mRNA_P-littoralis_Contig104.37.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig104.37.1 vs. uniprot
Match: D8LD28_ECTSI (Cyclic nucleotide-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LD28_ECTSI) HSP 1 Score: 606 bits (1563), Expect = 2.230e-197 Identity = 346/521 (66.41%), Postives = 380/521 (72.94%), Query Frame = 3
Query: 633 MGRQAQQGT-RLWSGEGTIWNRLRVVMVKDRR---IPGLNATTNLSNQCGHLSFVILALAYLETDVLALRGYAASGIGLSILFQFYRAQPLWIPISWNGLFLAINASMIALLVRERSEAANLGNDPEQAKIFRDVFAPVELTPVDFVRLMDLAERRALPKGTPLSREGRLQEDVFLIVEGGAEVELEGAAVGHLEQEQFVGSMAFNRFMQASARAFAASSSAVGTAVGDTSPAVTTGSSNDSEKTSVPEHGEDDYKNDHLDDEDSGSYT----------------GXXXXXXVFEEAKEVALKVLRRDSIVGNMAQSLALDVDLEVDKHDGMGGTERSKTTVTATADVVVYAWDMHLLRAFIKRRPLAGAAFQKAVSADLIRKVDQSRRPEERYRLLLTEALDGGVITPIEKKKLHRYRDMHGISTVEHKELLREHDWREEEFEAGFQKGVVPRDGSKDFLKYEALVRRELANGEVQDKGRQNLRKFRARAGIDAHEHLVALEKQGWTADDYEVGCKGKAA 2135
MG + QQG RL GEG + +LR MVK+RR G TT SNQCGHLSFVILALAYLETDVLALR AASGIGLSILFQFYRAQPLWIPI WNG+FL IN SMI LL++E+SEAA++G+DPEQA+ F++VFAPVELTPVDFVRLMDLAERR + KGT LS EG+ QE+VFLIVEG AEVE E AAVGHLEQ+QFVGSMAFNRFMQASA TSP V T S+ VF+EAKEVAL VLRRDSIVG+MAQS D E D+ G G ERS TTVTAT DVV Y WDMHLLRAFIKRRPLAGAA Q A+SADL RKVDQSR PEERYRLLL EALDGGVITPIEKKKL RYRDMHGIS+ EH+ELL+EH+W +EEFEAGFQKGV PRDGSK FL YEAL+RRELA G+V+D GRQ+LR+FR RAGIDA EHL+ALEKQGWTADDYEVG KGKAA
Sbjct: 1 MGPEVQQGAARL--GEGGVLKQLRDAMVKERRPLQFMGCQTTTTASNQCGHLSFVILALAYLETDVLALRASAASGIGLSILFQFYRAQPLWIPIGWNGVFLLINVSMIGLLLKEKSEAAHIGDDPEQARTFQEVFAPVELTPVDFVRLMDLAERRLVAKGTHLSEEGQPQEEVFLIVEGAAEVEAESAAVGHLEQKQFVGSMAFNRFMQASASPTT------------TSPTVPTDISSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNVPGGGGVFKEAKEVALNVLRRDSIVGSMAQSFVADA--EGDRRHGGGQMERSATTVTATTDVVAYVWDMHLLRAFIKRRPLAGAALQNAISADLTRKVDQSRGPEERYRLLLAEALDGGVITPIEKKKLTRYRDMHGISSEEHRELLKEHEWTKEEFEAGFQKGVTPRDGSKHFLNYEALLRRELAKGKVEDDGRQSLREFRTRAGIDAQEHLIALEKQGWTADDYEVGAKGKAA 505
BLAST of mRNA_P-littoralis_Contig104.37.1 vs. uniprot
Match: A0A6H5KTM1_9PHAE (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTM1_9PHAE) HSP 1 Score: 421 bits (1082), Expect = 1.100e-126 Identity = 263/585 (44.96%), Postives = 346/585 (59.15%), Query Frame = 3
