mRNA_P-littoralis_Contig104.60.23 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig104.60.23 vs. uniprot
Match: D8LD24_ECTSI (THO complex subunit 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LD24_ECTSI) HSP 1 Score: 2034 bits (5271), Expect = 0.000e+0 Identity = 1220/1690 (72.19%), Postives = 1372/1690 (81.18%), Query Frame = 3
Query: 618 MAREVDKLSRIYSVLTDEEIEAWVSSSEGGKGGQPPKLPSETVTEAFREAEGSFAQEQDGGEGGDSVEINYRDIDIPRLSEVLSELVWRVVGGTLSVDLAIGYLASDKPFKNRLGVHKEEEEGGGGDKGEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPLVEAICDTIWGVDAMVRGTVDAADLENLTAVQRKQWGRLCSFVRRLHVDKLVPQRVLLVLMSEEVLECAGIIAEPTSMRGKKSTPLARAMLKKGTDMMYKQHRFNLQREETEGFAKLLVLVGGVR----GGSKAGSESEENMRRLIGYFDLDPNRSLDLTLDALESDPSNRGLLRLVGKLNKNCMPTVVGFKLRHYRNPAVAKYHRATVRAALKNKEIDSATCKAQMDKATPRSLYVLIAVLLTTGSISLEDVQKHASPGIISLASREKMYLADLEKKLAKAGSKVLRLDADGSIIAANTAGGSDNAMSKLVT---LAMGGGGGYXXXXXXXXXXXXAGSGTLYG-RDRD-RNGAMGNGHGXXXXGRRXXXXXXXXXXXXXXXXXSAGATRAKASENAAVASAGD----GEGDDASVPGADNQLYGVLEALLDIRAWKLASELLATLGKQGIDPLRDTGVREALKRLVKDSLDGLASRYPKPVALYLPGTQRGPT--TAAPSSRAPSPV-SXXXXLSGVASDVEEAEAGEVTLPASSK-AISSRYISNGAILAPTV--TRAA-LADLKDLQRLPGYGAGFVKAENLSEAVEVLGPLLKILGPHLGRDPVMFARVCRVLSAVGSRNPLNIDVRTSTSRRGSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLPAQDPLAATDLA----LKAFPSLFGLSPPEARGLYSRGEAEQGAGGGRAALAKELARRKGSYMKVVLTVAPCLGMTHANPGMQHEVWNMLSELPYDDRFKLYGAWRGHGMEKYALGVKHVQYAVAEIASGSEISRLIKMLTSDNVKEMALKLGKSSHSHPLLFAEKVLNQLESYDNFISMVADSMKFVGKALGLDCIAFTMVQHLCQTKRSFVSDSGLTLERWVTNLSTFAGLLHRKHNETDCKPLLSWAVRSLGEGGEPAMAAGKVLREVLHKAGGVQVLDGWSITQAQVDGKGGGEVLRQENASFGSTIRPTRKSRNYLQDGMEKARASLPLLILPAHQSEALLYEGGSLEDQMRGKPQPHLKVLGHRADETHTTLLQAVEFVCSKSWVRTKCPSFDTLLTKYGLEPRVAFHIWRPVINEYLLKSWFPKSGSKVRYDTREEAVAKRFISKMEASISKLSIVPDSSPVTAKLVLIFWALSLSDVYIPTKKYAQVVTNMNEAKRRAESKLQLEGEADAAALSKAEKARYLSDVKTCPVVATKLNAEKAFQASHVKRVKNKLKEIKASLFA--DRPGKSAEAIDAVLKHLVAPRIGMGPEEAYFCSKFFNTLHAIEAPNFNSLLFYARSFEGLSSTLLCKTQYEAAGLGFFLKDLLENAKEWRYAKNEAIFRMEAGTKHGFKLGGGVGSGPVKSGKPLQLTHAEFVRISGEWSMQVTKALLAAVGSDEFLLIKSGLIMFNKLIETFPLSQRERQMLMAKLSPMTDKTNEPRDDIRVPCTRIVTQLDKQIKEAGPDSTPAGERAATAVAK 5609
MA EV KL IYSVLT+EE+EAWVSS + PKLPSE++T AFR+AE FA+EQDGGEGGDS+EINYRDI IPRLSE+LSELVWRVVGG LSVDLAI YLASDKPF +RL KEEE G GEG XXXXXXXXXXXXXXXXX PL EA+CDT+WGVD MVRGTV+ LE LT VQ +QWGRLCSFV+RLHVD+LVPQR+LLVL+S+EVL + ++A T+ GK++TPLARAMLKKGT+M+YKQHRFNLQREETEGFAKLLVL+ GVR G AG+ESEENMRRLIGYFDLDPNR+LDLTLDALESDP+NRGLLRLVG+ NK+ +P V+GFKL HYRNP+VAKYHRA +R+A KNKEID+A K Q+DK TPRSLYVLIAVLLTTG++S++++ +H SPGI +LA++EK YLADLE K+AKAG+KV +LDADG++ +A + SDNAMSKL + LAMGGGGGYXXXXXXXXXXX GTLYG RDRD RNG M XXXXXX + KA+ NA G DD+ PG+DNQLYGVLEALLD+RAW LAS LLA+L KQGIDPLRD GVREALKRLVKDS+DGLASRYPKPVALY GT+RGPT T A + SPV S SG+ASD EEAEAGEVTLP +SK A+S ++NG L PT+ T A+ L DLKDLQRLPGYG GFVK E LSEAVEVL PLLKI+GP+LGRDP MFARVCRVL+AV SRNPLNI V+TSTS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A+DPL A D A LK F SLFGLSP EAR L+ RGEAE GAG G AAL KEL RRK +Y++VVLTVAP LGMTHANPGMQ EVWNML+ELPY DRF LYGAWRGHGMEKYALGVKH QYAVAEIA+G+EISRLIKMLTSDNVK+MA KLGKSSHSHPLLFAEK LNQLESYDNFISMVADSMKFVGK LGLDC+A+TMVQHLCQ+ RSFVSDSGL LERWVTNLSTFAGLLHRK+ + D KPLLSWAVRSLGEGGEPAMAAGKVLREVLHKAGGVQVLDGWSITQAQVDGKGGG+VLRQENASFGST++P ++++ LQ+ EKA ASLPLL+LPA Q+ +LLYEGGSL+DQMRGKPQPHLKVLGHRADETHTTLLQA+EFVCSK+W+++KCP+ TLLT YGLEPRV FHIWRPVINE L+K WFPK+G+K + R+EA+AKRFI ++EASI++LSIVP+ SP+T+KL+LIFWALSL DVYIPTKKYAQVVTNMNEAKRRA+SKLQ + E + +SKAE++RY+ D KT P VA KL EK Q++HVKRVKNKL+EIKASLFA D+ AE IDAVLKHLVAPR+GMGPEEAYFCSKFFNTLHAIEAPNFNSL+FY+RSFEGLSSTLLCKTQYEAAGLGFFLKDLLEN KEWR KNEAI++MEAGTKHGF LG S V GK Q+ HA FV+ISGEWSMQVTKA++AAV SDEFLLIK GLIM+NKLIETFP+S +ER++L KL P TDK EPRDDIRVPCTRIV QL+KQI E+ PD G+R ATA AK
