASASLAALAEVGPRALTKKQQRKGVNRHGRGATRRTAHLLPNSDNNCFLNSSLALALAAWNAQQLLDTSALTPAGAAFIALVQLLRDSMFNGCELPQDIL 6224
FA+RSNMD+K+LL+ SDA LL+YILNY+TKTEQTLDVLLPLL PV ERIR +S A +KE+AVRLV SCLCKQLSSL IGGPAAASKV L D+K+SH+ + C M PLLTWA+ RD P D + GD+ DD G V+IT F+GKLTVAQR + Y +RC PDDT HP+H SY W + VR+E+C L GR + + ++R + DD DD L DD PVS + R +S RGRPR R+ ++GE++NKW+QG R ++REK A+ NI++D P +DTQPVAH ARLL+CMFVPFF LDDLK ++GMLAQ+LAA EETAKR+AE +++E+ D G+VL+ Y +D+ +V+PATV+R+ T LFV DA R+F AGF+ D S+P +S LLSGR+++DA D+S V G A ++RQ++ LE + +S+ S+LA +D+ ++ S P+ PY++++R A+ GLS A R +RD TN VA TD+GA AA Q+ AFSIAQEFGLNRKQR AFYIFANGLLAQ RPDPP ALRLYIGGGAGTGK+HVL+A++AF+D P + +P RLL VAFQGK A+AVGG T HS C + DG LSG H+ Q++L SKA WK LAIEE+SMI LLV LH ACSMFPLHKG+PFGNR+VVMLGDFNQL P+KA+SLA G R M VTER+G+DLFR ANA VML E N RFSP+YAPVMER L + DDV+LLN+ ++ S +A + F ++ FRN+V+TILT PMMR C A GTPLF+A A DVY+ H PG+ ++K A WP GLR+E+NS+ DA DLPT+A LAVGAPVVVH PQFVLLGVCNNSDG+I IELD RED+L+ TPGYSVVNLRY P+RV VYIK+AD+AGL L+GL RGVVA APVEK FT+ GIGK+KF +RRQ+P D++ +I YL RL K TL F QD + FTPASASL A + GP + +++Q+R+ RHG GA RR AHL+ NS+NNCF NS+LAL LAAW+ QQL +SA TPA +F + +QLLRD MFNG LP I+
Sbjct: 1064 FAVRSNMDIKVLLKGSDAKGLLYYILNYATKTEQTLDVLLPLLIPVVERIRADSGDAPEKEMAVRLVRSCLCKQLSSLPIGGPAAASKVLGLSDEKLSHSPVPCPMTPLLTWASKRDKPADADNSPGDDXXXXXXXXXXXDDSG---------VIITPFQGKLTVAQRTHLLYRSRCRPDDTEHPLHQKSYFAWCREVRIEKCPTLHGRPRGKQPSARGN-DDDDVDDVDDGHPGDECLD----DD-------PVSPSGRTASTRAPRRGRPRATRYELVGEYQNKWEQGALHPYVRTRLYPLCTCLTFARTHIVREKPAISNIIKDVPTSDTQPVAHGFSSFPLFPCLSSARRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXARLLICMFVPFFTLDDLKRADETWPDALRRADDDNRWDPGTYPFRLNIEGMLAQKLAAAEETAKRRAERQLLSEKPDTLGDNVAGDVLLDSYGGEDEPGESVIPATVRRMLTDLFVDDAFRTFVAAGFNGDGSSPDGSSPLLSGRSMEDACRDISFVCGGTDLEAATAFISRQENELENIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSSSSASALAGSDSHTTTAGSSNSIGVPKEDPIEPYIIELRKASQDGLSPEACRARDERRDRTNAEVADTDIGAVAALQHVAAFSIAQEFGLNRKQRQAFYIFANGLLAQCRPDPPPALRLYIGGGAGTGKTHVLRAIRAFVDSPPVKRLLPRARLLCVAFQGKQAAAVGGTTVHSVCPNTDDSDGCLSGAHEGQSTLPASKAAHWKGDVVLAIEEISMISCNLLVRLHNTACSMFPLHKGQPFGNRVVVMLGDFNQLRPIKARSLAHGTALQERRLGMTVTERYGSDLFRMANACVMLHESN-RFSPSYAPVMERCLYSKCTEDDVKLLNTCVMGASTTRNATSAFDAIIVTFRNKVSTILTAPMMRALCQARGTPLFVARAHDVYVKHQRPGYAEEKPATNAPWPTGLREEINSLDDAKTKDLPTLAFLAVGAPVVVHKKPQFVLLGVCNNSDGIIRGIELDPREDFLLDPTPGYSVVNLRYAPLRVFVYIKTADDAGLHLEGLDRGVVAIAPVEKEFTIEGIGKRKFIFKRRQLP-------------------------------------------------------------------DILGIINYLHRLGKETLKLFPQDASTFTPASASLDAATDEGPTS-SRRQRRRTTGRHGPGAARRVAHLIANSNNNCFFNSALALGLAAWDGQQLPPSSAGTPAAGSFFSALQLLRDCMFNGSTLPDHIV 2311
BLAST of mRNA_P-littoralis_Contig1065.2.2 vs. uniprot