Query: 477 GIARSAMDARPTPMRASDKLLPTAGRLFTMAKLPP-TGARVMLCKEASLSAIAMGRQAQQGTRLWSGEGTIW---NRLRVVMVKDRR---IPGLNATTNLSNQCGHLSFVILALAYLETDVLALRGYAASGIGLSILFQFYRAQPLWIPISWNGLFLAINASMIALLVRERSEAANLGNDPEQAKIFRDVFAPVELTPVDFVRLMDLAERRALPKGTPLSREGRLQEDVFLIVEGGAEVELEGAAVGHLEQEQFVGSMAFNRFMQASARAFAASSSAVGTAVGDTSPAVTTGSSNDSEKTSVPEHGEDDYKNDHLDDEDSGSYTGXXXXXXVFEEAKEVALKVLRRDSIVGNMAQSLALDVDLEVDKHDGMGGTERSKTTVTATADVVVYAWDMHLLRAFIKRRPLAGAAFQKAVSADLIRKVDQSRRPEERYRLLLTEALDGGVITPIEKKKLHRYRDMHGISTVEHKELLREHDWREEEFEAGFQKGVVPRDGSKDFLKYEALVRRELANGEVQDKGRQNLRKFRARAGIDAHEHLVALEKQGWTADDYEVGCKGKAADLAED--SADRDDDAQREYR-HDTD 2201
G+ RS A + K P+A R + K P G R++L K+A ++ A+G+Q Q + + R M K+RR G++ T + + CGH+S IL+L YLETD L+LR +G GL++ F +YR PLWI I WN FLAINA++I + +E+ +A G DPEQA+I++D+F PV+L PV+F++LM A+RR + +G ++++GR E++FLIVEG A+V EG V LE FVGSMAFN F+Q S A S V D PA + SV G L D G G V + K V +LR DS+VGN+A SL DV VD+ +G E +K TVTAT+DVVVY WD H LRAF+KRRPL GA QKA+S D KV+QSR + +YR+LL E L+GG I EK+KL RYR+ HGI+ EH +L E W EEEF+ GFQ GV PR GS+ F+KYEALV+RELA GEV+ + + L FR AGIDA EH++AL KQGWT DDYEVG KG ++ +D S D DD Q+ HD D
Sbjct: 32 GLVRSCPGATGGAFTVAAK--PSAWRQLSTGKPPKLAGGRLLLPKQAPCASSAVGQQQQAEVEIEKYGDVLLLAQESFRKEMTKERRPLQFVGIDTATTIGSVCGHISLGILSLGYLETDALSLRELVVAGSGLNLFFSYYRTPPLWISIKWNLFFLAINAALIGAMWKEKDDAEEFGKDPEQARIYQDIFMPVDLNPVEFMQLMGQAQRRVVLEGNDINQQGRPHEEMFLIVEGTADVRSEGEDVCRLEPGGFVGSMAFNAFIQESPLA---SYHTVARGAADALPAGGGAGDGKDQADSVFIEG--------LVVRDGGYKYGGKG---VLDLVKGVIFHMLRGDSVVGNVALSLVPDV---VDRSKDLGEMECAKNTVTATSDVVVYVWDQHALRAFLKRRPLIGAGLQKAISEDFSNKVNQSRGHKTKYRMLLEETLEGGKINQTEKRKLQRYRETHGIALEEHNFILAERGWTEEEFDVGFQPGVAPRQGSQHFVKYEALVQRELAKGEVKPESKLFLLNFRRHAGIDAQEHILALGKQGWTVDDYEVGVKGMSSTFNQDFGSFDGSDDVQQGINSHDND 597
BLAST of mRNA_P-littoralis_Contig104.37.1 vs. uniprot
Match: D8LD36_ECTSI (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD36_ECTSI) HSP 1 Score: 421 bits (1081), Expect = 6.580e-126 Identity = 243/481 (50.52%), Postives = 305/481 (63.41%), Query Frame = 3
Query: 696 LRVVMVKDRR---IPGLNATTNLSNQCGHLSFVILALAYLETDVLALRGYAASGIGLSILFQFYRA--QPLWIPISWNGLFLAINASMIALLVRERSEAANLGNDPEQAKIFRDVFAPVELTPVDFVRLMDLAERRALPKGTPLSREGRLQEDVFLIVEGGAEVELEGAAVGHLEQEQFVGSMAFNRFMQASARAFAASSSAVGTAVGDTSPAVTTGSSNDSEKTSVPEHGEDDYKNDHLDDEDSGSYTGXXXXXXVFEEAKEVALKVLRRD-SIVGNMAQSLALDVDLEVDKHDGMGGTERSKTTVTATADVVVYAWDMHLLRAFIKRRPLAGAAFQKAVSADLIRKVDQSRRPEERYRLLLTEALDGGVITPIEKKKLHRYRDMHGISTVEHKELLREHDWREEEFEAGFQKGVVPRDGSKD-FLKYEALVRRELANGEVQDKGRQNLRKFRARAGIDAHEHLVALEKQGWTADDYEVG 2117
