mRNA_P-littoralis_Contig1054.15.1 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig1054.15.1 vs. uniprot
Match: Q8QN79_ESV1K (EsV-1-211 n=2 Tax=root TaxID=1 RepID=Q8QN79_ESV1K) HSP 1 Score: 172 bits (437), Expect = 4.330e-46 Identity = 96/164 (58.54%), Postives = 123/164 (75.00%), Query Frame = 3
Query: 513 PVKENRSSKPFWFDHGTDEERRAYVSIEA-------KKSMVFGEIDIYDTCKQKLESVGRFATLDEIEYADRMKDVQRRASRRSDNLLTPAP-VDAS--AIAVATPVDGTIDPATALLIATHKCTKDVRRRETSICNEAAKLGIAVGEKAGQVGTVAKRLYIDQ 974
P K+ R++ P WF++ T EE+RAY+SIEA KK++V GEID++ TCK++L+SVG+F DEIE+ADR+KDVQRRA+R DN++T AP VD S ++ VA PVD TIDP T LL AT KC+ VR ETSIC EA K+GI+VGEKAGQVG V KRLY ++
Sbjct: 288 PAKKQRAAMPAWFEYATAEEKRAYISIEATTSIVLAKKALVLGEIDVFKTCKEELKSVGQFDQRDEIEFADRIKDVQRRATR-VDNMITAAPTVDTSPVSVCVAMPVDDTIDPETGLLTATPKCSPSVRGPETSICVEAGKMGISVGEKAGQVGKVVKRLYSER 450
BLAST of mRNA_P-littoralis_Contig1054.15.1 vs. uniprot
Match: Q8QN80_ESV1K (EsV-1-210 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QN80_ESV1K) HSP 1 Score: 160 bits (406), Expect = 1.520e-41 Identity = 90/157 (57.32%), Postives = 116/157 (73.89%), Query Frame = 3
Query: 510 PPVKENRSSKPFWFDHGTDEERRAYVSIEAKKSMVFGEIDIYDTCKQKLESVGRFATLDEIEYADRMKDVQRRASRRSDNLL-----TPAPVDASAIAVATPVDGTIDPATALLIATHKCTKDVRRRETSICNEAAKLGIAVGEKAGQVGTVAKRLY 965
PP K S P WF++ T +++ AYV+ + KKS+V EI++++ CK LESVG+FA DEIEYADR++D QRRASR +DNLL +PA V SA+ +ATP+D +IDP T +LIATHK + VR ETSIC EAA+LGI+ GE+AGQVG VAKRLY
Sbjct: 303 PPKKHK--SLPEWFEYATSDQKSAYVAAKVKKSVVVTEIEMHEICKVGLESVGQFAGRDEIEYADRIRDTQRRASR-ADNLLGAPAPSPAVVGDSAMLIATPIDNSIDPETGMLIATHKVSASVRGPETSICVEAARLGISTGERAGQVGKVAKRLY 456
BLAST of mRNA_P-littoralis_Contig1054.15.1 vs. uniprot
Match: A0A6H5K200_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K200_9PHAE) HSP 1 Score: 156 bits (394), Expect = 7.270e-40 Identity = 90/164 (54.88%), Postives = 113/164 (68.90%), Query Frame = 1
Query: 1 MNNITIDASTGDIVVKSMTKCIMPNLHDSSILKSVRRILEDNDGPKMSTRLINGRQMSIATLGLCYDILEKMNGPNWRKWRQESEQAFNHALRERVEHVRSSAK------RSNPSHGNSRFARVETKAVVRQKALRSINIDGSVRIDEASGRASDLVNSFRGCK 474
+NNI IDAS+GD+ VKSM K IMPNL + ILK+V R+L D +GPKMSTRL+NGR ATL LCY+IL+KM+GP WRKWR+ES AF AL ERVE VRSS++ +S P + + T V QKALRSINI+GSVRID+ G+ S + + C+
Sbjct: 5 INNIVIDASSGDVAVKSMIKNIMPNLSEGGILKTVHRVLGDYNGPKMSTRLMNGRLACAATLELCYEILDKMSGPPWRKWREESGNAFKEALCERVESVRSSSQTEQFQLQSPPQPQPPQKVGITT--AVLQKALRSININGSVRIDDGCGKESIIDTTRLVCR 166
BLAST of mRNA_P-littoralis_Contig1054.15.1 vs. uniprot
Match: D8LPL9_ECTSI (EsV-1-210 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPL9_ECTSI) HSP 1 Score: 155 bits (392), Expect = 1.520e-39 Identity = 89/156 (57.05%), Postives = 115/156 (73.72%), Query Frame = 3
Query: 513 PVKENRSSKPFWFDHGTDEERRAYVSIEAKKSMVFGEIDIYDTCKQKLESVGRFATLDEIEYADRMKDVQRRASRRSDNLL-TPAP----VDASAIAVATPVDGTIDPATALLIATHKCTKDVRRRETSICNEAAKLGIAVGEKAGQVGTVAKRLY 965
