mRNA_P-littoralis_Contig1033.13.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1033.13.1
Unique NamemRNA_P-littoralis_Contig1033.13.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1033.13.1 vs. uniprot
Match: A0A6H5KEH2_9PHAE (RNA-directed DNA polymerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEH2_9PHAE)

HSP 1 Score: 349 bits (896), Expect = 1.020e-93
Identity = 192/337 (56.97%), Postives = 221/337 (65.58%), Query Frame = -1
Query: 1726 DVSEVLSARGRFQDHAQPRS*Q-APPSRWTARSQS*PTLPGWLCSNETTPFWCRFEIS*GRKQASRNAG*SWGVLGGRKRYS-------SFVDVRGRNLIAIPQCMVADILALVHGLQGHAGVGATLSVVRDRFHWPKVV*DARQYVSSCGCTRRKRSTSRRVPMMQGRHAEPWDELIIDILAIDTESDSHNKCVLLVIDKATKFPFGFPLPSKQAIGVARKLVELCLTFGVPRMIRCDSGGEFRAEVVTHLCRWLKVDIAFGPTDHPRGQGTVERLGGWLTEVLAELCSAWPKRWDECVSQALWVKRTSPDASLHANMTSFELLFGR-PRARL*TL 2709
            D+ EVL+ARG     +   +   A     TAR     T P  L   +         +S  RK  S  A  S G    R RYS        + D +GR L AIP  MVADI+ALVH L GHAGVGATLS++RD FHWP +  D R YV SC C RRKR  SRRV MM GR  EPWDEL +DIL IDT S + N  VLLV+D+A+KFPFGFPL +KQA+GVAR +VELCLT+GVP+ +RCD G EF AEVV HLCRWL+  I FG  DHPRGQG VERLGGWL E+LAELC  WP RWDE VS A+W+KRT PD SL +NMT FELLFGR PR  L +L
Sbjct: 1256 DIGEVLAARGEVTTSSSSHALDGASAIDLTARVL---TRPSELAHRQRVDT----HLSQVRKVLSNVADSSQGGSE-RDRYSLGTDDVIRYNDGKGRKLPAIPVAMVADIIALVHTLHGHAGVGATLSLLRDHFHWPTMTNDTRHYVLSCACRRRKRPPSRRVAMMPGRPLEPWDELQMDILKIDTPSQTGNNYVLLVVDRASKFPFGFPLKTKQAVGVARVVVELCLTYGVPKTVRCDGGPEFGAEVVKHLCRWLRASIVFGAADHPRGQGAVERLGGWLQELLAELCRFWPDRWDEYVSPAMWIKRTLPDTSLPSNMTPFELLFGRKPRTSLDSL 1584          
BLAST of mRNA_P-littoralis_Contig1033.13.1 vs. uniprot
Match: A0A6H5JMP6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMP6_9PHAE)

HSP 1 Score: 314 bits (804), Expect = 2.130e-86
Identity = 163/309 (52.75%), Postives = 211/309 (68.28%), Query Frame = -3
Query:  833 FRTPPRTSLDSLVPATEQPNAPGGRDNFVEQRKQNLWEVRLALEKRHELSVASRARSNETIRRPSAGVTAEVGDLVLVREAPSTRHRDRSGRKLQHEFYTGPWRVKEVPLTGISVGVTMRGRKNRARSVSTEDIKQFHLRPLALRHSLSDEFAQFAWDRDFKTTSTALDPTPLVTLVDCRKVRSTTGRERWEYRGRTLAGEVPDWLAEDEVLKSFSPLQLDGFIALWHLYQPPSALTTAAVPAVPSRRIAALPRKQALDLYPIGTRIRKDFGSGLIQEGQVFDYKDRYWRIRYPSNDWEELNRTEMKRL 1759
            F   PRT+LDSLVP T++    GG DNFV++RKQNL EVR+ALE+RHEL VA+RA++N TI R SAGV      LVLVRE  S R+RDR GR+LQH+ YTGP +V +V   G+ V V++ GR+ R R VST D+K FHL P +LR S+SDEFA +AW  D K  S A +    V++ DCR+ RS T +  WEYRG+  +G V DWL+ED +L+SF+PLQLDGF+ALWHLY P  A     +P V  +  A L R +AL L+PI   +RK+   G+  +GQVFD+   YWR+ Y   +WEEL R E++RL
Sbjct:  569 FDRKPRTTLDSLVPLTDETGTEGGLDNFVKRRKQNLREVRIALERRHELRVAARAKANATIERSSAGVAVGRNSLVLVRETESRRYRDRRGRELQHDLYTGPSKVTDVIRPGLIVEVSLHGRRKRTRRVSTADVKPFHLSPPSLRLSISDEFAAYAWGADVKLPSGAAELLEFVSIADCRRSRSRT-QVVWEYRGKLGSGAVSDWLSEDVMLRSFTPLQLDGFVALWHLYHPQQAND---LPPVSVKPRAPLSRAEALKLFPIDFTLRKELDGGVNLQGQVFDFLQPYWRVGYSDQNWEELARRELERL 873          
BLAST of mRNA_P-littoralis_Contig1033.13.1 vs. uniprot
Match: A0A6H5JV25_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV25_9PHAE)

HSP 1 Score: 278 bits (711), Expect = 2.400e-80
Identity = 133/196 (67.86%), Postives = 151/196 (77.04%), Query Frame = -1
Query: 1726 DARQYVSSCGCTRRKRSTSRRVPMMQGRHAEPWDELIIDILAIDTESDSHNKCVLLVIDKATKFPFGFPLPSKQAIGVARKLVELCLTFGVPRMIRCDSGGEFRAEVVTHLCRWLKVDIAFGPTDHPRGQGTVERLGGWLTEVLAELCSAWPKRWDECVSQALWVKRTSPDASLHANMTSFELLFGR-PRARL*TL 2310
            D R  V SC C  RKR  SRRV MM GR  EPWDEL +DIL IDT S + N  VLLV+D+A+KFPFGFPL +KQA+GVAR  VELCLT+GVP+ +RCD G EF AEVV HLCRWL+ +I FG TDHPRGQG VERLGGWL E+LAELC +WP RWDE VS A+W+KRT PD SL +NMT FELLFGR PR  L +L
Sbjct:    4 DTRHCVLSCACRTRKRPPSRRVAMMSGRPLEPWDELQMDILKIDTPSQTGNNYVLLVVDRASKFPFGFPLKTKQAVGVARVAVELCLTYGVPKTVRCDGGPEFGAEVVKHLCRWLRANIVFGATDHPRGQGAVERLGGWLQELLAELCRSWPDRWDEYVSPAMWIKRTLPDTSLPSNMTPFELLFGRKPRTSLDSL 199          
BLAST of mRNA_P-littoralis_Contig1033.13.1 vs. uniprot
Match: A0A6H5KFK7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFK7_9PHAE)

HSP 1 Score: 259 bits (661), Expect = 3.280e-67
Identity = 146/272 (53.68%), Postives = 170/272 (62.50%), Query Frame = -1
Query: 1918 DVSEVLSARGRFQDHAQPRS*Q-APPSRWTARSQS*PTLPGWLCSNETTPFWCRFEIS*GRKQASRNAG*SWGVLGGRKRYS-------SFVDVRGRNLIAIPQCMVADILALVHGLQGHAGVGATLSVVRDRFHWPKVV*DARQYVSSCGCTRRKRSTSRRVPMMQGRHAEPWDELIIDILAIDTESDSHNKCVLLVIDKATKFPFGFPLPSKQAIGVARKLVELCLTFGVPRMIRCDSGGEFRAEVVTHLCRWLKVDIAFGPTDHPRGQG 2709