L +M+KDRR G++ TN + CGHLSF IL AYLETDVL LR SG L+I+F +R P+WIPI WN FLA+NA+M+ LL+ ER EA LG DPEQA+IFR++F P +L+PV F+RLMD+AERR + KG L++EGR E+VFLIVEG AEV+ EG V HL FVGSMAFNRF++ SP TS + GE SY +F +A EV L LR+ SIVG + Q+ D + G ERS T+TAT+DVV Y WDMH+LR F+KRRP+ GA+ QKA+S DL KV+QSR +E YR LL EALDGG +T E++ L RYR H IS EH+E L+EH W EE+FEAGFQ+ P+D SK+ FLKYEAL++ EL GEV+ + R NLRKFR++AGIDA EHL+A+EKQGWTAD+YE+G
Sbjct: 88 LHPIMIKDRRPLEFLGISTVTNAGSLCGHLSFAILTAAYLETDVLTLRVLVLSGSTLNIMFNMFRVVGPPVWIPIKWNVGFLALNAAMVWLLMNEREEAEELGKDPEQARIFREIFMPTQLSPVHFLRLMDVAERRVMLKGNDLNQEGRPHEEVFLIVEGTAEVKSEGVVVCHLASGGFVGSMAFNRFIKTP------------------SP------------TSTKKAGE-----------GGSSYR----EGGIFTQAWEVFLYQLRKQGSIVGEVGQTFVGD---NTSRRQDKSGMERSSNTITATSDVVAYVWDMHVLREFVKRRPMIGASLQKAISVDLANKVNQSRDHKEHYRQLLAEALDGGRVTSTERRNLQRYRGGHRISVAEHRERLKEHGWTEEDFEAGFQELAAPKDMSKENFLKYEALLKSELDTGEVKPEARSNLRKFRSQAGIDAQEHLLAIEKQGWTADEYEIG 520
BLAST of mRNA_P-littoralis_Contig104.37.1 vs. uniprot
Match: D8LD37_ECTSI (Cyclic nucleotide-binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD37_ECTSI) HSP 1 Score: 407 bits (1046), Expect = 1.400e-123 Identity = 259/588 (44.05%), Postives = 338/588 (57.48%), Query Frame = 3
Query: 387 MASVRKVSYGRVLLRISSGGGGIRSPLRGNGIARSAMDARPTPMRASDKLLPTAGRLFTMAKLPPTGARVMLCKEASLSAIAMGRQAQQGTRLWSGEGTIWNRLRVVMVKDRR------IPGLNATTNLSNQCGHLSFVILALAYLETDVLALRGYAASGIGLSILFQFYRA--QPLWIPISWNGLFLAINASMIALLVRERSEAANLGNDPEQAKIFRDVFAPVELTPVDFVRLMDLAERRALPKGTPLSREGRLQEDVFLIVEGGAEVELEGAAVGHLEQEQFVGSMAFNRFMQASARAFAASSSAVGTAVGDTSPAVTTGSSNDSEKTSVPEHGEDDYKNDHLDDEDSGSYTGXXXXXXVFEEAKEVALKVLRRD-SIVGNMAQSLALDVDLEVDKHDGMGGTERSKTTVTATADVVVYAWDMHLLRAFIKRRPLAGAAFQKAVSADLIRKVDQSRRPEERYRLLLTEALDGGVITPIEKKKLHRYRDMHGISTVEHKELLREHDWREEEFEAGFQKGVVPRDGSKDFLKYEALVRRELANGEVQDKGRQNLRKFRARAGIDAHEHLVALEKQGWTADDYEVGCK 2123
M SV +VS GR R++ + R + A+ + +R + P + L ++AK P L + + SA+A + + NRL +M+++RR I LN TN CGH SF +L LAYLETDVL LR A G L+++F +R P+WIPI WN FL +N M+ LL+ ER EA L DPEQA+I+ D+F V L+PV F+RLMD+AERR +PKG L G ++V LI+EG AEV+ EG AV H+E+ F+GSMAF R S+K SV + DD H +D G +F +A E L LRRD S+VG +AQ++ D L+ + D MG ERS +TVTAT+DVVVY WD H LR FIKRRP+ GA QKA++ DL+ KVDQSR E YR LL E LDGG +T E+K L RYR+ HGIS EH + LR++ W EEEFEAGFQ GV +++FL+YEAL+R+ELA G+V+ R NLRKFR++ GIDA EHL+A+EKQGWTADDYE G K