Match: A0A6H5JN07_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN07_9PHAE) HSP 1 Score: 799 bits (2064), Expect = 1.390e-245 Identity = 522/1226 (42.58%), Postives = 693/1226 (56.53%), Query Frame = 3
Query: 2664 QFAIRSNMDLKILLRDSDANWLLFYILNYSTKTEQTLDVLLPLLAPVTERIREESDGAADKELAVRLVGSCLCKQLSSLSIGGPAAASKVFDLPDDKISHATINCSMEPLLTWATSRDGPLDGEADQGDERTTGDDDGXXXXXXXXSVLITAFKGKLTVAQRAYFFYLNRCHPDDTTHPVHGMSYVVWHKLVRVERCLPGREKPTKAASRVEPESDDSDDXXXXXXXXXXLGTSDSDDFGEDTSHPVSATSRPSSRGRPRRDRFPVLGEFKNKWQQGRLPVMREKSAMVNIMRDFPRADTQPVAHARLLLCMFVPFFELDDLKLDG----MLAQRLAADEETAKRKAEA---AVMTERRDPTSTETEGEVLVGDYQNDDDD-INVMPATVQRLKTLLFVTDALRSFTKAGFSKDNSAPTSASSLLSGRTLDDAAGDVSKVVPGATASWAKVA----MTRQQSSLEKMTSNHVSSLADADAEHPAPS-TAQSRTRDPAPLAPYLMQIRNAAHAGLSDSARLQRCAKRDATNEAVAKTDVGASAASQYPVAFSIAQEFGLNRKQRLAFYIFANGLLAQHRPDPPEALRLYIGGGAGTGKSHVLKAMKAFIDCPAIAGQIPPGRLLTVAFQGKMASAVGGRTAHSTCSSDGARD--GSLSGDHDDQTSLNESKALAWKNVTTLAIEEVSMIGYKLLVSLHKAACSMFPLHKGKPFGNRL------VVMLGDFNQLSPVKAKSLAFGAGNAANRRDMNVTERFGADLFRSANASVMLDEDNSRFSPTYAPVMERKLLGENNADDVRLLNSRLLTGSPGLHADNCFHGRVIAFRNRVNTILTVPMMRTWCMANGTPLFLAAASDVYITHLLPGFLKQKIPPGATWPAGLRDEVNSIGDASANDLPTVACLAVGAPVVVHMSPQFVLLGVCNNSDGVIHSIELDQREDYLVHSTPGYSVVNLRYPPVRVLVYIKSADEAGLWLDGLPRGVVAFAPVEKPFTVVGIG-KKKFTIRRRQVPLTAGCLSSM-------------YRSQGQTMRTITLDISNPPGNRMDPAAVYVALSRATCLDDIYLLFPVTLENLNKPRNKDVVALIEYLQRLDKATLSAFLQDPTRFTPASASLAALAE-VGPRALTKKQQRKGVNRHGR---GATRRTAHLLPNSDNNCFLNSSLALALAAWNAQQLLDTSALTPAGAAFIALVQLLRDSMFNGCELPQDIL 6224
QF IRSNMDLK+LL D DA ++FYILNY+TKT ES G KE+ VRLV SCLCKQL+SLS GGPAAASKVFDL D KIS T C M L+ AF GKLT QR++ Y NRC DT HP+H +SYVVWH+ VRVER PG + +R + ++D SDD D P P RGR D + +G+++ KW Q V+R K+ MVNIMRD PRADTQ H RLLLCMF+PFF+L +LK QR+ + K++A A M+ D E ++ + +Y +DD+D +V+P T L+T + V AL P + SGR+ +D D++K+ SW+ + M +Q+ LE MT + V+SLA++ + T S DP L PYL+++R+A+ A EFGLNRKQRLAF++F+NG+LA+ ++LRLYIGGGA +GKSHVLKAMKAFI+CPA+ GQI R+L VAF+G+ A+AVGG T HS C G + GSLS +HDDQ+ + +++A+ WK V LA+EEVSM+G +LLV+L+KAACSMFP+HK KPFGN +V+ G FNQLS + + ++M+ ++GADLFR NA V+LD+ ++RFSPTYAP+M+R LL +D+RL ++R+L GSPGLHA +C+ GRV NT+LTVPMMRTWC AN TPLF+A A D ++ PG LRDE++S+ DA NDLPT+ACLA+GAPVV+H PQFV+LGVCNNSDG+I IE+ QRE+ V VYI++A +AGL L L RGV + PVE+ F++V K+KFT R+QVPLTAGCLS++ S ++R I LD+ PP +DPA+ Y+ALSRAT L+D+YLLFPVTLE+L++PRNKDVVALIE+L RL++ T D + FT SASL++ + + T + +G +R GR +T A L+ N +NN FLNS++AL LAA++ D TPAGAAF ++L++D+MFNG L QD L
