mRNA_P-littoralis_Contig1033.31.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1033.31.1 vs. uniprot
Match: A0A6H5K630_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K630_9PHAE) HSP 1 Score: 110 bits (274), Expect = 3.300e-29 Identity = 58/88 (65.91%), Postives = 69/88 (78.41%), Query Frame = 1
Query: 1 AKERAARGDLNRSLHGRSRANHNRNARRGQDYIASGYRARIMLPITEGERSATMRPSSWNTPAAVLFPRYISYDRPRAAPVVEGSASQ 264
AKERAARGDLNR L G SRANHNR +R+G D+IASG R +I+LP+T+ ERSATMR S N +AV+F RY+S +PRA P VEG ASQ
Sbjct: 16 AKERAARGDLNRGLRGGSRANHNRTSRKGSDFIASGVRGQIILPVTDEERSATMRAPSRNPASAVMFSRYLSVVKPRADPTVEGGASQ 103
BLAST of mRNA_P-littoralis_Contig1033.31.1 vs. uniprot
Match: A0A6H5K5X1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5X1_9PHAE) HSP 1 Score: 118 bits (296), Expect = 3.590e-29 Identity = 62/88 (70.45%), Postives = 72/88 (81.82%), Query Frame = 1
Query: 1 AKERAARGDLNRSLHGRSRANHNRNARRGQDYIASGYRARIMLPITEGERSATMRPSSWNTPAAVLFPRYISYDRPRAAPVVEGSASQ 264
AKERA RGDL RSLHG SRA HN+NAR+G+D+IASG R RI+LP+T+ ERSATMR S N +AV+FPRYIS D+P A PVV GSASQ
Sbjct: 554 AKERAERGDLQRSLHGVSRAKHNQNARKGEDFIASGIRGRIILPVTDAERSATMRAPSKNPASAVMFPRYISIDKPHADPVVGGSASQ 641
BLAST of mRNA_P-littoralis_Contig1033.31.1 vs. uniprot
Match: A0A6H5KB63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB63_9PHAE) HSP 1 Score: 108 bits (270), Expect = 5.020e-29 Identity = 55/76 (72.37%), Postives = 64/76 (84.21%), Query Frame = 1
Query: 1 AKERAARGDLNRSLHGRSRANHNRNARRGQDYIASGYRARIMLPITEGERSATMRPSSWNTPAAVLFPRYISYDRP 228
AKER ARGDL RSLHG SRANHN+NAR+G+D+IASG R RIMLP+T+ ERSATMR S N +AV+FPRYIS D+P
Sbjct: 16 AKERTARGDLQRSLHGVSRANHNKNARKGEDFIASGIRGRIMLPVTDAERSATMRAPSRNPVSAVMFPRYISIDKP 91
BLAST of mRNA_P-littoralis_Contig1033.31.1 vs. uniprot
Match: A0A6H5KZP5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZP5_9PHAE) HSP 1 Score: 105 bits (262), Expect = 1.520e-26 Identity = 53/80 (66.25%), Postives = 64/80 (80.00%), Query Frame = 1
Query: 25 DLNRSLHGRSRANHNRNARRGQDYIASGYRARIMLPITEGERSATMRPSSWNTPAAVLFPRYISYDRPRAAPVVEGSASQ 264
DLNR LHG SRANHNR +R+G D+IASG R +I+LP+T+ ERSATMR S N +AV+FPRY+S +PRA P VEGSASQ
Sbjct: 89 DLNRGLHGGSRANHNRTSRKGNDFIASGVRGQIILPVTDEERSATMRAPSRNPASAVMFPRYLSVVKPRADPTVEGSASQ 168
BLAST of mRNA_P-littoralis_Contig1033.31.1 vs. uniprot
Match: A0A6H5JS87_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS87_9PHAE) HSP 1 Score: 103 bits (258), Expect = 2.080e-26 Identity = 53/76 (69.74%), Postives = 64/76 (84.21%), Query Frame = 1
Query: 1 AKERAARGDLNRSLHGRSRANHNRNARRGQDYIASGYRARIMLPITEGERSATMRPSSWNTPAAVLFPRYISYDRP 228
AKERAARGDL RSLHG SRANHN+N R+G+++IASG R RIMLP+T+ ERSATMR S N+ +AV+FPRYIS +P
Sbjct: 81 AKERAARGDLYRSLHGVSRANHNKNERKGEEFIASGIRGRIMLPVTDAERSATMRAPSRNSVSAVMFPRYISIHKP 156
BLAST of mRNA_P-littoralis_Contig1033.31.1 vs. uniprot
Match: A0A6H5L2C2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2C2_9PHAE) HSP 1 Score: 97.4 bits (241), Expect = 9.980e-24 Identity = 50/76 (65.79%), Postives = 61/76 (80.26%), Query Frame = 1
Query: 1 AKERAARGDLNRSLHGRSRANHNRNARRGQDYIASGYRARIMLPITEGERSATMRPSSWNTPAAVLFPRYISYDRP 228
AKERAARGDLNR L G SRANHNR +R+G D+IASG R +I+LP+T+ ERSATMR S N +AV+FPRY+S +P
Sbjct: 91 AKERAARGDLNRGLQGGSRANHNRTSRKGNDFIASGVRGQIILPVTDEERSATMRAPSRNPASAVMFPRYLSVVKP 166