Sbjct: 1 MISVARVSAGRTASRLARQQRHVVPSARIALVRAEALGLEGSSIRLNS---PASRALVSVAKPPK-----QLAEGRTFSAVAPKPMVTMIPWVPPPFQPLMNRLHPIMIRERRPMAWCGIEALNTVTNAGALCGHFSFALLTLAYLETDVLKLRYLVACGSTLNVMFNLFRVVGPPVWIPIKWNAGFLLLNTIMVILLMNERQEADRLKEDPEQARIYHDIFESVNLSPVQFLRLMDVAERRVVPKGANLKDGGAPHKEVILIIEGTAEVKSEGVAVSHMEKGGFIGSMAFMRL---------------------------------SKKLSVAKLASDDG---HYVYKDGG----------MFRKAWEAVLGQLRRDGSVVGEVAQAVVGDKTLK--RQDTMG-LERSMSTVTATSDVVVYVWDQHALREFIKRRPMIGAFLQKAITVDLVNKVDQSRDHHEHYRQLLAETLDGGRVTSTERKNLQRYREGHGISFDEHLDRLRDNKWTEEEFEAGFQMGVA----TQNFLEYEALLRKELAKGKVKPDARSNLRKFRSQVGIDAQEHLIAVEKQGWTADDYEAGAK 527
BLAST of mRNA_P-littoralis_Contig104.37.1 vs. uniprot
Match: D7FN16_ECTSI (Cyclic nucleotide-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN16_ECTSI) HSP 1 Score: 397 bits (1019), Expect = 1.890e-119 Identity = 246/526 (46.77%), Postives = 313/526 (59.51%), Query Frame = 3
Query: 585 GARVMLCKEA-----SLSAIAMGRQAQQGTRLWSGEGTIWNRLRVVMVKDR---RIPGLNATTNLSNQCGHLSFVILALAYLETDVLALRGYAASGIGLSILFQFYRAQPLWIPISWNGLFLAINASMIALLVRERSEAANLGNDPEQAKIFRDVFAPVELTPVDFVRLMDLAERRALPKGTPLSREGRLQEDVFLIVEGGAEVELEGAAVGHLEQEQFVGSMAFNRFMQASARAFAASSSAVGTAVGDTSPAVTTGSS-NDSEKTSVPEHGEDDYKNDHLDDEDSGSYTGXXXXXXVFEEAKEVALKVLRRDSIVGNMAQSLALDV-DLEVDKHDGMGGTERSKTTVTATADVVVYAWDMHLLRAFIKRRPLAGAAFQKAVSADLIRKVDQSRRPEERYRLLLTEALDGGVITPIEKKKLHRYRDMHGISTVEHKELLREHDWREEEFEAGFQKGVVPRDGSKDFLKYEALVRRELANGEVQDKGRQNLRKFRARAGIDAHEHLVALEKQGWTADDYEVGCKGKA 2132
G+R+ + K A LSA+ G Q T +V M +R + GLN TT + CGH SF I L YLETD L R +G L + F +YR PL I I W L L +N+ ++A+L ER+EA L NDPE+++IF ++F P +L PV+F+RLMDLA+RR KG + + GR ED+FLIVEG AEV+ EG V HLE F+GSMAF RF Q + A D +P V ++ N S+ + D + E+ S G + KE L +R+D I+G +A+SL DV + V + D ERSKTTVTAT+DVV YAWDMH L AF+KRRPL GA+ QKA++ D I KV QSR EERYRLLL E+LD G I PI ++KL RYR+ H IS HK L+E W EEE+ GFQ+ PRDGS FL+YEALV REL+ GEV + R NLRKFR++A IDA EHL+A++KQGWTADDYE G KG A
Sbjct: 41 GSRLAVMKPARASSRQLSAVPKGEAEQAETVFERQVREAKADFKVFMTTERQPLKFAGLNFTTTIGMLCGHASFGIATLVYLETDPLTTRVMVFTGATLGLFFSYYRHPPLIISIKWLTLTLILNSFLLAILWNERAEAEELNNDPEKSRIFEELFMPFDLNPVEFLRLMDLADRRVWMKGNDICQAGRPHEDMFLIVEGTAEVKSEGETVSHLEPGGFIGSMAFQRFTQEAE------------APVDVTPEVVRRNTINSSDFVYI----------DSIILENGSSVYGGGDGRSTRKIVKEAFLHFMRQDHIIGKVARSLVSDVMGMRVHEDD----MERSKTTVTATSDVVTYAWDMHELHAFLKRRPLIGASLQKAMAEDFINKVYQSRGHEERYRLLLVESLDPGSINPIGREKLRRYRETHHISEEVHKGFLKEQGWTEEEYYMGFQQNKAPRDGSARFLEYEALVSRELSGGEVTPEARSNLRKFRSQAHIDAQEHLLAIQKQGWTADDYEAGEKGAA 540