Sbjct: 1 MAEEVAKLGGIYSVLTEEEVEAWVSSGD-------PKLPSESITGAFRQAERLFAEEQDGGEGGDSLEINYRDIAIPRLSEILSELVWRVVGGELSVDLAISYLASDKPFASRLRA-KEEESG----DGEGEEXXXXXXXXXXXXXXXXXGTEDAAEPL---PLQEALCDTVWGVDVMVRGTVEVLALEKLTPVQEEQWGRLCSFVQRLHVDELVPQRLLLVLLSDEVLVGSKMVAPMTAKGGKQNTPLARAMLKKGTEMVYKQHRFNLQREETEGFAKLLVLLAGVRDSGNGRGNAGAESEENMRRLIGYFDLDPNRALDLTLDALESDPANRGLLRLVGRFNKDSVPPVLGFKLAHYRNPSVAKYHRAAMRSAFKNKEIDAARYKVQIDKVTPRSLYVLIAVLLTTGTLSMDELLRHVSPGIATLAAKEKEYLADLETKIAKAGNKVPKLDADGNMDSAAASASSDNAMSKLGSMGPLAMGGGGGYXXXXXXXXXXX----GTLYGGRDRDGRNGGMXXXXXGSSAXXXXXXXXXRDSRDNGRRQSGDNSAGVKANGNAXXXXXXXXXXXGVDDDSVTPGSDNQLYGVLEALLDLRAWTLASGLLASLTKQGIDPLRDYGVREALKRLVKDSIDGLASRYPKPVALYPAGTKRGPTNTTTAAAGIPSSPVPSLSASASGMASDAEEAEAGEVTLPVTSKTAVSRSTMANGMTLPPTLKSTPASNLKDLKDLQRLPGYGTGFVKPETLSEAVEVLAPLLKIVGPYLGRDPTMFARVCRVLAAVSSRNPLNIVVKTSTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGA--------------------AKDPLGAKDAAARDPLKTFHSLFGLSPAEARELHRRGEAEGGAGAGEAALKKELDRRKVAYVRVVLTVAPSLGMTHANPGMQQEVWNMLAELPYLDRFMLYGAWRGHGMEKYALGVKHPQYAVAEIAAGAEISRLIKMLTSDNVKDMARKLGKSSHSHPLLFAEKALNQLESYDNFISMVADSMKFVGKTLGLDCMAYTMVQHLCQSNRSFVSDSGLDLERWVTNLSTFAGLLHRKNPDADSKPLLSWAVRSLGEGGEPAMAAGKVLREVLHKAGGVQVLDGWSITQAQVDGKGGGDVLRQENASFGSTVKPIKRAKVILQEATEKAGASLPLLVLPALQAGSLLYEGGSLDDQMRGKPQPHLKVLGHRADETHTTLLQAMEFVCSKAWIKSKCPAIKTLLTTYGLEPRVVFHIWRPVINENLIKCWFPKAGTKTEREQRDEAIAKRFIGELEASITELSIVPECSPLTSKLILIFWALSLPDVYIPTKKYAQVVTNMNEAKRRADSKLQ-QAEEEGVTMSKAERSRYMLDRKTSPAVAAKLETEKGSQSAHVKRVKNKLREIKASLFAAKDKHETGAETIDAVLKHLVAPRMGMGPEEAYFCSKFFNTLHAIEAPNFNSLVFYSRSFEGLSSTLLCKTQYEAAGLGFFLKDLLENVKEWRKTKNEAIYKMEAGTKHGFNLGDASQS--VVEGKAPQVNHAAFVKISGEWSMQVTKAVMAAVASDEFLLIKCGLIMYNKLIETFPVSLKERKLLRLKLQPKTDKAIEPRDDIRVPCTRIVNQLNKQISESPPDPVAPGQRPATASAK 1648
BLAST of mRNA_P-littoralis_Contig104.60.23 vs. uniprot
Match: F0YI77_AURAN (THO complex subunit 2 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YI77_AURAN) HSP 1 Score: 295 bits (755), Expect = 2.180e-76 Identity = 220/744 (29.57%), Postives = 356/744 (47.85%), Query Frame = 3
Query: 3402 PCLGMTHANPGMQHEVWNMLSELPYDDRFKLYGAWRGHGMEKYALGVKHVQYAVAEIASGSEISRLIKMLTSD--NVKEMALKLGKSSHSHPLLFAEKVLNQLESYDNFISMVADSMKFVGKALGLDCIAFTMVQHLCQTKRSFVSDSGLTLERWVTNLSTFAGLLHRKHNETDCKPLLSWAVRSLGEGGEPAMAAGKVLREVLHKAGGVQVLDGWSITQAQVDGKGGGEVLRQENASFGSTIRPTRKSRNYLQDGMEKARASLPLLILPAHQSEALLYEGGSLEDQMRGKPQPHLKVLGHRADETHTTLLQAVEFVCSKSWVRTKC------------PSFDTLLTKYGLEPRVAFHIWRPVI------------NEYLLKSWF---PKSGSKVRYDTREEAVAKRFISKMEASISKLSIVPDSSPVTAKLVLIFWALSLSDVYIPTKKYAQVVTNMNEAKRRAESKLQLEGEADAAALSKAEKARYLSDVKTCPVVATKLNAEKAFQASHVKRVKNKLKEIKASLFADRPGKSAEAIDAVLKHLVAPRIGMGPEEAYFCSKFFNTLHAIEAPNFNSLLFYARSFEGLSSTLLCKTQYEAAGLGFFLKDLLENAKEWRYAKNEAIFRMEAGTKHGFKLGGGVGSGPVKSGKPLQLTHAEFVRISGEWSMQVTKALLAAVGSDEFLLIKSGLIMFNKLIETFPLSQRERQMLMAKLSPMTDKTNEPRDDIRVPCTRIVTQLDKQ 5546
P L + NPG EVW LPY +R LY AWRG G+++ A+G+KH + A AE +G + + +K + ++ N K + L K++HS+P + +L+Q+ESYDN I + +S F+ L LD +++ + HL T R + D+G+ + W L+ F G+ +R + +T+ + L+ + + L GG + V E+L + GG +VL+ I+ AQ+ G GGEVLR+E +F + ++++ + LQD + + P+L L A Q L++G H+K LG D L+Q VEF+ + T P TL +EP+VAFH RP++ N+ + + P G R+D +E M A++ +S D +T + L FW+LSL D+ +PTK Y +T + + E + K E ARYL V+ L++E A Q H K+ +++ + I S VL+H V PRI + PE++ FC+ FF+ LH IE PNF+SL +Y R + + + C T +EA LG FLK E K WR+ K+ ++ EA +K GF V G P + ++ ++ + +W ++TK L + E ++ L++ KL +P +R +LM KL + + E D++ R T L K+