BLAST of mRNA_P-littoralis_Contig1033.31.1 vs. uniprot
Match: A0A6H5JR14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR14_9PHAE) HSP 1 Score: 97.8 bits (242), Expect = 7.830e-22 Identity = 51/86 (59.30%), Postives = 64/86 (74.42%), Query Frame = 1
Query: 1 AKERAARGDLNRSLHGRSRANHNRNARRGQDYIASGYRARIMLPITEGERSATMRPSSWNTPAAVLFPRYISYDRPRAAPVVEGSA 258
AKER ARGD+ R LHG RAN+NRNAR+G+D++ASGYRA +MLP+ EGERS +R + ++ AVL P YIS P A PV +GSA
Sbjct: 684 AKERGARGDILRGLHGPCRANYNRNARKGRDFVASGYRAEVMLPVGEGERSVRIRARTKDSDEAVLSPWYISVAAPGATPVADGSA 769
BLAST of mRNA_P-littoralis_Contig1033.31.1 vs. uniprot
Match: A0A6H5K6I9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6I9_9PHAE) HSP 1 Score: 94.7 bits (234), Expect = 3.430e-21 Identity = 52/83 (62.65%), Postives = 61/83 (73.49%), Query Frame = 1
Query: 1 AKERAARGDLNRSLHGRSRANHNRNARRGQDYIASGYRARIMLPITEGERSATMRPSSWNTPAAVLFPRYISYDRPRAAPVVE 249
AKER+ RGDLNR LHG SRAN NRNAR G D+I S YR+RIML +T+ E + +R S N+P AVL PRYIS + AAPVVE
Sbjct: 262 AKERSVRGDLNRGLHGGSRANFNRNARSGNDFIDSDYRSRIMLAVTQAEAAENVRARSRNSPNAVLCPRYISVEPLAAAPVVE 344
BLAST of mRNA_P-littoralis_Contig1033.31.1 vs. uniprot
Match: A0A6H5K731_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K731_9PHAE) HSP 1 Score: 88.6 bits (218), Expect = 9.520e-21 Identity = 44/68 (64.71%), Postives = 55/68 (80.88%), Query Frame = 1
Query: 43 HGRSRANHNRNARRGQDYIASGYRARIMLPITEGERSATMRPSSWNTPAAVLFPRYISYDRPRAAPVV 246
HG SRANH +NAR+G+D+IASG R RIMLP+++ ERSATMR S + +AV+FPRYIS D+P A PVV
Sbjct: 43 HGVSRANHIKNARKGEDFIASGIRGRIMLPVSDAERSATMRAPSRDPVSAVMFPRYISIDKPHADPVV 110
BLAST of mRNA_P-littoralis_Contig1033.31.1 vs. uniprot
Match: D7FZI2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZI2_ECTSI) HSP 1 Score: 89.0 bits (219), Expect = 1.020e-18 Identity = 50/85 (58.82%), Postives = 58/85 (68.24%), Query Frame = 1
Query: 1 AKERAARGDLNRSLHGRSRANHNRNARRGQDYIASGYRARIMLPITEGERSATMRPSSWNTPAAVLFPRYISYDRPRAAPVVEGS 255
AKER+ RGDLNR LHG SRAN NRNAR G D+ S YR RIML +T+ + +R S N+P AVL PRYIS + A PVVE S
Sbjct: 934 AKERSVRGDLNRGLHGGSRANFNRNARSGDDFNVSDYRGRIMLAVTQAVAAENVRSRSRNSPNAVLCPRYISVEPLAATPVVETS 1018 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1033.31.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1033.31.1 >prot_P-littoralis_Contig1033.31.1 ID=prot_P-littoralis_Contig1033.31.1|Name=mRNA_P-littoralis_Contig1033.31.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=88bp AKERAARGDLNRSLHGRSRANHNRNARRGQDYIASGYRARIMLPITEGERback to top mRNA from alignment at P-littoralis_Contig1033:77729..77992- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1033.31.1 ID=mRNA_P-littoralis_Contig1033.31.1|Name=mRNA_P-littoralis_Contig1033.31.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=264bp|location=Sequence derived from alignment at P-littoralis_Contig1033:77729..77992- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1033:77729..77992- >mRNA_P-littoralis_Contig1033.31.1 ID=mRNA_P-littoralis_Contig1033.31.1|Name=mRNA_P-littoralis_Contig1033.31.1|organism=Pylaiella littoralis U1_48|type=CDS|length=264bp|location=Sequence derived from alignment at P-littoralis_Contig1033:77729..77992- (Pylaiella littoralis U1_48)back to top |