mRNA_P-littoralis_Contig1044.12.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1044.12.1 vs. uniprot
Match: A0A6H5JTB8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTB8_9PHAE) HSP 1 Score: 76.3 bits (186), Expect = 5.750e-14 Identity = 41/82 (50.00%), Postives = 56/82 (68.29%), Query Frame = 1
Query: 4 IARLHLGVDATSCQAERNFSALKLIVSDLRANTSPAKVEKTIFLRLNKHLIPGLGKALRDWDALQAERKAQKEAAANAKNAA 249
IARL+LG++ATSCQAERNFSAL ++ LR N P+KVE+ +F+RLN+HL+ +R+ DA + KA K A + AA
Sbjct: 561 IARLYLGIEATSCQAERNFSALAHLIGQLRCNMLPSKVERMMFIRLNRHLVA----EVRELDAAVVKAKAAKTKVAQSSMAA 638
BLAST of mRNA_P-littoralis_Contig1044.12.1 vs. uniprot
Match: A0A6H5JGG8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGG8_9PHAE) HSP 1 Score: 76.3 bits (186), Expect = 5.860e-14 Identity = 41/82 (50.00%), Postives = 56/82 (68.29%), Query Frame = 1
Query: 4 IARLHLGVDATSCQAERNFSALKLIVSDLRANTSPAKVEKTIFLRLNKHLIPGLGKALRDWDALQAERKAQKEAAANAKNAA 249
IARL+LG++ATSCQAERNFSAL ++ LR N P+KVE+ +F+RLN+HL+ +R+ DA + KA K A + AA
Sbjct: 756 IARLYLGIEATSCQAERNFSALAHLIGQLRCNMLPSKVERMMFIRLNRHLVA----EVRELDAAVVKAKAAKTKVAQSSMAA 833
BLAST of mRNA_P-littoralis_Contig1044.12.1 vs. uniprot
Match: A0A6H5KAS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAS2_9PHAE) HSP 1 Score: 73.6 bits (179), Expect = 4.690e-13 Identity = 40/84 (47.62%), Postives = 55/84 (65.48%), Query Frame = 1
Query: 4 IARLHLGVDATSCQAERNFSALKLIVSDLRANTSPAKVEKTIFLRLNKHLIPGLGKALRDWDALQAERKAQKEAAANAKNAAAG 255
IARL+LG++ATSCQAERNFSA ++ LR P+K E+T+F+RLN+HL+ +R+ DA A+ KA A + AA G
Sbjct: 350 IARLYLGIEATSCQAERNFSARSHLIGQLRCKILPSKFERTMFIRLNRHLVA----EVRELDAAVAQAKATATKTAQSSMAAQG 429
BLAST of mRNA_P-littoralis_Contig1044.12.1 vs. uniprot
Match: A0A6H5KAN7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAN7_9PHAE) HSP 1 Score: 68.6 bits (166), Expect = 2.820e-11 Identity = 45/92 (48.91%), Postives = 61/92 (66.30%), Query Frame = 1
Query: 1 LIARLHLGVDATSCQAERNFSALKLIVSDLRANTSPAKVEKTIFLRLNKHLIPGLGKALRDWDALQAERKAQ---KEAAANAKNAAAGGAGV 267
LIARL G+++TSCQAERNFSAL ++ LR++ P KVE+ +FLRLN+ IP + KAL D A++A + A +E A + AAG A V
Sbjct: 416 LIARLFHGIESTSCQAERNFSALAFLIGSLRSSMLPGKVERLMFLRLNRLYIPEV-KALHD--AVEANKAAAARCQEKVAQVEAEAAGDAVV 504
BLAST of mRNA_P-littoralis_Contig1044.12.1 vs. uniprot
Match: A0A6H5JQI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQI6_9PHAE) HSP 1 Score: 68.6 bits (166), Expect = 2.900e-11 Identity = 39/83 (46.99%), Postives = 51/83 (61.45%), Query Frame = 1
Query: 4 IARLHLGVDATSCQAERNFSALKLIVSDLRANTSPAKVEKTIFLRLNKHLIPGLGK--ALRDWDALQAERKAQKEAAANAKNA 246
IARLHLG++ATSCQAERNFSAL ++ DL N +VE+ + +RLNKHL+ + A W A A+K A A + A
Sbjct: 557 IARLHLGIEATSCQAERNFSALAHLIGDLCCNMLSHRVERMMLVRLNKHLLAEVRAYDAAVAWARAMAANSAEKSAVAQEERA 639
BLAST of mRNA_P-littoralis_Contig1044.12.1 vs. uniprot
Match: A0A6H5KJ52_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ52_9PHAE) HSP 1 Score: 68.6 bits (166), Expect = 2.950e-11 Identity = 45/92 (48.91%), Postives = 61/92 (66.30%), Query Frame = 1
Query: 1 LIARLHLGVDATSCQAERNFSALKLIVSDLRANTSPAKVEKTIFLRLNKHLIPGLGKALRDWDALQAERKAQ---KEAAANAKNAAAGGAGV 267
LIARL G+++TSCQAERNFSAL ++ LR++ P KVE+ +FLRLN+ IP + KAL D A++A + A +E A + AAG A V
