mRNA_P-littoralis_Contig1065.2.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1065.2.2
Unique NamemRNA_P-littoralis_Contig1065.2.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1065.2.2 vs. uniprot
Match: A0A6H5L0L4_9PHAE (Helitron_like_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0L4_9PHAE)

HSP 1 Score: 1363 bits (3528), Expect = 0.000e+0
Identity = 708/963 (73.52%), Postives = 768/963 (79.75%), Query Frame = 1
Query:    1 RQAERFGQQHDAGLLPFAPIIKERPVLAFDHGQGRIDGHDKPHMLDDILHPSVMHKCLSDFDSFMVNSIRRCESNARCTLSTSCAVCDRYCREKDYKLVSVNDLPQKHLLLANDSLLNCAAVKHEFFNYPGDDGNILDGHVVARQGFETDG--RLRVCVECLNSLLKDKMPETALANGLWLGDFPEHLRSATFVEMVAASPVRISGMVLALDELRVGNIGGSARSLMRGTFTFYMQDAYGVQLRLPACDTDIAGSFTCALVGAKPSVAQLRKLFGARRKMVEDLLAFQLDASNDLVGVHELAREAQLSKDNLDTYNEDGSIPQAILDAMIPVKDTTNAYANAHSTHAHGNREPE----------TVDHRGDAEGGGHGPVDTATTPPFIIEANAIMPSGDDLAVSSHAKPGRLRTLGSSLKSPHRGRPSGASAT---ASLAQLAAAQAREARGQAPDGTDNALVVTHSGRMVSDVTNPGLFVGAYFDLFPHGVGGHLDKRPRPLDLKKWAQIFLWRRDPGFRKNRTSLYCVCSLIFRREAISNARWKLSGRVSRGMAADIASVTAQDLRAVASEMETGSSGFSALADRPGIRALIKSMESVHAGASWTIYNKRSTRMIAISFILQMGQPLFWLTINPADVNSPIVMILAGVELDVTRRLKRGFPVYADKLRLVANDPVASAEFFHATIDAVLT*LLRFGACDGDGGVLGRVKGYVGMTEEQKRLTLHCHLLVWVFGYNDFASFRDLMDKTPTRYRELAQCLDRVIFNQIATLSDINHVMRGVQHATSSGVESDDAIPPADPLVRDAKECMATPPPPSCFPRGGEPRNNLDDDTYGRVIYLDLAGVTRGASLHKCQATCRKYNHADSC------------------------------------------------------------SIEKLVGDDGLPDPLSDRFTAELRRLHSHINSFNPV 2664
            RQA+R G    A  L FAP++K+RP+LAF+H QGRIDGHD PH+LDDI HPSVMHKCL+DFD+FMVNSIRR          TSCAVCDRYCR+   KLV+V DLP K+LL+AN+SLLNCAAV+ EFFNYPGD  N+LDGHV+ARQGF+ D    LRVC ECLNSLLKDKMPE ALANGLWLGDFP+HLR ATFVEM+AASPVRISGMVLALDEL+VGN+ GSA+SLMRGTFTFYMQDAYGVQLRLPACDTDIAGSFTCALVGAKPSV QLRKLFGARRKMVEDLLAFQLD  N LVGVH+LA+EAQLS +NLDTY +DGSIP+AI DA++PV D+TNAYANA STHAHGNREP+            DH  D  G          TPPFIIE NAIMPSGDDLAVSSHAKPGRLRTLG  L S H GRPS A+A    ASL Q+AAAQAR A GQ PDGT NALV+THSG+MVSD  NPGLFVGAYFDLFPHGVGGHLDKR RPLDLK+WAQI L RRD  FRK+RT LYCVC+LIFRREAISNARWKL GRV R +A+ IA VTAQDLRAVA+EMETGSSGFSALADRPGIR LIK+MESVHAGASWTIYNKRSTRMIAISFI+QMGQPLFWLTINPADVNSPIVM+LAGVELDVT RLK  FP YADKLR VANDPVASA+FFHATIDAVLT LLRFGACDGDGGVLGRVKGYVGMTEEQKRLTLHCHLLVWV+GYNDFASFR+LMDKTPTRY ELA+ LD+VIFNQIATLSDINHVMRGVQ   S  VE+D   PP D L+R AKE MA PPP SCFPR G+PRNN+ DD Y  ++YLDLAG+T GA+LHKCQATCRK+NH DSC                                                            SI  LV D+GLPDPLSDRFTAELRRLHSHINSFNPV
Sbjct:   38 RQAKRLGHGRAARPLAFAPVVKQRPILAFNHSQGRIDGHDTPHLLDDIHHPSVMHKCLADFDTFMVNSIRR----------TSCAVCDRYCRKMHCKLVAVKDLPHKYLLVANESLLNCAAVRDEFFNYPGDHRNVLDGHVLARQGFQPDAPHHLRVCQECLNSLLKDKMPEAALANGLWLGDFPDHLRGATFVEMMAASPVRISGMVLALDELKVGNVRGSAKSLMRGTFTFYMQDAYGVQLRLPACDTDIAGSFTCALVGAKPSVGQLRKLFGARRKMVEDLLAFQLDKDNQLVGVHQLAQEAQLSAENLDTYKDDGSIPKAIFDALLPVNDSTNAYANARSTHAHGNREPDDHEDGPAPPAAADHADDGAG---------ATPPFIIETNAIMPSGDDLAVSSHAKPGRLRTLGVVLNSRHGGRPSAATAASGDASLPQMAAAQARAAAGQPPDGTQNALVLTHSGQMVSDFHNPGLFVGAYFDLFPHGVGGHLDKRTRPLDLKRWAQILLRRRDARFRKSRTFLYCVCALIFRREAISNARWKLRGRVPRDVASRIARVTAQDLRAVAAEMETGSSGFSALADRPGIRDLIKNMESVHAGASWTIYNKRSTRMIAISFIMQMGQPLFWLTINPADVNSPIVMVLAGVELDVTSRLKADFPAYADKLRFVANDPVASADFFHATIDAVLTCLLRFGACDGDGGVLGRVKGYVGMTEEQKRLTLHCHLLVWVYGYNDFASFRELMDKTPTRYFELAEYLDKVIFNQIATLSDINHVMRGVQ--PSPEVETDAPAPPPDQLMRPAKERMAVPPPSSCFPRDGQPRNNVHDDKYAHLMYLDLAGLTGGANLHKCQATCRKFNHGDSCRFGFGDKGKPLVQKTVVQRGRCVFDTDGNMTINGIVYSWSSAKDAAAAASNEAFRAAFDASIAHLVNDNGLPDPLSDRFTAELRRLHSHINSFNPV 979          
BLAST of mRNA_P-littoralis_Contig1065.2.2 vs. uniprot
Match: D7G3U9_ECTSI (ATP-dependent DNA helicase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3U9_ECTSI)

HSP 1 Score: 1337 bits (3459), Expect = 0.000e+0
Identity = 748/1192 (62.75%), Postives = 892/1192 (74.83%), Query Frame = 3
Query: 2664 QFAIRSNMDLKILLRDSDANWLLFYILNYSTKTEQTLDVLLPLLAPVTERIREESDGAADKELAVRLVGSCLCKQLSSLSIGGPAAASKVFDLPDDKISHATINCSMEPLLTWATSRDGPLDGEADQGDERTTGDDDGXXXXXXXXSVLITAFKGKLTVAQRAYFFYLNRCHPDDTTHPVHGMSYVVWHKLVRVERCLP-GREKPTKAASRVEPESDDSDDXXXXXXXXXXLGTSDSDDFGEDTSHPVSATSRPSSR--GRPRRDRFPVLGEFKNKWQQGRLPVMREKSAMVNIMRDFPRADTQPVAHARLLLCMFVPFFELDDLKLDGMLAQRLAADEETAKRKAEAAVMTERRDPTSTETE-GEVLVGDYQNDDDDINVMPATVQRLKTLLFVTDALRSFTKAGFSKDNSAPTSASSLLSGRTLDDAAGDVSKVVPGATASWAKVAMTRQQSSLEKMTSNHVSSLADADAEHPAPSTAQSRTRDPAPLAPYLMQIRNAAHAGLSDSARLQRCAKRDATNEAVAKTDVGASAASQYPVAFSIAQEFGLNRKQRLAFYIFANGLLAQHRPDPPEALRLYIGGGAGTGKSHVLKAMKAFIDCPAIAGQIPPGRLLTVAFQGKMASAVGGRTAHSTCSSDGARDG-SLSGDHDDQTSLNESKALAWKNVTTLAIEEVSMIGYKLLVSLHKAACSMFPLHKGKPFGNRLVVMLGDFNQLSPVKAKSLAFGAGNAANRRDMNVTERFGADLFRSANASVMLDEDNSRFSPTYAPVMERKLLGENNADDVRLLNSRLLTGSPGLHADNCFHGRVIAFRNRVNTILTVPMMRTWCMANGTPLFLAAASDVYITHLLPGFLKQKIPPGATWPAGLRDEVNSIGDASANDLPTVACLAVGAPVVVHMSPQFVLLGVCNNSDGVIHSIELDQREDYLVHSTPGYSVVNLRYPPVRVLVYIKSADEAGLWLDGLPRGVVAFAPVEKPFTVVGIGKKKFTIRRRQVPLTAGCLSSMYRSQGQTMRTITLDISNPPGNRMDPAAVYVALSRATCLDDIYLLFPVTLENLNKPRNKDVVALIEYLQRLDKATLSAFLQDPTRFTPASASLAALAEVGPRALTKKQQRKGVNRHGRGATRRTAHLLPNSDNNCFLNSSLALALAAWNAQQLLDTSALTPAGAAFIALVQLLRDSMFNGCELPQDIL 6224
            QFAIRSNMDLK+LLRDSDA  +LFYILNYSTKTEQTLDVLLPLL PV ERIR+E+D   DKELAVRLV SCLCKQLSSL+IGGPAAASKV D+PD KISH  + C M PLLTWA SRDGPLDG+  + D+        XXXXXXXX V+IT FKGKLTVAQRAY  Y NRCHPDDT H +HGMSYV WHKLVRV R  P    +P  A S     SD SD              +DSD        PVS + R +S   GRPR  R+  +GE+K+KWQQ    V+REK AMVNIMRD PR DTQPVAH RLLLCM++PFF LDDLK  GMLAQ+LAA EETAKR+A+ A  T   D     ++  EV + DY +D+   +V+P + +RL+T  FV DALRSF  AGFS D+S P SA  LLSGRT      D S +  G   + + + + RQ+SSL++ +++  +S+AD DA+  +  +  + T    P+ PYL+++R A+  GLSD AR +R A+R ATN AVA+TDVG ++  Q+ VA SIAQEFGLNR+QRLAF+IFANGLLAQ RP+PPEALR+YIGGGAGTGKSHVLKA+KAFI+CPAIA ++P GRLLTVA+QGK A++VGG T HS CS+ G+RDG +LSGDHDDQ+SL ++KA+ WK V+ LAIEEVSM+G  LLV LHKAACSMFP+HK KPFGNR+VVMLGDF+QLSPVKAKSLA GAG +  RRDM VTER+GADLFRSANA VMLDE N RF+P YAP+MER L  E  +DDV L+N+ ++  S    AD+ F  RVIAFRN+VNT+LTVPMMRTWC A GT LF+AAA DVY+ H  PG   +  P  A WPAGLR E+ S+ D   NDLPT ACLA+GAPVV+H SPQFVLLGVCNNSDG+I  IELD RE Y   ST GYSVV LRY P+R+ VYIKSAD AGL LDGL RGV+A APVE+ FT+VGI K+KFT +RRQ+PLTAGCLSS+YRSQGQTM  I LDI  PPG+ +D AAVYVALSRAT L D+ LLFPVTL++LN+P+N D+VA++ YL RLD+ T+  FL+DP  FTPA A+L  + E GPR   K+ +R  V RHG GATRR AHL+PN DNNCF NS+LALALAAW+ Q L DT+A TPA  +F A +QLLRDSMF+ C+L  +I+