Sbjct: 995 QFVIRSNMDLKVLLEDIDAKGIMFYILNYATKTAN------------------ESQGETSKEMVVRLVRSCLCKQLASLSFGGPAAASKVFDLSDAKISLYTSPCPMGSLI----------------------------------------AFGGKLTAKQRSHLRYRNRCDRTDTEHPLHCVSYVVWHRPVRVERYTPGA---SNCVNRSDTDNDSSDD---------------------DMDEPQHT---PQRRGRASSDPYDCVGKYRKKWIQ----VVRRKAVMVNIMRDIPRADTQQEDHCRLLLCMFLPFFDLSNLKNSDESWESAMQRVEDSDSWDKQRANKENDAPMSHSLDDAGHGAENDIFLIEYGDDDNDSASVIPETAIGLRTKIVVDTAL--------------PVRSWHPRSGRSTEDVETDLTKIT-----SWSGSSDPTYMAQQEKCLEAMTESEVASLAESTSXXXXXXXTTDSHEYDPKVLDPYLLELRSASQA------------------------------------------EFGLNRKQRLAFFVFSNGMLAKKVSPGSDSLRLYIGGGAKSGKSHVLKAMKAFIECPALVGQIEDSRMLAVAFRGQQAAAVGGTTIHSVCQV-GRKTFRGSLSRNHDDQSPMKDTQAIHWKGVNMLAVEEVSMVGCELLVALNKAACSMFPMHKDKPFGNLQPFGNLPLVLCGGFNQLS----NFTCYWSWQLEKEKNMSSLVKYGADLFRMVNACVVLDQGSNRFSPTYAPLMDRLLLSSPTYNDIRLFDTRVLNGSPGLHAFDCYDGRV-------NTVLTVPMMRTWCKANITPLFIAPAMDSFVGDERPG---------------LRDEISSLDDAKTNDLPTLACLAIGAPVVLHKQPQFVILGVCNNSDGIIRGIEITQREE--------------------VFVYIQTAYDAGLKLPDLCRGVTSVGPVERNFSIVITKTKRKFTFSRKQVPLTAGCLSALGSDYIASSCLYHPILSHCVSLRRIILDLQKPPQPLVDPASSYLALSRATYLEDLYLLFPVTLEDLSRPRNKDVVALIEFLHRLEETTSLLSHPDRSTFTLTSASLSSDGDAIDGEDNTSTGRTRGGSRPGRHLPASTPSIARLIANKNNNYFLNSAMALTLAAFDGLSPPDGRDCTPAGAAFFPAIKLIQDTMFNGESLQQDTL 2023
BLAST of mRNA_P-littoralis_Contig1065.2.2 vs. uniprot
Match: A0A6H5KTA2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTA2_9PHAE) HSP 1 Score: 810 bits (2093), Expect = 2.500e-241 Identity = 441/875 (50.40%), Postives = 565/875 (64.57%), Query Frame = 1
Query: 49 FAPIIKERPVLAFDHGQGRIDGHDKPHMLDDILHPSVMHKCLSDFDSFMVNSIRRCESNARCTLSTSCAVCDRYCREKDYKLVSVNDLPQKHLLLANDSLLNCAAVKHEFFNYPGDDGNILDGHVVARQGFETDG--RLRVCVECLNSLLKDKMPETALANGLWLGDFPEHLRSATFVEMVAASPVRISGMVLALDELRVGNIGGSARSLMRGTFTFYMQDAYGVQLRLPACDTDIAGSFTCALVGAKPSVAQLRKLFGARRKMVEDLLAFQLDASNDLVGVHELAREAQLSKDNLDTYNEDGSIPQAILDAMIPVKDTTNAYANAHSTHAHGNREPET-VDHRGDAEGGGHGPVDTATTPPFIIEANAIMPSGDDLAVSSHAKPGRLRTLGSSLKSPHRGRPSGASATASLAQLAAAQAREARGQAP-----------------------DGTDNALVVTHSGRMVSDVTNPGLFVGAYFDLFPHGVGGHLDKRPRPLDLKKWAQIFLWRRDPGFRKNRTSLYCVCSLIFRREAISNARWKLSGRVSRGMAADIASVTAQDLRAVASEMETGSSGFSALADRPGIRALIKSMESVHAGASWTIYNKRSTRMIAISFILQMGQPLFWLTINPADVNSPIVMILAGVELDVTRRLKRGFPVYADKLRLVANDPVASAEFFHATIDAVLT*LLRFGACDGDGGVLGRVKGYVGMTEEQKRLTLHCHLLVWVFGYNDFASFRDLMDKTPTRYRELAQCLDRVIFNQIATLSDINHVMRGVQHATSSGVESDDAIPPA-DPLVRDAKECMATPPPPSCFPRGGEPRNNLDDDTYGRVIYLDLAGVTRGASLHKCQATCRKYNHADSCSIEKLVGDDGLP 2592
+AP + E PV AF+H +GR DGHD+P + D+L S++ KC++DF ++M ++I S SCAVCD CR D + VS N+LP + LL A L ++ ++ +YPGD LDG V+AR+GFE+ RLRVC ECL L +K P LANGLW+GDFPEHL+ +T+VEM AASPVR SGMV AL++L+VG I GSA +MRGTFTF+ Q+AYGV+ LP CDTDIAGS TCALVGA+P+ AQLRKL GARR +++L+ FQ D N L G H L + AQ S +NLDT+ +DGS+P ILD++IP D + A S++ NR+PET VD +A G + P FII+ A++PSG + AVSS ++P RLRTL + L + A A A +A G P + T N LV+ H+G+MV D PG+ + AYFDLFPHGVGGHLDKR RPL+ KWA+ L RRDP FRKNRT ++C+ ++IFRREAISNA WKL+GRVSRG+A ++ +T DL AVA E+E G+S ALA+RP R LI++M+SV+ ASWT++NKR+ RM AIS I+Q+GQPLFW+TINPAD NSP+VM LAGV+LDV+ RLK P Y +L+L+A DPVASAEFFH IDAV+ LLRFGA DGDGGVLGRVK YVGMTEEQ+RLTLHCHLLVWV Y+ELA L R IF+Q+A+ D+ H M G S D PP+ DPL R A E +A PPP +CFP G R+ D+ Y + +LA +T+ A++H+C TC K+ HA+SC G DG P