Sbjct: 744 LIARLFHGIESTSCQAERNFSALAFLIGSLRSSMLPGKVERLMFLRLNRLYIPEV-KALHD--AVEANKAAAARCQEKVAQVEAEAAGDAVV 832
BLAST of mRNA_P-littoralis_Contig1044.12.1 vs. uniprot
Match: A0A6H5KDJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDJ6_9PHAE) HSP 1 Score: 68.2 bits (165), Expect = 3.880e-11 Identity = 31/51 (60.78%), Postives = 40/51 (78.43%), Query Frame = 1
Query: 4 IARLHLGVDATSCQAERNFSALKLIVSDLRANTSPAKVEKTIFLRLNKHLI 156
IARLHLG++ATSCQAERNFSAL ++ LR N KVE+ + +RLN+HL+
Sbjct: 439 IARLHLGIEATSCQAERNFSALAHLIGTLRCNMLARKVERMMLIRLNRHLL 489
BLAST of mRNA_P-littoralis_Contig1044.12.1 vs. uniprot
Match: A0A6H5JXV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXV5_9PHAE) HSP 1 Score: 67.8 bits (164), Expect = 5.310e-11 Identity = 39/83 (46.99%), Postives = 57/83 (68.67%), Query Frame = 1
Query: 4 IARLHLGVDATSCQAERNFSALKLIVSDLRANTSPAKVEKTIFLRLNKHLIPGLGKALRDWDALQAERKAQKEAAANAKNAAA 252
IARLHLG++ATSCQAERNFSAL ++ +LR N P +VE+ + +RLN+ ++ +R +DA A +A++ A NA +AA
Sbjct: 453 IARLHLGIEATSCQAERNFSALAHLIGNLRCNMLPHRVERMMLIRLNRRMLD----EVRAFDA--AVSRAREMATKNAAKSAA 529
BLAST of mRNA_P-littoralis_Contig1044.12.1 vs. uniprot
Match: A0A6H5KJT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJT6_9PHAE) HSP 1 Score: 64.3 bits (155), Expect = 5.030e-10 Identity = 38/87 (43.68%), Postives = 53/87 (60.92%), Query Frame = 1
Query: 4 IARLHLGVDATSCQAERNFSALKLIVSDLRANTSPAKVEKTIFLRLNKHLIPGLGKALRDWDAL------QAERKAQKEAAANAKNA 246
IARL LG++A+SCQAERNFSAL ++ LR N KVE+ + +RLN+HL+ +R+ DA +A + AQK A + A
Sbjct: 179 IARLFLGIEASSCQAERNFSALSHLIGHLRCNMLSRKVERMMLIRLNRHLVD----EVRELDAAVSLARAKAAKSAQKSVACQEERA 261
BLAST of mRNA_P-littoralis_Contig1044.12.1 vs. uniprot
Match: A0A6H5JRT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRT6_9PHAE) HSP 1 Score: 64.3 bits (155), Expect = 9.060e-10 Identity = 38/87 (43.68%), Postives = 53/87 (60.92%), Query Frame = 1
Query: 4 IARLHLGVDATSCQAERNFSALKLIVSDLRANTSPAKVEKTIFLRLNKHLIPGLGKALRDWDAL------QAERKAQKEAAANAKNA 246
IARL LG++A+SCQAERNFSAL ++ LR N KVE+ + +RLN+HL+ +R+ DA +A + AQK A + A
Sbjct: 744 IARLFLGIEASSCQAERNFSALSHLIGHLRCNMLSRKVERMMLIRLNRHLVD----EVRELDAAVSLARAKAAKSAQKSVACQEERA 826 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1044.12.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1044.12.1 >prot_P-littoralis_Contig1044.12.1 ID=prot_P-littoralis_Contig1044.12.1|Name=mRNA_P-littoralis_Contig1044.12.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=96bp LIARLHLGVDATSCQAERNFSALKLIVSDLRANTSPAKVEKTIFLRLNKHback to top mRNA from alignment at P-littoralis_Contig1044:42366..42685+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1044.12.1 ID=mRNA_P-littoralis_Contig1044.12.1|Name=mRNA_P-littoralis_Contig1044.12.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=320bp|location=Sequence derived from alignment at P-littoralis_Contig1044:42366..42685+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1044:42366..42685+ >mRNA_P-littoralis_Contig1044.12.1 ID=mRNA_P-littoralis_Contig1044.12.1|Name=mRNA_P-littoralis_Contig1044.12.1|organism=Pylaiella littoralis U1_48|type=CDS|length=288bp|location=Sequence derived from alignment at P-littoralis_Contig1044:42366..42685+ (Pylaiella littoralis U1_48)back to top |