Sbjct:  982 QFAIRSNMDLKVLLRDSDAKGILFYILNYSTKTEQTLDVLLPLLVPVVERIRDEADRVDDKELAVRLVRSCLCKQLSSLNIGGPAAASKVLDMPDHKISHHPVPCPMSPLLTWACSRDGPLDGDTSRPDDXXXX----XXXXXXXXDVIITPFKGKLTVAQRAYLLYRNRCHPDDTGHVLHGMSYVFWHKLVRVIRYDPLDNRQPDLAQS-----SDASD--------------TDSDCDTVQPGDPVSPSGRRASARTGRPRACRYDFVGEYKHKWQQ----VLREKPAMVNIMRDIPRKDTQPVAHCRLLLCMYIPFFTLDDLKTTGMLAQKLAAAEETAKREAQNASFTASPDKQQDNSDKAEVHLCDYGDDEPGRSVIPTSARRLQTEFFVNDALRSFLAAGFSGDDSLPESAFPLLSGRTRQQTMEDASHITLGTDVAASTLFVARQESSLQQKSTSCAASMAD-DAQPVSSPSYSTGTDGGPPVQPYLIRLRAASQEGLSDQARGERDARRVATNAAVAQTDVGRTSNLQHSVAVSIAQEFGLNRRQRLAFFIFANGLLAQSRPNPPEALRIYIGGGAGTGKSHVLKAIKAFIECPAIAAEVPRGRLLTVAYQGKQAASVGGTTVHSVCST-GSRDGGNLSGDHDDQSSLPDAKAMHWKGVSVLAIEEVSMVGCNLLVQLHKAACSMFPIHKAKPFGNRVVVMLGDFHQLSPVKAKSLACGAGVSTRRRDMTVTERYGADLFRSANACVMLDESN-RFTPIYAPIMERCLRSECISDDVDLINNHVMGTSR--KADSLFDARVIAFRNKVNTVLTVPMMRTWCKAKGTTLFIAAAHDVYVGHQRPGATAEVPPTDAPWPAGLRREIKSLDDGKTNDLPTSACLAIGAPVVLHKSPQFVLLGVCNNSDGIIRGIELDPREGY-ASSTAGYSVVTLRYAPLRIFVYIKSADAAGLHLDGLQRGVIAVAPVERKFTIVGINKRKFTFKRRQIPLTAGCLSSVYRSQGQTMPKIILDIRRPPGHAVDCAAVYVALSRATGLGDLNLLFPVTLQDLNQPQNPDIVAIVNYLHRLDETTMVLFLKDPGSFTPAYATLDGIEEAGPRPPHKQPKR--VGRHGPGATRRVAHLIPNEDNNCFFNSALALALAAWDGQPLPDTTAGTPAAGSFFAALQLLRDSMFDECDLSPNIV 2138          
BLAST of mRNA_P-littoralis_Contig1065.2.2 vs. uniprot
Match: A0A6H5K8N9_9PHAE (Helitron_like_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8N9_9PHAE)

HSP 1 Score: 1257 bits (3253), Expect = 0.000e+0
Identity = 656/882 (74.38%), Postives = 707/882 (80.16%), Query Frame = 1
Query:  244 TSCAVCDRYCREKDYKLVSVNDLPQKHLLLANDSLLNCAAVKHEFFNYPGDDGNILDGHVVARQGFETDG--RLRVCVECLNSLLKDKMPETALANGLWLGDFPEHLRSATFVEMVAASPVRISGMVLALDELRVGNIGGSARSLMRGTFTFYMQDAYGVQLRLPACDTDIAGSFTCALVGAKPSVAQLRKLFGARRKMVEDLLAFQLDASNDLVGVHELAREAQLSKDNLDTYNEDGSIPQAILDAMIPVKDTTNAYANAHSTHAHGNREPE----------TVDHRGDAEGGGHGPVDTATTPPFIIEANAIMPSGDDLAVSSHAKPGRLRTLGSSLKSPHRGRPSGASAT---ASLAQLAAAQAREARGQAPDGTDNALVVTHSGRMVSDVTNPGLFVGAYFDLFPHGVGGHLDKRPRPLDLKKWAQIFLWRRDPGFRKNRTSLYCVCSLIFRREAISNARWKLSGRVSRGMAADIASVTAQDLRAVASEMETGSSGFSALADRPGIRALIKSMESVHAGASWTIYNKRSTRMIAISFILQMGQPLFWLTINPADVNSPIVMILAGVELDVTRRLKRGFPVYADKLRLVANDPVASAEFFHATIDAVLT*LLRFGACDGDGGVLGRVKGYVGMTEEQKRLTLHCHLLVWVFGYNDFASFRDLMDKTPTRYRELAQCLDRVIFNQIATLSDINHVMRGVQHATSSGVESDDAIPPADPLVRDAKECMATPPPPSCFPRGGEPRNNLDDDTYGRVIYLDLAGVTRGASLHKCQATCRKYNHADSC------------------------------------------------------------SIEKLVGDDGLPDPLSDRFTAELRRLHSHINSFNPV 2664
            TSCAVCDRYCR+   KLV+V DLP K+LL+AN+SLLNCAAV+ EFFNYPGD  N+LDGHV+ARQGF+ D    LRVC ECLNSLLKDKMPE ALANGLWLGDFP+HLR ATFVEM+AASPVRISGMVLALDEL+VGN+ GSA+SLMRGTFTFYMQDAYGVQLRLPACDTDIAGSFTCALVGAKPSV QLRKLFGARRKMVEDLLAFQLD  N LVGVH+LA+EAQLS +NLDTY +DGSIP+AI DA++PV D+TNAYANA STHAHGNREP+            DH  D  G          TPPFIIE NAIMPSGDDLAVSSHAKPGRLRTLG  L S H GRPS A+A    ASL Q+AAAQAR A GQ PDGT NALV+THSG+MVSD  NPGLFVGAYFDLFPHGVGGHLDKR RPLDLK+WAQI L RRD  FRK+RT LYCVC+LIFRREAISNARWKL GRV R +A+ IA VTAQDLRAVA+EMETGSSGFSALADRPGIR LIK+ME VHAGASWTIYNKRSTRMIAISFI+QMGQPLFWLTINPADVNSPIVM+LAGVELDVT RLK  FP YADKLR VANDPVASA+FFHATIDAVLT LLRFGACDGDGGVLGRVKGYVGMTEEQKRLTLHCHLLVWV+GYNDFASFR+LMDKTPTRY ELA+ LD+VIFNQIATLSDINHVMRGVQ   S  VE+D   PP D L+R AKE MA PPP SCFPR G+PRNN+ DD Y  ++YLDLAG+T GA+LHKCQATCRK+NH DSC                                                            SI  LV D+GLPDPLSDRFTAELRRLHSHINSFNPV
Sbjct:   29 TSCAVCDRYCRKMHCKLVAVKDLPHKYLLVANESLLNCAAVRDEFFNYPGDHRNVLDGHVLARQGFQPDAPHHLRVCQECLNSLLKDKMPEAALANGLWLGDFPDHLRGATFVEMMAASPVRISGMVLALDELKVGNVRGSAKSLMRGTFTFYMQDAYGVQLRLPACDTDIAGSFTCALVGAKPSVGQLRKLFGARRKMVEDLLAFQLDKDNQLVGVHQLAQEAQLSAENLDTYKDDGSIPKAIFDALLPVNDSTNAYANARSTHAHGNREPDDHEDGPAPPAAADHADDGAG---------ATPPFIIETNAIMPSGDDLAVSSHAKPGRLRTLGVVLNSRHGGRPSAATAASGDASLPQMAAAQARAAAGQPPDGTQNALVLTHSGQMVSDFHNPGLFVGAYFDLFPHGVGGHLDKRTRPLDLKRWAQILLRRRDARFRKSRTFLYCVCALIFRREAISNARWKLRGRVPRDVASRIAGVTAQDLRAVAAEMETGSSGFSALADRPGIRDLIKNMEFVHAGASWTIYNKRSTRMIAISFIMQMGQPLFWLTINPADVNSPIVMVLAGVELDVTSRLKADFPAYADKLRFVANDPVASADFFHATIDAVLTCLLRFGACDGDGGVLGRVKGYVGMTEEQKRLTLHCHLLVWVYGYNDFASFRELMDKTPTRYFELAEYLDKVIFNQIATLSDINHVMRGVQ--PSPEVETDVPAPPPDQLMRPAKERMAVPPPSSCFPRDGQPRNNVHDDKYAHLMYLDLAGLTGGANLHKCQATCRKFNHGDSCRFGFGDKGKPLVQKTVVQRGRCVFDTDGNMTINGIVYSWSSAKDAAAAASNEAFRAAFDASIAHLVNDNGLPDPLSDRFTAELRRLHSHINSFNPV 899          
BLAST of mRNA_P-littoralis_Contig1065.2.2 vs. uniprot
Match: A0A6H5KIB1_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIB1_9PHAE)

HSP 1 Score: 1062 bits (2746), Expect = 0.000e+0
Identity = 637/1338 (47.61%), Postives = 797/1338 (59.57%), Query Frame = 3
Query: 2667 FAIRSNMDLKILLRDSDANWLLFYILNYSTKTEQTLDVLLPLLAPVTERIREESDGAADKELAVRLVGSCLCKQLSSLSIGGPAAASKVFDLPDDKISHATINCSMEPLLTWATSRDGPLDGEADQGDERTTG-------DDDGXXXXXXXXSVLITAFKGKLTVAQRAYFFYLNRCHPDDTTHPVHGMSYVVWHKLVRVERC--LPGREKPTKAASRVEPESDDSDDXXXXXXXXXXLGTSDSDDFGEDTSHPVSATSRPSS-----RGRPRRDRFPVLGEFKNKWQQG--------------------RLPVMREKSAMVNIMRDFPRADTQPVAH---------------------------------------------ARLLLCMFVPFFELDDLK-----------------------------LDGMLAQRLAADEETAKRKAEAAVMTERRDPTSTETEGEVLVGDYQNDDDD-INVMPATVQRLKTLLFVTDALRSFTKAGFSKDNSAPTSASSLLSGRTLDDAAGDVSKVVPGATASWAKVAMTRQQSSLEKM------------------------------------------TSNHVSSLADADAEHPAPSTAQS-RTRDPAPLAPYLMQIRNAAHAGLSDSARLQRCAKRDATNEAVAKTDVGASAASQYPVAFSIAQEFGLNRKQRLAFYIFANGLLAQHRPDPPEALRLYIGGGAGTGKSHVLKAMKAFIDCPAIAGQIPPGRLLTVAFQGKMASAVGGRTAHSTCSSDGARDGSLSGDHDDQTSLNESKALAWKNVTTLAIEEVSMIGYKLLVSLHKAACSMFPLHKGKPFGNRLVVMLGDFNQLSPVKAKSLAFGAGNAANRRDMNVTERFGADLFRSANASVMLDEDNSRFSPTYAPVMERKLLGENNADDVRLLNSRLLTGSPGLHADNCFHGRVIAFRNRVNTILTVPMMRTWCMANGTPLFLAAASDVYITHLLPGFLKQKIPPGATWPAGLRDEVNSIGDASANDLPTVACLAVGAPVVVHMSPQFVLLGVCNNSDGVIHSIELDQREDYLVHSTPGYSVVNLRYPPVRVLVYIKSADEAGLWLDGLPRGVVAFAPVEKPFTVVGIGKKKFTIRRRQVPLTAGCLSSMYRSQGQTMRTITLDISNPPGNRMDPAAVYVALSRATCLDDIYLLFPVTLENLNKPRNKDVVALIEYLQRLDKATLSAFLQDPTRFTPASASLAALAEVGPRALTKKQQRKGVNRHGRGATRRTAHLLPNSDNNCFLNSSLALALAAWNAQQLLDTSALTPAGAAFIALVQLLRDSMFNGCELPQDIL 6224