            D+ EVL+ARG     +   +   A     TAR     T P  L   +         +S  RK  S  A  S G    R RYS        + D +GR L AIP  MVADI+ALVH L GHAGVGATLS++RD FHWP +  D R YV SC C RRKR  SRRV MM GR  EPWDEL +DIL IDT S + N  V LV+D+A+KFPFGFPL +KQA+GVAR +VELCLT+GVP+ +RCD G EF AEVV HLCRWL+  I FG  DHPRGQG
Sbjct:  734 DIGEVLAARGEVTTSSSSHALDGASAIDLTARVL---TRPSELAHRQRVDT----HLSQVRKVLSNVADSSQGGSE-RDRYSLGTDDVIRYNDGKGRKLPAIPVAMVADIIALVHTLHGHAGVGATLSLLRDHFHWPTMTNDTRHYVLSCACRRRKRPPSRRVAMMPGRPLEPWDELQMDILKIDTPSQTGNNYVFLVVDRASKFPFGFPLKTKQAVGVARVVVELCLTYGVPKTVRCDGGPEFGAEVVKHLCRWLRASIVFGAADHPRGQG 997          
BLAST of mRNA_P-littoralis_Contig1033.13.1 vs. uniprot
Match: A0A6H5KNP4_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNP4_9PHAE)

HSP 1 Score: 255 bits (652), Expect = 1.070e-64
Identity = 119/241 (49.38%), Postives = 165/241 (68.46%), Query Frame = -1
Query: 1735 RGR-NLIAIPQCMVADILALVHGLQGHAGVGATLSVVRDRFHWPKVV*DARQYVSSCGCTRRKRSTSRRVPMMQGRHAEPWDELIIDILAIDTESDSHNKCVLLVIDKATKFPFGFPLPSKQAIGVARKLVELCLTFGVPRMIRCDSGGEFRAEVVTHLCRWLKVDIAFGPTDHPRGQGTVERLGGWLTEVLAELCSAWPKRWDECVSQALWVKRTSPDASLHANMTSFELLFGR-PRARL 2451
            RG+ + IA+P+ ++  +LAL HG   H G   T  ++  ++HWP +  D R+YV SC C  +KR  SR++ M+  R   PW  L +DIL   T +   N+ +L+V+D+ATKF FGFPLP+K+ +GV+RKL+EL L FG+P  IRCD G E  +E++ HLCRWLKV + FGP +HPRGQGTVER+G  L ++L+ELC AWP+RWDE V+ A W  R  PD SL  N++ +++LFGR PR  L
Sbjct: 1141 RGKLHAIALPRRLIPGVLALAHGTFAHPGRARTTIIIAGKYHWPSLKKDVRRYVESCRCRMKKRQWSRQLRMLPARFLLPWQVLELDILDTKTVTALGNRYLLVVVDRATKFLFGFPLPTKETVGVSRKLLELILIFGLPLSIRCDPGRENTSEIMEHLCRWLKVSLDFGPANHPRGQGTVERMGAVLAQLLSELCQAWPQRWDEYVAIATWAHRMQPDESLPGNVSPYQMLFGRAPRTPL 1381          
BLAST of mRNA_P-littoralis_Contig1033.13.1 vs. uniprot
Match: A0A6H5KZY5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZY5_9PHAE)

HSP 1 Score: 253 bits (645), Expect = 7.160e-64
Identity = 116/177 (65.54%), Postives = 138/177 (77.97%), Query Frame = -1
Query: 1753 GCTRRKRSTSRRVPMMQGRHAEPWDELIIDILAIDTESDSHNKCVLLVIDKATKFPFGFPLPSKQAIGVARKLVELCLTFGVPRMIRCDSGGEFRAEVVTHLCRWLKVDIAFGPTDHPRGQGTVERLGGWLTEVLAELCSAWPKRWDECVSQALWVKRTSPDASLHANMTSFELLFG 2283
            GC RRKR  SRRV M+ GR  EPWDEL +DIL IDT S + N  +LLV+D+A+KFP GFPL +KQA+GVAR +VELCLT+GVP+ +RCD G EF AEVV HLCRWL+ +I FG  DHPRGQG+VERLGGWL E+LA+LC +W  RWD  VS A+W+KRT PD SL +NMT FE L G
Sbjct: 1401 GCDRRKRPLSRRVAMVAGRPLEPWDELQMDILKIDTPSQTGNNYILLVVDRASKFPIGFPLETKQAVGVARVVVELCLTYGVPKTVRCDGGPEFGAEVVKHLCRWLRANIVFGAADHPRGQGSVERLGGWLQEMLAKLCRSWSDRWDVFVSPAMWIKRTLPDTSLPSNMTPFEFLNG 1577          
BLAST of mRNA_P-littoralis_Contig1033.13.1 vs. uniprot
Match: A0A6H5K9B2_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9B2_9PHAE)

HSP 1 Score: 241 bits (615), Expect = 2.880e-62
Identity = 111/170 (65.29%), Postives = 131/170 (77.06%), Query Frame = -1
Query: 1726 GRHAEPWDELIIDILAIDTESDSHNKCVLLVIDKATKFPFGFPLPSKQAIGVARKLVELCLTFGVPRMIRCDSGGEFRAEVVTHLCRWLKVDIAFGPTDHPRGQGTVERLGGWLTEVLAELCSAWPKRWDECVSQALWVKRTSPDASLHANMTSFELLFGR-PRARL*TL 2232
            GR  EPWDEL +DIL IDT S + N  +LLV+D+A+KFPFGFPL + QA+GVAR +VELCLT+GVP+ +RCD G EF A +V HLCRWL+ +I FG  DHPRGQG+VERLGGWL E+LAELC  WP RWDE VS A+W+KRT PD SL   MT FE LFGR PR  L +L
Sbjct:  632 GRPLEPWDELHMDILKIDTPSQTSNNHILLVVDRASKFPFGFPLETNQAVGVARVVVELCLTYGVPKTVRCDEGPEFGARLVKHLCRWLRANIVFGAADHPRGQGSVERLGGWLQELLAELCRPWPDRWDEYVSPAMWIKRTLPDTSLPTYMTPFEFLFGRKPRTSLDSL 801          
BLAST of mRNA_P-littoralis_Contig1033.13.1 vs. uniprot
Match: A0A6H5K3V4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3V4_9PHAE)

HSP 1 Score: 240 bits (613), Expect = 6.450e-60
Identity = 112/241 (46.47%), Postives = 162/241 (67.22%), Query Frame = -1
Query: 1735 RGR-NLIAIPQCMVADILALVHGLQGHAGVGATLSVVRDRFHWPKVV*DARQYVSSCGCTRRKRSTSRRVPMMQGRHAEPWDELIIDILAIDTESDSHNKCVLLVIDKATKFPFGFPLPSKQAIGVARKLVELCLTFGVPRMIRCDSGGEFRAEVVTHLCRWLKVDIAFGPTDHPRGQGTVERLGGWLTEVLAELCSAWPKRWDECVSQALWVKRTSPDASLHANMTSFELLFGR-PRARL 2451
            RG+ + IA+P+ ++  +LAL HG   H G   T  ++ D++HWP +    R+YV+SC C   KR +S ++ M+  R   PWD L +DIL + T ++S ++ +L+ +D+ATKF FGFPL +K+ +GV+RKL+ L L FG+P  IRCD G +  +E++ H CRWLKV + FGP +HPRGQGTVER+G  L ++L+ELC AWP+RW+E V+ A W  R   D SL  N +  ++LFGR PR  L