BLAST of mRNA_P-littoralis_Contig104.37.1 vs. uniprot
Match: D8LD27_ECTSI (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD27_ECTSI) HSP 1 Score: 333 bits (854), Expect = 1.670e-97 Identity = 208/424 (49.06%), Postives = 262/424 (61.79%), Query Frame = 3
Query: 960 RERSEAANLGNDPEQAKIFRDVFAPVELTPVDFVRLMDLAERRALPKGTPLSREGRLQEDVFLIVEGGAEVELEGAAVGHLEQEQFVGSMAFNRFMQASARAFAASSSAVGTAVGDTSPAVTTGSSNDSEKTSVPEHGEDDYKNDHLDDEDSGSYTGXXXXXXVFEEAKEVALKVLRRDSIVGNMAQSLALDVDLEVDKHDGMGGTERSKTTVTATADVVVYAWDMHLLRAFIKRRPLAGAAFQKAVSADLIRKVDQSRRPEERYRLLLTEALDGGVITPIEKKKLHRYRDMHGISTVEHKELLREHDWREEEFEAGFQKGVVPRDGSKDFLKYEALVRRELANGEVQDKGRQNLRKFRARAGIDAHEHLVALEKQGWTADDYEVGCKGKAADLAED---SADRDDDAQRE-YRHDTDDDDSST 2219
+E+ +A G DPEQA+I++D+F PV+L PV+F++LM A+RR + +G ++++GR E++FLIVEG A+V EG V LE FVGSMAFN F+Q A ASS D PA S + SV G L D G G V + K+V +LR DS+VGN+A SL DV VD +G E +K TVTAT+DVVVY WD H LRAFIKRRPL GA QKA+S D KV+QSR + +YR+LL E L+GG I EK+KL RYR+ HGI+ EHK +L E W EEEFE GFQ GV PR GS+ F+KYEALV+RELA GEV+ + + L FR AGIDA EH++AL KQGWT DDYEVG KG ++ +D S D DD + HD D DS+T
Sbjct: 3 KEKEDAEEFGKDPEQARIYQDIFMPVDLNPVEFMQLMGQAQRRVVLEGNDINQQGRPHEEMFLIVEGTADVRSEGEDVCRLEPGGFVGSMAFNAFIQ---EAPVASSHTAARGTADAWPAGGGRSDGKDQADSVFIEG--------LVVGDGGYKYGGKG---VLDLVKDVIFNMLRGDSVVGNVALSLVPDV---VDGPKDLGKMECTKNTVTATSDVVVYVWDQHALRAFIKRRPLIGAGLQKAISEDFSNKVNQSRGHKTKYRMLLEETLEGGEINQTEKRKLQRYRETHGIALEEHKFMLSERGWTEEEFEVGFQPGVAPRQGSQHFVKYEALVQRELAQGEVKPESKLYLLNFRKHAGIDAQEHILALGKQGWTVDDYEVGVKGMSSAFNQDLNGSFDGSDDVHPGIHSHDNDKSDSNT 409
BLAST of mRNA_P-littoralis_Contig104.37.1 vs. uniprot
Match: D8LD39_ECTSI (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD39_ECTSI) HSP 1 Score: 289 bits (740), Expect = 2.700e-82 Identity = 169/351 (48.15%), Postives = 215/351 (61.25%), Query Frame = 3
Query: 1068 MDLAERRALPKGTPLSREGRLQEDVFLIVEGGAEVELEGAAVGHLEQEQFVGSMAFNRFMQASARAFAASSSAVGTAVGDTSPAVTTGSSNDSEKTSVPEHGEDDYKNDHLDDEDSGSYTGXXXXXXVFEEAKEVALKVLRRD-SIVGNMAQSLALDVDLEVDKHDGMGGTERSKTTVTATADVVVYAWDMHLLRAFIKRRPLAGAAFQKAVSADLIRKVDQSRRPEERYRLLLTEALDGGVITPIEKKKLHRYRDMHGISTVEHKELLREHDWREEEFEAGFQKGVVPRDGSKDFLKYEALVRRELANGEVQDKGRQNLRKFRARAGIDAHEHLVALEKQGWTADDYEVG 2117