            FA+RSNMD+K+LL+ SDA  LL+YILNY+TKTEQTLDVLLPLL PV ERIR +S  A +KE+AVRLV SCLCKQLSSL IGGPAAASKV  L D+K+SH+ + C M PLLTWA+ RD P D +   GD+           DD G         V+IT F+GKLTVAQR +  Y +RC PDDT HP+H  SY  W + VR+E+C  L GR +  + ++R   + DD DD          L     DD       PVS + R +S     RGRPR  R+ ++GE++NKW+QG                    R  ++REK A+ NI++D P +DTQPVAH                                             ARLL+CMFVPFF LDDLK                             ++GMLAQ+LAA EETAKR+AE  +++E+ D       G+VL+  Y  +D+   +V+PATV+R+ T LFV DA R+F  AGF+ D S+P  +S LLSGR+++DA  D+S V  G     A   ++RQ++ LE +                                          +S+  S+LA +D+      ++ S       P+ PY++++R A+  GLS  A   R  +RD TN  VA TD+GA AA Q+  AFSIAQEFGLNRKQR AFYIFANGLLAQ RPDPP ALRLYIGGGAGTGK+HVL+A++AF+D P +   +P  RLL VAFQGK A+AVGG T HS C +    DG LSG H+ Q++L  SKA  WK    LAIEE+SMI   LLV LH  ACSMFPLHKG+PFGNR+VVMLGDFNQL P+KA+SLA G      R  M VTER+G+DLFR ANA VML E N RFSP+YAPVMER L  +   DDV+LLN+ ++  S   +A + F   ++ FRN+V+TILT PMMR  C A GTPLF+A A DVY+ H  PG+ ++K    A WP GLR+E+NS+ DA   DLPT+A LAVGAPVVVH  PQFVLLGVCNNSDG+I  IELD RED+L+  TPGYSVVNLRY P+RV VYIK+AD+AGL L+GL RGVVA APVEK FT+ GIGK+KF  +RRQ+P                                                                   D++ +I YL RL K TL  F QD + FTPASASL A  + GP + +++Q+R+   RHG GA RR AHL+ NS+NNCF NS+LAL LAAW+ QQL  +SA TPA  +F + +QLLRD MFNG  LP  I+
Sbjct: 1064 FAVRSNMDIKVLLKGSDAKGLLYYILNYATKTEQTLDVLLPLLIPVVERIRADSGDAPEKEMAVRLVRSCLCKQLSSLPIGGPAAASKVLGLSDEKLSHSPVPCPMTPLLTWASKRDKPADADNSPGDDXXXXXXXXXXXDDSG---------VIITPFQGKLTVAQRTHLLYRSRCRPDDTEHPLHQKSYFAWCREVRIEKCPTLHGRPRGKQPSARGN-DDDDVDDVDDGHPGDECLD----DD-------PVSPSGRTASTRAPRRGRPRATRYELVGEYQNKWEQGALHPYVRTRLYPLCTCLTFARTHIVREKPAISNIIKDVPTSDTQPVAHGFSSFPLFPCLSSARRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXARLLICMFVPFFTLDDLKRADETWPDALRRADDDNRWDPGTYPFRLNIEGMLAQKLAAAEETAKRRAERQLLSEKPDTLGDNVAGDVLLDSYGGEDEPGESVIPATVRRMLTDLFVDDAFRTFVAAGFNGDGSSPDGSSPLLSGRSMEDACRDISFVCGGTDLEAATAFISRQENELENIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSSSSASALAGSDSHTTTAGSSNSIGVPKEDPIEPYIIELRKASQDGLSPEACRARDERRDRTNAEVADTDIGAVAALQHVAAFSIAQEFGLNRKQRQAFYIFANGLLAQCRPDPPPALRLYIGGGAGTGKTHVLRAIRAFVDSPPVKRLLPRARLLCVAFQGKQAAAVGGTTVHSVCPNTDDSDGCLSGAHEGQSTLPASKAAHWKGDVVLAIEEISMISCNLLVRLHNTACSMFPLHKGQPFGNRVVVMLGDFNQLRPIKARSLAHGTALQERRLGMTVTERYGSDLFRMANACVMLHESN-RFSPSYAPVMERCLYSKCTEDDVKLLNTCVMGASTTRNATSAFDAIIVTFRNKVSTILTAPMMRALCQARGTPLFVARAHDVYVKHQRPGYAEEKPATNAPWPTGLREEINSLDDAKTKDLPTLAFLAVGAPVVVHKKPQFVLLGVCNNSDGIIRGIELDPREDFLLDPTPGYSVVNLRYAPLRVFVYIKTADDAGLHLEGLDRGVVAIAPVEKEFTIEGIGKRKFIFKRRQLP-------------------------------------------------------------------DILGIINYLHRLGKETLKLFPQDASTFTPASASLDAATDEGPTS-SRRQRRRTTGRHGPGAARRVAHLIANSNNNCFFNSALALGLAAWDGQQLPPSSAGTPAAGSFFSALQLLRDCMFNGSTLPDHIV 2311          
BLAST of mRNA_P-littoralis_Contig1065.2.2 vs. uniprot
Match: A0A6H5JN07_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN07_9PHAE)

HSP 1 Score: 799 bits (2064), Expect = 1.390e-245
Identity = 522/1226 (42.58%), Postives = 693/1226 (56.53%), Query Frame = 3
Query: 2664 QFAIRSNMDLKILLRDSDANWLLFYILNYSTKTEQTLDVLLPLLAPVTERIREESDGAADKELAVRLVGSCLCKQLSSLSIGGPAAASKVFDLPDDKISHATINCSMEPLLTWATSRDGPLDGEADQGDERTTGDDDGXXXXXXXXSVLITAFKGKLTVAQRAYFFYLNRCHPDDTTHPVHGMSYVVWHKLVRVERCLPGREKPTKAASRVEPESDDSDDXXXXXXXXXXLGTSDSDDFGEDTSHPVSATSRPSSRGRPRRDRFPVLGEFKNKWQQGRLPVMREKSAMVNIMRDFPRADTQPVAHARLLLCMFVPFFELDDLKLDG----MLAQRLAADEETAKRKAEA---AVMTERRDPTSTETEGEVLVGDYQNDDDD-INVMPATVQRLKTLLFVTDALRSFTKAGFSKDNSAPTSASSLLSGRTLDDAAGDVSKVVPGATASWAKVA----MTRQQSSLEKMTSNHVSSLADADAEHPAPS-TAQSRTRDPAPLAPYLMQIRNAAHAGLSDSARLQRCAKRDATNEAVAKTDVGASAASQYPVAFSIAQEFGLNRKQRLAFYIFANGLLAQHRPDPPEALRLYIGGGAGTGKSHVLKAMKAFIDCPAIAGQIPPGRLLTVAFQGKMASAVGGRTAHSTCSSDGARD--GSLSGDHDDQTSLNESKALAWKNVTTLAIEEVSMIGYKLLVSLHKAACSMFPLHKGKPFGNRL------VVMLGDFNQLSPVKAKSLAFGAGNAANRRDMNVTERFGADLFRSANASVMLDEDNSRFSPTYAPVMERKLLGENNADDVRLLNSRLLTGSPGLHADNCFHGRVIAFRNRVNTILTVPMMRTWCMANGTPLFLAAASDVYITHLLPGFLKQKIPPGATWPAGLRDEVNSIGDASANDLPTVACLAVGAPVVVHMSPQFVLLGVCNNSDGVIHSIELDQREDYLVHSTPGYSVVNLRYPPVRVLVYIKSADEAGLWLDGLPRGVVAFAPVEKPFTVVGIG-KKKFTIRRRQVPLTAGCLSSM-------------YRSQGQTMRTITLDISNPPGNRMDPAAVYVALSRATCLDDIYLLFPVTLENLNKPRNKDVVALIEYLQRLDKATLSAFLQDPTRFTPASASLAALAE-VGPRALTKKQQRKGVNRHGR---GATRRTAHLLPNSDNNCFLNSSLALALAAWNAQQLLDTSALTPAGAAFIALVQLLRDSMFNGCELPQDIL 6224
            QF IRSNMDLK+LL D DA  ++FYILNY+TKT                    ES G   KE+ VRLV SCLCKQL+SLS GGPAAASKVFDL D KIS  T  C M  L+                                        AF GKLT  QR++  Y NRC   DT HP+H +SYVVWH+ VRVER  PG    +   +R + ++D SDD                     D   P      P  RGR   D +  +G+++ KW Q    V+R K+ MVNIMRD PRADTQ   H RLLLCMF+PFF+L +LK          QR+   +   K++A     A M+   D      E ++ + +Y +DD+D  +V+P T   L+T + V  AL              P  +    SGR+ +D   D++K+      SW+  +    M +Q+  LE MT + V+SLA++ +       T  S   DP  L PYL+++R+A+ A                                          EFGLNRKQRLAF++F+NG+LA+      ++LRLYIGGGA +GKSHVLKAMKAFI+CPA+ GQI   R+L VAF+G+ A+AVGG T HS C   G +   GSLS +HDDQ+ + +++A+ WK V  LA+EEVSM+G +LLV+L+KAACSMFP+HK KPFGN        +V+ G FNQLS        + +      ++M+   ++GADLFR  NA V+LD+ ++RFSPTYAP+M+R LL     +D+RL ++R+L GSPGLHA +C+ GRV       NT+LTVPMMRTWC AN TPLF+A A D ++    PG               LRDE++S+ DA  NDLPT+ACLA+GAPVV+H  PQFV+LGVCNNSDG+I  IE+ QRE+                    V VYI++A +AGL L  L RGV +  PVE+ F++V    K+KFT  R+QVPLTAGCLS++               S   ++R I LD+  PP   +DPA+ Y+ALSRAT L+D+YLLFPVTLE+L++PRNKDVVALIE+L RL++ T      D + FT  SASL++  + +     T   + +G +R GR    +T   A L+ N +NN FLNS++AL LAA++     D    TPAGAAF   ++L++D+MFNG  L QD L
Sbjct:  995 QFVIRSNMDLKVLLEDIDAKGIMFYILNYATKTAN------------------ESQGETSKEMVVRLVRSCLCKQLASLSFGGPAAASKVFDLSDAKISLYTSPCPMGSLI----------------------------------------AFGGKLTAKQRSHLRYRNRCDRTDTEHPLHCVSYVVWHRPVRVERYTPGA---SNCVNRSDTDNDSSDD---------------------DMDEPQHT---PQRRGRASSDPYDCVGKYRKKWIQ----VVRRKAVMVNIMRDIPRADTQQEDHCRLLLCMFLPFFDLSNLKNSDESWESAMQRVEDSDSWDKQRANKENDAPMSHSLDDAGHGAENDIFLIEYGDDDNDSASVIPETAIGLRTKIVVDTAL--------------PVRSWHPRSGRSTEDVETDLTKIT-----SWSGSSDPTYMAQQEKCLEAMTESEVASLAESTSXXXXXXXTTDSHEYDPKVLDPYLLELRSASQA------------------------------------------EFGLNRKQRLAFFVFSNGMLAKKVSPGSDSLRLYIGGGAKSGKSHVLKAMKAFIECPALVGQIEDSRMLAVAFRGQQAAAVGGTTIHSVCQV-GRKTFRGSLSRNHDDQSPMKDTQAIHWKGVNMLAVEEVSMVGCELLVALNKAACSMFPMHKDKPFGNLQPFGNLPLVLCGGFNQLS----NFTCYWSWQLEKEKNMSSLVKYGADLFRMVNACVVLDQGSNRFSPTYAPLMDRLLLSSPTYNDIRLFDTRVLNGSPGLHAFDCYDGRV-------NTVLTVPMMRTWCKANITPLFIAPAMDSFVGDERPG---------------LRDEISSLDDAKTNDLPTLACLAIGAPVVLHKQPQFVILGVCNNSDGIIRGIEITQREE--------------------VFVYIQTAYDAGLKLPDLCRGVTSVGPVERNFSIVITKTKRKFTFSRKQVPLTAGCLSALGSDYIASSCLYHPILSHCVSLRRIILDLQKPPQPLVDPASSYLALSRATYLEDLYLLFPVTLEDLSRPRNKDVVALIEFLHRLEETTSLLSHPDRSTFTLTSASLSSDGDAIDGEDNTSTGRTRGGSRPGRHLPASTPSIARLIANKNNNYFLNSAMALTLAAFDGLSPPDGRDCTPAGAAFFPAIKLIQDTMFNGESLQQDTL 2023          
