mRNA_P-littoralis_Contig104.77.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig104.77.1 vs. uniprot
Match: A0A6H5K6B4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6B4_9PHAE) HSP 1 Score: 127 bits (319), Expect = 2.760e-32 Identity = 59/70 (84.29%), Postives = 63/70 (90.00%), Query Frame = 1
Query: 19 VAVLVTDSWRDSHVDLLKEPKRRRCGFRDVDPTSEFMISSRGGRPKKGAPVQNKNALDGGNYFRNLYSVL 228
+AVLV D+WRDS VDLLK +RRR GFRDVDPT FMISSRGGRPKKGAPVQNKNALDGGNYFRNLYS+L
Sbjct: 195 LAVLVADAWRDSQVDLLKARERRRFGFRDVDPTGAFMISSRGGRPKKGAPVQNKNALDGGNYFRNLYSIL 264
BLAST of mRNA_P-littoralis_Contig104.77.1 vs. uniprot
Match: A0A6H5LNU8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LNU8_9PHAE) HSP 1 Score: 127 bits (319), Expect = 9.080e-32 Identity = 59/70 (84.29%), Postives = 63/70 (90.00%), Query Frame = 1
Query: 19 VAVLVTDSWRDSHVDLLKEPKRRRCGFRDVDPTSEFMISSRGGRPKKGAPVQNKNALDGGNYFRNLYSVL 228
+AVLV D+WRDS VDLLK +RRR GFRDVDPT FMISSRGGRPKKGAPVQNKNALDGGNYFRNLYS+L
Sbjct: 186 LAVLVADAWRDSQVDLLKARERRRFGFRDVDPTGAFMISSRGGRPKKGAPVQNKNALDGGNYFRNLYSIL 255
BLAST of mRNA_P-littoralis_Contig104.77.1 vs. uniprot
Match: A0A6H5K2W2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2W2_9PHAE) HSP 1 Score: 122 bits (307), Expect = 8.930e-31 Identity = 57/70 (81.43%), Postives = 61/70 (87.14%), Query Frame = 1
Query: 19 VAVLVTDSWRDSHVDLLKEPKRRRCGFRDVDPTSEFMISSRGGRPKKGAPVQNKNALDGGNYFRNLYSVL 228
+AVLV D+WRDS VDLLK +RRR GFRDVDPT FMIS RGGRPKKGAPVQNKN LDGGNYFRNLYS+L
Sbjct: 171 LAVLVADAWRDSQVDLLKARERRRFGFRDVDPTGAFMISFRGGRPKKGAPVQNKNDLDGGNYFRNLYSIL 240
BLAST of mRNA_P-littoralis_Contig104.77.1 vs. uniprot
Match: A0A6H5L2B8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2B8_9PHAE) HSP 1 Score: 124 bits (310), Expect = 1.500e-30 Identity = 56/70 (80.00%), Postives = 62/70 (88.57%), Query Frame = 1
Query: 19 VAVLVTDSWRDSHVDLLKEPKRRRCGFRDVDPTSEFMISSRGGRPKKGAPVQNKNALDGGNYFRNLYSVL 228
+AVLV D+WRDS VDL+K +RRR GFRD DPT FMISSRGGRPK+GAPVQNKNALDGGNYFRNLYS+L
Sbjct: 274 LAVLVADAWRDSQVDLIKARERRRFGFRDADPTGAFMISSRGGRPKRGAPVQNKNALDGGNYFRNLYSIL 343
BLAST of mRNA_P-littoralis_Contig104.77.1 vs. uniprot
Match: A0A6H5JCI8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCI8_9PHAE) HSP 1 Score: 121 bits (303), Expect = 1.320e-29 Identity = 57/70 (81.43%), Postives = 61/70 (87.14%), Query Frame = 1
Query: 19 VAVLVTDSWRDSHVDLLKEPKRRRCGFRDVDPTSEFMISSRGGRPKKGAPVQNKNALDGGNYFRNLYSVL 228
+AVLV D+WRDS VDLLK +RRR GFRDVD T FMISSRGGRPKKGA VQNKNALDGGNYFRNLYS+L
Sbjct: 53 LAVLVADAWRDSQVDLLKARERRRFGFRDVDSTGAFMISSRGGRPKKGAAVQNKNALDGGNYFRNLYSIL 122
BLAST of mRNA_P-littoralis_Contig104.77.1 vs. uniprot
Match: D7FQN9_ECTSI (Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2879 RepID=D7FQN9_ECTSI) HSP 1 Score: 120 bits (301), Expect = 2.440e-29 Identity = 58/71 (81.69%), Postives = 62/71 (87.32%), Query Frame = 1
Query: 19 VAVLVTDSWRDSHVDLLKEPK-RRRCGFRDVDPTSEFMISSRGGRPKKGAPVQNKNALDGGNYFRNLYSVL 228
+AVLV + WRDS V LLK+PK RRR GFRDVDPT FMISSRGGRPKKGAPV NKNALDGGNYFRNLYS+L
Sbjct: 208 LAVLVAEVWRDSQVYLLKKPKERRRFGFRDVDPTGAFMISSRGGRPKKGAPVHNKNALDGGNYFRNLYSIL 278
BLAST of mRNA_P-littoralis_Contig104.77.1 vs. uniprot