P K+++S P WF++ T +++ AYV+ + KKS+V E+++++ CK LESVG+FA DEIEYADR++D QRRASR +DNLL PAP V S+ +ATP D +IDP T LIATHK + VR ETSIC EAAKLGI+ GE+AGQVG VAKRLY
Sbjct: 303 PTKKHKSL-PEWFEYATSDQKSAYVAAKVKKSVVVTELEMHEVCKVGLESVGQFAGRDEIEYADRIRDTQRRASR-ADNLLGAPAPSPGDVGDSSTLIATPFDNSIDPETGKLIATHKVSASVRGPETSICVEAAKLGISTGERAGQVGKVAKRLY 456
BLAST of mRNA_P-littoralis_Contig1054.15.1 vs. uniprot
Match: A0A6H5L5N7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5N7_9PHAE) HSP 1 Score: 153 bits (387), Expect = 8.120e-38 Identity = 88/159 (55.35%), Postives = 109/159 (68.55%), Query Frame = 1
Query: 1 MNNITIDASTGDIVVKSMTKCIMPNLHDSSILKSVRRILEDNDGPKMSTRLINGRQMSIATLGLCYDILEKMNGPNWRKWRQESEQAFNHALRERVEHVRSSAKRSNPSHGNSRFA----RVETKAVVRQKALRSINIDGSVRIDEASGRASDLVNSFR 465
+NNI IDAS+GD+ VKSM K IMPNL +S ILK+V R+L D +GPKMSTRL+NGR ATL LC++IL+ M GP WRKWR ES AF ALRERVE VRS+++ +V K V Q ALRSINI GSVRID+ G+AS ++++ R
Sbjct: 5 INNIVIDASSGDVAVKSMIKNIMPNLSESGILKTVHRVLGDCNGPKMSTRLMNGRLACAATLELCFEILDTMTGPPWRKWRSESGNAFKGALRERVESVRSASQTEQLXXXXXXXXXXPQQVGIKTAVLQNALRSINIHGSVRIDDGLGKAS-IIDTVR 162
BLAST of mRNA_P-littoralis_Contig1054.15.1 vs. uniprot
Match: A0A6H5JC19_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC19_9PHAE) HSP 1 Score: 147 bits (370), Expect = 3.130e-37 Identity = 80/153 (52.29%), Postives = 106/153 (69.28%), Query Frame = 3
Query: 513 PVKENRSSKPFWFDHGTDEERRAYVSIEAKKSMVFGEIDIYDTCKQKLESVGRFATLDEIEYADRMKDVQRRASRRSDNLLTPAPVDA--SAIAVATPVDGTIDPATALLIATHKCTKDVRRRETSICNEAAKLGIAVGEKAGQVGTVAKRLY 965
P K+ RS PFWF+ + E++R YVS+ A K+M ++D+ T K +L+SV +F D IE+ADR+KD+Q RA S N+L P+DA S +AVA PV+ +IDP T L IAT C++ VR ETSICNEAAK+G +GEKAGQVG +AK LY
Sbjct: 166 PAKKQRSEAPFWFNFASGEQKRDYVSVMANKAMTLEQMDLCKTLKDELQSVNQFTGRDSIEFADRIKDIQMRALAPS-NMLAAVPMDADNSIVAVARPVNDSIDPETGLRIATATCSESVRGPETSICNEAAKMGFKLGEKAGQVGKMAKSLY 317
BLAST of mRNA_P-littoralis_Contig1054.15.1 vs. uniprot
Match: B5LWM4_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWM4_9PHYC) HSP 1 Score: 146 bits (368), Expect = 4.350e-37 Identity = 83/153 (54.25%), Postives = 106/153 (69.28%), Query Frame = 3
Query: 516 VKENRSSK-PFWFDHGTDEERRAYVSIEAKKSMVFGEIDIYDTCKQKLESVGRFATLDEIEYADRMKDVQRRASRRSDNLLTPAPVDASAI--AVATPVDGTIDPATALLIATHKCTKDVRRRETSICNEAAKLGIAVGEKAGQVGTVAKRLY 965
VKE RS + P WF + T EE+RA+ S K++V E+++YD CK KLESVG+F T D IE+ DR++D QRRA R N++T PVD + + AVA PVD TID AT L +AT +C++ VR ETSICNEAAKLGI VGEK G++G R Y
Sbjct: 165 VKELRSGEEPSWFKNATAEEKRAFASTMVNKAIVSEEVEMYDFCKAKLESVGQFTTRDMIEFGDRVRDAQRRALRAG-NMMTSTPVDDTVVISAVARPVDDTIDSATGLPLATPECSESVRGVETSICNEAAKLGICVGEKGGEIGKELIRRY 316
BLAST of mRNA_P-littoralis_Contig1054.15.1 vs. uniprot
Match: A0A6H5JJP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJP2_9PHAE) HSP 1 Score: 124 bits (310), Expect = 1.700e-27 Identity = 77/155 (49.68%), Postives = 98/155 (63.23%), Query Frame = 1