BLAST of mRNA_P-littoralis_Contig1065.2.2 vs. uniprot
Match: A0A6H5KTA2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTA2_9PHAE)

HSP 1 Score: 810 bits (2093), Expect = 2.500e-241
Identity = 441/875 (50.40%), Postives = 565/875 (64.57%), Query Frame = 1
Query:   49 FAPIIKERPVLAFDHGQGRIDGHDKPHMLDDILHPSVMHKCLSDFDSFMVNSIRRCESNARCTLSTSCAVCDRYCREKDYKLVSVNDLPQKHLLLANDSLLNCAAVKHEFFNYPGDDGNILDGHVVARQGFETDG--RLRVCVECLNSLLKDKMPETALANGLWLGDFPEHLRSATFVEMVAASPVRISGMVLALDELRVGNIGGSARSLMRGTFTFYMQDAYGVQLRLPACDTDIAGSFTCALVGAKPSVAQLRKLFGARRKMVEDLLAFQLDASNDLVGVHELAREAQLSKDNLDTYNEDGSIPQAILDAMIPVKDTTNAYANAHSTHAHGNREPET-VDHRGDAEGGGHGPVDTATTPPFIIEANAIMPSGDDLAVSSHAKPGRLRTLGSSLKSPHRGRPSGASATASLAQLAAAQAREARGQAP-----------------------DGTDNALVVTHSGRMVSDVTNPGLFVGAYFDLFPHGVGGHLDKRPRPLDLKKWAQIFLWRRDPGFRKNRTSLYCVCSLIFRREAISNARWKLSGRVSRGMAADIASVTAQDLRAVASEMETGSSGFSALADRPGIRALIKSMESVHAGASWTIYNKRSTRMIAISFILQMGQPLFWLTINPADVNSPIVMILAGVELDVTRRLKRGFPVYADKLRLVANDPVASAEFFHATIDAVLT*LLRFGACDGDGGVLGRVKGYVGMTEEQKRLTLHCHLLVWVFGYNDFASFRDLMDKTPTRYRELAQCLDRVIFNQIATLSDINHVMRGVQHATSSGVESDDAIPPA-DPLVRDAKECMATPPPPSCFPRGGEPRNNLDDDTYGRVIYLDLAGVTRGASLHKCQATCRKYNHADSCSIEKLVGDDGLP 2592
            +AP + E PV AF+H +GR DGHD+P +  D+L  S++ KC++DF ++M ++I           S SCAVCD  CR  D + VS N+LP + LL A   L    ++ ++  +YPGD    LDG V+AR+GFE+    RLRVC ECL  L  +K P   LANGLW+GDFPEHL+ +T+VEM AASPVR SGMV AL++L+VG I GSA  +MRGTFTF+ Q+AYGV+  LP CDTDIAGS TCALVGA+P+ AQLRKL GARR  +++L+ FQ D  N L G H L + AQ S +NLDT+ +DGS+P  ILD++IP  D +     A S++   NR+PET VD   +A  G     +    P FII+  A++PSG + AVSS ++P RLRTL + L +        A   A  A        +A G  P                       + T N LV+ H+G+MV D   PG+ + AYFDLFPHGVGGHLDKR RPL+  KWA+  L RRDP FRKNRT ++C+ ++IFRREAISNA WKL+GRVSRG+A ++  +T  DL AVA E+E G+S   ALA+RP  R LI++M+SV+  ASWT++NKR+ RM AIS I+Q+GQPLFW+TINPAD NSP+VM LAGV+LDV+ RLK   P Y  +L+L+A DPVASAEFFH  IDAV+  LLRFGA DGDGGVLGRVK YVGMTEEQ+RLTLHCHLLVWV                   Y+ELA  L R IF+Q+A+  D+ H M G      S    D   PP+ DPL R A E +A PPP +CFP  G  R+   D+ Y   +  +LA +T+ A++H+C  TC K+ HA+SC      G DG P
Sbjct: 2172 YAPTVTETPVTAFNHPEGRSDGHDRPALTKDVLGTSMLFKCIADFHTYMADNIH----------SVSCAVCDLMCRRIDCEWVSANELPNRSLLTAGPHLKAHDSIMNDMKDYPGDTNKCLDGLVLAREGFESGPLHRLRVCSECLRDLNSNKTPYATLANGLWVGDFPEHLKDSTWVEMAAASPVRTSGMVFALEQLKVGAIPGSAHRMMRGTFTFFFQNAYGVEKVLPTCDTDIAGSMTCALVGARPTEAQLRKLLGARRSRIQELMDFQRDEQNQLAGEHVLFKRAQTSVENLDTFPQDGSVPPRILDSLIPAVDASRLREKASSSYVRDNRQPETPVDDADEAVDG----QNADDNPAFIIDNCAVIPSGREQAVSSESRPERLRTLQTDLINS-------AGTAAPTAMDVEEDDAQAAGSTPSXXXXXXXXXXXXXXXXXXXXXXEQTKNMLVLPHTGKMVEDFNEPGVMIAAYFDLFPHGVGGHLDKRQRPLNFTKWARCLLRRRDPRFRKNRTFVFCLAAIIFRREAISNAHWKLTGRVSRGVAQELDGITPDDLLAVAREIEGGTSTAKALANRPAARQLIRTMQSVNGDASWTMFNKRTLRMKAISMIIQLGQPLFWMTINPADSNSPVVMKLAGVDLDVSSRLKTDLPQYVKRLQLIAADPVASAEFFHVMIDAVMKTLLRFGAKDGDGGVLGRVKAYVGMTEEQRRLTLHCHLLVWV-------------------YQELASFLSRTIFSQVASDEDVQHAMTG--GIEPSNAPEDGTPPPSRDPLKRPATETIAMPPPSACFPPPGVERDVAADEQYLGPLRAELAEITKAANMHQCTYTCHKHGHANSCRFG--FGKDGKP 3002          
BLAST of mRNA_P-littoralis_Contig1065.2.2 vs. uniprot
Match: A0A6H5K882_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K882_9PHAE)

HSP 1 Score: 747 bits (1928), Expect = 4.930e-231
Identity = 503/1233 (40.79%), Postives = 651/1233 (52.80%), Query Frame = 3
Query: 2667 FAIRSNMDLKILLRDSDANWLLFYILNYSTKTEQTLDVLLPLLAPVTERIREESDGAADKELAVRLVGSCLCKQLSSLSIGGPAAASKVFDLPDDKISHATINCSMEPLLTWATSRDGPLDGEADQGDERTTGDDDGXXXXXXXXS---VLITAFKGKLTVAQRAYFFYLNRCHPDDTTHPVHGMSYVVWHKLVRVERCLPGREKPTKAASRVEPESDDSDDXXXXXXXXXXLGTSDSDDFGEDTSHPVSATSRPSSRGRPRRDRFPVLGEFKNKWQQGRLPVMREKSAMVNIMRDFPRADTQPVAHARLLLCMFVPFFELDDLK-----------------------------LDGMLAQRLAADEETAKRKAEAAVMTERRDP---TSTETEGEVLVGDYQ-NDDDDINVMPATVQRLKTLLFVTDALRSFTKAGFSKDNSAPTSASSLLSGRTLDDAAGDVSKVVPGATASWAKVAMTRQQSSLEKMTSNHVSSLADADAEHPAPSTAQSRTRDPAP-LAPYLMQIRNAAHAGLSDSARLQRCAKRDATNEAVAKTDVGASAASQYPVAFSIAQEFGLNRKQRLAFYIFANGLLAQHR-PDPPEALRLYIGGGAGTGKSHVLKAMKAFIDCPAIAGQIPPGRLLTVAFQGKMASAVGGRTAHSTCSSDGARDGSLSGDHDDQTSLNESKALAWKNVTTLAIEEVSMIGYKLLVSLHKAACSMFPLHKGKPFGNRLVVMLGDFNQLSPVKAKSLAFGAGNAANRRDMNVTERFGADLFRSANASVMLDEDNSRFSPTYAPVMERKLLGENNADDVRLLNSRLLTGSPGLHADNCFHGRVIAFRNRVNTILTVPMMRTWCMANGTPLFLAAASDVYITHLLPGFLKQKIPPGATWPAGLRDEVNSIGDASANDLPTVACLAVGAPVVVHMSPQFVLLGVCNNSDGVIHSIELDQREDYLVHSTPGYSVVNLRYPPVRVLVYIKSADEAGLWLDGLPRGVVAFAPVEKPFTVVGIGKKKFTIRRRQVPLTAGCLSSMYRSQGQTMRTITLDISNPPGNRMDPAAVYVALSRATCLDDIYLLFPVTLENLNKPRNKDVVALIEYLQRLDKATLSAFLQDPTRFTPASASLAALAEVGPRALTKKQQRKGVNRHGRG------ATRRT----AHLLPNSDNNCFLNSSLALALAAWNAQQLLDTSALTPAGAAFIALVQLLRDSMFNGCELPQDI 6221
            F IRSNMDL ++LRDSDA  LL+Y+L+YSTK+EQTLDVLLPLL PV +RIR+ ++G   KE AVRLV SCLCKQL+SL+IGGPAAASKVF LPD KISH T+ C M PLL WA+SRD P D E D GD  T+GD   XXXXXX      V+++   G+LTV Q A+  YL+RC P+DT H +HGMSYV W +LVR ER  P                                                                      FK  +   R  VMR+   MVNIMRD PR+DT+P AH RLLLC+FV  FEL+DLK                             + GML QR+AADEE A R+ E A ++          ++ E E+++ D   +DDDD +V   T Q +    FV DA  +F  AG   ++S                                                                    Q+ TRD      P   +  NA               +RD  N+ VA+TD+GA+A SQ+PVAF IAQEFGLNR+QRLAFYIFANG+ A+ R P  P                                  I  G +L VAFQGK A++VGG T HS C+  G R GS   DHDDQ  L E +AL+W+  + LA++E SM+G ++ ++L KAAC +FP+HK KPFGN + V  GDFNQL  + ++S                                           TY+              DV   N+R+L G+PGL A +C+ G+VI  RN+V T LT+P MRTWC + GT LF+++A+D ++     G  K+    GA WP  LR+EVNS+ D    DLP   CLAVG P+VVH SPQ VLLGVC+N DG++ +IELDQRE    H   GY VV+L++ PVRV V+I+S D++GL L G PRGVVAF P+E+   + G   + FTI+RRQ+PLT+GCLSS+          + LD+  PPG R+DPA++YVA SRA  L+D YLLFPVTL +L++PR+ DVVALI+ L+RL K TL+AF  DP+ F P++ SL           T      G N  GRG      A+RR     AHL+PNS NNCF NS++AL LA ++     + S  TPA  AF   ++L++D+M +G  +P+ I