Sbjct: 1687 RGKLHAIALPRRLIPGVLALAHGTFAHPGSARTTIIIADKYHWPSLKKGVRRYVTSCRCRMSKRPSSAQLRMLPARFLRPWDVLELDILDMKTVANSGSRYLLVGVDRATKFLFGFPLKTKERVGVSRKLLGLLLIFGLPTSIRCDPGRDNTSEIMEHPCRWLKVSLDFGPANHPRGQGTVERMGAVLAQLLSELCQAWPRRWEEYVTVATWTHRMQQDESLPGNASPCQMLFGRSPRTPL 1927          
BLAST of mRNA_P-littoralis_Contig1033.13.1 vs. uniprot
Match: A0A6H5J7F8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7F8_9PHAE)

HSP 1 Score: 233 bits (593), Expect = 6.640e-58
Identity = 116/197 (58.88%), Postives = 138/197 (70.05%), Query Frame = -1
Query: 1687 RRKRSTSRRVPMMQGRHAEPWDELIIDILAIDTESDSHNKCVLLVIDKATKFPFGFPLPSKQAIGVARKLVELCLTFGVPRMIRCDSGGEFRAEVVTHLCRWLKVDIAFGPTDHPRGQGTVERLGGWLTEVLAELCSAWPKRWDECVSQALWVKRTSPDASLHANMTSFELLFGR-PRARL*TLWYLPQNSRTHPEG 2274
            RRKR  S+RV MM GR  EPW+EL +DIL ID  S + N  +LLV+D+A+KFPFGFPL +KQA+G AR LVELC TFGVPR I CD G  F AEVV H CRWL+ DI F   DHPRGQG VERL  WL E+LAELC +WP RWD+ +  ++W+K T PD  L ++MT FELLFGR P   L +L  +P    T  EG
Sbjct: 1070 RRKRPQSKRVAMMPGRPLEPWNELQMDILKIDKPSLTGNNYILLVVDRASKFPFGFPLETKQAVGAARVLVELCPTFGVPRTIHCDGGSGFGAEVVKHPCRWLRADIVFSGADHPRGQGAVERLREWLQELLAELCRSWPDRWDDYLYPSIWIKLTLPDTVLPSHMTPFELLFGRKPGTTLDSL--VPLTDETGAEG 1264          
BLAST of mRNA_P-littoralis_Contig1033.13.1 vs. uniprot
Match: A0A6H5JF54_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF54_9PHAE)

HSP 1 Score: 167 bits (423), Expect = 2.680e-40
Identity = 85/193 (44.04%), Postives = 119/193 (61.66%), Query Frame = -1
Query: 1876 RGRNL-IAIPQCMVADILALVHGLQGHAGVGATLSVVRDRFHWPKVV*DARQYVSSCGCTRRKRSTSRRVPMMQGRHAEPWDELIIDILAIDTESDSHNKCVLLVIDKATKFPFGFPLPSKQAIGVARKLVELCLTFGVPRMIRCDSGGEFRAEVVTHLCRWLKVDIAFGPTDHPRGQGTVERLGGWLTEVLA 2451
            RGR   IA+P+ +V  +LALVHG  GH G   T   +  +  W  +  D   YV SC C RRKR+ S ++ M+  R  + W+ L + I      SD  N  +L+V+D+A+ F   FPLPSK+A G++RKL+EL L FG+P  IRCD G EF AE++ HLCRWLK+ +  G T+HPR QG VE++   + + L+
Sbjct:  159 RGRACAIAVPKELVPTVLALVHGTYGHPGAACTTLFIERKSQWSTLKKDVLVYVLSCKCRRRKRAWSTQLLMIPARLLQRWEVLEMGIQDPKVPSDKGNHHLLVVVDRASTFLTAFPLPSKKATGLSRKLLELLLIFGLPFSIRCDPGSEFTAEMMQHLCRWLKMPLNHGATNHPRAQGAVEKVSNVIHDRLS 351          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1033.13.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KEH2_9PHAE1.020e-9356.97RNA-directed DNA polymerase n=1 Tax=Ectocarpus sp.... [more]
A0A6H5JMP6_9PHAE2.130e-8652.75Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JV25_9PHAE2.400e-8067.86Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KFK7_9PHAE3.280e-6753.68Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KNP4_9PHAE1.070e-6449.38Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KZY5_9PHAE7.160e-6465.54Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5K9B2_9PHAE2.880e-6265.29Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5K3V4_9PHAE6.450e-6046.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J7F8_9PHAE6.640e-5858.88Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JF54_9PHAE2.680e-4044.04Integrase catalytic domain-containing protein n=1 ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1033contigP-littoralis_Contig1033:56501..74854 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size5592
Hectar predicted targeting categoryother localisation
Exons2
Cds size360
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789371.3886404-UTR-P-littoralis_Contig1033:56500..597781680789371.3886404-UTR-P-littoralis_Contig1033:56500..59778Pylaiella littoralis U1_48UTRP-littoralis_Contig1033 56501..59778 -
1680789371.4087553-UTR-P-littoralis_Contig1033:60138..617991680789371.4087553-UTR-P-littoralis_Contig1033:60138..61799Pylaiella littoralis U1_48UTRP-littoralis_Contig1033 60139..61799 -
1680789371.417848-UTR-P-littoralis_Contig1033:74561..748541680789371.417848-UTR-P-littoralis_Contig1033:74561..74854Pylaiella littoralis U1_48UTRP-littoralis_Contig1033 74562..74854 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789371.3988023-CDS-P-littoralis_Contig1033:59778..601381680789371.3988023-CDS-P-littoralis_Contig1033:59778..60138Pylaiella littoralis U1_48CDSP-littoralis_Contig1033 59779..60138 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1033.13.1prot_P-littoralis_Contig1033.13.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1033 59779..60138 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1033.13.1

