mRNA_P-littoralis_Contig1054.44.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1054.44.1 vs. uniprot
Match: A0A6H5JUK3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK3_9PHAE) HSP 1 Score: 261 bits (667), Expect = 1.420e-84 Identity = 133/205 (64.88%), Postives = 151/205 (73.66%), Query Frame = 1
Query: 1 RFPGLQSKDLSTNMLALCRREDCLLPLYKKHEQEESKE*VRRITKRKPRHSRVWSAAPEPVRHLKRQHLHRYCTSPKAVGALLGAVSMTGCVLDMCGGPGDAVTTRLRGTCEVKTNDANSRFSPDTNLDVTSVSFSGDVLKAL-GKQPDWVVTSPPYKNALTCVKAALSVANKGVALKLPLSLLEPCHDRGGWLQANPPAVCVFL 612
+FPG QS TN+LALC+R CLL LY+K E S+E V R K+ PRHSR+WSAAPEPV H KR+ L RYCT P+AV L AV++ GCVLDMCGGP DAV R TCEV TND +SR S TNLD + +SF + KA GKQPDWVVTSPPYK A+ VKAAL+VA KGVALKLPLS LEPC DRGGWL NPPAVC+FL
Sbjct: 58 KFPGFQSIAAGTNLLALCKRAGCLLELYQKQEWARSRERVARKAKQMPRHSRMWSAAPEPVTHDKRRRLDRYCTLPEAVEVLQNAVAIAGCVLDMCGGPEDAVAQGFRSTCEVLTNDVSSRLSAGTNLDASLLSFRDNFRKANPGKQPDWVVTSPPYKGAVGFVKAALAVATKGVALKLPLSFLEPCADRGGWLVDNPPAVCIFL 262
BLAST of mRNA_P-littoralis_Contig1054.44.1 vs. uniprot
Match: D7FJU4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJU4_ECTSI) HSP 1 Score: 243 bits (621), Expect = 9.840e-79 Identity = 124/210 (59.05%), Postives = 150/210 (71.43%), Query Frame = 1
Query: 1 RFPGLQSKDLSTNMLALCRREDCLLPLYKKHEQEESKE*VRRITKRKPRHSRVWSAAPEPVRHLKRQHLHRYCTSPKAVGALLGAVSMTGCVLDMCGGPGDAVTTRLRGTCEVKTNDANSRFSP-----DTNLDVTSVSFSGDVLKAL-GKQPDWVVTSPPYKNALTCVKAALSVANKGVALKLPLSLLEPCHDRGGWLQANPPAVCVFL 612
+FP L ++ L LC R DCLL LY K +E++K + ++ RH W+ PEP +H+KR+ L RYCTSP+AV ALLGAV + GCVLDMCGGPGDA+ TRL TC+V TND ++R SP DTNLD + SF+ D L A G++PDWV+TSPPYK AL VK+ALS+A KGVALKLPLS LEPC DRGGWLQANPPAVCVF
Sbjct: 12 KFPSLNAEGSGMYRLVLCNRPDCLLQLYIKQLREKNKPRTKLRAQQLARHGAKWTGIPEPRKHIKRRCLDRYCTSPEAVEALLGAVELEGCVLDMCGGPGDAIATRLGATCKVVTNDISTRLSPGGLPPDTNLDASLASFAVDFLLAKPGQRPDWVLTSPPYKGALEYVKSALSLAAKGVALKLPLSFLEPCADRGGWLQANPPAVCVFF 221
BLAST of mRNA_P-littoralis_Contig1054.44.1 vs. uniprot
Match: A0A6H5K049_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K049_9PHAE) HSP 1 Score: 243 bits (620), Expect = 1.760e-78 Identity = 122/205 (59.51%), Postives = 149/205 (72.68%), Query Frame = 1
Query: 1 RFPGLQSKDLSTNMLALCRREDCLLPLYKKHEQEESKE*VRRITKRKPRHSRVWSAAPEPVRHLKRQHLHRYCTSPKAVGALLGAVSMTGCVLDMCGGPGDAVTTRLRGTCEVKTNDANSRFSPDTNLDVTSVSFSGDVLKAL-GKQPDWVVTSPPYKNALTCVKAALSVANKGVALKLPLSLLEPCHDRGGWLQANPPAVCVFL 612