Sbjct: 2172 YAPTVTETPVTAFNHPEGRSDGHDRPALTKDVLGTSMLFKCIADFHTYMADNIH----------SVSCAVCDLMCRRIDCEWVSANELPNRSLLTAGPHLKAHDSIMNDMKDYPGDTNKCLDGLVLAREGFESGPLHRLRVCSECLRDLNSNKTPYATLANGLWVGDFPEHLKDSTWVEMAAASPVRTSGMVFALEQLKVGAIPGSAHRMMRGTFTFFFQNAYGVEKVLPTCDTDIAGSMTCALVGARPTEAQLRKLLGARRSRIQELMDFQRDEQNQLAGEHVLFKRAQTSVENLDTFPQDGSVPPRILDSLIPAVDASRLREKASSSYVRDNRQPETPVDDADEAVDG----QNADDNPAFIIDNCAVIPSGREQAVSSESRPERLRTLQTDLINS-------AGTAAPTAMDVEEDDAQAAGSTPSXXXXXXXXXXXXXXXXXXXXXXEQTKNMLVLPHTGKMVEDFNEPGVMIAAYFDLFPHGVGGHLDKRQRPLNFTKWARCLLRRRDPRFRKNRTFVFCLAAIIFRREAISNAHWKLTGRVSRGVAQELDGITPDDLLAVAREIEGGTSTAKALANRPAARQLIRTMQSVNGDASWTMFNKRTLRMKAISMIIQLGQPLFWMTINPADSNSPVVMKLAGVDLDVSSRLKTDLPQYVKRLQLIAADPVASAEFFHVMIDAVMKTLLRFGAKDGDGGVLGRVKAYVGMTEEQRRLTLHCHLLVWV-------------------YQELASFLSRTIFSQVASDEDVQHAMTG--GIEPSNAPEDGTPPPSRDPLKRPATETIAMPPPSACFPPPGVERDVAADEQYLGPLRAELAEITKAANMHQCTYTCHKHGHANSCRFG--FGKDGKP 3002
BLAST of mRNA_P-littoralis_Contig1065.2.2 vs. uniprot
Match: A0A6H5K882_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K882_9PHAE) HSP 1 Score: 747 bits (1928), Expect = 4.930e-231 Identity = 503/1233 (40.79%), Postives = 651/1233 (52.80%), Query Frame = 3
Query: 2667 FAIRSNMDLKILLRDSDANWLLFYILNYSTKTEQTLDVLLPLLAPVTERIREESDGAADKELAVRLVGSCLCKQLSSLSIGGPAAASKVFDLPDDKISHATINCSMEPLLTWATSRDGPLDGEADQGDERTTGDDDGXXXXXXXXS---VLITAFKGKLTVAQRAYFFYLNRCHPDDTTHPVHGMSYVVWHKLVRVERCLPGREKPTKAASRVEPESDDSDDXXXXXXXXXXLGTSDSDDFGEDTSHPVSATSRPSSRGRPRRDRFPVLGEFKNKWQQGRLPVMREKSAMVNIMRDFPRADTQPVAHARLLLCMFVPFFELDDLK-----------------------------LDGMLAQRLAADEETAKRKAEAAVMTERRDP---TSTETEGEVLVGDYQ-NDDDDINVMPATVQRLKTLLFVTDALRSFTKAGFSKDNSAPTSASSLLSGRTLDDAAGDVSKVVPGATASWAKVAMTRQQSSLEKMTSNHVSSLADADAEHPAPSTAQSRTRDPAP-LAPYLMQIRNAAHAGLSDSARLQRCAKRDATNEAVAKTDVGASAASQYPVAFSIAQEFGLNRKQRLAFYIFANGLLAQHR-PDPPEALRLYIGGGAGTGKSHVLKAMKAFIDCPAIAGQIPPGRLLTVAFQGKMASAVGGRTAHSTCSSDGARDGSLSGDHDDQTSLNESKALAWKNVTTLAIEEVSMIGYKLLVSLHKAACSMFPLHKGKPFGNRLVVMLGDFNQLSPVKAKSLAFGAGNAANRRDMNVTERFGADLFRSANASVMLDEDNSRFSPTYAPVMERKLLGENNADDVRLLNSRLLTGSPGLHADNCFHGRVIAFRNRVNTILTVPMMRTWCMANGTPLFLAAASDVYITHLLPGFLKQKIPPGATWPAGLRDEVNSIGDASANDLPTVACLAVGAPVVVHMSPQFVLLGVCNNSDGVIHSIELDQREDYLVHSTPGYSVVNLRYPPVRVLVYIKSADEAGLWLDGLPRGVVAFAPVEKPFTVVGIGKKKFTIRRRQVPLTAGCLSSMYRSQGQTMRTITLDISNPPGNRMDPAAVYVALSRATCLDDIYLLFPVTLENLNKPRNKDVVALIEYLQRLDKATLSAFLQDPTRFTPASASLAALAEVGPRALTKKQQRKGVNRHGRG------ATRRT----AHLLPNSDNNCFLNSSLALALAAWNAQQLLDTSALTPAGAAFIALVQLLRDSMFNGCELPQDI 6221