MD AERR + KG L +EGR E+VFLIVEG AEV EG AV HL+ FVGSMAFNRF++ KT+ H + + H D G +F +A + L LR+ S+VG + QS+ D + K ERS TTVTA++DVVVY WD H LR FIKRRP+ GA QKA+S DL+ KV QSR +E YR LL E LDGG +T E+K L RYR+ HGIS EH E L+E++W +EF+AGF++GV P+D S++FLKYEAL+R+ELA GE+ + + NLRKFR++ GIDA EHL+A+EKQGWTAD+YE G
Sbjct: 1 MDAAERRVMLKGNDLIQEGRPHEEVFLIVEGQAEVRSEGVAVSHLQSGGFVGSMAFNRFIK---------------------------------KTTANPHSD---REGHYVYNDGG----------MFRKAWQAILAQLRKQGSVVGEVTQSIVGD---QKSKRQEKSALERSTTTVTASSDVVVYVWDQHALREFIKRRPMIGACLQKAISVDLVNKVVQSRDHKEHYRQLLAETLDGGRVTSTERKNLQRYREGHGISMAEHFERLKENNWTHKEFQAGFREGVAPKDLSENFLKYEALLRKELAKGELNPEAKSNLRKFRSQKGIDAQEHLIAVEKQGWTADEYEAG 302
BLAST of mRNA_P-littoralis_Contig104.37.1 vs. uniprot
Match: A0A835ZD23_9STRA (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD23_9STRA) HSP 1 Score: 288 bits (738), Expect = 2.080e-81 Identity = 183/486 (37.65%), Postives = 260/486 (53.50%), Query Frame = 3
Query: 735 LNATTNLSNQCGHLSFVILALAYLETDVLALRGYAASGIGLSILFQFYRAQPLWIPISWNGLFLAINASMIALLVRERSEAANLGNDPEQAKIFRDVFAPVELTPVDFVRLMDLAERRALPKGTPLSREGRLQEDVFLIVEGGAEVEL-EGAAVGHLEQEQFVGSMAFNRFMQASARAFAASSSAVGTAVGDTSPAVTTGSSNDSEKTSVPEHGEDDYKNDHLDDEDSGSYTGXXXXXXVFEEAKEVALKVLRRDSIVGNMAQSLALDVDLEVDKHDGMGGTERSKT---------------------TVTATADVVVYAWDMHLLRAFIKRRPLAGAAFQKAVSADLIRKVDQSRRPEER---YRLLLTEALDGGVITPIEKKKLHRYRDMHGISTVEHKELLREHDWREEEFEAGFQKGVVPRDGSKDFLKYEALVRRELANGEVQDKGRQNLRKFRARAGIDAHEHLVALEKQGWTADDYEVG 2117
L+ TN SN CGH SF++LAL Y+E+DVL LR ++A GI LS+LFQ+YR QPLWIPISWN +FL IN MIALLV ER +A L + E+ ++F +FA + L+ V+F+ L+ LAER LP GT L+ Q+ V+LI++G AEV+ +G +GH+ QFVGSMAF RF+ V EH D +N R +V ++ +LA ++D E + + G + T V AT + VYAWD HLLRA++KR PL G A Q +SADL RK+DQSR P R YR LL AL GG + P EK+KL R+R+ H I+ EH +L + W + ++E G+Q+ + + F YE ++++EL G + + GR LR++R+++ I+ +HL+A+ K GWT + YE+G
Sbjct: 22 LSFKTNWSNLCGHGSFLMLALGYMESDVLLLRVFSAGGIVLSVLFQYYRPQPLWIPISWNTIFLLINGGMIALLVNERRQATRL-DSTEERELFDQMFAKLGLSAVEFLHLIRLAERETLPAGTTLATFNEPQDKVYLIIDGTAEVQGGDGDLIGHISNFQFVGSMAFLRFLN-----------------------------------EVQEHERD--RN--------------------------------RERQVVSSLLAALANELDPEHWEIEPDGTVVATATMAVDPHMPHSLHPFSWCVCMYAVRATTECHVYAWDFHLLRAYLKRHPLEGNAMQVTISADLTRKLDQSRDPHIRQVEYRQLLLTALSGGELLPTEKRKLQRFRENHDITLAEHDAMLAQLGWTKPDYETGYQQKAI----TASFAAYERMLQQELRGGTLNEDGRARLRRYRSQSNINPQQHLLAIAKLGWTYEQYEMG 433