Sbjct:  653 FLIRSNMDLNVMLRDSDARGLLYYVLHYSTKSEQTLDVLLPLLLPVVQRIRDHNEGEPAKETAVRLVRSCLCKQLTSLNIGGPAAASKVFGLPDAKISHTTVPCPMGPLLAWASSRDTP-DEEPDDGDS-TSGDXXXXXXXXXSDDQHGVVVSVVGGRLTVNQWAHVLYLHRCSPEDTEHALHGMSYVSWTRLVRTERYTP----------------------------------------------------------------------FKKAYNC-RQRVMRQGPVMVNIMRDIPRSDTKPEAHCRLLLCIFVALFELEDLKRVGDSWTTAMANVEQHDRWDKRTKPFRLNIAGMLRQRIAADEERAYREEEEAFVSGSSGQGMEMGSDGEDEIILNDLGGDDDDDQSVFLVTKQGILMQAFVHDAHDAFVSAGLRGNDS--------------------------------------------------------------------QAATRDVMCWFVPVECKSINA---------------RRDRNNQEVARTDIGAAAPSQHPVAFRIAQEFGLNREQRLAFYIFANGIFAKKRSPHSP----------------------------------IEEGGMLAVAFQGKQAASVGGTTIHSVCNVPG-RKGSGGKDHDDQKGLTEDQALSWEGKSVLAVKEASMVGCEMELALDKAACKVFPMHKDKPFGNMVAVFCGDFNQLRFLHSRS-------------------------------------------TYS--------------DVIKFNTRVLNGTPGLSAADCYDGKVITLRNKVTTALTMPTMRTWCQSRGTTLFISSATDEFVGDEGGGRPKETPQAGAAWPPCLRNEVNSLDDTKTKDLPRQLCLAVGVPIVVHKSPQHVLLGVCSNRDGIVRAIELDQREQIQNHDG-GYRVVHLKHLPVRVFVHIESMDDSGLKLPGFPRGVVAFGPIERNVVLTGKNGRNFTIKRRQLPLTSGCLSSVR---------VILDLRKPPGPRVDPASLYVARSRAKSLNDTYLLFPVTLNDLSRPRDADVVALIDCLRRLAKDTLNAFTSDPSTFIPSATSLP----------TDSDYDSGENDGGRGSGWLGGASRRRQLQPAHLMPNSANNCFFNSAIALCLAVFDGHTPPNFSDCTPAATAFCPAIRLVKDNMLSGAPMPEHI 1617          
BLAST of mRNA_P-littoralis_Contig1065.2.2 vs. uniprot
Match: A0A6H5KXW4_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXW4_9PHAE)

HSP 1 Score: 707 bits (1825), Expect = 6.650e-227
Identity = 411/768 (53.52%), Postives = 504/768 (65.62%), Query Frame = 3
Query: 3525 MVNIMRDFPRADTQPVAHARLLLCMFVPFFELDDLK-----------------------------LDGMLAQRLAADEETAKRKAEAAVMTERRDPTSTETEGEVLVGDYQNDDDD-INVMPATVQRLKTLLFVTDALRSFTKAGFSKDNSAPTSASSLLSGRTLDDAAGDVSKVVPGATASWAKVAMTRQQSSLEKMTSNHVSSLADADAEH-PAPSTAQSRTRDPAPLAPYLMQIRNAAHAGLSDSARLQRCAKRDATNEAVAKTDVGASAASQYPVAFSIAQEFGLNRKQRLAFYIFANGLLAQHRPDPPEALRLYIGGGAGTGKSHVLKAMKAFIDCPAIAGQIPPGRLLTVAFQGKMASAVGGRTAHSTCSSDGARDGSLSGDHDDQTSLNESKALAWKNVTTLAIEEVSMIGYKLLVSLHKAACSMFPLHKGK-PFGNRLVVMLGDFNQLSPVKAKSLAFGAGNAANRRDMNVTERFGADLFRSANASVMLDEDNSRFSPTYAPVMERKLLGENNADDVRLLNSRLLTGSPGLHADNCFHGRVIAFRNRVNTILTVPMMRTWCMANGTPLFLAAASDVYITHLLPGFLKQKIPPGATWPAGLRDEVNSIGDASANDLPTVACLAVGAPVVVHMSPQFVLLGVCNNSDGVIHSIELDQREDYLVHSTPGYSVVNLRYPPVRVLVYIKSADEAGLWLDGLPRGVVAFAPVEKPFTVVGIGKKKFTIRRRQVPLTAGCLSSMYRSQGQTMRTITLDISNPPGNRM 5732
            M NIM+D PR+DTQPVAHARLL+C+FVPFF LDDLK                             + GMLAQ+LAA EETAKR AE  +++E+         G+VL+  Y  +D+   +V+PATV+R+ T LFV DA R+F  AGF+ D S   ++S LLSGR+++D   D+S V  G     A  +M+RQ++               +D+   PA S++     +  PL P +M++R A+  GLS  A   R  +RD TN  VA TD+GA AA Q+  AF+IAQEFGLNRKQR AFYIFANGLL+Q RPDPP ALRLYIGGGAGTGK+HVL+A++AF+D P +   +P  RLL VAFQGK A+AVGG T HS C + G   G LSG H+ Q++L  S+A  W+    LAIEE SMI   LLV LH  ACSMFPLHKG+ PFGNR+VVMLGDFNQL P+KA+SLA        R  M VTER+G+DLFR ANA VMLDE N RFSPTYAPVMER L  +   DDVRLLN+ ++  S   +A + F   +I FRN+   + T    RT            A S +   HL   F  QK    A WP GLR+E+NS+ DA+  DLPT+A LAVGAPVVVH  PQFVLLGVCNNSDG+I  IELD  ED+L+  TPGYSVVNLRY P++V VYIK+AD+AGL L+GL RGVVA APVEK  T+ GIGK KF  +RRQ+PL AGC+SS++RSQGQTM  I LDI  PPG  M
Sbjct:    1 MANIMKDVPRSDTQPVAHARLLICLFVPFFTLDDLKRADETWPDALRRADDKNRWDPGTYPFRLNIQGMLAQKLAAAEETAKRHAERQLLSEKTHALGDNMAGDVLLDSYGGEDEPGESVIPATVRRMLTDLFVNDAFRTFVAAGFNGDGSTRDASSPLLSGRSMEDTCLDISFVRGGTDLEAATASMSRQENXXXXXXXXXXXXXXGSDSNRTPAASSSSFGVPNEDPLGPCIMELRKASQDGLSPEACRARDERRDRTNAEVAGTDIGAVAALQHVAAFTIAQEFGLNRKQRQAFYIFANGLLSQFRPDPPPALRLYIGGGAGTGKTHVLRAIRAFVDSPPVKRLLPRARLLCVAFQGKQAAAVGGTTVHSVCPNTGDSYGCLSGAHEGQSTLPASEAAHWQRDVILAIEESSMISCNLLVRLHNTACSMFPLHKGQQPFGNRVVVMLGDFNQLRPIKARSLAHLTALQERRLGMTVTERYGSDLFRMANACVMLDESN-RFSPTYAPVMERCLYSKCTEDDVRLLNTCVMGASTTRNATSAFDASIITFRNKEYALAT----RT-----------NAPSPIPFLHL---FFPQKPATNAPWPTGLREEINSLDDANTKDLPTLAFLAVGAPVVVHKRPQFVLLGVCNNSDGIIRGIELDPLEDFLLDPTPGYSVVNLRYAPLQVFVYIKTADDAGLHLEGLDRGVVAIAPVEKECTIEGIGKGKFIFKRRQLPLPAGCVSSVFRSQGQTMPKIILDIHPPPGTAM 749          
BLAST of mRNA_P-littoralis_Contig1065.2.2 vs. uniprot
Match: D7G2I1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2I1_ECTSI)

HSP 1 Score: 532 bits (1371), Expect = 2.860e-167
Identity = 278/437 (63.62%), Postives = 332/437 (75.97%), Query Frame = 3
Query: 4914 MLDEDNSRFSPTYAPVMERKLLGENNADDVRLLNSRLLTGSPGLHADNCFHGRVIAFRNRVNTILTVPMMRTWCMANGTPLFLAAASDVYITHLLPGFLKQKIPPGATWPAGLRDEVNSIGDASANDLPTVACLAVGAPVVVHMSPQFVLLGVCNNSDGVIHSIELDQREDYLVHSTPGYSVVNLRYPPVRVLVYIKSADEAGLWLDGLPRGVVAFAPVEKPFTVVGIGKKKFTIRRRQVPLTAGCLSSMYRSQGQTMRTITLDISNPPGNRMDPAAVYVALSRATCLDDIYLLFPVTLENLNKPRNKDVVALIEYLQRLDKATLSAFLQDPTRFTPASASLAALAEVGPRALTKKQQRKGVNRHGRGATRRTAHLLPNSDNNCFLNSSLALALAAWNAQQLLDTSALTPAGAAFIALVQLLRDSMFNGCELPQDIL 6224
            MLDE N RF+P YAP+MER L  E  +DDV L+N+ ++  S    AD+ F  RVIAFRN+VNT+LTVPMMRTWC A GT LF+AAA DVY+ H  PG   +  P  A WPAGLR E+ S+ D   NDLPT ACLA+GAPVV+H SPQFVLLGVCNNSDG+I  IELD RE Y   ST GYSVV LRY P+R+ VYIKSAD AGL LDGL RGV+A APVE+ FT+VGI K+KFT +RRQ+PLTAGCLSS+YRSQGQTM  I LDI  PPG+ +D AAVYVALSRAT L D+ LLFPVTL++LN+P+N D+VA++ YL RLD+ T+  FL+DP  FTPA A+L  + E GPR   K+ +R  V RHG GATRR AHL+PN DNNCF NS+LALALAAW+ Q L DT+A TPA  +F A +QLLRDSMF+ C+L  +I+
Sbjct:    1 MLDESN-RFTPIYAPIMERCLRSECISDDVDLINNHVMGTSR--KADSLFDARVIAFRNKVNTVLTVPMMRTWCKAKGTTLFIAAAHDVYVGHQRPGATAEVPPTDAPWPAGLRREIKSLDDGKTNDLPTSACLAIGAPVVLHKSPQFVLLGVCNNSDGIIRGIELDPREGY-ASSTAGYSVVTLRYAPLRIFVYIKSADAAGLHLDGLQRGVIAVAPVERKFTIVGINKRKFTFKRRQIPLTAGCLSSVYRSQGQTMPKIILDIRRPPGHAVDCAAVYVALSRATGLGDLNLLFPVTLQDLNQPQNPDIVAIVNYLHRLDETTMVLFLKDPGSFTPAYATLDGIEEAGPRPPHKQPKR--VGRHGPGATRRVAHLIPNEDNNCFFNSALALALAAWDGQPLPDTTAGTPAAGSFFAALQLLRDSMFDECDLSPNIV 431          
BLAST of mRNA_P-littoralis_Contig1065.2.2 vs. uniprot
Match: A0A6H5JT57_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT57_9PHAE)

HSP 1 Score: 530 bits (1364), Expect = 6.740e-157
Identity = 406/1109 (36.61%), Postives = 545/1109 (49.14%), Query Frame = 3