+FPGL+ D S + L LC+R CLL L+ ++Q +S+ +R KR P+ W+ APEPV+ LKR+ + RYCTSP + ALLG VS++GCVLDMCGG DAV RLR TC+V TND R SP TNLD +S SF+ D L A G+QPDW+VTSPPYK AL VKAAL+VA KGVALKLPLS LEPC DR GWLQANPPA+C+ +
Sbjct: 4 KFPGLKCGDPSIDKLVLCKRAGCLLELFVLNQQRDSRAPTKRRAKRGPK----WTCAPEPVKQLKRRCVDRYCTSPATLEALLGVVSISGCVLDMCGGTDDAVAIRLRDTCQVLTNDVGPRLSPATNLDASSASFTDDFLAAHHGQQPDWIVTSPPYKGALAFVKAALTVAKKGVALKLPLSFLEPCADRAGWLQANPPALCMMM 204
BLAST of mRNA_P-littoralis_Contig1054.44.1 vs. uniprot
Match: D7G0Y0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Y0_ECTSI) HSP 1 Score: 202 bits (513), Expect = 1.270e-62 Identity = 99/160 (61.88%), Postives = 117/160 (73.12%), Query Frame = 1
Query: 136 RKPRHSRVWSAAPEPVRHLKRQHLHRYCTSPKAVGALLGAVSMTGCVLDMCGGPGDAVTTRLRGTCEVKTNDANSRFSPDTNLDVTSVSFSGDVLKAL-GKQPDWVVTSPPYKNALTCVKAALSVANKGVALKLPLSLLEPCHDRGGWLQANPPAVCVFL 612
R PRH++ APEP HL+R+ L RYCTSP+A+ A LGAV +TGCVLDMCGGP DAV TRLR TCE+ TND +S DTNLD + SF D L A GK+P+WV TSPPY ALT VKAA+S+A KGV K+ + LEPC D GGWLQ NPP++CVFL
Sbjct: 4 RTPRHAKGQRTAPEPQTHLRRRWLDRYCTSPEAMDASLGAVDITGCVLDMCGGPTDAVATRLRSTCEILTNDVSSGRPADTNLDASLESFPEDFLAAYSGKRPEWVATSPPYSRALTFVKAAMSLATKGVTFKMHIFFLEPCADWGGWLQTNPPSLCVFL 163
BLAST of mRNA_P-littoralis_Contig1054.44.1 vs. uniprot
Match: A0A6H5KHQ4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHQ4_9PHAE) HSP 1 Score: 201 bits (512), Expect = 3.320e-61 Identity = 107/211 (50.71%), Postives = 136/211 (64.45%), Query Frame = 1
Query: 1 RFPGLQSKDLSTNMLALCRREDCLLPLYKKHEQEESKE*VRRITKRKPRHSRVWSAAPEPVRHLKRQHLHRYCTSPKAVGALLGAVSMTGCVLDMCGGPGDAVTTRLRGTCEVKTNDANSRFS------PDTNLDVTSVSFSGDVLK-ALGKQPDWVVTSPPYKNALTCVKAALSVANKGVALKLPLSLLEPCHDRGGWLQANPPAVCVFL 612
+FPG+ + + L C+R +C+L KH + + R+ KR + W++APEP H+KR+HL RYCTS AV ALL AV+++G VLDMCGGP DAV +LR TCEV TND +SR S PDT+LD + +F+ + L +QP+ VV SPPYK A+ VKAAL VA GVALK LS LEPC DR WL+ANPP VCVFL
Sbjct: 48 KFPGVMPLGVGIDSLVRCKRAECVLKQNDKHMSDFCHDRARKKQKRNRSEAATWTSAPEPAVHVKRRHLDRYCTSIVAVEALLDAVNVSGRVLDMCGGPDDAVARKLRDTCEVVTNDVSSRLSSDARRAPDTSLDASKSTFAAEFLADGFQQQPERVVASPPYKGAVKFVKAALCVAKHGVALKRSLSFLEPCVDRADWLEANPPTVCVFL 258
BLAST of mRNA_P-littoralis_Contig1054.44.1 vs. uniprot