>prot_P-littoralis_Contig1033.13.1 ID=prot_P-littoralis_Contig1033.13.1|Name=mRNA_P-littoralis_Contig1033.13.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=120bp
MSTLSHLQRWVTTSALNSPPLSHRIMRGTPNVRHNSTSLRATPIACLDGR
GKPKGNFVALSITSSTHLLWESDSVSMASISIMSSSHGSACRPCIIGTRL
LVDRFLLVHPQDDTYCLAS*
back to top

mRNA from alignment at P-littoralis_Contig1033:56501..74854-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1033.13.1 ID=mRNA_P-littoralis_Contig1033.13.1|Name=mRNA_P-littoralis_Contig1033.13.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=18354bp|location=Sequence derived from alignment at P-littoralis_Contig1033:56501..74854- (Pylaiella littoralis U1_48)
AAACAAAACTCTGCCCTGGCACAGAGTCTCACTCGTACTGATGGTAGCGC ATACAGCAGGTAGATCAGAAGTTGGCGTCGCGGTCGTCGCGTGCTTGGTC GCGTGCGAGCGTGATGGAAGTGGGCAGCAGCGGGGGGCCAACATGTCCCC GACATCCCAGAACGCGAAAACGTACTACGAAACCCAGGTTGGTTGCGGAT CGCTTGGCGACACCCCGCTGCCCAATACTGTTTTTAGAATGGGCGCTGTT CTGCCGTCATCCAATGGTTGTTTGTTCTTGTCATCTACCATTGGCGGCGG TAGTGAGCTAATGTGAGAATCAACAACAAATTGGGGGTCTTAACCCGATC GAAGGCTTTTTCTGAACGGTGTGCCTCGCGCACGAGGCTGGTCAGACCAA ATACTACCGAGGCAACCAACAGCAGTGCCACAGAACATAGCATAGAGGTT TGCCGTTGCACCAGGCAAGCCAATGTTAGCACCACACATGACTGCGCAAC AAACAAACCCACCACTTTGCATGATAGATGATGACGACCCACATTTCATT GTGCACAACACACCATCCGACACAGACAGGCAGGTCACAGGTCACGAGCA CGAAGCCGCCTCTCACAGCCCTTGGCAGACAGACACATGACACAGCAGCA GTCTTGAGTGCATGAGCCAACACACATACACACACACCACACACATCTAC AAACGGGGTGTCTGTCAGCATCAAGGCTTGGTGCACAGAGCCCACGACCT TGCCTTGCATGCGAGAGGACGCACATGATGCGTCCAAGTACTGCTGTACA TAATGCTGTACGGCGTAGTCTGTACAGCTGTATGTTTTGTTGTTCTGTTT TACCCGTCGTGTCGTCATCATCAGAGGTTTGCATTCTGCTGGCGTTTACA GGTCTTCATAAGAGCCTTTTCATCTATTTCGTTAATAATATGGCTCGAAG GGTTTTTCGGAAAATCATACCATGATAATGATTTCAATAATGATTTTCCG ACTTTCGTTATCACAGGGCCTTAGGGCCCCGCAACGTTTTGACAGAAATT GGGAAAGAACGCAACACCGCCGGCGGAGTTTCGCCGCAGCAGCAGGCGAA ACATTGAAGCATACCTCCGATTGCAGAAGGCGAGAAAAAATTCTAGGAAC CTTTTTAGGCCCTGTGTTAACGAAACTCGGAAAATAAAAAATATAAATCA TTCATTGAAACCATCAACGTGTTTTGAAAAACAAAATTTTCATGACTAAC GACCAGTTCGGAGCCCCAAATGTTTCTCCGGAAAATGATTCCGACGACAT TATGCTCGAATCTGAGCAAATCAAACCCGGCCGGATTTGCTCGATTTTTT TGTTCAACTTACCTACGGTACCGGCCCGCTAATAAGAAAGCTCCTTTGAA GAAAGTGAGCCTGAGATTTTCAAAATAATAAGAAAGTGCCCAGCCTGGGC ACTCCCTTGGAAATAAGAAAGTTGGCCCCTCTGCCAAGGCTAGCCTGAGA TGTCATGCCCACCAATCGTGGCGCATGTGCAGCTCCACATCTCCGCACAA ACTGTAACTACTGTAGATTCGGATCCAATATGAAGACCCCCTCCCCCCCT CTTTCTGAGATTTTTGGACTATGCATGTGCACGTACAGTAGTGTTTTGCT GGGCCCCCACCCGCCGCTGTGTTTTTACACATGTTTGCGTCATGGACGCT GCGGCTGTGCTTGCGCTGAAATCGAAGCTAGCGTCGTTGAAACACAAAGG GGCTTTGACCACTGAGCAGTTCAGTCTTCTAAAGGCGAAAGCGAAGGATG GGTTGGTAACTGAGCAAGTGTTGCAGAATCTCTCCAGTCTCTGGAACCTG CGGTGTGATGGCTCCGTCGAAGAAGAAGAGTATGAGGAGGACCTGCAGAT GATCTTCAAAGAGCTGGCACCCAGAGAGAGAGACTCGGGGGCGGAAGAAC CCACCGCTATCCAACGGGGCCGTCTCGCTCCTGCTGCAGTTTCTCGTCGC CCGGCCTCGAAGTGGGAGAGGGAAAAAGCGTCACAGCTGTCAAGATCCGC CGCTTCTGCACATCAGCACATCATTACCTCCTTCGTCAAAGGATCCGGCG GGCCGGTGAGTTTGCAAAATAAAAGCTCGGCTGCCGCATGCCTACTGTAC GGCGGAATTTTCCGTCTAACCGCTGCTATCCGAATGCTGTGTCACTACTG GGTTTCTCCTTTCGATCTCGTCTGTCGCAGATTGAGCGCACTCGGAACGA TGGGTCTGTTGAGCTTGTAGCGGGTGTTGTGGCCACCCCACTGCCCACCA CTGGCGTACCGACTGTCCAGTGCCCCTACTGCCCCAAGAAGTTCATGTGC ACCCAGGCATCCGCGATCCACGTCGGAATGCGCCACCCTCAAGCCAAGAA GGACGAGGGGGAGCGGCTTCTAAAGTTGCTGCTCGAACCGTCAGCATCTG TCACCAAGATGCCATGGGAGGGAGTGGGTATGGGGCTGGTTTGGGTCGCT GATTTCAAGACGGGGCGCGCGGAGTTCGGCATTCAGCAGAAAACCACACC TATCGACGATGGGTTCGCCACTGACGACGAGGGCAAGGGAGAGGGACGCC GCGGTGCGCTGGTGCGAAAACGGTCCAGCTACCGACAAAAGGCTGTGGCG ATCGAGCGCTTGAGGGAATGCCAGCAGCAAGCGGCGGAGATTGAGGAAAA GTATCACATGGGGCCGCTTCATTTCGCGGCACAGGTGGCCGGCGTTCCAC AATATCATCTACACAAGTGGGCTGGCGACGAGGCAGTCATCGTTGGAAAG GCAGCTGAGAAGGTGACCAGTGGCCTTCTGGGAAAGTCTGCCAAGAGGTC GTGGTTCCCCAAAGCCGAGCAAGCTCTATACGGCCTATACATGGCAAAGC GTCGGAAAGGCCTCAAGGTGTCGACACTCTGGCTTTGCACGATGATGGCG CAGGAGGTGAAGAAGCACTATCCGGACGATCCGCGGAGGCTGATATTCAA GCCGTCGTGGCGCTGGGCGGGAAGTGGGCAAACAAGCGCAGCATCGTTAA