F IRSNMDL ++LRDSDA LL+Y+L+YSTK+EQTLDVLLPLL PV +RIR+ ++G KE AVRLV SCLCKQL+SL+IGGPAAASKVF LPD KISH T+ C M PLL WA+SRD P D E D GD T+GD XXXXXX V+++ G+LTV Q A+ YL+RC P+DT H +HGMSYV W +LVR ER P FK + R VMR+ MVNIMRD PR+DT+P AH RLLLC+FV FEL+DLK + GML QR+AADEE A R+ E A ++ ++ E E+++ D +DDDD +V T Q + FV DA +F AG ++S Q+ TRD P + NA +RD N+ VA+TD+GA+A SQ+PVAF IAQEFGLNR+QRLAFYIFANG+ A+ R P P I G +L VAFQGK A++VGG T HS C+ G R GS DHDDQ L E +AL+W+ + LA++E SM+G ++ ++L KAAC +FP+HK KPFGN + V GDFNQL + ++S TY+ DV N+R+L G+PGL A +C+ G+VI RN+V T LT+P MRTWC + GT LF+++A+D ++ G K+ GA WP LR+EVNS+ D DLP CLAVG P+VVH SPQ VLLGVC+N DG++ +IELDQRE H GY VV+L++ PVRV V+I+S D++GL L G PRGVVAF P+E+ + G + FTI+RRQ+PLT+GCLSS+ + LD+ PPG R+DPA++YVA SRA L+D YLLFPVTL +L++PR+ DVVALI+ L+RL K TL+AF DP+ F P++ SL T G N GRG A+RR AHL+PNS NNCF NS++AL LA ++ + S TPA AF ++L++D+M +G +P+ I
Sbjct: 653 FLIRSNMDLNVMLRDSDARGLLYYVLHYSTKSEQTLDVLLPLLLPVVQRIRDHNEGEPAKETAVRLVRSCLCKQLTSLNIGGPAAASKVFGLPDAKISHTTVPCPMGPLLAWASSRDTP-DEEPDDGDS-TSGDXXXXXXXXXSDDQHGVVVSVVGGRLTVNQWAHVLYLHRCSPEDTEHALHGMSYVSWTRLVRTERYTP----------------------------------------------------------------------FKKAYNC-RQRVMRQGPVMVNIMRDIPRSDTKPEAHCRLLLCIFVALFELEDLKRVGDSWTTAMANVEQHDRWDKRTKPFRLNIAGMLRQRIAADEERAYREEEEAFVSGSSGQGMEMGSDGEDEIILNDLGGDDDDDQSVFLVTKQGILMQAFVHDAHDAFVSAGLRGNDS--------------------------------------------------------------------QAATRDVMCWFVPVECKSINA---------------RRDRNNQEVARTDIGAAAPSQHPVAFRIAQEFGLNREQRLAFYIFANGIFAKKRSPHSP----------------------------------IEEGGMLAVAFQGKQAASVGGTTIHSVCNVPG-RKGSGGKDHDDQKGLTEDQALSWEGKSVLAVKEASMVGCEMELALDKAACKVFPMHKDKPFGNMVAVFCGDFNQLRFLHSRS-------------------------------------------TYS--------------DVIKFNTRVLNGTPGLSAADCYDGKVITLRNKVTTALTMPTMRTWCQSRGTTLFISSATDEFVGDEGGGRPKETPQAGAAWPPCLRNEVNSLDDTKTKDLPRQLCLAVGVPIVVHKSPQHVLLGVCSNRDGIVRAIELDQREQIQNHDG-GYRVVHLKHLPVRVFVHIESMDDSGLKLPGFPRGVVAFGPIERNVVLTGKNGRNFTIKRRQLPLTSGCLSSVR---------VILDLRKPPGPRVDPASLYVARSRAKSLNDTYLLFPVTLNDLSRPRDADVVALIDCLRRLAKDTLNAFTSDPSTFIPSATSLP----------TDSDYDSGENDGGRGSGWLGGASRRRQLQPAHLMPNSANNCFFNSAIALCLAVFDGHTPPNFSDCTPAATAFCPAIRLVKDNMLSGAPMPEHI 1617
BLAST of mRNA_P-littoralis_Contig1065.2.2 vs. uniprot
Match: A0A6H5KXW4_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXW4_9PHAE) HSP 1 Score: 707 bits (1825), Expect = 6.650e-227 Identity = 411/768 (53.52%), Postives = 504/768 (65.62%), Query Frame = 3