Query: 1 MNNITIDASTGDIVVKSMTKCIMPNLHDSSILKSVRRILEDNDGPKMSTRLINGRQMSIATLGLCYDILEKMNGPNWRKWRQESEQAFNHALRERVEHVRSSAK--RSNPSHGNSRFARVE---TKAVVRQKALRSINIDGSVRIDEASGRASDL 450
M+ I IDA+TG + VK++ IMP LH SS+LK V R LED+ G M T LINGR AT+ LC IL++M G W +WRQ S F ALRERV V SS + +++P + VE TKAV +KALR++NI GSVR+DE SGR S +
Sbjct: 1 MDTIMIDATTGVVGVKTLIWHIMPQLHSSSVLKGVHRALEDS-GASMDTTLINGRFTKTATVDLCCSILDRMKGNQWDQWRQSSGLVFKRALRERVASVVSSGQVEQAHPPVQQAEEQHVEGVGTKAVALRKALRAMNIQGSVRVDERSGRVSGI 154
BLAST of mRNA_P-littoralis_Contig1054.15.1 vs. uniprot
Match: A0A6H5JG13_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG13_9PHAE) HSP 1 Score: 106 bits (265), Expect = 5.370e-22 Identity = 62/156 (39.74%), Postives = 88/156 (56.41%), Query Frame = 1
Query: 1 MNNITIDASTGDIVVKSMTKCIMPNLHDSSILKSVRRILEDNDGPKMSTRLINGRQMSIATLGLCYDILEKMNGPNWRKWRQESEQAFNHALRERVEHVRSSAKRSNPSHGNSRFARV--------ETKAVVRQKALRSINIDGSVRIDEASGRAS 444
M+NI +DA+ GD+ V SM K P LH S+L SVR +++ DGP ++ +++ GR ++A+L C IL+ M GP W WR +F +L + V N G ++ A ETK +KA R++NIDGSVRIDEASG+AS
Sbjct: 1 MDNIVVDAA-GDVGVSSMIKAAKPELHSGSVLCSVRSAMKNFDGPGLTPKMVKGRTTTMASLDTCKYILDNMPGPRWVMWRSTQGNSFKESLTQHVAATHVQGVEDNVVEGVAQAAEAAEVEQEVAETKGSTLKKAFRTLNIDGSVRIDEASGKAS 155
BLAST of mRNA_P-littoralis_Contig1054.15.1 vs. uniprot
Match: A0A6H5L807_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L807_9PHAE) HSP 1 Score: 72.8 bits (177), Expect = 1.440e-10 Identity = 31/64 (48.44%), Postives = 47/64 (73.44%), Query Frame = 3
Query: 537 KPFWFDHGTDEERRAYVSIEAKKSMVFGEIDIYDTCKQKLESVGRFATLDEIEYADRMKDVQRR 728
+P WF+H + + +RAY S+E +K + FGEIDI +CK++LES+G F LD E+AD ++ +QRR
Sbjct: 357 EPSWFEHASVDLKRAYASMEVRKMIAFGEIDILKSCKEELESIGCFGELDRHEFADGIRRIQRR 420 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1054.15.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1054.15.1 >prot_P-littoralis_Contig1054.15.1 ID=prot_P-littoralis_Contig1054.15.1|Name=mRNA_P-littoralis_Contig1054.15.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=231bp MNNITIDASTGDIVVKSMTKCIMPNLHDSSILKSVRRILEDNDGPKMSTRback to top mRNA from alignment at P-littoralis_Contig1054:25161..26192+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1054.15.1 ID=mRNA_P-littoralis_Contig1054.15.1|Name=mRNA_P-littoralis_Contig1054.15.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1032bp|location=Sequence derived from alignment at P-littoralis_Contig1054:25161..26192+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1054:25161..26192+ >mRNA_P-littoralis_Contig1054.15.1 ID=mRNA_P-littoralis_Contig1054.15.1|Name=mRNA_P-littoralis_Contig1054.15.1|organism=Pylaiella littoralis U1_48|type=CDS|length=693bp|location=Sequence derived from alignment at P-littoralis_Contig1054:25161..26192+ (Pylaiella littoralis U1_48)back to top |