BLAST of mRNA_P-littoralis_Contig104.37.1 vs. uniprot
Match: A0A6H5JW21_9PHAE (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW21_9PHAE) HSP 1 Score: 276 bits (705), Expect = 1.510e-75 Identity = 179/445 (40.22%), Postives = 235/445 (52.81%), Query Frame = 3
Query: 1002 QAKIFRDVFAPVELTPVDFVRLMDLAERRALPKGTPLSREGRLQEDVFLIVEGGAEVELEGAAVGHLEQEQFVGSMAFNRFMQASARAFAASSSAVGTAVGDTSPAVTTGSSNDSEKTSVPEHGEDDYKNDHLDDEDSGSYTGXXXXXXVFEEAKEVALKVLRRD-SIVGNMAQSLALDVDLEVDKHDGMGGTERSKTTVTATADVVVYAWDMHLLRAFIKRRPLAGAAFQKAVSADLIRKVDQSRRPEERYRLLLTEALDGGVITPIEKKKLHR-----------------------YRDMHGISTVEHKELLREHDWREEEFEAGFQKGVVPRDGSKDFLKYEALVRRELANGE-------------------------------------------------VQDKGRQNLRKFRARAGIDAHEHLVALEKQGWTADDYEVG 2117
QA+I+R++F V+L+PV F+RLMD AERR + KG L ++GR E++FLIVEG AEV EG AV HL+ FVGSMAFNRF++ KT+ H + + H +D G +F +A E L LR+ S+VG + QS+ D + K ERS TTVTAT+D+VVY WD H LR FIKRRP+ GA+ QKA+S DL+ KV QSR +E YR LL E LDGG +T E+K L R YR+ HGIS EH + L+E++W +EF+AGF++GV P+D S++FLKYEAL+R ELA GE + + + NLRKFR++ GIDA EHL+A+EKQGWTAD+YE G
Sbjct: 51 QARIYREIFERVQLSPVHFLRLMDAAERRVVLKGNDLIQDGRPHEEMFLIVEGQAEVRSEGVAVSHLQSGGFVGSMAFNRFIK---------------------------------KTTSNPHAD---REGHYVYKDGG----------MFRKAWEAILAQLRKQGSVVGEVTQSIVGD---QKSKRQEKSALERSTTTVTATSDMVVYVWDQHALREFIKRRPMIGASLQKAISVDLVNKVVQSRDHKEHYRQLLAETLDGGRVTSTERKNLQRWVKGRKDGGKVSLLGGCTCDGRWYREGHGISMAEHFQRLKENNWTHKEFQAGFREGVAPKDLSENFLKYEALLRNELAKGEYHFCAFFFCCVFVIASSCCNEPPRSPSYRQFASCLVLVSFSPNGFDDDQLNPEAKSNLRKFRSQKGIDAQEHLIAVEKQGWTADEYEAG 446
BLAST of mRNA_P-littoralis_Contig104.37.1 vs. uniprot
Match: A0A835YLU4_9STRA (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLU4_9STRA) HSP 1 Score: 273 bits (699), Expect = 3.520e-75 Identity = 194/542 (35.79%), Postives = 269/542 (49.63%), Query Frame = 3
Query: 690 NRLRVVMVKDR---------RIPGLNATTNLSNQCGHLSFVILALAYLETDVLALRGYAASGIGLSILFQFYRAQPLWIPISWNGLFLAINASMIALLVRERSEAANLGNDPEQAKIFRDVFAPVELTPVDFVRLMDLAERRALPKGTPLSREGRLQEDVFLIVEGGAEV-----------ELEGAAVGHLE---------------------------------QEQFVGSMAFNRFMQA---------SARAFAASSSAVGTAVGDTSPAVTTGSSNDSEKTSVPEHGEDDYKNDHLDDEDSGSYTGXXXXXXVFEEAKEVALKVLRRDSIVGNMAQSLALDVDLEVDKHDGMGGTERS----KTTVTATADVVVYAWDMHLLRAFIKRRPLAGAAFQKAVSADLIRKVDQSRRPEERYRLLLTEALDGGVITPIEKKKLHRYRDMHGISTVEHKELLREHDWREEEFEAGFQKGVVPRDGSKDFLKYEALVRRELANGEVQDKGRQNLRKFRARAGIDAHEHLVALEKQGWTADDYEVG 2117