Sbjct: 762 PTLSLMPGNPGCVLEVWAATRCLPYCERHLLYKAWRGRGVDRTAIGLKHFEVARAECEAGHDARQALKRVANEKKNAKHVGRALAKTAHSNPFVVFHIILSQIESYDNMIQPIIESFGFM-TPLALDVLSYMLPLHLADTSRHKLQDNGIHISHWFQYLANFTGVFYRVYPQTELRCLIDFLLLRLKAGGSHELL---VFNELLARMGGCEVLE--DISDAQLGGLAGGEVLRREIFAF---EKASKRAISRLQDALCTPDKAAPMLALVAQQRGYALFKG----------EMDHVKQLGQLFDRCQRVLVQLVEFLARSTERPTNLGTQEKHSYLELLPDLQTLCGAMCVEPQVAFHAARPLMAAAAAARRNAAKNQLDITAKIARGPDGGHLRRWDPDDET--------MNAAMLAVSPAHDWEAITIQFYLTFWSLSLYDIKVPTKAYDAQITLLRAKYNNTQR------EVEEPEKRKKEMARYLGTVEA-------LSSELAAQKDHCKQAEDQRRSISES---------------VLQHCVMPRITITPEDSLFCASFFHKLHTIETPNFSSLQYYDRVVKDVFPVVYCATDHEAGCLGIFLKATFEPLKRWRFDKH--LYEKEAASKPGFS---------VAIGSPARCSYEQYCTVFFKWYDKITKIALHCLDQYEDH-GRACLLVLIKLDGVYPARKRVNALLMDKLDII--RKQEDMKDVQAMAQRYHTLLKKR 1436
BLAST of mRNA_P-littoralis_Contig104.60.23 vs. uniprot
Match: UPI000644B7E7 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644B7E7) HSP 1 Score: 263 bits (673), Expect = 1.060e-66 Identity = 193/739 (26.12%), Postives = 359/739 (48.58%), Query Frame = 3
Query: 3414 MTHANPGMQHEVWNMLSELPYDDRFKLYGAWRGHGMEKYALGVKHVQYAVAEIASGSEISRLIKMLTSDNVKEMALKLGKSSHSHPLLFAEKVLNQLESYDNFISMVADSMKFVGKALGLDCIAFTMVQHLCQTKRSFVSDSGLTLERWVTNLSTFAGLLHRKHNETDCKPLLSWAVRSLGEGGEPAMAAGKVLREVLHKAGGVQVLDGWSITQAQVDGKGGGEVLRQENASFGSTIRPTRKSRNYLQDGMEKARASLPLLILPAHQSEALLYEGGSLEDQMRGKPQPHLKVLGHRADETHTTLLQAVEFVCS----KSWVRTKCPSFDTLLTKYGLEPRVAFHIWRPV------INEYLLKSWFPK---------SGSKVRYDTREEAVAKRFISKMEASISKLSIVPDSSPVTAKLVLIFWALSLSDVYIPTKKYAQVVTNMNEAKRRAESKLQLEGEADAAALSKAEKARYLSDVKTCPVVATKLNAEKAFQASHVKRVKNKLKEIKASLFADRPGKSAEAIDAVLKHLVAPRIGMGPEEAYFCSKFFNTLHAIEAPNFNSLLFYARSFEGLSSTLLCKTQYEAAGLGFFLKDLLENAKEWRYAKNEAIFRMEAGTKHGFKLGGGVGSGPVKSGKPLQLTHAEFVRISGEWSMQVTKALLAAVGSDEFLLIKSGLIMFNKLIETFPLSQRERQMLMAKLSPMTDKTNEPRDDIRVPCTRIVTQLDKQIKEAGPDST 5573
M+ NP M +EVWN++S + Y R+KLY W+ ++ K++ VA+I + +EI ++++ ++ DNVK++ +GK +H HP + E VL+ +E+YD+ + + DS+++ L D +++ +++ + +D G + W LS F G L+RK+ T+ + LL + V L + + VL+E+L K GGV++++ QV+ +GGGE LR+E+ + ST R +K+ L++ + +++ + PL +L + Q +++ + +RG + D+ TLLQ EF+ + K ++ + SF++L T YGLEP AFHI+RP+ ++ Y+L + + K ++D K F+ + + S DS + +L FW+LSL D+++P Y +T + + + A+ E + A+ + E+ R + KL E Q + K V ++ K F K +++ + PR +A + +KF LH++ PNF +L ++ +F+ + + T++EA G FL + L WR N +F E HGF K +P T+ +F+ + +W M + A A + S E+++I++ L++ +KLI+ FP+ ++ ++S + K + +++ TR ++ LDK PD T
Sbjct: 481 MSTPNPAMSYEVWNVISGMDYHVRYKLYSDWK-------SMYSKYLPLIVAKIEANTEIKKILRRISKDNVKQLGRTIGKLTHPHPTVVLEAVLSSVENYDSLVHPLVDSLRY-SSVLSFDILSYLLLERFTIQRPKLKAD-GTNIASWYQGLSLFVGFLYRKYPSTELEGLLQYLVNQLKDNNSLDLI---VLKELLSKMGGVEIIE--DPPDNQVEAQGGGETLREESNTM-STSRNIKKAVTKLKEKLIESKLAFPLFVLLSKQRINIVHNNEHTGN-VRG--------IADLLDKCQETLLQYTEFISTTVPPKEYI-SFFDSFESLPTLYGLEPETAFHIYRPIMPHLHLVHNYVLHTTNDPMITGDHNKDTHQKPKWDKSNGEPIKAFVQQCKKIGSS-----DSWGFSPELYTTFWSLSLYDIFVPETAYQAEITKLTQ--QNADPTTDKELDKLTASKKRKERERLIK----------KLKEELDTQQINHKHVMERINSEKDRYFDQNMPKFTMYF---IQYCLYPRASFSQADALYSAKFVQLLHSLNTPNFLTLSYFGNAFKIIDCLIASSTEFEAVRCGRFLAETLSMMSRWR---NNDVFDKECRNMHGFLTD--------KGERP---TYEQFIGATTKWHMDICGAFSACLKSSEYMIIRNALLVLSKLIKVFPIHRKT----FNEISELVTKIKDGMQELKTLATRYLSLLDKNKDMMLPDDT 1156
BLAST of mRNA_P-littoralis_Contig104.60.23 vs. uniprot
Match: A0A131XMJ8_9ACAR (THO complex subunit 2 (Fragment) n=1 Tax=Hyalomma excavatum TaxID=257692 RepID=A0A131XMJ8_9ACAR) HSP 1 Score: 254 bits (650), Expect = 4.670e-65 Identity = 199/747 (26.64%), Postives = 358/747 (47.93%), Query Frame = 3