GCGGCGACGGAGCAACTCCAAGAACAAGAGCGTCGAGCAGCGCCTCCCCA AGATTGGACGGTTTCTCAAGAAACTGCGGGCTCTAATGCAGTGTCCGCCG CCGGGGCAGCGTGCACCTCCGGTGCCGGCACCAGCTGCTGCAGGGGGTAG CGGGGCATCTGCTGCTGGGGGAAGTGGGGCAGCTGCTGCAGGAGGCAGCG GGGCCGCTGCTGCGGGGGGGGGCGGGGCATCTGCTGCTGGGGGCAGCGGG GCGACGCACGCCTATGCTGATGCCAAGTTCGGGCGGTTCCCCCTGCGGAG ACGGGTGAACGTGGACCAGGTGTGTGCATTTGTCAGAAGTTTGATTTGGC TCTGTTCTTGTTAAGCTTCGGCACCCGCAGCTTGTACATAGAACAGTGTA TGCATTCCGACCGCACACACAAAAAATCGCGCCCCGCTCGTACCTCACGA CCGCTTGTTTTTCTGCAGGTGCCGCTGCCATTCGCCAACGGCTTGGTCAC CACTTGGGCCGACAAAGGGAGCATGCGTGTTCGTGTCTCTCAACCGTCGG CGGGCCTAGACAAGCGGCAGTGCACCATGAAGCTTTGCTTCGGTCCAGGC GATGTTTTGTTCAGGTGAATAAAAAACAGTATAAGCGGTACAACTTTGTA CGAAGTACTTTTTCTACGCGTCGCCAGCCGCGTGTTTTCTAAGGTTTCTT TTGCATCTTAGCTCTATTGTGTCGAACTAAAGTTGGAAGGGCGGTGTAGG AACCGGATACTACCCTGGAGATAACGGGCCCGACGAATCGAACTTTTTTC GAAGAATTGTGATATTTTGTATCGCACATTGTTTTTGCACCAACATGCCG CCCGGCCTCAACTGCTCAAGCGTATTTCCCCTGTCCCCTGCCCCCTACGT ACCGTAGACCCGGCATCATCTCCCGTGGCACAGGCACACGGATTTCAGCG GTGGAAAAAGCGGCGTGGCACAAAGGGGTAGACGTCTCGTTTCAGGCCTG CGCGTGGGCTGACTCCAACTACTGTGCATCATGGGCGGCCAGCACCTACC GCGACGGGGTAGGCGGCTCTTCGCTAGTAGTGCCCGAGGAGCAGTTCATC TTGTTCGCCGATAACCTTCACGGCCAGACTACCGACGAGTTCAAAAGCGT GCTGATGGAGAAGTGCAACACGCTTCTCTGGCTTCTCCCCACCAAGTGTA CCGACGAGGTCCAGCCCGTTGACGCCGGCTACGGACGACTTTTCAAGGTG TACGTGGGTAAGTTCCTCGACAAGTGACTGCTGGAGGCGGATCACGTAGA GTTGTGGGAGTCGAACAAGCTGACTGCATCGCAGCGAAGGATTTTGATCA CGCAATGGGTCGGTGAAGCAGCGAAGAAGATCGACGTTGACATGGGCGTC GAGTACCGCCGTCGCCTTTTCGAGAAGACTGGCTTGGCGATGACCGCTGA CGGCAGCGATGACGACCTCATCAACCTCGAAGGTGTCGAGGGCGTGTTCT CCTTCATGGACATGGACGTCACCCCGGAGCCGCTGGAGGATGTGCTTCCG GTGTCACCTGCTCCTGCCGACGAGGAACACCCTGCCGGTTCAAGCGATGA GGACGACGATTCGGATGGGGAGGAGGGGGTGGAGGTGGTACGCACGACGA CCTGGCGACGATAGACATCGACGATGATCTCGACGAAGGCGAGGAGCCCT TGTCTCTCGAGATCCCAGCAGGATATTCCCTGGAGAGCCAAGTGCCTGCC GCGCTCACCGCAGTACTAGTCAGGCGATCAATAGTGCTGCGGAGGGGTAT CGGGTGGCTCCAGGGGACCATCACAAGACAGGCTCAAGTGCGCACGCGTC ACCTCTTCGACTACAGAGTGTTTTTGGAGCGCGACGGCAGCACACACAGC GTGAAGCTACCATTGGCGAAGTACTCGGTGGACGGGTCGGCGGGCGAGGG ATCATGGGCGCTTCTGAAGTGCCCTGCTTCCACCGCAGAGTCCGATCAAG AAGAGGAGGAAGAGGACGAAGAAGAAGAGGAAGACGAAGAAGAAGAAGAG GACGAAGAGGCGCCTGTGAGGGGGGGAAAGGGAAAAGGCCGGAGGAAGCG CAAGCGCAACACCCCACACGCCACAAGATCTAGTGGCAGGGATCGCGTGG TTAACGTCCGACTGGCCGACCAGGGTGTTTGAAGTGTGTTTGTGCTTATT CGTGCTTTCGTCCCACCTATTCTGGCGTCGGTCTACACCTTGTATTGACG CCTCGGCCGGGGTCGCAACAGGAGGACGCAAATACAGGGGATTAATTTTT ATTAAGTACAAATAGCTTTGGTAGGGGGGTCCACTAGTAGTCTCGAATTT TGCAGAGGTAGCGTGCGACTGGTGAGCCACCACTTTTCCGAAGTACTATT TCCAGGCTGTATTTCCAGGCTAACTGGTTGGAGTGGCGAGGGCGAGACAT GTGTCAGACGTCTATTCGTTGGTAGACCACGTACGGCAGAAGGGGCCAAG CAGATGTGTATGTACAACAAAGCTTTTTTGAAGGCGAAAAATAAGAAAGT GCCAAATAAGAAGGCGTGCTTTCGCGCTCGGAATGAATAAGAAAGTCAGC CTGAGCCGGATTACTGGTTTCTTATTAGCGGGCCGGTACTGTAGTCGGTG CTCCACTGCCTCAAGCAGAGAAGCTATGATGAGTCTTGTTTAACACGTTT TATTAGGACACAGAAACAGAAAAAAGACACATCGATATGCACCGCTATTC AACCTTTTCTTTCCTGCGATGCTCATGGTGGCCTTTGCTGAGATCAGCAA GGTTGCGGAGGTGATGGCGGACATGCCCAAGGTCAAGAGGAAGGTGACGA AGGGGAAGGGGAGGAACGCCCGACTGGTGGAGGCAGTGAAGTCCATCTGG AGTATGCTCTACGCCGACGACGCCTGTATTGTATCTCAATCACCTGGGAG CCTTGAGAAGATGATGTCGATCATCGTACGTGTGGCCGGGCGGTTTGGGC TGTTGGTGTCAGAACCCAAGACGGAGACCATGCGTATGCTCGCGAAAGGG ATGGAGGCGTGCTCGTTCACGATCGACGGTGCCAAGATGGTCTTCAAGCA GAAGAAAGACTTTGTCTACCTCGGGGGTAAGATTCGTGAGGACGGTAGCA TTGAGGGCGAGATTAACCACCGAGTGCAGCGAGCGCACGCCTGCTTCCGG CGCAACAGCCAGGCAATGTACGGCCGCCCGGGGGCCCCTCTTCGACTAAA AGTACGACTCCTCCAAGCTGAAGTCGTTGAGACCCTACTCTACGGGTGTG TCACATGGAATCTGAAGCCAGCGGAGTACCGCAAGCTTCGGTCAGCCACC ACTTCTTCCTCCTTCGCTGCATCGGATGGAAAAAGAGGGAGAGAACAGAC CGACCCCTCTCCTACGCCAAAGCCCTGATCACCGCGGGTTGCAACGAGAG CGTTGAGGCCACCGTGCGCAAGCGGCGACTGTGCTTCGCAGGATTCGTTG CGCGCATGAGAGACGAGAGACTCCCGAAAATTGCTCTTTTGGGAGAATTG CAGGGGGGAGCGAGGTATCTGGGGGGGCAAGAGTTTGACTGGCTGAGGCG AATGCGGGAGGACCTCGAAGCGTTCGACATCGTGGTCGACAAAAGGAGGG GTGAGAGGCAAGTGCCAAGAGAGCTGACGAGTGGTACGACAGGATCGACG AGGGTGCGCGGCGGTTCACGGACGAGTGGCTCAAGAAAGAGGGAGACCTA TCAGAGACACGTCGACGGAAAAGAGAGAGGGACGCGGGTGAGAGGCAGGC CTTGACTAAAAGAGGGAGAACGGATGGCGGGGATAAACGAGAGGAGGAGT ACGGGGGGGCACAAGGGCAGCGGGGTAGTGGGGTTGGAGTTGCACAGCAC AAGAAGAAGCAGTCCAATGCCAAGCTACGGGGTGGCCGGAGTGGAAACTC TGTAGGGCGGAGTGGTGGTGTAGCTGCTGCCAAAGATGTGGGGCAGAAAC