Match: A0A6H5KMS8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMS8_9PHAE) HSP 1 Score: 119 bits (297), Expect = 8.240e-29 Identity = 58/71 (81.69%), Postives = 61/71 (85.92%), Query Frame = 1
Query: 19 VAVLVTDSWRDSHVDLLKEPK-RRRCGFRDVDPTSEFMISSRGGRPKKGAPVQNKNALDGGNYFRNLYSVL 228
+AVLV D WRDS V LLK+ K RRR GFRDVDPT FMISSRGGRPKKGAPV NKNALDGGNYFRNLYS+L
Sbjct: 187 LAVLVADVWRDSQVYLLKKTKERRRFGFRDVDPTGAFMISSRGGRPKKGAPVHNKNALDGGNYFRNLYSIL 257
BLAST of mRNA_P-littoralis_Contig104.77.1 vs. uniprot
Match: A0A6H5JCS9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCS9_9PHAE) HSP 1 Score: 109 bits (273), Expect = 1.480e-25 Identity = 52/70 (74.29%), Postives = 57/70 (81.43%), Query Frame = 1
Query: 19 VAVLVTDSWRDSHVDLLKEPKRRRCGFRDVDPTSEFMISSRGGRPKKGAPVQNKNALDGGNYFRNLYSVL 228
+AVLV D+WRDS VDLL +R+R GFRDVDPT F S GGRPKKGAP QNKNALDGGNYFRNLYS+L
Sbjct: 208 LAVLVADTWRDSQVDLLAR-ERKRFGFRDVDPTGAFTSSCGGGRPKKGAPAQNKNALDGGNYFRNLYSIL 276
BLAST of mRNA_P-littoralis_Contig104.77.1 vs. uniprot
Match: A0A6H5KE79_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE79_9PHAE) HSP 1 Score: 98.6 bits (244), Expect = 1.150e-21 Identity = 59/122 (48.36%), Postives = 63/122 (51.64%), Query Frame = 1
Query: 19 VAVLVTDSWRDSHVDLLKEPK-RRRCGFRDVDPTSEFMISSRGGRPKKGAPVQNKN---------------------------------------------------ALDGGNYFRNLYSVL 228
+AVLV D WRDS V LLK+PK RRR GFRDVDPT FMISSRGGRPKKGAPV+NKN ALDGGNYFRNLYS+L
Sbjct: 198 LAVLVADVWRDSQVYLLKKPKERRRFGFRDVDPTGAFMISSRGGRPKKGAPVKNKNDRSTLLTVGTTSATSIRFYWSATXARERRRFGFRDVDPAGRACEKQERPFNALDGGNYFRNLYSIL 319
BLAST of mRNA_P-littoralis_Contig104.77.1 vs. uniprot
Match: A0A6H5JDB7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDB7_9PHAE) HSP 1 Score: 92.4 bits (228), Expect = 1.720e-19 Identity = 47/70 (67.14%), Postives = 51/70 (72.86%), Query Frame = 1
Query: 19 VAVLVTDSWRDSHVDLLKEPKRRRCGFRDVDPTSEFMISSRGGRPKKGAPVQNKNALDGGNYFRNLYSVL 228
+ VLV D+WRDS VDLL +RRR GFRDVDPT FMISS GGRP GAPV NKN YFRNLYS+L
Sbjct: 201 LVVLVADAWRDSQVDLLTR-ERRRFGFRDVDPTGAFMISSGGGRPTNGAPVPNKN------YFRNLYSIL 263 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig104.77.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig104.77.1 >prot_P-littoralis_Contig104.77.1 ID=prot_P-littoralis_Contig104.77.1|Name=mRNA_P-littoralis_Contig104.77.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=114bp NNFPEPVAVLVTDSWRDSHVDLLKEPKRRRCGFRDVDPTSEFMISSRGGRback to top mRNA from alignment at P-littoralis_Contig104:392109..392450+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig104.77.1 ID=mRNA_P-littoralis_Contig104.77.1|Name=mRNA_P-littoralis_Contig104.77.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=342bp|location=Sequence derived from alignment at P-littoralis_Contig104:392109..392450+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig104:392109..392450+ >mRNA_P-littoralis_Contig104.77.1 ID=mRNA_P-littoralis_Contig104.77.1|Name=mRNA_P-littoralis_Contig104.77.1|organism=Pylaiella littoralis U1_48|type=CDS|length=342bp|location=Sequence derived from alignment at P-littoralis_Contig104:392109..392450+ (Pylaiella littoralis U1_48)back to top |