Query: 3393 TVAPCLGMTHANPGMQHEVWNMLSELPYDDRFKLYGAWRGHGMEKYALGVKHVQYAVAEIASGSEISRLIKMLTSDNVKEMALKLGKSSHSHPLLFAEKVLNQLESYDNFISMVADSMKFVGKALGLDCIAFTMVQHLCQTKRSFVSDSGLTLERWVTNLSTFAGLLHRKHNETDCKPLLSWAVRSLGEGGEPAMAAGKVLREVLHKAGGVQVLDGWSITQAQVDGKGGGEVLRQENASFGSTIRPTRKSRNYLQDGMEKARASLPLLILPAHQSEALLYEGGSLEDQMRGKPQPHLKVLGHRADETHTTLLQAVEFVCSKSWVR---TKCPSFDTLLTKYGLEPRVAFHIWRPVINEYL-LKSWFPKSGSKVRYDTREEAVAKRFISKMEASISKL--SIVP--------DSSPVTAKLVLIFWALSLSDVYIPTKKYAQVVTNMNEAKRRAESKLQLEGEADAAALSKAEKARYLSDVKTCPVVATKLNAEKAFQASHVKRVKNKLKEIKASLFADRPGKSAEAIDAVLKHLVAPRIGMGPEEAYFCSKFFNTLHAIEAPNFNSLLFYARSFEGLSSTLLCKTQYEAAGLGFFLKDLLENAKEWRYAKNEAIFRMEAGTKHGF--KLGGGVGSGPVKSGKPLQLTHAEFVRISGEWSMQVTKALLAAVGSDEFLLIKSGLIMFNKLIETFPLSQRERQMLMAKLSPMTDKTNEPRDDIRVPCTRIVTQLDKQIKEAGPDSTPAGE 5585
T+ P L + N + E+W+++ PY R+ LY W+ + + L ++ + S +I ++K L+ +NVK ++GK SHS+P + +L+Q++++DN I V DS+K++ L D +A+ +++ L ++ + G ++ W+ +L++F G + +K++ D LL L + VL+E++ K G++ + TQ Q++ GGE+L+ E F +R T+KS L+D + + +LPL +L A Q +LY R + HLK++G D+ TL+Q F+ S + PS D LL+K+ ++ VAF + RP+ + LK K K +R++ ++ +S++ ++ P D SP + + FW+LS+ D+Y+PT Y + + + +A E+K A + K EK R C +A KL E+ Q H RV +L+ K + F R K+ E I L+ V PR +A +C+KF + +H ++ PNF++L+ Y + F ++ T+ T+ EA G FL +LE W +++IF E GF K G S + + + + + + +W ++TKAL+ + S +++ I++ LI+ K++ FP+ Q L ++ + + + R D+ V + T Q+K PD P E
Sbjct: 85 TLLPSLSLLECNCCVADEIWSLVRLYPYQQRYLLYHHWKNTAYKSHPLLIR------VKADSLKKIKYIMKRLSKENVKPSGRQIGKLSHSNPCFLFDYILSQIQTWDNLIVPVVDSLKYL-TMLSYDVLAYCVIEALSSPEKDRMKHDGTSISLWLQSLASFCGAVFKKYS-IDLTGLLQLVANQLKAERSLDLL---VLKEIVQKMTGIESTE--QATQDQLEAMCGGELLKAEGGYF-HQLRNTKKSSQRLKDSLLEQDLALPLCLLMAQQKNCILY---------REQEASHLKLVGKLYDQCQDTLVQFCSFLSSSLSTEEYAVRLPSVDQLLSKFHVQADVAFFLARPMFGHQINLKFDEAKRKDKSFKTLAAAQKLQRYVDAVDQVMSQVVENVRPLHPAKTWEDLSP---QFYVTFWSLSMYDLYVPTSSYQREMQKLRDASNSEETKDM------APSKRKKEKDR-------CDALADKLAEEERKQQEHCTRVLARLRSEKDAWFQSRSSKN-ETITQFLQLCVFPRCTFTALDALYCAKFVHLIHILKTPNFSTLICYDKIFCDITYTVTACTENEANRYGRFLCSMLETVMRWH--SDKSIFDKECANFPGFMTKFRGASQSSDIATD---HVDYENYRHVCHKWHFKITKALVICLESGDYVQIRNSLIVLTKVLPHFPVMTNLGQALERRIEKIRQEEKDKRPDLFV----LATGYAGQLKNKKPDLIPEHE 782
BLAST of mRNA_P-littoralis_Contig104.60.23 vs. uniprot
Match: A0A3S3PR64_9ACAR (THO complex subunit 2 (Fragment) n=1 Tax=Dinothrombium tinctorium TaxID=1965070 RepID=A0A3S3PR64_9ACAR) HSP 1 Score: 256 bits (654), Expect = 6.570e-65 Identity = 197/736 (26.77%), Postives = 345/736 (46.88%), Query Frame = 3
Query: 3393 TVAPCLGMTHANPGMQHEVWNMLSELPYDDRFKLYGAWRGHGMEKYALGVKHVQYAVAEIASGSEISRLIKMLTSDNVKEMALKLGKSSHSHPLLFAEKVLNQLESYDNFISMVADSMKFVGKALGLDCIAFTMVQHLCQTKRSFVSDSGLTLERWVTNLSTFAGLLHRKHNETDCKPLLSWAVRSLGEGGEPAMAAGKVLREVLHKAGGVQVLDGWSITQAQVDGKGGGEVLRQENASFGSTIRPTRKSRNYLQDGMEKARASLPLLILPAHQSEALLYEGGSLEDQMRGKPQPHLKVLGHRADETHTTLLQAVEFVCSKSWVRT---KCPSFDTLLTKYGLEPRVAFHIWRPVINEYL------LKSWFPKSGSKVRYDTREEAVAKRFISKMEASISKLSIVPDSSPVTAKLVLIFWALSLSDVYIPTKKYAQVVTNM-NEAKRRAESKLQLEGEADAAALSKAEKARYLSDVKTCPVVATKLNAEKAFQASHVKRVKNKLKEIKASLFADRPGKSAEAIDAVLKHLVAPRIGMGPEEAYFCSKFFNTLHAIEAPNFNSLLFYARSFEGLSSTLLCKTQYEAAGLGFFLKDLLENAKEWRYAKNEAIFRMEAGTKHGFKLGGGVGSGPVKSGKPLQLTHAEFVRISGEWSMQVTKALLAAVGSDEFLLIKSGLIMFNKLIETFPLSQRERQMLMAKLSPMTDKTNEPRDDIRVPCTRIVTQLDKQIKEAGPDS 5570
++ P + + ++N G+ E+W + Y +R++LY W+ + + + I ++K L+ +NVK ++GK SHS+P E +L+Q++SYDN I V DS+K++ + D +AF +++ L + G T+ W+ +LS F G + +K+ + LL + L E ++ +L+E++ K G++ + +T Q+ GGE+LR E F + +R TRKS L+D + ++ ++PL IL A Q +LY E + HLK++G D+ TL+Q F+ S + + P L+T+Y L VAF + RP+I ++ LK S Y E V K + + + S D SP + + FW LS+ D+ +P Y + V + N+ + E+K ++ SK +K +V+ C ++ +L E+ Q HV+RVK +L++ K F + K E L+H + PR +A +C+KF + LH I+ PNF++L+ Y R F +S T+ T EA G FL LLE +W K++A+F E GF P+ + + + + +W ++TKA + + S +++ I++ LI+ K++ FP+ Q + ++ + E R D+ T QL + P+S