AACTGGGTACGGTGGTGCCCGTAGCAGGAGGCATGAGTGCGACTGAGGAG AGCAAGCGTGAACAGGCAGACCTCGTGGCAAGACACGTTTGCGATCGATG GCATGCCTTTCATTTTATTTTTATCACCCCCCCCTCCCCCCCGACTTCCG GTACTTCCGATCTTCTTTTCCCTTTTCGTTCCCCTGCTTCCTCTTTGTTC GGCCCTGTTTGTTGTGTTTGTCTACGAATGCACTCCCTCAGTCTCTGTGC TCTCCCTGTATCTTCTTTTTTATTTTATTTTCTGTCTTTCGTCTGTTGAT CATGTAGTTACTGGACCATCGCCCTGGTTTGCGTTTGCCTTGATCTGTGA TGGCCCTGGGCCCTGGTTCGATGTACGAAGTACTTCGAAGTATGTGGTTA TGGTTGAGGTTTGTCTTGGTTGTTTTTTGTTTGTCGGACTGTTTCCAGTT TTTGTTTTTCTTTCGAGCCTGTAAGTTTTTTTCTGTATTTGTTTGGTATT CTGGCCACCACAGATGGTACCCCAACGGTACCACGTCTGATCTGACTGTG GGTGATCATAGTCCATACATTTTATTTTTTATTTTTTTCCTCCTAGCACG ATATGTGCCTGGTTTGTGACCACGGGCTAGACTGCGGCGGTCGTGAGCTA ATGTGAGAATCATCAACAACAACAACCGATGTGTTCCCAGAAAGCACAGC AAACACCTCTCTGCCCGTGTTCTAGGTCTATTCGATTTTTGAGCCGCATT TTAGATTCTAAACTCGGATTTTTTCGATTCTACCCTTTCCTTTAGCTTTC GGAATAGTAAGGGCAAAATCGAAAATCTGCTGGATGCGCCGCATGTGCGG AGGGAAGTTTGGCCAACCGTAGTTTTTTAGATTTCGATTTTCGATTTCGA TTGGGTTTTTGCGGACAAGAGCCACCCTGGACAGCCCTCTCTCGCTCTTC TTTTCTGGAATTAATTACATTTGAGGAATGAGTATGTTCGCAAGCCGTAT GTTTTTGTACGGTATGCTGTATGCATGTTTACATATGCCCACGAAACCAG CATCCCTGCCCAGCCCTGCTTCCAAGAGGTCACTTTCTTCGATATGGTAG TAGTCAGCATCCACAACCAAGCTGGGAGCCACAGCTGTACCAGGCCTTTT AAATCGCTGACGTCGCGCGACTGCTGTGTCATGAGCTCCAGTTATAGCCT GTGATGCGAAGAGCGCCAACCACAGCTCGTGGTCGTTATTATTACGAAAT CTTCTTCGAAACCATCAAACCATCAAATCACCACCATCGCCATGCCAAGG ATGATGCAAACAGCACGAATATAGATCGTAAACACTCAACACATGATGTA ACGTGTGTCACACAGCAAGACGACCACCAAATTGTCTTGTTGAGCCTGAT ACCCTCTGGGGAGCTGCAACGGTACATTATCTGTTGAGTATGGAAACACT GGTACAGTACCGGCCCGCTAATAATAAGAAGCCAGTAATCCGGCTCAGGC TGACTTTCTTATTCATTCCGAGCGCGAAAGCACGCCTTCTTATTTGGCAC TTTCTTATTTTTCGCCTTCAAAAAAGCTTTGTTGTACATACACATCTGCT TGGCCCCTTCTGCCGTACGTGGTCTACCAACGAATAGACGTCTGACACAT GTCTCGCCCTCGCCACTCCAACCAGTTAGCCTGGAAATACAGCCTGGAAA TAGTACTTCGGAAAAGTGGTGGCTCACCAGTCGCACGCTACCTCTGCAAA ATTCGAGACTACTAGTGGACCCCCCTACCAAAGCTATTTGTACTTAATAA AAATTAATCCCCTGTATTTGCGTCCTCCTGTTGCGACCCCGGCCGAGGCG TCAATACAAGGTGTAGACCGACGCCAGAATAGATGGGACGAAAGCACGAA AAAGCACAAACACACTTCAAACACCCTGGTCGGCCAGTCGGACGTTAACC ACGCGATCCCTGCCACTAGATCTTGTGGCGTGTGGGGTGTTGCGCTTGCG CTTCCTCCGGCCTTTTCCCTTTCCCCCCCTCACAGGCGCCTCTTCGTCCT CTTCTTCTTCTTCGTCTTCCTCTTCTTCTTCGTCCTCTTCCTCCTCTTCT TGATCGGACTCTGCGGTGGAAGCAGGGCACTTCAGAAGCGCCCATGATCC CTCGCCCGCCGACCCGTCCACCGAGTACTTCGCCAATGGTAGCTTCACGC TGTGTGTGCTGCCGTCGCGCTCCAAAAACACTCTGTAGTCGAAGAGGTGA CGCGTGCGCACTTGAGCCTGTCTTGTGATGGTCCCCTGGAGCCACCCGAT ACCCCTCCGCAGCACTATTGATCGCCTGACTAGTACTGCGGTGAGCGCGG CAGGCACTTGGCTCTCCAGGGAATATCCTGCTGGGATCTCGAGAGACAAG GGCTCCTCGCCTTCGTCGAGATCATCGTCGATGTCTATCGTCGCCAGGTC GTCGTGCGTACCACCTCCACCCCCCTCCTCCCCATCCGAATCGTCGTCCT CATCGCTTGAACCGGCAGGGTGTTCCTCGTCGGCAGGAGCAGGTGACACC GGAAGCACATCCTCCAGCGGCTCCGGGGTGACGTCCATGTCCATGAAGGA GAACACGCCCTCGACACCTTCGAGGTTGATGAGGTCGTCATCGCTGCCGT CAGCGGTCATCGCCAAGCCAGTCTTCTCGAAAAGGCGACGGCGGTACTCG ACGCCCATGTCAACGTCGATCTTCTTCGCTGCTTCACCGACCCATTGCGT GATCAAAATCCTTCGCTGCGATGCAGTCAGCTTGTTCGACTCCCACAACT CTACGTGATTCGCCTCCAGCAGTCACTTGTCGAGGAACTTACCCACGTAC ACCTTGAAAAGTCGTCCGTAGCCGGCGTCAACGGGCTGGACCTCGTCGGT ACACTTGGTGGGGAGAAGCCAGAGAAGCGTGTTGCACTTCTCCATCAGCA CGCTTTTGAACTCGTCGGTAGTCTGGCCGTGAAGGTTATCGGCGAACAAG ATGAACTGCTCCTCGGGCACTACTAGCGAAGAGCCGCCTACCCCGTCGCG GTAGGTGCTGGCCGCCCATGATGCACAGTAGTTGGAGTCAGCCCACGCGC AGGCCTGAAACGAGACGTCTACCCCTTTGTGCCACGCCGCTTTTTCCACC GCTGAAATCCGTGTGCCTGTGCCACGGGAGATGATGCCGGGTCTACGGTA CGTAGGGGGCAGGGGACAGGGGAAATACGCTTGAGCAGTTGAGGCCGGGC GGCATGTTGGTGCAAAAACAATGTGCGATACAAAATATCACAATTCTTCG AAAAAAGTTCGATTCGTCGGGCCCGTTATCTCCAGGGTAGTATCCGGTTC CAACACCGCCCTTCCAACTTTAGTTCGACACAATAGAGCTAAGATGCAAA AGAAACCTTAGAAAACACGCGGCTGGCGACGCGTAGAAAAAGTACTTCGT ACAAAGTTGTACCGCTTATACTGTTTTTTATTCACCTGGAACAAAACATC GCCTGGACCGAAGCAAAGCTTCATGGTGCACTGCCGCTTGTCTAGGCCCG CCGACGGTTGAGAGACACGAACACGCATGCTCCCTTTGTCGGCCCAAGTG GTGACCAAGCCGTTGGCGAATGGCAGCGGCACCTGCAGAAAAAACAAGCG GTCGTGAGGTACGAGCGGGGGCGCGATTTTTTTTTGTGTGTGCGGTCGGA ATGCATACACTGTTCTATGTACAAGCTGCGGGTGCCGAAGCTTAACAAGA ACAGAGCCAAATCAAACTTCTGACAAATGCACACACCTGGTCCACGTTCA CCCGTCTCCGCAGGGGGAACCGCCCGAACTTGGCATCAGCATAGGCGTGC GTCGCCCCGCTGCCCCCAGCAGCAGATGCCCCGCCCCCCCCCGCAGCAGC GGCCCCGCTGCCTCCTGCAGCAGCTGCCCCACTTCCCCCAGCAGCAGATG CCCCGCTACCCCCTGCAGCAGCTGGTGCCGGCACCGGAGGTGCACGCTGC