Query: 2667 FAIRSNMDLKILLRDSDANWLLFYILNYSTKTEQTLDVLLPLLAPVTERIREESDGAADKELAVRLVGSCLCKQLSSLSIGGPAAASKVFDLPDDKISHATINCSMEPLLTWAT-SRDG--PLDGEADQGDERTTGDDDGXXXXXXXXSVLITAFKGKLTVAQRAYFFYLNRCHPDDTTHPVHGMSYVVWHKLVRVERCLPGREKPTKAASRVEPESDDSDDXXXXXXXXXXLGTSDSDDFGEDTSHPVSATSRPSSRGRPRRDRFPVLGEFKNKWQQGRLPVMREKSAMVNIMRDFPRADTQPVAHARLLLCMFVPFFELDDLKLD------------------------------GMLAQRLAADEETAKRKAEAAVMTERRDPTST----ETEGEVLVGDYQNDDD-DINVMPATVQRLKTLLFVTDALRSFTKAGFSKDNSAPTSASSLLSGRTLDDAAGDVSKVVPGATASWAKVAMTRQQSSLEKMTSNHVSSLADADAEHPAPSTAQSRTRDPAPLAPYLMQIRNAAHAGLSDSARLQRCAKRDATNEAVAKTDVGASAASQYPVAFSIAQEFGLNRKQRLAFYIFANGLLAQHRPDPPEALRLYIGGGAGTGKSHVLKAMKAFIDCPAIAGQIPPGRLLTVAFQGKMASAVGGRTAHSTC-----SSDGARDGSLSGDHDDQTSLNESKALAWKNVTTLAIEEVSMIGYKLLVSLHKAACSMFPLHKGKPFGNRLVVMLGDFNQLSPVKAKSLAFGAGNAANRRDMNVTERFGADLFRSANASVMLDEDNSRFSPTYAPVMERKLLGENNADDVRLLNSRLLTGSPGLHADNCFHGRVIAFRNRVNTILTVPMMRTWCMANGTPLFLAAASDVYITHLLPGFLKQKIPPGATWPAGLRDEVNSIGDASANDLPTVACLAVGAPVVVHMSPQFVLLGVCNNSDGVIHSIELDQREDYLVHSTPGYSVVNLRYPPVRVLVYIKSADEAGLWLDGLPRGVVAFAPVEKPFTVVGIGKKKFTIRRRQVPLTAGCLSSMYRSQ----------------------------GQTMRTITLDISNPPGNRMDPAAVYVALSRATCLD 5780
            F  RSNMD+K LLRDSDA   LFYILNYSTKTE T+D LL +LAPV ERI++E++GA     A +LV +C CK ++ + +G PAAASKV    D K +     C M+PLL  A+ S D   P +G  +  D         XXX     ++L T+  GK+ ++   +  YL RC P+DT HP HGM Y VW +LVR+E   P ++KP +  +      DD+D    XXXXXXX                  A  R   RGRP   R   +G      QQ    V RE+  ++NIMRD P+ DTQP  HA+LLLC++ PFF++ DL+L                               GML QR AADEE   R +       RR P       + +G++   D  + D    NVMP      +   +V +A+     AGFS+ ++     ++LLSGR+    A D SK                   +L K      ++    D    AP  A ++  +   L+PYL  +R+ + AGLS  A+ +   +R  TNEAVAKTDVG S+  Q+     IA EFGLNRKQRLAF+IF    +A+     P ALRL++ GGAG+GKS+VL+A+ A IDCPA+ G + PG LLTVAFQGK A+ VGG T HS       ++DGA D ++      QT L+E+KA  W +   LAIEEVSM+    L SLHKAA S+ P     PF   + V  GD NQL+PV AKS+ FGA +++    M  TER G   F +ANA+V+LDE N+RFS TYAPVM+R L   +   DV   N+R L GS     D               T+  + M   W                                                                      M+          +    I SI+LD RE  +     GY VV+L +PPVRV+++I++A +AGL L  L RG VA     + F V G+  KK++ +R Q+PL  G LSS+YR+Q                            G+T++T+ L ++ P    MDP+A YVALSRAT  +
Sbjct:  224 FCTRSNMDIKALLRDSDARGALFYILNYSTKTETTMDALLNVLAPVVERIKDEAEGAPAAVTAAQLVRACSCKTVAHMPVGAPAAASKVLGYTDAKSAPDARTCPMKPLLALASASFDALPPAEGSNENADXXXXXXXXXXXXDYHSGAILNTS-GGKIRISISLHELYLRRCLPNDTEHPYHGMCYAVWARLVRIENT-PRKQKPARRPN------DDNDRESGXXXXXXXXXX-----------XXXXAARR--KRGRPLAKRHDFVGLPTVHKQQ----VTREEPILINIMRDVPKQDTQPENHAQLLLCLYKPFFKIHDLRLPDEASWAVALRRTEESGLWDQRSTSMRINIKGMLRQRHAADEEN--RASSVLQSLRRRRPLGACGGADIDGDIFGADVDDTDPAGPNVMPPARNAHRVSAYVNNAVDRCLDAGFSRTDNDRLPQAALLSGRSSHQIAADASK------------------DALLKTRETEAATAVPDD----APDVAATKPYNADALSPYLRDLRSKSEAGLSKDAKDRMDRRRKETNEAVAKTDVGRSSPQQHDAVRRIADEFGLNRKQRLAFFIFGAAWIARDGVPTPNALRLHVSGGAGSGKSYVLRAIVALIDCPALKGVVQPGGLLTVAFQGKAAANVGGNTVHSVADVPRKNNDGAMDNTIG-----QTGLSEAKAARWTHAAALAIEEVSMVSCLQLGSLHKAAVSVRPSSASLPFAGMIYVTFGDLNQLAPVSAKSVVFGATDSSELHKMTHTERIGHSNFWAANAAVVLDETNNRFSATYAPVMDRVLRRVSTVTDVEAFNARTL-GSFSRLPDG--------------TLAKLSMKHCW----------------------------------------------------------------------MAQTITFRNKATSEKATIVSIDLDPREAIVDGEPEGYRVVHLVHPPVRVVIFIQTAYDAGLHLPSLNRGEVAVGVESRSFDVRGLHDKKYSFKRGQLPLLPGHLSSVYRAQHFIHAYMHTSVLPQLVSFCLSSCYLSSKGETIKTLLLHMTKPVDGVMDPSAAYVALSRATSFE 1193          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1065.2.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L0L4_9PHAE0.000e+073.52Helitron_like_N domain-containing protein n=1 Tax=... [more]
D7G3U9_ECTSI0.000e+062.75ATP-dependent DNA helicase n=2 Tax=Ectocarpus sili... [more]
A0A6H5K8N9_9PHAE0.000e+074.38Helitron_like_N domain-containing protein n=1 Tax=... [more]
A0A6H5KIB1_9PHAE0.000e+047.61ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5JN07_9PHAE1.390e-24542.58ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5KTA2_9PHAE2.500e-24150.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K882_9PHAE4.930e-23140.79ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5KXW4_9PHAE6.650e-22753.52ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
D7G2I1_ECTSI2.860e-16763.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JT57_9PHAE6.740e-15736.61ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1065contigP-littoralis_Contig1065:3176..11205 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FSK0
PFAMsHelitron_like_N,PIF1
Model size7000
Max annot lvl2759|Eukaryota
KEGG koko:K15255,ko:K20647
Hectar predicted targeting categoryother localisation
Exons9
Evalue1.45e-268
EggNOG OGsCOG0507@1|root,KOG0987@2759|Eukaryota
EC3.6.4.12
DescriptionG-quadruplex DNA unwinding
Cds size1908
COG categoryL
BRITEko00000,ko01000,ko03029,ko03032,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1065.2.2prot_P-littoralis_Contig1065.2.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1065 3305..5284 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789396.717315-UTR-P-littoralis_Contig1065:3175..33041680789396.717315-UTR-P-littoralis_Contig1065:3175..3304Pylaiella littoralis U1_48UTRP-littoralis_Contig1065 3176..3304 +
1680789396.7490935-UTR-P-littoralis_Contig1065:5284..58051680789396.7490935-UTR-P-littoralis_Contig1065:5284..5805Pylaiella littoralis U1_48UTRP-littoralis_Contig1065 5285..5805 +
1680789396.765895-UTR-P-littoralis_Contig1065:6121..70661680789396.765895-UTR-P-littoralis_Contig1065:6121..7066Pylaiella littoralis U1_48UTRP-littoralis_Contig1065 6122..7066 +
1680789396.7783275-UTR-P-littoralis_Contig1065:7156..72921680789396.7783275-UTR-P-littoralis_Contig1065:7156..7292Pylaiella littoralis U1_48UTRP-littoralis_Contig1065 7157..7292 +
1680789396.7899222-UTR-P-littoralis_Contig1065:7379..85381680789396.7899222-UTR-P-littoralis_Contig1065:7379..8538Pylaiella littoralis U1_48UTRP-littoralis_Contig1065 7380..8538 +
1680789396.8027647-UTR-P-littoralis_Contig1065:8671..89661680789396.8027647-UTR-P-littoralis_Contig1065:8671..8966Pylaiella littoralis U1_48UTRP-littoralis_Contig1065 8672..8966 +
1680789396.811166-UTR-P-littoralis_Contig1065:9062..91851680789396.811166-UTR-P-littoralis_Contig1065:9062..9185Pylaiella littoralis U1_48UTRP-littoralis_Contig1065 9063..9185 +
1680789396.8214386-UTR-P-littoralis_Contig1065:9281..102891680789396.8214386-UTR-P-littoralis_Contig1065:9281..10289Pylaiella littoralis U1_48UTRP-littoralis_Contig1065 9282..10289 +
1680789396.8365295-UTR-P-littoralis_Contig1065:10429..112051680789396.8365295-UTR-P-littoralis_Contig1065:10429..11205Pylaiella littoralis U1_48UTRP-littoralis_Contig1065 10430..11205 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789396.7300494-CDS-P-littoralis_Contig1065:3304..34181680789396.7300494-CDS-P-littoralis_Contig1065:3304..3418Pylaiella littoralis U1_48CDSP-littoralis_Contig1065 3305..3418 +