N L MVK+R +P L+ TTN SN CGH SF++LAL Y+E+DV+ LR ++A GI LS+LFQ+YR QPLWIPISWN LFL IN MIA L+ ER +A +L +D E+ ++ ++F + L+ V+ + +M LAE++ LP GT ++ G+ + +LI +G + + +G + L + QFVGSMAF RF+ + RA S A A D PEH E D G E V Q +A E + D +E S TTV T + V+AWD HLLRA++K PL G A Q +SADL RK+DQSR P RYR LL AL GG + P EK KL YR+ HGI+T EH+E+L + W ++ G+Q+ + + F YE L+ +EL NG + ++GR LR+FR+++ IDA +HL+AL K GWT + YE+G
Sbjct: 46 NSLSAAMVKERVLTLPLALSTLPPLSLTTNFSNICGHGSFLMLALGYMESDVMMLRVFSAGGIVLSVLFQYYRPQPLWIPISWNTLFLLINGGMIAALISERRKADHL-DDAEERAVYEEMFCKLGLSAVELMHVMRLAEQQILPAGTTIAACGQPLDKPYLITDGTVGLXXXXXXXXXVTDHDGDPISSLACSSRLQSSTAXXXXXXXXXXXXXXXXXXXXXXTRHQFVGSMAFLRFLNTVHDHERDRDNERAVLNSLLAALAAELD------------------PEHWEIDP---------DGRVVAVAAPHG--EGQGGVQAGXXXXXXXXXXQQQGVAAVAAGEAAQEDEQEESEESLCISSTTVRTTTECRVFAWDFHLLRAYLKTHPLEGNAMQVTISADLTRKLDQSRDPHIRYRQLLLTALGGGEVLPCEKNKLQHYREAHGITTEEHEEMLLDLGWTRSDYTTGYQRKAI----TSAFAAYEDLLHQELKNGRLNEEGRARLRRFRSQSNIDATKHLLALAKLGWTYEQYEMG 553 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig104.37.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig104.37.1 >prot_P-littoralis_Contig104.37.1 ID=prot_P-littoralis_Contig104.37.1|Name=mRNA_P-littoralis_Contig104.37.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=712bp MASVRKVSYGRVLLRISSGGGGIRSPLRGNGIARSAMDARPTPMRASDKLback to top mRNA from alignment at P-littoralis_Contig104:168092..180601- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig104.37.1 ID=mRNA_P-littoralis_Contig104.37.1|Name=mRNA_P-littoralis_Contig104.37.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=12510bp|location=Sequence derived from alignment at P-littoralis_Contig104:168092..180601- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig104:168092..180601- >mRNA_P-littoralis_Contig104.37.1 ID=mRNA_P-littoralis_Contig104.37.1|Name=mRNA_P-littoralis_Contig104.37.1|organism=Pylaiella littoralis U1_48|type=CDS|length=2136bp|location=Sequence derived from alignment at P-littoralis_Contig104:168092..180601- (Pylaiella littoralis U1_48)back to top |