Match: A0A6H5KD58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD58_9PHAE) HSP 1 Score: 191 bits (484), Expect = 7.340e-58 Identity = 105/188 (55.85%), Postives = 125/188 (66.49%), Query Frame = 1
Query: 1 RFPGLQSKDLSTNMLALCRREDCLLPLYKKHEQEESKE*VRRITKRK----PRHSRVWSAAPEPVRHLKRQHLHRYCTSPKAVGALLGAVSMTGCVLDMCGGPGDAVTTRLRGTCEVKTNDANSRFSPDTNLDVTSVSFSGDVLKAL-GKQPDWVVTSPPYKNALTCVKAALSVANKGVALKLPLSLL 549
+FP L L + L LC+R CLL LYKKHEQ SKE + RK PRH+ PEP HLKR+ L RYCTSP+AV ALLGAVS+TGC+LD+CGGP DAV TRL TCEV TND +S DTNLD + SF D A GK+PDWVVTSP YK+ALT VKAA+S+A +GV + P ++
Sbjct: 21 QFPALDEGGLGASTLTLCKRSGCLLQLYKKHEQRMSKERSKDRRARKAAQTPRHATGMWTVPEPQTHLKRRWLDRYCTSPEAVEALLGAVSITGCILDVCGGPTDAVATRLGPTCEVLTNDVSSGRPADTNLDASLESFPDDFFAASSGKRPDWVVTSPSYKSALTFVKAAMSLATRGVTVPAPTGVV 208
BLAST of mRNA_P-littoralis_Contig1054.44.1 vs. uniprot
Match: A0A6H5KZK3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZK3_9PHAE) HSP 1 Score: 174 bits (441), Expect = 1.880e-52 Identity = 91/147 (61.90%), Postives = 105/147 (71.43%), Query Frame = 1
Query: 28 LSTNMLALCRREDCLLPLYKKHEQEESKE*VRRITKRKPRHSRVWSAAPEPVRHLKRQHLHRYCTSPKAVGALLGAVSMTGCVLDMCGGPGDAVTTRLRGTCEVKTNDANSRFSPDTNLDVTSVSFSGDVLKAL-GKQPDWVVTSPP 465
+ +N++ALC+R LL LYKKHE+ S+E V ++ PRHSR WSAAPEPV H KR+ L RYCTSP AV AL AV + GCVLDMCGGP AV GTCEV TND SR SPD+NLD + +SF D LKA GKQPDWVVTSPP
Sbjct: 1 MGSNLVALCKRSGYLLELYKKHERARSRERVAWKAEQTPRHSRTWSAAPEPVTHDKRRRLDRYCTSPGAVDALRDAVDIMGCVLDMCGGPEAAVALGFGGTCEVLTNDVGSRLSPDSNLDASLLSFPSDFLKAHPGKQPDWVVTSPP 147
BLAST of mRNA_P-littoralis_Contig1054.44.1 vs. uniprot
Match: A0A6H5JUT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUT6_9PHAE) HSP 1 Score: 152 bits (385), Expect = 1.770e-43 Identity = 84/167 (50.30%), Postives = 105/167 (62.87%), Query Frame = 1
Query: 1 RFPGLQSKDLSTNMLALCRREDCLLPLYKKHEQEESKE*VRRITKRKPRHSRVWSAAPEPVRHLKRQHLHRYCTSPKAVGALLGAVSMTGCVLDMCGGPGDAVTTRLRGTCEVKTNDANSRFSPDTNLDVTSVSFSGDVLKALGKQPDWVVTSPPYKNALTCVKAAL 501
+FPG QS TN+LALC+R CLL LY+K E S+E V R K+ PRHSR+WSAAPEPV H K + L RYCT P+AV L AV++ GCVLDMCGGP DAV R TCEV TND +SR S TNLD + ++ + D TS +++ TC++ L
Sbjct: 24 KFPGFQSIAARTNLLALCKRAGCLLELYQKQEWARSRERVARKAKQMPRHSRMWSAAPEPVTHDKCRRLDRYCTLPEAVEVLQNAVAIAGCVLDMCGGPEDAVAQGFRSTCEVLTNDVSSRLSAGTNLDASLLNVDHN---------DHDHTSILHQSKNTCIRQTL 181
BLAST of mRNA_P-littoralis_Contig1054.44.1 vs. uniprot