Query: 3525 MVNIMRDFPRADTQPVAHARLLLCMFVPFFELDDLK-----------------------------LDGMLAQRLAADEETAKRKAEAAVMTERRDPTSTETEGEVLVGDYQNDDDD-INVMPATVQRLKTLLFVTDALRSFTKAGFSKDNSAPTSASSLLSGRTLDDAAGDVSKVVPGATASWAKVAMTRQQSSLEKMTSNHVSSLADADAEH-PAPSTAQSRTRDPAPLAPYLMQIRNAAHAGLSDSARLQRCAKRDATNEAVAKTDVGASAASQYPVAFSIAQEFGLNRKQRLAFYIFANGLLAQHRPDPPEALRLYIGGGAGTGKSHVLKAMKAFIDCPAIAGQIPPGRLLTVAFQGKMASAVGGRTAHSTCSSDGARDGSLSGDHDDQTSLNESKALAWKNVTTLAIEEVSMIGYKLLVSLHKAACSMFPLHKGK-PFGNRLVVMLGDFNQLSPVKAKSLAFGAGNAANRRDMNVTERFGADLFRSANASVMLDEDNSRFSPTYAPVMERKLLGENNADDVRLLNSRLLTGSPGLHADNCFHGRVIAFRNRVNTILTVPMMRTWCMANGTPLFLAAASDVYITHLLPGFLKQKIPPGATWPAGLRDEVNSIGDASANDLPTVACLAVGAPVVVHMSPQFVLLGVCNNSDGVIHSIELDQREDYLVHSTPGYSVVNLRYPPVRVLVYIKSADEAGLWLDGLPRGVVAFAPVEKPFTVVGIGKKKFTIRRRQVPLTAGCLSSMYRSQGQTMRTITLDISNPPGNRM 5732
M NIM+D PR+DTQPVAHARLL+C+FVPFF LDDLK + GMLAQ+LAA EETAKR AE +++E+ G+VL+ Y +D+ +V+PATV+R+ T LFV DA R+F AGF+ D S ++S LLSGR+++D D+S V G A +M+RQ++ +D+ PA S++ + PL P +M++R A+ GLS A R +RD TN VA TD+GA AA Q+ AF+IAQEFGLNRKQR AFYIFANGLL+Q RPDPP ALRLYIGGGAGTGK+HVL+A++AF+D P + +P RLL VAFQGK A+AVGG T HS C + G G LSG H+ Q++L S+A W+ LAIEE SMI LLV LH ACSMFPLHKG+ PFGNR+VVMLGDFNQL P+KA+SLA R M VTER+G+DLFR ANA VMLDE N RFSPTYAPVMER L + DDVRLLN+ ++ S +A + F +I FRN+ + T RT A S + HL F QK A WP GLR+E+NS+ DA+ DLPT+A LAVGAPVVVH PQFVLLGVCNNSDG+I IELD ED+L+ TPGYSVVNLRY P++V VYIK+AD+AGL L+GL RGVVA APVEK T+ GIGK KF +RRQ+PL AGC+SS++RSQGQTM I LDI PPG M
Sbjct: 1 MANIMKDVPRSDTQPVAHARLLICLFVPFFTLDDLKRADETWPDALRRADDKNRWDPGTYPFRLNIQGMLAQKLAAAEETAKRHAERQLLSEKTHALGDNMAGDVLLDSYGGEDEPGESVIPATVRRMLTDLFVNDAFRTFVAAGFNGDGSTRDASSPLLSGRSMEDTCLDISFVRGGTDLEAATASMSRQENXXXXXXXXXXXXXXGSDSNRTPAASSSSFGVPNEDPLGPCIMELRKASQDGLSPEACRARDERRDRTNAEVAGTDIGAVAALQHVAAFTIAQEFGLNRKQRQAFYIFANGLLSQFRPDPPPALRLYIGGGAGTGKTHVLRAIRAFVDSPPVKRLLPRARLLCVAFQGKQAAAVGGTTVHSVCPNTGDSYGCLSGAHEGQSTLPASEAAHWQRDVILAIEESSMISCNLLVRLHNTACSMFPLHKGQQPFGNRVVVMLGDFNQLRPIKARSLAHLTALQERRLGMTVTERYGSDLFRMANACVMLDESN-RFSPTYAPVMERCLYSKCTEDDVRLLNTCVMGASTTRNATSAFDASIITFRNKEYALAT----RT-----------NAPSPIPFLHL---FFPQKPATNAPWPTGLREEINSLDDANTKDLPTLAFLAVGAPVVVHKRPQFVLLGVCNNSDGIIRGIELDPLEDFLLDPTPGYSVVNLRYAPLQVFVYIKTADDAGLHLEGLDRGVVAIAPVEKECTIEGIGKGKFIFKRRQLPLPAGCVSSVFRSQGQTMPKIILDIHPPPGTAM 749
BLAST of mRNA_P-littoralis_Contig1065.2.2 vs. uniprot
Match: D7G2I1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2I1_ECTSI) HSP 1 Score: 532 bits (1371), Expect = 2.860e-167 Identity = 278/437 (63.62%), Postives = 332/437 (75.97%), Query Frame = 3
Query: 4914 MLDEDNSRFSPTYAPVMERKLLGENNADDVRLLNSRLLTGSPGLHADNCFHGRVIAFRNRVNTILTVPMMRTWCMANGTPLFLAAASDVYITHLLPGFLKQKIPPGATWPAGLRDEVNSIGDASANDLPTVACLAVGAPVVVHMSPQFVLLGVCNNSDGVIHSIELDQREDYLVHSTPGYSVVNLRYPPVRVLVYIKSADEAGLWLDGLPRGVVAFAPVEKPFTVVGIGKKKFTIRRRQVPLTAGCLSSMYRSQGQTMRTITLDISNPPGNRMDPAAVYVALSRATCLDDIYLLFPVTLENLNKPRNKDVVALIEYLQRLDKATLSAFLQDPTRFTPASASLAALAEVGPRALTKKQQRKGVNRHGRGATRRTAHLLPNSDNNCFLNSSLALALAAWNAQQLLDTSALTPAGAAFIALVQLLRDSMFNGCELPQDIL 6224