Sbjct: 465 SILPSMSLINSNCGLSEELWQFMKNFSYGNRYRLYSNWKAEPQIALMIRTRSITM--------KRIKYIMKRLSKENVKLSGRQIGKLSHSNPSFLFEYILSQIQSYDNLIGPVVDSLKYL-TPISYDVLAFCVIEALSDPSKDRTKHDGATISAWLLSLSNFCGSVVKKY-PVELPGLLQFVANQLKA--EKSLDL-LILKEIVQKMAGIETTE--EMTNEQLAAMAGGELLRAEGGYF-NQVRNTRKSSVRLKDALLESNLAMPLCILMAQQRNCILY----CEQE-----HSHLKLVGKLYDQCQETLVQYGSFLSSSLSIDDYIGRLPPLSKLITEYNLNADVAFFLVRPMIVHHINMKFEELKKGERPSKFNQMYIEAWEHVTKPMVESIVPAFSS-KFWDDLSP---RFFVTFWTLSMFDLEVPKSSYDREVDRLKNQITQTEENKEMVQ--------SKKKK-----EVERCRLLQERLLEEQLRQDEHVRRVKQRLEKEKEQWFQSKVAKM-EMTTQFLQHCLFPRCIFTATDALYCAKFVHLLHTIKTPNFSTLICYDRIFGDISYTMCSCTVNEANHYGRFLCALLETVMKWH--KDKAVFEKECAKYPGFVT-------KFCDKDPVHVDYENYRHVCHKWHYRLTKAFILCLDSTDYIQIRNSLIVLTKVLPFFPVMISFAQAIERRVEAIRVAEKEKRPDLYALATGYSGQLKVKKSSFVPES 1148
BLAST of mRNA_P-littoralis_Contig104.60.23 vs. uniprot
Match: A0A7R9KUZ6_9ACAR (THO complex subunit 2 n=1 Tax=Medioppia subpectinata TaxID=1979941 RepID=A0A7R9KUZ6_9ACAR) HSP 1 Score: 257 bits (656), Expect = 7.880e-65 Identity = 194/735 (26.39%), Postives = 343/735 (46.67%), Query Frame = 3
Query: 3396 VAPCLGMTHANPGMQHEVWNMLSELPYDDRFKLYGAWRGHGMEKYALGVKHVQYAVAEIASGSEISRLIKMLTSDNVKEMALKLGKSSHSHPLLFAEKVLNQLESYDNFISMVADSMKFVGKALGLDCIAFTMVQHLCQTKRSFVSDSGLTLERWVTNLSTFAGLLHRKHNETDCKPLLSWAVRSLGEGGEPAMAAGKVLREVLHKAGGVQVLDGWSITQAQVDGKGGGEVLRQENASFGSTIRPTRKSRNYLQDGMEKARASLPLLILPAHQSEALLYEGGSLEDQMRGKPQPHLKVLGHRADETHTTLLQAVEFVCSKSWVR---TKCPSFDTLLTKYGLEPRVAFHIWRPVINEYLLKSWFPKSGSKVRYDTREEAVAKRFISKMEASISKL--SIVPDSSP-----VTAKLVLIFWALSLSDVYIPTKKYAQVVTNMNEAKRRAESKLQLEGEADAAALSKAEKARYLSDVKTCPVVATKLNAEKAFQASHVKRVKNKLKEIKASLFADRPGKSAEAIDAVLKHLVAPRIGMGPEEAYFCSKFFNTLHAIEAPNFNSLLFYARSFEGLSSTLLCKTQYEAAGLGFFLKDLLENAKEWRYAKNEAIFRMEAGTKHGFKLGGGVGSGPVKSGKPLQLTHAEFVRISGEWSMQVTKALLAAVGSDEFLLIKSGLIMFNKLIETFPLSQRERQMLMAKLSPMTDKTNEPRDDIRVPCTRIVTQLDKQIKEAGPDS 5570
V P + + +N + E+W +L PY R+KLY W+ + + V I ++K L+ +NVK ++GK SHS+P + +L+Q++SYDN I V DS+K++ + D ++F +++ L + G T+ W+ +L+ F G + +K+ + LL + L E + +L+E++ K G++ + +T Q+ GGE+LR E F + +R T+KS + L+D + ++PL IL A Q +L+ Q H+K++G D+ TL+Q F+ + + P + L++ Y L + F + RP+I Y+ K+ F + + + + VA ++I +A + L SIVP SP ++ + + FW L++ D+ +PT+ Y + + + + AE L A K EK R LS ++ +L E + Q H KRV +L++ K F + K E L+H + PR +A FC+KF + LH ++ PNF++L+ Y R F +S T+ T+ EA G FL LLE W KN+ +F E GF P+ + + + +W ++TKA + + S +++ I++ LI+ K++ FP+ Q + ++ + ++ E R D+ T QL + P+S
Sbjct: 809 VLPAMSLVESNCALSEELWLLLKSFPYQQRYKLYTNWKAEPSNTLMIKTRAVTL--------KRIKYIMKRLSKENVKLSGRQIGKLSHSNPSFLFQHILSQIQSYDNLIGPVVDSLKYL-TTISYDVLSFCVIEALANPAKEQTKHEGATIAPWLLSLANFCGSVVKKY-PIELPGLLQFVANQLKS--EKCLDL-LILKEIVQKMAGIEASE--EMTNEQLGALSGGELLRAEGGYF-TQVRNTKKSTSRLKDALLDNNLAMPLCILIAQQRNCILFH-----------EQSHIKLVGKLYDQCQETLVQYGSFLANTLNIEDYINNLPPLEKLISDYSLSADITFFLVRPMIIHYINKN-FDELKKSEKSSSNSKLVA-QYIEASDAVTTPLVKSIVPAYSPKFWDDLSPRFFVTFWTLTMYDLQVPTQSYERELKRFKDQIQSAEENKDL-----APNKKKKEKERCLSMME-------RLADEDSRQQEHNKRVLARLQKEKDQWFQSKVAKM-EMTTQFLQHCLFPRCKFAASDALFCAKFVHLLHCLQTPNFSTLICYDRIFGDISYTMCSCTENEANHYGRFLCSLLETVMNWH--KNKDVFNNECAKYPGFVT-------KFCEKDPVHVDFENYRHVCHKWHYRLTKAFILCLDSADYIQIRNSLIILTKVLPQFPVMISFAQAIERRVDNIRNEEKEKRPDLYALATGYSGQLKARKSNFIPES 1492
BLAST of mRNA_P-littoralis_Contig104.60.23 vs. uniprot
Match: A0A131Z3A9_RHIAP (THO complex subunit 2 n=9 Tax=Rhipicephalinae TaxID=426437 RepID=A0A131Z3A9_RHIAP) HSP 1 Score: 256 bits (653), Expect = 1.520e-64 Identity = 195/747 (26.10%), Postives = 358/747 (47.93%), Query Frame = 3