1680789396.7388897-CDS-P-littoralis_Contig1065:3490..52841680789396.7388897-CDS-P-littoralis_Contig1065:3490..5284Pylaiella littoralis U1_48CDSP-littoralis_Contig1065 3491..5284 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1065.2.2

>prot_P-littoralis_Contig1065.2.2 ID=prot_P-littoralis_Contig1065.2.2|Name=mRNA_P-littoralis_Contig1065.2.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=636bp
MLDDILHPSVMHKCLSDFDSFMVNSIRRCESNARCTLSTSCAVCDRYCRE
KDYKLVSVNDLPQKHLLLANDSLLNCAAVKHEFFNYPGDDGNILDGHVVA
RQGFETDGRLRVCVECLNSLLKDKMPETALANGLWLGDFPEHLRSATFVE
MVAASPVRISGMVLALDELRVGNIGGSARSLMRGTFTFYMQDAYGVQLRL
PACDTDIAGSFTCALVGAKPSVAQLRKLFGARRKMVEDLLAFQLDASNDL
VGVHELAREAQLSKDNLDTYNEDGSIPQAILDAMIPVKDTTNAYANAHST
HAHGNREPETVDHRGDAEGGGHGPVDTATTPPFIIEANAIMPSGDDLAVS
SHAKPGRLRTLGSSLKSPHRGRPSGASATASLAQLAAAQAREARGQAPDG
TDNALVVTHSGRMVSDVTNPGLFVGAYFDLFPHGVGGHLDKRPRPLDLKK
WAQIFLWRRDPGFRKNRTSLYCVCSLIFRREAISNARWKLSGRVSRGMAA
DIASVTAQDLRAVASEMETGSSGFSALADRPGIRALIKSMESVHAGASWT
IYNKRSTRMIAISFILQMGQPLFWLTINPADVNSPIVMILAGVELDVTRR
LKRGFPVYADKLRLVANDPVASAEFFHATIDAVLT*
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mRNA from alignment at P-littoralis_Contig1065:3176..11205+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1065.2.2 ID=mRNA_P-littoralis_Contig1065.2.2|Name=mRNA_P-littoralis_Contig1065.2.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=8030bp|location=Sequence derived from alignment at P-littoralis_Contig1065:3176..11205+ (Pylaiella littoralis U1_48)
AGGCAAGCAGAACGCTTCGGCCAACAACATGACGCCGGCCTTTTGCCTTT TGCTCCTATCATCAAGGAGCGTCCGGTCTTAGCCTTCGACCACGGCCAAG GAAGGATCGACGGACACGATAAGCCACACATGCTCGACGACATTCTGCAT CCTTCCGTCATGCACAAGTGCCTCTCAGATTTCGACAGCTTCATGGTCAA CTCCATCCGCAGGTGCGAGTCCAACGCGCGCTGTACACTCTCAGTACTTT TACTTACTTCACTCCAAATTATATTGTGCGGCTTACTTACATGACACAAT TTCTGCGACCGCAAGACTTCGTGTGCGGTGTGCGACCGGTACTGCAGGGA AAAGGACTACAAGCTAGTCAGCGTCAACGATTTGCCTCAGAAACACTTGC TCCTCGCCAACGACAGCCTCTTGAACTGTGCGGCGGTGAAGCACGAGTTC TTCAACTACCCCGGTGACGACGGCAATATCCTAGATGGGCATGTGGTGGC ACGGCAGGGATTCGAGACCGACGGTCGCCTGCGTGTTTGTGTCGAGTGCC TCAACAGTCTCCTCAAAGACAAGATGCCGGAGACTGCTTTGGCTAACGGG CTGTGGCTTGGCGATTTCCCGGAGCATTTGCGTTCTGCCACTTTCGTCGA GATGGTCGCTGCGAGTCCGGTAAGGATAAGCGGCATGGTCTTGGCTTTGG ATGAGTTGCGGGTTGGCAACATTGGTGGTTCCGCCAGGAGTCTAATGCGA GGTACTTTTACGTTCTACATGCAAGATGCATACGGAGTGCAGTTGCGGCT CCCGGCTTGCGACACCGATATTGCCGGATCATTTACGTGCGCTCTTGTGG GGGCAAAGCCAAGCGTGGCGCAGCTGCGAAAGTTGTTTGGTGCCAGGCGT AAAATGGTTGAAGACCTGCTTGCCTTTCAGCTGGACGCCAGTAACGACTT GGTAGGCGTACACGAGCTGGCGCGGGAGGCACAGCTTTCGAAGGATAACC TTGACACATACAATGAGGACGGCTCCATACCTCAAGCGATTTTGGACGCA ATGATTCCTGTTAAGGACACTACGAACGCCTATGCCAACGCACACTCCAC CCATGCACATGGCAACCGTGAGCCGGAAACCGTTGACCACCGCGGAGACG CCGAAGGCGGTGGTCATGGTCCCGTTGATACGGCAACCACACCTCCGTTC ATCATCGAGGCAAACGCCATCATGCCGTCCGGGGATGATCTCGCCGTGTC CAGCCATGCCAAACCCGGTCGTCTGCGAACCCTGGGCTCTTCTTTGAAGT CACCGCATCGTGGACGCCCTTCGGGAGCATCTGCTACCGCTTCTCTGGCG CAACTGGCGGCAGCCCAAGCCCGTGAAGCTCGTGGTCAGGCTCCTGATGG AACGGACAACGCCTTGGTCGTCACCCACTCTGGCCGAATGGTGTCGGACG TCACCAACCCTGGGCTGTTCGTCGGAGCCTACTTCGACCTGTTCCCGCAC GGCGTAGGGGGGCATTTGGACAAACGCCCAAGGCCTTTGGATCTGAAGAA GTGGGCTCAGATTTTTCTATGGAGACGCGACCCTGGCTTCCGCAAGAACC GTACCTCCCTGTATTGCGTGTGCTCGTTGATCTTTCGGCGGGAGGCCATA TCAAATGCCCGGTGGAAGCTCAGCGGGCGAGTGTCGAGGGGTATGGCAGC CGACATCGCCAGCGTCACCGCCCAAGACCTCAGAGCGGTTGCATCGGAAA TGGAAACGGGTTCCAGCGGCTTTTCTGCTCTGGCCGATCGTCCAGGAATT CGTGCACTGATCAAAAGTATGGAATCCGTTCACGCGGGAGCATCGTGGAC CATTTACAACAAGAGGTCCACCAGAATGATCGCAATATCGTTCATTTTGC AGATGGGACAGCCGCTGTTCTGGTTGACGATCAACCCCGCGGACGTAAAC AGCCCGATCGTCATGATCCTGGCTGGTGTGGAGCTCGACGTCACCCGCCG CCTGAAACGCGGCTTCCCAGTCTATGCCGACAAGTTGAGGTTGGTCGCAA ACGACCCTGTGGCATCTGCAGAGTTTTTCCACGCTACCATCGACGCCGTT TTGACCTGACTGCTTCGTTTCGGAGCTTGTGACGGTGATGGCGGAGTGTT GGGCCGTGTTAAAGGCTATGTTGGTATGACCGAGGAGCAAAAACGTCTCA CACTACACTGCCACCTGCTGGTTTGGGTTTTCGGATACAACGACTTTGCT TCCTTCCGCGATCTCATGGACAAAACTCCGACGAGGTACAGAGAATTGGC GCAGTGCTTGGACAGGGTAATTTTCAACCAAATTGCCACTCTGAGCGACA TCAATCACGTCATGCGTGGCGTTCAACATGCCACTTCGTCTGGAGTGGAG AGCGACGACGCCATCCCGCCGGCGGATCCGCTGGTCCGTGACGCAAAGGA ATGTATGGCGACTCCACCCCCACCTTCGTGTTTCCCACGTGGTGGCGAAC CCCGGAACAATCTCGACGACGACACCTACGGCCGCGTCATATACCTTGAT TTGGCTGGCGTCACCCGTGGAGCTAGCTTGCACAAGTGCCAAGCGACTTG CCGCAAGTACAACCATGCCGACTCCTGCAGGTGATTGGTTTGAAACGCTG TAGACGTTGCTGCTTTATTGGCTTTCGTTTGAAACGTTGTACATGCATCC CGTAATATCCAGCTGCCTTAGTTAGTGTCCATGACCCCATCTTGGCGCAC CGTCTTGTTGTAACAGGTTTGGGTTTGGTGAAGCAGGCAAGCCACTCGTG GAAGAGACCGTTGTACACCGCGGGCGTTGTATTTTCGACACCAAGGGAAA CATGACCATCAATAGTATCGAATATTCTTGGAGCTCCGCGAGTGACGCCA TTGCTGCCGCATCCAACGAAGTTTTTCGAACAGCTTTTAACGAAAGCATC GAAAAACTTGTCGGCGACGATGGGCTTCCTGATCCCTTGTCGGACCGTTT CACGGCGGAACTTCGTCGACTGCACAGCCACATCAACAGCTTTAACCCAG TCAGTTCGCCATTCGGAGTAACATGGACCTCAAGATTCTTCTGAGGGACA GCGACGCCAATTGGCTTTTGTTCTACATCCTCAACTACAGCACCAAAACG GAGCAGACTTTGGATGTGTTACTGCCTCTTCTTGCACCGGTTACCGAACG GATCAGAGAAGAGAGCGACGGGGCCGCGGACAAGGAGCTCGCTGTGAGGC TAGTGGGGTCATGCCTGTGTAAGCAGTTGTCCAGCCTGAGTATCGGTGGC CCAGCAGCAGCAAGCAAAGTCTTCGACTTGCCGGACGACAAGATCTCCCA CGCAACTATCAACTGCTCCATGGAACCGCTGTTGACGTGGGCCACTTCTA GGGATGGCCCGCTGGACGGCGAGGCCGATCAGGGCGACGAGCGCACAACC GGAGACGACGACGGCGACGACGGCGACGACAACGACGACAGCGTCCTCAT CACGGCTTTCAAAGGCAAACTGACTGTCGCCCAACGTGCCTACTTCTTTT ACCTCAACCGATGTCACCCAGACGACACGACCCACCCTGTGCACGGCATG TCTTATGTCGTATGGCACAAGCTGGTCCGGGTCGAGCGATGCCTGCCAGG CCGCGAGAAACCAACGAAAGCTGCTTCTCGCGTGGAACCCGAATCCGACG ACAGCGACGACGACAACAGCGACGACCGCAACAGCGATGACCTTGGCACG TCGGATTCAGACGATTTTGGCGAAGACACATCACACCCAGTATCGGCAAC CTCACGTCCAAGCTCGCGGGGCCGTCCGCGACGGGACCGTTTTCCTGTTC TAGGGGAGTTCAAGAACAAGTGGCAGCAGGGGCGTCTCCCTGTAACCACA TTTCTAGCTATTTTTGTGTATATAGAACATTTTACCAAGTCGACTATTAA CCTTGTCCACACTGCTCGACTTCATCCCCAGGTAATGAGAGAAAAGTCCG CCATGGTCAACATCATGCGTGACTTCCCAAGGGCAGACACACAGCCAGTT GCTCACGCTAGGCTGCTGCTGTGTATGTTCGTTCCGTTCTTCGAGCTTGA CGATCTGAAACTCGACGGTGAGTCATGGCCACAGGCGATGGGTAGAGTGG GAGCTTCGAGTTCTTGGGATCCGTTCAGCAATCCGATGCGGCTCAACATT AGAGGGATGCTTGCGCAACGACTCGCGGCCGACGAGGAAACCGCCAAGCG GAAAGCAGAAGCGGCAGTTATGACCGAACGTAGAGACCCCACGAGTACTG AGACAGAAGGGGAGGTCCTCGTGGGAGACTACCAAAACGATGACGACGAC ATCAACGTCATGCCGGCTACTGTCCAACGCTTGAAAACTCTGCTTTTCGT