MLDE N RF+P YAP+MER L E +DDV L+N+ ++ S AD+ F RVIAFRN+VNT+LTVPMMRTWC A GT LF+AAA DVY+ H PG + P A WPAGLR E+ S+ D NDLPT ACLA+GAPVV+H SPQFVLLGVCNNSDG+I IELD RE Y ST GYSVV LRY P+R+ VYIKSAD AGL LDGL RGV+A APVE+ FT+VGI K+KFT +RRQ+PLTAGCLSS+YRSQGQTM I LDI PPG+ +D AAVYVALSRAT L D+ LLFPVTL++LN+P+N D+VA++ YL RLD+ T+ FL+DP FTPA A+L + E GPR K+ +R V RHG GATRR AHL+PN DNNCF NS+LALALAAW+ Q L DT+A TPA +F A +QLLRDSMF+ C+L +I+
Sbjct: 1 MLDESN-RFTPIYAPIMERCLRSECISDDVDLINNHVMGTSR--KADSLFDARVIAFRNKVNTVLTVPMMRTWCKAKGTTLFIAAAHDVYVGHQRPGATAEVPPTDAPWPAGLRREIKSLDDGKTNDLPTSACLAIGAPVVLHKSPQFVLLGVCNNSDGIIRGIELDPREGY-ASSTAGYSVVTLRYAPLRIFVYIKSADAAGLHLDGLQRGVIAVAPVERKFTIVGINKRKFTFKRRQIPLTAGCLSSVYRSQGQTMPKIILDIRRPPGHAVDCAAVYVALSRATGLGDLNLLFPVTLQDLNQPQNPDIVAIVNYLHRLDETTMVLFLKDPGSFTPAYATLDGIEEAGPRPPHKQPKR--VGRHGPGATRRVAHLIPNEDNNCFFNSALALALAAWDGQPLPDTTAGTPAAGSFFAALQLLRDSMFDECDLSPNIV 431
BLAST of mRNA_P-littoralis_Contig1065.2.2 vs. uniprot
Match: A0A6H5JT57_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT57_9PHAE) HSP 1 Score: 530 bits (1364), Expect = 6.740e-157 Identity = 406/1109 (36.61%), Postives = 545/1109 (49.14%), Query Frame = 3
Query: 2667 FAIRSNMDLKILLRDSDANWLLFYILNYSTKTEQTLDVLLPLLAPVTERIREESDGAADKELAVRLVGSCLCKQLSSLSIGGPAAASKVFDLPDDKISHATINCSMEPLLTWAT-SRDG--PLDGEADQGDERTTGDDDGXXXXXXXXSVLITAFKGKLTVAQRAYFFYLNRCHPDDTTHPVHGMSYVVWHKLVRVERCLPGREKPTKAASRVEPESDDSDDXXXXXXXXXXLGTSDSDDFGEDTSHPVSATSRPSSRGRPRRDRFPVLGEFKNKWQQGRLPVMREKSAMVNIMRDFPRADTQPVAHARLLLCMFVPFFELDDLKLD------------------------------GMLAQRLAADEETAKRKAEAAVMTERRDPTST----ETEGEVLVGDYQNDDD-DINVMPATVQRLKTLLFVTDALRSFTKAGFSKDNSAPTSASSLLSGRTLDDAAGDVSKVVPGATASWAKVAMTRQQSSLEKMTSNHVSSLADADAEHPAPSTAQSRTRDPAPLAPYLMQIRNAAHAGLSDSARLQRCAKRDATNEAVAKTDVGASAASQYPVAFSIAQEFGLNRKQRLAFYIFANGLLAQHRPDPPEALRLYIGGGAGTGKSHVLKAMKAFIDCPAIAGQIPPGRLLTVAFQGKMASAVGGRTAHSTC-----SSDGARDGSLSGDHDDQTSLNESKALAWKNVTTLAIEEVSMIGYKLLVSLHKAACSMFPLHKGKPFGNRLVVMLGDFNQLSPVKAKSLAFGAGNAANRRDMNVTERFGADLFRSANASVMLDEDNSRFSPTYAPVMERKLLGENNADDVRLLNSRLLTGSPGLHADNCFHGRVIAFRNRVNTILTVPMMRTWCMANGTPLFLAAASDVYITHLLPGFLKQKIPPGATWPAGLRDEVNSIGDASANDLPTVACLAVGAPVVVHMSPQFVLLGVCNNSDGVIHSIELDQREDYLVHSTPGYSVVNLRYPPVRVLVYIKSADEAGLWLDGLPRGVVAFAPVEKPFTVVGIGKKKFTIRRRQVPLTAGCLSSMYRSQ----------------------------GQTMRTITLDISNPPGNRMDPAAVYVALSRATCLD 5780