Query: 3393 TVAPCLGMTHANPGMQHEVWNMLSELPYDDRFKLYGAWRGHGMEKYALGVKHVQYAVAEIASGSEISRLIKMLTSDNVKEMALKLGKSSHSHPLLFAEKVLNQLESYDNFISMVADSMKFVGKALGLDCIAFTMVQHLCQTKRSFVSDSGLTLERWVTNLSTFAGLLHRKHNETDCKPLLSWAVRSLGEGGEPAMAAGKVLREVLHKAGGVQVLDGWSITQAQVDGKGGGEVLRQENASFGSTIRPTRKSRNYLQDGMEKARASLPLLILPAHQSEALLYEGGSLEDQMRGKPQPHLKVLGHRADETHTTLLQAVEFVCSKSWVRT---KCPSFDTLLTKYGLEPRVAFHIWRPVINEYLLKSWFPKSGSKVRYDTREEAVA-KRFISKMEASISKL--SIVP--------DSSPVTAKLVLIFWALSLSDVYIPTKKYAQVVTNMNEAKRRAESKLQLEGEADAAALSKAEKARYLSDVKTCPVVATKLNAEKAFQASHVKRVKNKLKEIKASLFADRPGKSAEAIDAVLKHLVAPRIGMGPEEAYFCSKFFNTLHAIEAPNFNSLLFYARSFEGLSSTLLCKTQYEAAGLGFFLKDLLENAKEWRYAKNEAIFRMEAGTKHGF--KLGGGVGSGPVKSGKPLQLTHAEFVRISGEWSMQVTKALLAAVGSDEFLLIKSGLIMFNKLIETFPLSQRERQMLMAKLSPMTDKTNEPRDDIRVPCTRIVTQLDKQIKEAGPDSTPAGE 5585
T+ P L + N + E+W+++ PY R+ LY W+ + + + L ++ + S +I ++K L+ +NVK ++GK SHS+P + +L+Q++++DN I V DS+K++ L D +A+ +++ L ++ + G ++ W+ +L++F G + +K++ D LL L + VL+E++ K G++ + TQ Q++ GGE+L+ E F +R T+KS L+D + + +LPL +L A Q +LY R + HLK++G D+ TL+Q F+ S + PS D LL+K+ ++ VAF + RP+ + + + T A +R++ ++ +S++ ++ P D SP + + FW+LS+ D+Y+PT Y + + + +A E+K + A K + D C +A KL E+ Q H RV +L+ K + F R K+ E I L+ V PR +A +C+KF + +H ++ PNF++L+ Y + F ++ T+ T+ EA G FL +LE W +++IF E GF K G S + + + + + + +W ++TKAL+ + S +++ I++ LI+ K++ FP+ Q L ++ + + + R D+ V + T Q+K PD P E
Sbjct: 481 TLLPSLSLLECNCCVADEIWSLVKLYPYQQRYLLYHHWKNNAYKSHPLLIR------VKADSLKKIKYIMKRLSKENVKPSGRQIGKLSHSNPCFLFDYILSQIQTWDNLIVPVVDSLKYL-TMLSYDVLAYCVIEALSSPEKDRMKHDGTSISMWLQSLASFCGAVFKKYS-IDLTGLLQLVANQLKAERSLDLL---VLKEIVQKMTGIESTE--QATQDQLEAMCGGELLKAEGGYF-HQLRNTKKSSQRLKDSLLEQDLALPLCLLMAQQKNCILY---------REQEASHLKLVGKLYDQCQDTLVQFCSFLSSSLSTEEYAGRLPSVDQLLSKFHVQADVAFFLARPMFGHQITLKFDEAKRKDKSFKTLAAAQKLQRYVDAVDQVMSQVVENVRPLHPAKTWEDLSP---QFYVTFWSLSMYDLYVPTSSYQREMQKLRDASNSEETK-DMSNPAQRRPSQAPSKRKKEKD--RCDALADKLAEEERKQQEHCTRVLARLRSEKDAWFQSRSSKN-ETITQFLQLCVFPRCTFTALDALYCAKFVHLIHILKTPNFSTLICYDKIFCDITYTVTACTENEANRYGRFLCSMLETVMRWH--SDKSIFDKECANFPGFMTKFRGASQSSDIATD---HVDYENYRHVCHKWHFKITKALVICLESGDYVQIRNSLIVLTKVLPHFPVMTNLGQALERRIEKIRQEEKDKRPDLFV----LATGYAGQLKNKKPDLIPEHE 1188
BLAST of mRNA_P-littoralis_Contig104.60.23 vs. uniprot
Match: A0A7S0FAZ8_9STRA (THO complex subunit 2 n=1 Tax=Rhizosolenia setigera TaxID=3005 RepID=A0A7S0FAZ8_9STRA) HSP 1 Score: 254 bits (648), Expect = 1.560e-64 Identity = 194/771 (25.16%), Postives = 364/771 (47.21%), Query Frame = 3
Query: 3372 SYMKVVLT--VAPCLGMTHANPGMQHEVWNMLSELPYDDRFKLYGAWRGHGMEKYALGV-------------KHVQYAVAEIASGSEISRLIKMLTSDNVKEMALKLGKSSHSHPLLFAEKVLNQLESYDNFISMVADSMKFVGKALGLDCIAFTMVQHL---CQTKRSFVSDSGLTLERWVTNLSTFAGLLHRKHNETDCKPLLSWAVRSLGEGGEPAMAAGKVLREVLHKAGGVQVLDG---WSITQAQVDGKGGGEVLRQENASFGSTIRPTRKSRNYLQDGMEKARASLPLLILPAHQSEALLYEGGSLEDQMRGKPQPHLKVLGHRADETHTTLLQAVEFVCSKSWVRTKC-----------PSFDTLLTKYGLEPRVAFHIWRPVINEYLLKSWFPKSGSKVRYDTREEAVAKRFISKMEASISKLS----IVPDS--SPVTAKLVLIFWALSLSDVYIPTKKYAQVVTNMNEAKRRAESKLQLEGEADAAALSKAEKARYLS-----DVKTCPVVATKLNAEKAFQASHVKRVKNKLKEIKASLFADRPGKSAEAIDAVLKHLVAPRIGMGPEEAYFCSKFFNTLHAIEAPNFNSLLFYARSFEGLSSTLLCKTQYEAAGLGFFLKDLLENAKEWRYAKNEAIFRMEAGTKHGFKLGGGVGSGPVKSGKPLQLTHAEFVRISGEWSMQVTKALLAAVGSDEFLLIKSGLIMFNKLIETFPLSQRERQMLMAKLSPMTDKTNEPRDDIRVPCTRIVTQLDKQIKE 5555