CACGGACGCACTACGATCTTTCACCAAGGCTGGTTTCAGTAAAGACAACT CTGCCCCAACATCTGCATCTTCATTGCTAAGCGGGAGGACGCTGGATGAC GCCGCAGGAGACGTTTCTAAGGTTGTTCCCGGTGCCACTGCTTCTTGGGC GAAAGTGGCCATGACTCGTCAACAATCCTCTCTCGAGAAAATGACTAGCA ATCACGTGTCATCTTTGGCGGACGCTGACGCCGAACATCCGGCACCATCA ACCGCACAATCACGTACGCGCGATCCTGCGCCTCTCGCGCCGTACCTCAT GCAAATAAGAAATGCTGCGCACGCCGGGTTATCGGACAGCGCCCGCCTTC AACGCTGCGCCAAGCGTGATGCCACCAACGAAGCCGTCGCCAAGACAGAC GTCGGAGCCAGCGCAGCATCACAATATCCCGTTGCCTTCAGCATCGCACA GGAATTTGGCCTCAACCGAAAGCAGCGACTAGCTTTTTACATCTTCGCCA ACGGTCTCCTGGCTCAGCACCGCCCAGACCCTCCTGAAGCACTTCGGCTT TACATCGGTGGCGGAGCCGGGACAGGAAAGTCGCACGTGCTCAAGGCCAT GAAAGCTTTCATCGACTGTCCGGCTATTGCTGGCCAAATCCCACCAGGTC GTCTATTGACCGTTGCATTTCAAGGGAAAATGGCCTCGGCTGTGGGAGGA CGAACTGCACACTCCACTTGCTCCAGCGACGGAGCACGCGACGGCAGCTT ATCCGGCGACCACGATGATCAAACTTCGCTTAACGAGAGCAAAGCACTAG CGTGGAAGAACGTCACCACCCTGGCTATTGAAGAGGTCAGCATGATCGGC TACAAACTTTTAGTTAGTCTTCACAAGGCCGCGTGCTCCATGTTCCCGCT TCACAAGGGGAAACCTTTCGGCAACCGTCTTGTCGTCATGCTCGGTGACT TCAACCAACTGAGGTGAGGGGTATGTACATGTGTCGCACATTACAGTACG TATGTAATAATATTTCTTCATACTGGCGATAACTGTATATCCAGCCTAAA ACTTTAACACGCTCCTCTTTTGCCATGGCTGTACGTTGATCTCTAGTCCT GTCAAAGCCAAATCCTTGGCTTTTGGAGCTGGTAACGCGGCAAACCGGAG GGACATGAATGTGACTGAGCGGTTCGGCGCGGACTTATTCCGCAGTGCCA ACGCGAGTGTTATGTTGGACGAAGACAACAGCCGTTTCAGCCCGACCTAC GCGCCGGTGATGGAGAGGAAGCTTCTCGGTGAAAACAACGCCGACGATGT TCGACTACTAAATAGCCGACTGCTAACCGGGTCTCCTGGTCTACACGCCG ACAACTGCTTCCACGGGCGTGTCATCGCCTTCCGAAACAGGGTACGTGTT GTTCGGGTAAATATTATTGTTCAAACGCACTTACAGAGTTAAATCGTCAT TTCACATATTTTTGTTACTCCGATCCTCACCCTTCAGGTGAACACAATCC TGACGGTTCCGATGATGCGCACCTGGTGCATGGCGAACGGAACTCCGCTG TTCCTTGCAGCAGCGTCCGACGTCTACATCACTCATCTCTTGCCGGGCTT TCTGAAACAGGTAAAGTGCATCTTCGTTCACAGAATTGGACATGTACCCA ATGGCATTTTGTCAACTGTACTAAAAGCCGTCCGGTCATACTCTATTCCG ACACAGAAAATCCCTCCTGGCGCCACGTGGCCGGCTGGGCTTCGCGACGA GGTCAACTCCATCGGCGACGCATCCGCCAACGATTTGCCAACGGTGGCAT GCCTTGCTGTTGGCGCGCCGGTAGTTGTCCACATGAGTCCGCAATTCGTC CTCCTGGGAGTGTGCAACAACTCCGACGGTGTCATCCACAGCATCGAGCT GGACCAACGTGAAGACTATCTCGTCCACAGCACCCCGGGTTACTCCGTCG TCAACCTTCGATACCCACCAGTCAGAGTTCTTGTCTACATCAAGTCTGCG GATGAAGCTGGTTTGTGGCTGGATGGGTTGCCACGCGGGGTGGTCGCTTT TGCCCCGGTCGAGAAACCGTTCACAGTGGTCGGCATCGGCAAGAAAAAGT TTACTATCCGCCGACGGCAAGTGCCGCTAACTGCCGGGTGTTTGTCGTCT ATGTATCGCAGCCAGGGACAAACCATGCGCACCATCACCCTTGATATCAG TAACCCACCAGGAAACAGGATGGACCCCGCCGCCGTTTACGTCGCTCTAT CTCGCGCCACGTGTCTCGATGACATATATCTGCTTTTCCCCGTAACGTTG GAGAACCTCAACAAACCACGAAACAAGGACGTCGTGGCTCTCATCGAATA CCTCCAACGCCTCGACAAAGCTACCCTTTCAGCGTTCCTCCAAGATCCAA CGCGGTTCACGCCGGCCTCAGCCTCACTGGCTGCTCTTGCCGAAGTCGGG CCGCGAGCGCTCACCAAGAAACAACAGAGGAAAGGGGTCAACCGCCATGG CCGTGGTGCCACTCGGAGGACTGCACACTTGCTGCCGAACAGCGACAACA ACTGCTTCCTCAACTCTTCTCTTGCTTTGGCGCTTGCGGCATGGAATGCT CAACAGCTGCTAGACACATCCGCGTTAACTCCAGCCGGCGCCGCGTTCAT CGCTTTGGTTCAACTTCTTCGGGACTCCATGTTCAACGGCTGCGAATTGC CTCAAGATATCTTGGTATGCCACCCTAGTTTCAAAGTACTGCGTGTAGTT GGCCGTTGTTCGCGTCGATTTCACCACAACCTTCTCAACTTTCGTCGTCG ACGTTCAGTACGCCGCAAATCAACTATGTCCCCATGTTTTCTGTTTCACG CCAGGTTGCAGCACAGCATGCACGTTACGCCATCTTCATCAATTCGGGAC TGCCTGGCCTCGGTTCTGAAATGGGTGCGGTGGCGAGCGTGTACGAGGCC ATCGCGAAACGTTGCCCCCAAGTCTCTCAAGCCTGGCCTGCCAACGTCAA CCTCCAGCACCAACTCGTAGTCACACGCGTATGATATTTGGGCTTGACTG GAGATACTCCAACGACTGCACCATCGCCAACCACAGCAACCTCAACATCA CGGCCGACCATTCGGCTAGGTTAAGGGACGCCACCGTCATCACGGTGCCG AATGGTCACTCCGAGTCATTCCAAGAGAAGGTAGCAGAATTCTTCCACTC CGGTGAAGCTTCTGATCTTGCGATCCCATGACAATCACCATGCCCTTACT GCGCAGAAACCATCACCTTTCACACGTGCACGTGGACGTTGCTTCCTTGG ACTGGAGATACGGCACCGGACAGGTTGTTTTTTAGGTCTTCGCAAGTCTT CTAGGGCGGTGATGACTTGCCCATGTCACCCTTATTGACTTTAACTTTGG GGGCGGAATTCTCCCTCTTTGGGGTTTCTTATCATCTTCCTCTTGGCGGC GGCTGCCGGAACCACTTCGTCACTCAAATGAGAGCGAGGGGTCGATGGCA CAAGTACGACTGCCTACAAGGCGGCCTCACAACCTCTTCTGACGACTTTG ACCCTACCTGGCACGAGTCATACCCCTACATGCTGGTCTACCTGCGGAAT TCCATGTGCATCGCCACACCGCCGGCATAC
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Coding sequence (CDS) from alignment at P-littoralis_Contig1065:3176..11205+

>mRNA_P-littoralis_Contig1065.2.2 ID=mRNA_P-littoralis_Contig1065.2.2|Name=mRNA_P-littoralis_Contig1065.2.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1908bp|location=Sequence derived from alignment at P-littoralis_Contig1065:3176..11205+ (Pylaiella littoralis U1_48)
ATGCTCGACGACATTCTGCATCCTTCCGTCATGCACAAGTGCCTCTCAGA
TTTCGACAGCTTCATGGTCAACTCCATCCGCAGGTGCGAGTCCAACGCGC
GCTGTACACTCTCAACTTCGTGTGCGGTGTGCGACCGGTACTGCAGGGAA
AAGGACTACAAGCTAGTCAGCGTCAACGATTTGCCTCAGAAACACTTGCT
CCTCGCCAACGACAGCCTCTTGAACTGTGCGGCGGTGAAGCACGAGTTCT
TCAACTACCCCGGTGACGACGGCAATATCCTAGATGGGCATGTGGTGGCA
CGGCAGGGATTCGAGACCGACGGTCGCCTGCGTGTTTGTGTCGAGTGCCT
CAACAGTCTCCTCAAAGACAAGATGCCGGAGACTGCTTTGGCTAACGGGC
TGTGGCTTGGCGATTTCCCGGAGCATTTGCGTTCTGCCACTTTCGTCGAG
ATGGTCGCTGCGAGTCCGGTAAGGATAAGCGGCATGGTCTTGGCTTTGGA
TGAGTTGCGGGTTGGCAACATTGGTGGTTCCGCCAGGAGTCTAATGCGAG
GTACTTTTACGTTCTACATGCAAGATGCATACGGAGTGCAGTTGCGGCTC
CCGGCTTGCGACACCGATATTGCCGGATCATTTACGTGCGCTCTTGTGGG
GGCAAAGCCAAGCGTGGCGCAGCTGCGAAAGTTGTTTGGTGCCAGGCGTA
AAATGGTTGAAGACCTGCTTGCCTTTCAGCTGGACGCCAGTAACGACTTG
GTAGGCGTACACGAGCTGGCGCGGGAGGCACAGCTTTCGAAGGATAACCT
TGACACATACAATGAGGACGGCTCCATACCTCAAGCGATTTTGGACGCAA
TGATTCCTGTTAAGGACACTACGAACGCCTATGCCAACGCACACTCCACC
CATGCACATGGCAACCGTGAGCCGGAAACCGTTGACCACCGCGGAGACGC
CGAAGGCGGTGGTCATGGTCCCGTTGATACGGCAACCACACCTCCGTTCA
TCATCGAGGCAAACGCCATCATGCCGTCCGGGGATGATCTCGCCGTGTCC
AGCCATGCCAAACCCGGTCGTCTGCGAACCCTGGGCTCTTCTTTGAAGTC
ACCGCATCGTGGACGCCCTTCGGGAGCATCTGCTACCGCTTCTCTGGCGC
AACTGGCGGCAGCCCAAGCCCGTGAAGCTCGTGGTCAGGCTCCTGATGGA
ACGGACAACGCCTTGGTCGTCACCCACTCTGGCCGAATGGTGTCGGACGT
CACCAACCCTGGGCTGTTCGTCGGAGCCTACTTCGACCTGTTCCCGCACG
GCGTAGGGGGGCATTTGGACAAACGCCCAAGGCCTTTGGATCTGAAGAAG
TGGGCTCAGATTTTTCTATGGAGACGCGACCCTGGCTTCCGCAAGAACCG
TACCTCCCTGTATTGCGTGTGCTCGTTGATCTTTCGGCGGGAGGCCATAT
CAAATGCCCGGTGGAAGCTCAGCGGGCGAGTGTCGAGGGGTATGGCAGCC
GACATCGCCAGCGTCACCGCCCAAGACCTCAGAGCGGTTGCATCGGAAAT
GGAAACGGGTTCCAGCGGCTTTTCTGCTCTGGCCGATCGTCCAGGAATTC
GTGCACTGATCAAAAGTATGGAATCCGTTCACGCGGGAGCATCGTGGACC
ATTTACAACAAGAGGTCCACCAGAATGATCGCAATATCGTTCATTTTGCA
GATGGGACAGCCGCTGTTCTGGTTGACGATCAACCCCGCGGACGTAAACA
GCCCGATCGTCATGATCCTGGCTGGTGTGGAGCTCGACGTCACCCGCCGC
CTGAAACGCGGCTTCCCAGTCTATGCCGACAAGTTGAGGTTGGTCGCAAA
CGACCCTGTGGCATCTGCAGAGTTTTTCCACGCTACCATCGACGCCGTTT
TGACCTGA
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