Match: A0A6H5KTR5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTR5_9PHAE) HSP 1 Score: 152 bits (384), Expect = 2.590e-43 Identity = 77/121 (63.64%), Postives = 86/121 (71.07%), Query Frame = 1
Query: 1 RFPGLQSKDLSTNMLALCRREDCLLPLYKKHEQEESKE*VRRITKRKPRHSRVWSAAPEPVRHLKRQHLHRYCTSPKAVGALLGAVSMTGCVLDMCGGPGDAVTTRLRGTCEVKTNDANSR 363
RFPG QS N+ ALC+R CLL LYKKHE S+E V R K+ PRHSR WSAAPEPV H KR+ RYCTSP+AV AL AV++TGCVLDMCGGP DAV GTCEV TND +SR
Sbjct: 65 RFPGFQSGAAGPNLFALCKRSGCLLELYKKHEWARSRERVARKAKQTPRHSRTWSAAPEPVTHHKRRRFDRYCTSPEAVDALRDAVAITGCVLDMCGGPDDAVAMGFGGTCEVLTNDVSSR 185
BLAST of mRNA_P-littoralis_Contig1054.44.1 vs. uniprot
Match: D8LSI1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSI1_ECTSI) HSP 1 Score: 150 bits (379), Expect = 4.940e-43 Identity = 72/111 (64.86%), Postives = 83/111 (74.77%), Query Frame = 1
Query: 283 MCGGPGDAVTTRLRGTCEVKTNDANSRFSPDTNLDVTSVSFSGDVLKAL-GKQPDWVVTSPPYKNALTCVKAALSVANKGVALKLPLSLLEPCHDRGGWLQANPPAVCVFL 612
MCGGP DAV TRLR TCE+ TND +S DTNL+ + F D L A GK+P+WVVTSPPY ALT VKAA+S+A KGVA K+P+ LEPC DRGGWLQ NPP+VCVFL
Sbjct: 1 MCGGPTDAVATRLRSTCEILTNDVSSGRPADTNLNASLELFPEDFLAAYSGKRPEWVVTSPPYSRALTFVKAAMSLATKGVAFKMPIFFLEPCADRGGWLQTNPPSVCVFL 111 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1054.44.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1054.44.1 >prot_P-littoralis_Contig1054.44.1 ID=prot_P-littoralis_Contig1054.44.1|Name=mRNA_P-littoralis_Contig1054.44.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=117bp MTGCVLDMCGGPGDAVTTRLRGTCEVKTNDANSRFSPDTNLDVTSVSFSGback to top mRNA from alignment at P-littoralis_Contig1054:61507..63058- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1054.44.1 ID=mRNA_P-littoralis_Contig1054.44.1|Name=mRNA_P-littoralis_Contig1054.44.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1552bp|location=Sequence derived from alignment at P-littoralis_Contig1054:61507..63058- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1054:61507..63058- >mRNA_P-littoralis_Contig1054.44.1 ID=mRNA_P-littoralis_Contig1054.44.1|Name=mRNA_P-littoralis_Contig1054.44.1|organism=Pylaiella littoralis U1_48|type=CDS|length=351bp|location=Sequence derived from alignment at P-littoralis_Contig1054:61507..63058- (Pylaiella littoralis U1_48)back to top |