CCCGGCGGCGGACACTGCATTAGAGCCCGCAGTTTCTTGAGAAACCGTCC AATCTTGGGGAGGCGCTGCTCGACGCTCTTGTTCTTGGAGTTGCTCCGTC GCCGCTTAACGATGCTGCGCTTGTTTGCCCACTTCCCCGCCCAGCGCCAC GACGGCTTGAATATCAGCCTCCGCGGATCGTCCGGATAGTGCTTCTTCAC CTCCTGCGCCATCATCGTGCAAAGCCAGAGTGTCGACACCTTGAGGCCTT TCCGACGCTTTGCCATGTATAGGCCGTATAGAGCTTGCTCGGCTTTGGGG AACCACGACCTCTTGGCAGACTTTCCCAGAAGGCCACTGGTCACCTTCTC AGCTGCCTTTCCAACGATGACTGCCTCGTCGCCAGCCCACTTGTGTAGAT GATATTGTGGAACGCCGGCCACCTGTGCCGCGAAATGAAGCGGCCCCATG TGATACTTTTCCTCAATCTCCGCCGCTTGCTGCTGGCATTCCCTCAAGCG CTCGATCGCCACAGCCTTTTGTCGGTAGCTGGACCGTTTTCGCACCAGCG CACCGCGGCGTCCCTCTCCCTTGCCCTCGTCGTCAGTGGCGAACCCATCG TCGATAGGTGTGGTTTTCTGCTGAATGCCGAACTCCGCGCGCCCCGTCTT GAAATCAGCGACCCAAACCAGCCCCATACCCACTCCCTCCCATGGCATCT TGGTGACAGATGCTGACGGTTCGAGCAGCAACTTTAGAAGCCGCTCCCCC TCCTCCTTCTTGGCTTGAGGGTGGCGCATTCCGACGTGGATCGCGGATGC CTGGGTGCACATGAACTTCTTGGGGCAGTAGGGGCACTGGACAGTCGGTA CGCCAGTGGTGGGCAGTGGGGTGGCCACAACACCCGCTACAAGCTCAACA GACCCATCGTTCCGAGTGCGCTCAATCTGCGACAGACGAGATCGAAAGGA GAAACCCAGTAGTGACACAGCATTCGGATAGCAGCGGTTAGACGGAGAAC AAAGCAGCGCAAGCGTGCAGACTTGATGCTACGGAGTGCACGCGGTGAGA AAACATACGGAAAAATAGAAGCATAGCTAACCTCTTGCATCATGGTGTGA GTGGTACTGCTGTAGACTACAGTGGTCGATTGAAACACACTTTTTTTCAT GTTTCAACGTCTGCGGCGCAGCTACGCGACTGAAAATTCCGCCGTACAGT AGGCACTATGCGGCAGCCGAGCTTTTATTTTGCAAACTCATCGGCCCGCC GGATCCTTTGACGAAGGAGGTAATGATGTGCTGATGTGCAGAAGCGGCGG ATCTTGACAGCTGTGACGCTTTTTCCCTCTCCCACTTCGAGGCCGGGCGA CGAGAAACTGCAGCAGGAGCGAGACGGCCCCGTTGGATAGCGGTGGGTTC TTCCGCCCCCGAGTCTCTCTCTCTGGGTGCCAGCTCTTTGAAGATCATCT GCAGGTCCTCCTCATCCTCTTCTTCTTCGACGGAGCCATCACACCGCAGG TTCCAGAGACTGGAGAGATTCTGCAACACTTGCTCAGTTACCAACCCATC CTTCGCTTTCGCCTTTAGAAGACTGAACTGCTCAGTGGTCAAAGCCCCTT TGTGTTTCAACGACGCTAGCTTCGATTTCAGCGCAAGCACAGCCGCAGCG TCCATGACGCAAACATGTGTAAATGTTATAGATCGCTAGTAGCTGTCTTT GGAAAGGCAAGGTAGTGTCAAGGCAGACTGGCCTTGTGATCTCTGCGCAT GCAAGAGATGGACAACACTGCTGTTGTGGTGTAGAACACTGCTGCTATTG TCAGCAAGAATACCAACGAGGTACAGCAGCACCTGATTCCTGGACACGTA CTAGCTGATCCCCGAGAACGGAGTAGCTCACGTAAGCGAAGGTAGCTGAA AGCTTGGAGGATGTAAGAATCCTGGGTGTGTATGTGAAGTGCTTTGTTGT TAACACCGAGCCAGGCCAGATCGGTAAGGTATAGCTCTGGACTCGAGGGG GACAGTCTGCCCTTTCCTCATGGGGGTACCGTGTATGACTCCAACACGTA CCCCATCCTAATGAAACCGCCACTGCCACGAAGCGGCCTAAACAGATACG GTCCGACATGACAGCCTGACCATAACATCCCCCTAGTATAATGCGCAGGC ATACAAGAATTATGCTAAAAGTCACGCGACTACTCTGTGAGAGGCTGATA GCTGCGAAGCTAACTGCGAAATATCGTGCCAGAAGTTAAGTAACTAATCA TGACCAAACGGCCGTCACATGTGATGGGAACCCTTCATGAAAAACCCACC CATACCGCTTGGTTCAAACGTAATTAGTTACCCGACACGTATCACCCACA AGTAGTTCTGTGCAAACAGACCCGACCGGGCAAGATTGCACTACAAAATC CAACAGCATCCCGTCGGCGCTTCACGTCGACACCTTTCCACGTCCAAACT CCGCCACGCGAAGATCACATAACCCCAAATCCCCCAATATATGCGAATCC CAAGATCATCACTACGGATTGGTAGGCTCCTGTCGCCTCATAAGCAGGCG TTTCATCTCGGTACGGTTGAGCTCCTCCCAATCGTTGCTGGGGTAGCGAA TGCGCCAGTAGCGGTCTTTGTAGTCAAATACTTGACCCTCTTGAATCAAC CCTGAGCCAAAATCCTTCCGAATCCGGGTACCTATAGGATATAGGTCCAG AGCTTGTTTGCGGGGCAACGCAGCAATTCGTCGCGAGGGGACAGCGGGAA CGGCGGCGGTGGTCAGTGCAGACGGGGGTTGATAGAGGTGCCAAAGGGCT ATGAACCCATCCAGTTGCAGTGGTGAAAACGACTTCAACACTTCGTCTTC CGCCAACCAATCCGGTACCTCTCCTGCTAGTGTTCGACCTCTGTATTCCC AACGTTCTCGGCCGGTGGTCGAGCGAACCTTACGACAGTCTACCAAGGTG ACTAATGGAGTGGGATCGAGCGCGGTGGATGTTGTCTTAAAATCCCTGTC CCAGGCAAACTGTGCGAATTCGTCTGATAAAGAGTGTCTAAGTGCAAGCG GTCGCAGGTGAAACTGTTTGATGTCTTCTGTGGAAACTGATCTTGCTCTG TTCTTTCTACCCCGCATCGTTACGCCCACGCTTATGCCCGTGAGTGGTAC TTCCTTCACTCTCCACGGGCCCGTGTAGAACTCGTGCTGCAGTTTCCTGC CGCTGCGGTCGCGGTGGCGAGTGCTAGGTGCCTCGCGAACCAATACTAGG TCACCCACTTCGGCTGTGACGCCTGCCGAAGGACGACGGATGGTCTCGTT CGACCGAGCCCTCGAGGCCACGCTCAGTTCGTGCCGCTTCTCGAGTGCAA GACGGACCTCCCACAGGTTCTGTTTACGTTGTTCTACAAAGTTGTCTCGC CCTCCGGGTGCGTTCGGCTGTTCTGTGGCAGGTACCAAAGAGTCTAGAGA CGTGCGCGGGGGCGTCCGAAAAGCAGCTCGAAGGATGTCATGTTGGCATG TAGAGACGCGTCAGGTGAGGTGCGTTTGACCCATAACGCTTGAGAAACGC ACTCATCCCATCGCTTGGGCCAGGCACTGCACAGTTCAGCCAACACTTCG GTGAGCCATCCGCCCAACCTCTCTACAGTTCCTTGGCCTCTGGGATGGTC TGTCGGTCCGAATGCTATGTCTACTTTGAGCCATCTACAGAGGTGGGTTA CCACTTCGGCTCTAAATTCTCCACCGCTGTCGCATCGGATCATGCGGGGT ACTCCAAACGTCAGACACAACTCTACTAGCTTACGAGCAACACCGATTGC TTGTTTGGATGGAAGAGGAAAGCCGAAGGGGAATTTCGTCGCTTTATCGA TTACGAGTAGCACACACTTGTTATGGGAGTCGGATTCTGTGTCTATGGCT AGTATATCGATTATGAGTTCGTCCCACGGCTCCGCATGTCGACCTTGCAT CATCGGCACCCGCCTACTCGTCGATCGTTTCCTCCTCGTGCATCCGCAAG