+Y V+L + P L + +NP + E+W+ + LPYD R++LY W+G +E+ + + K++ +E+ +G E +++K + +N ++ K+SH++P++ K+L+Q+E+YDN I+++ D+ K + K L LD + + ++Q L Q + S +G+ +W+T+LS F G ++K E + + +L + + + +G + VLR +L AGG D S+++ Q++G+ G ++L++E +SFG + +KS L++ + + L LL+ A ++YE GK + HLK++G++ D HT L +EF+ + + P+ D L ++Y L A+ + RP+I + S ++G K + E + + + S + LS ++P S +T L FW+ SL D+ P +Y V + K+ +E + L+ E + + + ++ + +++ A L AE Q H + +K E K F+D AE + L V R + P++A +C+KF LH I+A +F+ + F + +S L C T+ EAA GF L ++ EWRY N+ F + ++H E++ +W + L+ + S E++ I++ L++ +++E FP + L L P+ D+ + P DI+ +QLDK K+
Sbjct: 219 NYTMVILCRFLVPSLSLFASNPAISSELWSCIKVLPYDVRYQLYDCWKGEKLERDSCFILATQVSHSCLTNSKNLVLIESEVNTGIECRKILKRICKENAXXXXXQIAKTSHNNPIVVFTKILSQIETYDNLITLMVDAFKNLTK-LSLDIVGYCLLQSLGGGSQDNKRKKSSNGMNKIQWLTSLSQFVGAFYKKFPEVESRGMLFFIIGEVQQGETTELT---VLRNLLTTAGGYDFADSDNFASLSKIQLEGRAGSQLLKRETSSFGVVEKLNKKSSKRLREVLLDEKTGLQLLVCLAQMRVKIMYETHD------GKKE-HLKLIGNKFDLCHTILNLLLEFLTDPTDEESNSNSAIIKYGEILPTLDELSSQYKLSLTSAWMLCRPLIRGAIFHS---QTGKK----KKSEEIPEFLLPYSPTSETMLSTYEKMIPSYLWSSITPLLFHNFWSYSLYDISCPVSRYESEVLRL---KKESERLVTLQKEVPSTMVDRDMPSQVFTQGDKQELERVNRNAEVLTAEMKIQKDHCSDLLSKFTEQKTDYFSDN---KAENLQCFLSTCVLRRCVLSPQDAIYCAKFIFMLHDIQAEHFSIIQFLDILIDSVSKGLYCVTENEAACTGFLLLEIWTKISEWRY--NDGKFSLS------------------------DMSHTEYIEYYKKWHSALGTTLIGCLQSKEYINIRAALVVLLRIVEVFPTRPNLGEQLFKHLEPLQDEKSRP--DIKTMAQAYESQLDKARKD 937
BLAST of mRNA_P-littoralis_Contig104.60.23 vs. uniprot
Match: C1EC29_MICCC (THO complex subunit 2 n=2 Tax=Micromonas TaxID=38832 RepID=C1EC29_MICCC) HSP 1 Score: 255 bits (652), Expect = 1.810e-64 Identity = 193/738 (26.15%), Postives = 358/738 (48.51%), Query Frame = 3
Query: 3393 TVAPCLGMTHANPGMQHEVWNMLSELPYDDRFKLYGAWRGHGMEK---YALGVKHVQYAVAEIASGSEISRLIKMLTSDNVKEMALKLGKSSHSHPLLFAEKVLNQLESYDNFISMVADSMKFVGKALGLDCIAFTMVQHLCQTKRSFVSDSGLTLERWVTNLSTFAGLLHRKHNETDCKPLLSWAVRSLGEGGEPAMAAGKVLREVLHKAGGVQVLDGWSITQAQVDGKGGGEVLRQENASFGSTIRPTRKSRNY--LQDGMEKARA-----SLPLLILPAHQSEALLYEGGSLEDQMRGKPQPHLKVLGHRADETHTTLLQAVEFV----CSKSWVRTKCPSFDTLLTKYGLEPRVAFHIWRPVINEYLLKSWFPKSGSKVRYDTREEAVAKRF----ISKMEASISKLSIVPDSS--PVTAKLVLIFWALSLSDVYIPTKKYAQVVTNMNEAKRRAESKLQLEGEADAAALSKAEKARYLSDVKTCPVVATKLNAEKAFQASHVKRVKNKLKEIKASLFADRPGKSAEAIDAVLKHLVAPRIGMGPEEAYFCSKFFNTLHAIEAPNFNSLLFYARSFEGLSSTLLCKTQYEAAGLGFFLKDLLENAKEWRYAKNEAIFRMEAGTKHGFKLGGGVGSGPVKSGKPLQLTHAEFVRISGEWSMQVTKALLAAVGSDEFLLIKSGLIMFNKLIETFPLSQRERQMLMAKLSPMTDKTNEPRDDIRVPCTRIVTQLDKQ 5546
++ P LG+ HANPG E W++L LP RF+LY W+ E+ AL + Q+A A+ + + ++++ L+ +NVKE KL KS+H +PL + Q+E+Y N I+ V D+ K++ LG D + F +++ L + + + D G + W++ L+TF G L +K++ + LL + V +L + + VL+E++ + G + L+ ++ AQV+ GGE LR E +F + + P +++ L++ ++K ++PLL+L A +A++++ S HLK++ D T +F+ + + T PS L+ YGLEP VAFHI+RPV+ + P D E+VA ++ E + ++P+ + ++ +L L FW+L+L D+Y+P +Y V A +++ G D A K EK R L D+ + +L+A++ A+ KR+ + K D P + +++ V PR +A +C++F LH ++ P F ++ Y + ++ + T+YEA LG FL + L W+ +EA + E GF + ++++ EFV++ +W +++ K+ L+ + D +L I++ L++ K+++ FP R ++ K+ + K N+ R D++ R + L ++
Sbjct: 550 SLIPALGLIHANPGAVFETWSVLELLPVTTRFRLYSEWKS-SFERDPGSALETRRPQFAAAKRVAEQDTMKVMRRLSKENVKEFGRKLAKSAHGNPLAVMSSIAVQIEAYTNMIAPVCDAFKYL-TPLGYDVLTFVIIEKLAEGREK-LKDDGQNVSLWLSALATFCGHLAKKYSAIELSALLQYLVNTLKDNQSLDLL---VLKELITRMTGKESLE--DMSDAQVEAMAGGETLRSEAINFNNDMAPKARAKGVARLKEALQKGTLGGDPLTVPLLVLIAQTRQAIIFKTDS----------KHLKLVSQLYDGCQETFFHYCDFLEQAFDDQEYAAT-VPSLKALVHDYGLEPGVAFHIYRPVLRHLKPR---PTPSKDKSVDECNESVALDIGGVKMTWKELLETVRGMLPEETWADISPELYLAFWSLTLYDLYVPRARYEAEVDKCRAALDVLDNQRD-SGTRDEQAKRKKEKDR-LKDL--IDKLQKELDAQERAVAARTKRLMIE----KDQYLVDLPN-HGNTVGRLVEQCVFPRCVFSHADAMYCARFVERLHLLDTPYFATVQHYNLTLTVVAQLVFSCTEYEAGRLGKFLNETLTQLSVWK--GDEATYEKECTAVSGFNM-------KFADPSSKKVSYEEFVKLVYKWHLRIAKSFLSCLEGDNYLEIRNSLMVLTKVVKVFPAISRIGAHILRKVEKI--KENDERGDLKTMAARYLAMLQRE 1245
BLAST of mRNA_P-littoralis_Contig104.60.23 vs. uniprot