F RSNMD+K LLRDSDA LFYILNYSTKTE T+D LL +LAPV ERI++E++GA A +LV +C CK ++ + +G PAAASKV D K + C M+PLL A+ S D P +G + D XXX ++L T+ GK+ ++ + YL RC P+DT HP HGM Y VW +LVR+E P ++KP + + DD+D XXXXXXX A R RGRP R +G QQ V RE+ ++NIMRD P+ DTQP HA+LLLC++ PFF++ DL+L GML QR AADEE R + RR P + +G++ D + D NVMP + +V +A+ AGFS+ ++ ++LLSGR+ A D SK +L K ++ D AP A ++ + L+PYL +R+ + AGLS A+ + +R TNEAVAKTDVG S+ Q+ IA EFGLNRKQRLAF+IF +A+ P ALRL++ GGAG+GKS+VL+A+ A IDCPA+ G + PG LLTVAFQGK A+ VGG T HS ++DGA D ++ QT L+E+KA W + LAIEEVSM+ L SLHKAA S+ P PF + V GD NQL+PV AKS+ FGA +++ M TER G F +ANA+V+LDE N+RFS TYAPVM+R L + DV N+R L GS D T+ + M W M+ + I SI+LD RE + GY VV+L +PPVRV+++I++A +AGL L L RG VA + F V G+ KK++ +R Q+PL G LSS+YR+Q G+T++T+ L ++ P MDP+A YVALSRAT +
Sbjct: 224 FCTRSNMDIKALLRDSDARGALFYILNYSTKTETTMDALLNVLAPVVERIKDEAEGAPAAVTAAQLVRACSCKTVAHMPVGAPAAASKVLGYTDAKSAPDARTCPMKPLLALASASFDALPPAEGSNENADXXXXXXXXXXXXDYHSGAILNTS-GGKIRISISLHELYLRRCLPNDTEHPYHGMCYAVWARLVRIENT-PRKQKPARRPN------DDNDRESGXXXXXXXXXX-----------XXXXAARR--KRGRPLAKRHDFVGLPTVHKQQ----VTREEPILINIMRDVPKQDTQPENHAQLLLCLYKPFFKIHDLRLPDEASWAVALRRTEESGLWDQRSTSMRINIKGMLRQRHAADEEN--RASSVLQSLRRRRPLGACGGADIDGDIFGADVDDTDPAGPNVMPPARNAHRVSAYVNNAVDRCLDAGFSRTDNDRLPQAALLSGRSSHQIAADASK------------------DALLKTRETEAATAVPDD----APDVAATKPYNADALSPYLRDLRSKSEAGLSKDAKDRMDRRRKETNEAVAKTDVGRSSPQQHDAVRRIADEFGLNRKQRLAFFIFGAAWIARDGVPTPNALRLHVSGGAGSGKSYVLRAIVALIDCPALKGVVQPGGLLTVAFQGKAAANVGGNTVHSVADVPRKNNDGAMDNTIG-----QTGLSEAKAARWTHAAALAIEEVSMVSCLQLGSLHKAAVSVRPSSASLPFAGMIYVTFGDLNQLAPVSAKSVVFGATDSSELHKMTHTERIGHSNFWAANAAVVLDETNNRFSATYAPVMDRVLRRVSTVTDVEAFNARTL-GSFSRLPDG--------------TLAKLSMKHCW----------------------------------------------------------------------MAQTITFRNKATSEKATIVSIDLDPREAIVDGEPEGYRVVHLVHPPVRVVIFIQTAYDAGLHLPSLNRGEVAVGVESRSFDVRGLHDKKYSFKRGQLPLLPGHLSSVYRAQHFIHAYMHTSVLPQLVSFCLSSCYLSSKGETIKTLLLHMTKPVDGVMDPSAAYVALSRATSFE 1193 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1065.2.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1065.2.2 >prot_P-littoralis_Contig1065.2.2 ID=prot_P-littoralis_Contig1065.2.2|Name=mRNA_P-littoralis_Contig1065.2.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=636bp MLDDILHPSVMHKCLSDFDSFMVNSIRRCESNARCTLSTSCAVCDRYCREback to top mRNA from alignment at P-littoralis_Contig1065:3176..11205+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1065.2.2 ID=mRNA_P-littoralis_Contig1065.2.2|Name=mRNA_P-littoralis_Contig1065.2.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=8030bp|location=Sequence derived from alignment at P-littoralis_Contig1065:3176..11205+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1065:3176..11205+ >mRNA_P-littoralis_Contig1065.2.2 ID=mRNA_P-littoralis_Contig1065.2.2|Name=mRNA_P-littoralis_Contig1065.2.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1908bp|location=Sequence derived from alignment at P-littoralis_Contig1065:3176..11205+ (Pylaiella littoralis U1_48)back to top |