ATGACACATACTGTCTGGCGTCTTAGACTACTTTAGGCCAGTGGAAGCGG TCGCGAACTACACTCAAAGTGGCCCCTACTCCTGCGTGCCCTTGCAACCC GTGTACAAGTGCTAAAATGTCCGCTACCATACACTGTGGAATAGCGATCA AGTTCCTACCGCGCACATCGACAAATGAACTATATCGTTTTCGTCCACCC AGTACTCCCCATGATCACCCTGCATTCCTACTAGCTTGTTTTCTCCCTCA ACTGATTTCGAACCTGCACCAGAAAGGCGTCGTCTCGTTGCTGCACAGCC AGCCTGGCAGGGTTGGTCAGGATTGTGACCGCGCGGTCCACCGGGACGGA GGGGCTTGCTAGCTCCTCGGCTGAGCGTGATCCTGGAACCTCCCCCGAGC TGAAAGGACCTCGCTGACGTCACCGCCGCGACCGAGTGTGCATATATATC GTGACCGTTAAAAAGACGACAACTCTCTAGTTGGATCGATCCAACAGGGC GGCAAGGCAATGTAAATCGACCTACACGACACCTTCCCCTCTTGCGTAGA CTAGAGCGCGACTGAGTGATATCTCTGACTCTGACGTATCAAACTACGCG AGGTAAGCGAAATATCATATCCAACCTATGCGACCTGTGCATGACTGCGC ATAACTCGGAACAGTTTCGTGTGCTGATAGTTTACCCAGCATTTAGGCTT TGGCTCTGTGCACCGTGCACAATGTGGTCGAGACCGCAGCATGTTGCATA CTTGCTGGCAGGATAGACACCCTTCGCCCTGCCCCCCTGCTGGAAAAGCA TTACAAATAGATCTATGCCGTGAAGTAAAATGGAGCAGATTGATGTTAGA AAGTAATGGGGAAGCGAACGAGAACGAACACCGACAGACGCGGACTACAG CAAAACAGAGCAAACGACAGCAAAAACAGGCGCGTGCGGGCAGCAGGGAA CAGCAACAGTAGCAGGCAAACGTGCGCAACCGTAGGTCACCATGTTCCCT CCAAGCAGGTGTCTCCCACGACAACGGGCAACGGACAACGTGCAAACACC GGCAGCAAACAGGTAGTAGCAGACAGCAATAGAAGGGACAGCAGCAACAA AACCGAGGCTCAACAGCAGCAGCAACACACAAGATAGTGGACAAATACCA AGCACTTCATGCGCTCGTGCTGTGCCGCGTCGTGAGGACACCAGAATGTG AGCACAGCGTCAATAAATCTGATGAACAACGTCGGCACATGCAGTATGCA TGACCCGCCAGAAAAAAAAATGTAGTGTAAGTCGCTGTATTTACCAAGGT GACTTAGAAAATTAACAGTAGAAAATTAACAGGATGGCGTCTGTGGCGTC CGGAATGGGTCATGCAGCAGCGAGAGTGGCTGTTTGGTTCATGCGGGAAG ACCATTATGGAATTCATCATGCTGCCTGCGGTAACTCGCACGGTAAACAT GGCAAGACGTGCTGGTGAGTGCCATACTTGAAACGAAGATACACGTCGGT GTCGGGACTGCCCAGGAGAGCGATTAGAAAAATAAAAGAAGGCGAGAGTA TGACATGCCGTTCGCAAACGCGACGGGATGGCATACAGAGGAATGCGACA TGTTGCTGCATGTCAGTAACAAGGACGGTGCGCCGGGCAAAAGCTCGTCC GTGAGCAGAGAAATGGAGAAAACGAGTTGGCGTGTTTAGAAGCAGTCCAC GGGTTATGATAGTCCAGGAAAAACGAGAGTGTGTCATGCCGTCCGCGCAC GTGACGGAATGGCATGCATGCTTATTCTCGCGGAAGAAAACAAAAAACCG TCATGAAAACAGCGTAGACCTAAAAAAAATGTTTACTGCGACCGAGAGTG ATGCAGGCCGTTCGCGCGAGTGACGGGCTGGCAGACACCGCTGTGATACC CCAATTTTTACGGATAACAGAGAAAAACGAGAATGAGGCAGGTTGAACAA TTCCGGGCGTAGTTGGGTATAAACCGTACGCTGGCGAAAACGTTTTTCCG GGCACAAGGGGAGAGAATGTATGCAGCGCAAAAATAAATCATATGCTATG AATATTGTTGATCGAAACCCAGGCCGTGCACCCCAATGTGCAACTCATAA GGCAGCTTTGTGTGCCCCGGGAGTAAAAACGAACAGTACTAATTTTAAAG GGACGAAAGGAGAAACCAGATGAAACATTGCAGGGAGAAACCGTAAACAG CGGCGTCGTCCGCGTACGCGTTGTCGGCGGCACCGTTGCCGACAGAACGG TGGGCAGGGTCAGCAGCTGTGACACGACGATGGCAGAGAGGCAGAGAGCG CTCGGTCAGAGGCGGTACAGCGGTGGGCGTAAATGGCCGTTTACACACAA GTCGCGTGATATAATCGCTGGAGTGTAGGTCGATCGAGTAATAAATACGC ACAAGCCTGCCGGATGTTCAGCGTTCACAGTTAGAGAGAAAAAAAAAGCG TGATGAAGGCCGTTCGCGTGAGTGGCGGGCTGGCAGACACAGATTTGATA ACCTAATTCTCTGTTGAGACGAGAGTCAAATGAGGGTGGGTAGGATTGTT TTTGAAAGAAAAACAAAAAATCTACGGGTGAGAAGAGTGAGGCAGGCCGT TTGCGTACGTAGCGGGATGGACTCACTACTGTGTACGTCGGTCGTGGAAA ACACATAAAAAACGGCGGCGGTAACCCAGTGTCTCCGCAGGATGAAAGTA AAAATGGTTACGGAGGCAAAAGAACACCAAGAGGCGATGTAGGGCGTCCG CGTGGGTGGCGGGCTGCCCTGAGTAGATGGTCATGTCTTTAGTTATTATT TTGTTTTGGTTTGTTTGAGAAAGAGAGAGAACCGAAAGTAAGGTTGTGTG TTGAAACCAGAAAAAAAAATCAACGTGACGAAGGCCTGCAATATTGCTGT TTTCAGGGTCGATACATGCACTGGTCGTGTAGCGGTTGTATGAAACTGAA TAAAGTACGAGAAGGTGTTACCACAAATGGCTGCAGCTCTCATCCACCTT ATACTTGCCTGGCATCGAGCATACCTCCACGCACGCCGGGAAAAGGTACT CTAAGAAGGTGTTTACCACAAATGGCAGCAGCTCTCATTCACCTTATACT TGCCTGGCATCGAGCATGCCTCCATGCAGTCGTCTAATAAAAGGCTTCAA CCAGAAACAATCAATGGTTGTACCACAAATGAGGAAGCATGTGTGAAATT GACTAAAGTACGAGAAGGTGTTACCACAAATGGCTGCAGCTCTCATCCAC CTGATACTTGCCTGGCATCGAGCATACCCCCATGCACGCCGGGAAAAGGT ACTC
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig1033:56501..74854-

>mRNA_P-littoralis_Contig1033.13.1 ID=mRNA_P-littoralis_Contig1033.13.1|Name=mRNA_P-littoralis_Contig1033.13.1|organism=Pylaiella littoralis U1_48|type=CDS|length=360bp|location=Sequence derived from alignment at P-littoralis_Contig1033:56501..74854- (Pylaiella littoralis U1_48)
ATGTCTACTTTGAGCCATCTACAGAGGTGGGTTACCACTTCGGCTCTAAA
TTCTCCACCGCTGTCGCATCGGATCATGCGGGGTACTCCAAACGTCAGAC
ACAACTCTACTAGCTTACGAGCAACACCGATTGCTTGTTTGGATGGAAGA
GGAAAGCCGAAGGGGAATTTCGTCGCTTTATCGATTACGAGTAGCACACA
CTTGTTATGGGAGTCGGATTCTGTGTCTATGGCTAGTATATCGATTATGA
GTTCGTCCCACGGCTCCGCATGTCGACCTTGCATCATCGGCACCCGCCTA
CTCGTCGATCGTTTCCTCCTCGTGCATCCGCAAGATGACACATACTGTCT
GGCGTCTTAG
back to top