Match: UPI001F4F3B5D (THO complex subunit 2 isoform X1 n=4 Tax=Schistocerca TaxID=7008 RepID=UPI001F4F3B5D) HSP 1 Score: 256 bits (653), Expect = 1.970e-64 Identity = 197/757 (26.02%), Postives = 373/757 (49.27%), Query Frame = 3
Query: 3396 VAPCLGMTHANPGMQHEVWNMLSELPYDDRFKLYGAWRGHGMEKYALGVKHVQYAVAEIASGSEISRLIKMLTSDNVKEMALKLGKSSHSHPLLFAEKVLNQLESYDNFISMVADSMKFVGKALGLDCIAFTMVQHLCQTKRSFVSDSGLTLERWVTNLSTFAGLLHRKHNETDCKPLLSWAVRSLGEGGEPAMAAGKVLREVLHKAGGVQVLDGWSITQAQVDGKGGGEVLRQENASFGSTIRPTRKSRNYLQDGMEKARASLPLLILPAHQSEALLYEGGSLEDQMRGKPQPHLKVLGHRADETHTTLLQAVEFV---CSKSWVRTKCPSFDTLLTKYGLEPRVAFHIWRPVINEYL------LKSWFP---KSGSKVRYDTREEAVAKRFISKMEASISKLSIVPDSSPVTAKLVLIFWALSLSDVYIPTKKYAQVVTNMNEAKRRAESKLQLEGEADAAALSKAEKARYLSDVKTCPVVATKLNAEKAFQASHVKRVKNKLKEIKASLFADRPGKSA--EAIDAVLKHLVAPRIGMGPEEAYFCSKFFNTLHAIEAPNFNSLLFYARSFEGLSSTLLCKTQYEAAGLGFFLKDLLENAKEWRYAKNEAIFRMEAGTKHGFKLGGGVGSGPVKSGKPLQLTHAEFVRISGEWSMQVTKALLAAVGSDEFLLIKSGLIMFNKLIETFPLSQRERQMLMAKLSPMTDKTNEPRDDIRVPCT----RIVTQLDKQIKEAGPDSTPAGERAATAVAKA 5612
+ P L N + EVWN++ PY R+ LY W+ E Y K ++ E+ +I L+K ++ +N+K + +GK +H P F + +L Q++ YDN I+ + DS+K++ +L D + + +V+ L R G ++ W+ +LS+F G + +K+N + LL + L + +L+EV+ K G++ + +T Q++ GGE+L+ E A + S +R T+KS L++ + + ++ L +L A Q +LY R + HLK++G D+ TL+Q F+ S TK PS + +L +Y + VAF + RP+ + L+ P K + ++ EAV++ + + AS+ L V ++ + ++ FW+L++ D+++P + Y + ++ + + + A L+ + AA+ K E+ RY + ++ KL+ EK Q HV+RV +LK+ K + F R K+A E I L+ + PR +A +C+KF +T+H+++ NF++LL Y R F ++ ++ T+ EA G FL +LE W K A+F E GF V + ++ + + + + +W ++TKA++ + S +++ I++ LI+ K++ FP+ + RQ++ K+ + ++ R D+ + T ++ + I+E D GE++A+ +A
Sbjct: 493 ILPSLSYMECNCCIAEEVWNVVKLYPYQFRYCLYSRWKN---ETYKSHAKLLRKRGDEL---KKIKSLMKRVSKENIKPVGRSIGKLTHCAPGYFFDYMLMQIQIYDNLITPIVDSLKYL-TSLSYDVLGYCLVESLSSADREHFKHDGTSISLWLQSLSSFCGAIFKKYN-IELTGLLQYVANQLKAQKSLDLL---ILKEVVQKMAGIEAAE--EMTPQQLEAMAGGELLKGE-AGYFSQVRNTKKSSQRLKEALSEQNLAVALYLLMAQQRYCVLY---------RETEKSHLKLVGKLYDQCQDTLVQFGTFLNSTMSNEEYVTKMPSINKMLLEYHMHADVAFFLARPMFTHAINLRFEALRKADPNGKKMSASQKHQKYCEAVSE-IMGPIVASVKPLHPVKVWEDISPQFLVTFWSLTMYDLFVPVESYQREISKIRQLSQAA-----LDSKDMAASKGKKEQERYAA-------LSEKLHEEKKKQQEHVERVMARLKQEKDTWFLSRSAKAAKNETITQFLQLCLFPRCIFTATDAVYCAKFVHTIHSLKTANFSTLLCYDRLFCDITYSVTSCTENEANRYGRFLCAMLETVMRWHSEK--AVFEKECANYPGFVTKFRVSNQFSEANDHVD--YENYRHVCHKWHYKITKAMVVCLDSKDYVQIRNSLIILIKILPHFPVLLKLRQIIEKKIEKVREEEKNHRQDLFILATSYSGKLKAKAATMIREN--DFHQVGEKSASVAQEA 1207 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig104.60.23 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig104.60.23 >prot_P-littoralis_Contig104.60.23 ID=prot_P-littoralis_Contig104.60.23|Name=mRNA_P-littoralis_Contig104.60.23|organism=Pylaiella littoralis U1_48|type=polypeptide|length=2347bp MAREVDKLSRIYSVLTDEEIEAWVSSSEGGKGGQPPKLPSETVTEAFREAback to top mRNA from alignment at P-littoralis_Contig104:296762..339934+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig104.60.23 ID=mRNA_P-littoralis_Contig104.60.23|Name=mRNA_P-littoralis_Contig104.60.23|organism=Pylaiella littoralis U1_48|type=mRNA|length=43173bp|location=Sequence derived from alignment at P-littoralis_Contig104:296762..339934+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig104:296762..339934+ >mRNA_P-littoralis_Contig104.60.23 ID=mRNA_P-littoralis_Contig104.60.23|Name=mRNA_P-littoralis_Contig104.60.23|organism=Pylaiella littoralis U1_48|type=CDS|length=7041bp|location=Sequence derived from alignment at P-littoralis_Contig104:296762..339934+ (Pylaiella littoralis U1_48)back to top |